View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18643_high_22 (Length: 237)
Name: NF18643_high_22
Description: NF18643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18643_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 41852793 - 41853012
Alignment:
| Q |
1 |
tgtgcaatgatcagtctgttctcttttatgctacatgaatgaaatgaatgatgctgttatgtcacttagctcgctttagttaatagctctcattattatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41852793 |
tgtgcaatgatcagtctgttctcttttatgctacatgaatgaaatgaatgatgctgttatgtcacttagctcgctttagttaatagctctcattattatc |
41852892 |
T |
|
| Q |
101 |
attgcgaattttcgacgatcttgtactaaacatgtgagacacaaattgtaccaatgcaaatttggagcaactacttatttgaaaataaatgctgctaaaa |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41852893 |
attgcgaattttcgacgctcttgtactaaacatgtgagacacaaattgtaccaatgcaaatttggagcaactacttatttgaaaataaatgctgctaaaa |
41852992 |
T |
|
| Q |
201 |
agtgctgaaattgtagttcc |
220 |
Q |
| |
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|||||||||||||||||||| |
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| T |
41852993 |
agtgctgaaattgtagttcc |
41853012 |
T |
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