View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18643_low_14 (Length: 371)
Name: NF18643_low_14
Description: NF18643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18643_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 17 - 358
Target Start/End: Complemental strand, 33676637 - 33676292
Alignment:
| Q |
17 |
agtatcaagtatcaagataccccgagtttaat--gatataatgatnnnnnnnnnn--tgatataatgatcatcaacattttaacacattaacatctacta |
112 |
Q |
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| T |
33676637 |
agtatcaagtatcaagataccccgagtttaatatgatataatgataaaaaaaaaaaattatataatgatcatcaacattttaacacattaacatctacta |
33676538 |
T |
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| Q |
113 |
gctactaggtgaatttcttggtcatcacttcatttttacaagttccatatattgccagttatatttaactgatcatttaatttcagtcaaaatgtaacta |
212 |
Q |
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||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
33676537 |
gctactaggtgcatttcttggtcatcacttcatatctacaagttccatatattgccagttatatttaactgatcatttaatttcagtcaaattgtaacta |
33676438 |
T |
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| Q |
213 |
acataaaaccaatcaaaaatagatatgaaataagaactttcttacatcttggataaccctatctgttgcacggatctggattaaatcagatttgttgttt |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33676437 |
acataaaaccaatcaaaaatagatatgaaataagaactttcttacatcttggataaccctatctgttgcacggatctggattaaatcagatttgttgttt |
33676338 |
T |
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| Q |
313 |
aacatgacagacttggatggggggaagtactgcttaaattgatcat |
358 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33676337 |
aacatgacagacttggatggggggaagtactgcttaaattgatcat |
33676292 |
T |
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