View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18642_low_15 (Length: 281)
Name: NF18642_low_15
Description: NF18642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18642_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 21550123 - 21549860
Alignment:
| Q |
1 |
tcaaatggatacaacaatccatgtgaagaagaagcttctaaagttgacaagaagggaaattgatgagtttgtggcatcctccattgctcaaaactaccaa |
100 |
Q |
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| T |
21550123 |
tcaaatggatacaacaatccatgtgaagaagaagcttctaaagttgacaagaagggaaattgatgagtttgtggcatcctccattgctcaaaattactaa |
21550024 |
T |
|
| Q |
101 |
caggtaaaatcgaagaagaaccaccaccgttaccaacgcctccacctaacgagcttccgatatggaaatttaagtctccaacacctcccattggaccgga |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
21550023 |
caggtaaaatcgaagcggaaccaccaccgttaccaacgcctccacctaaagagcttccgatatggaaatttaagtctccaacacctcccattggaccaga |
21549924 |
T |
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| Q |
201 |
aaaaccatagtttagtcctatttcactgaggtgatctccaagatgatgcaaaggagccatgaat |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21549923 |
aaaaccatagtttagtcctatttcactgaggtgatctccaagatgatgcaaaggagccatgaat |
21549860 |
T |
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