View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18643_low_23 (Length: 253)
Name: NF18643_low_23
Description: NF18643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18643_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 2383139 - 2383363
Alignment:
| Q |
13 |
aatatgtgcaggactaaagaagctaagaaatgatgtgaaatcttgtgaatatgaagatattcgtgtgatgtgggagatgctaaacagaaatgaatcatta |
112 |
Q |
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| T |
2383139 |
aatatgtgcaggactaaagaagctaagaaatgatgtgaaatcttgtgaatatgaagatattcgtgtgatgtgggagatgctaaacagaaatgaatcatta |
2383238 |
T |
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| Q |
113 |
tcagagtttggtggtggtaattctccaaacaaaatcaagaagattcattacttgaaattattcaaatgggcaaggtgtgctgctccataaaattctcact |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2383239 |
tcagagtttggtggtggtaattctccaaacaaaatcaagaagattcattacttgaaattattcaaatgggcaaggtgtgctgctccataaaattctcact |
2383338 |
T |
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| Q |
213 |
cctaatcatgtgtgtgagtttattt |
237 |
Q |
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||||||||||||||||| ||||||| |
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| T |
2383339 |
cctaatcatgtgtgtgaatttattt |
2383363 |
T |
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