View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18643_low_6 (Length: 474)

Name: NF18643_low_6
Description: NF18643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18643_low_6
NF18643_low_6
[»] chr7 (43 HSPs)
chr7 (14-456)||(26935449-26935899)
chr7 (284-369)||(26935383-26935469)
chr7 (124-253)||(27121603-27121732)
chr7 (201-280)||(8445183-8445262)
chr7 (176-280)||(7100687-7100790)
chr7 (121-226)||(38010665-38010777)
chr7 (176-253)||(22759110-22759187)
chr7 (184-280)||(5628643-5628739)
chr7 (167-231)||(43318588-43318652)
chr7 (182-253)||(35536031-35536102)
chr7 (183-253)||(7244626-7244696)
chr7 (177-251)||(33894549-33894622)
chr7 (182-260)||(45593794-45593872)
chr7 (123-180)||(4966160-4966217)
chr7 (123-235)||(23918899-23919018)
chr7 (182-251)||(24973870-24973939)
chr7 (182-231)||(35266845-35266894)
chr7 (187-236)||(43152982-43153031)
chr7 (212-253)||(45078217-45078258)
chr7 (175-280)||(47003984-47004089)
chr7 (175-280)||(49060437-49060542)
chr7 (204-280)||(22388001-22388077)
chr7 (187-231)||(28613614-28613658)
chr7 (182-253)||(30751441-30751512)
chr7 (124-171)||(40428568-40428615)
chr7 (175-277)||(12835005-12835107)
chr7 (101-155)||(20553132-20553186)
chr7 (177-270)||(30133958-30134049)
chr7 (175-253)||(39539829-39539907)
chr7 (189-231)||(45806408-45806450)
chr7 (182-227)||(1417214-1417259)
chr7 (122-187)||(12792506-12792571)
chr7 (122-175)||(27378836-27378889)
chr7 (86-146)||(36598327-36598388)
chr7 (182-231)||(39591542-39591591)
chr7 (187-240)||(40009407-40009460)
chr7 (201-245)||(5276156-5276200)
chr7 (212-280)||(5938981-5939049)
chr7 (118-178)||(6552296-6552356)
chr7 (201-249)||(7513562-7513610)
chr7 (124-156)||(12234899-12234931)
chr7 (183-231)||(28178915-28178963)
chr7 (201-253)||(29574695-29574747)
[»] chr4 (50 HSPs)
chr4 (123-280)||(22684530-22684689)
chr4 (124-226)||(47800581-47800683)
chr4 (182-231)||(42321954-42322003)
chr4 (201-280)||(485978-486057)
chr4 (126-280)||(21157665-21157826)
chr4 (123-253)||(54325046-54325183)
chr4 (187-245)||(17884000-17884058)
chr4 (175-253)||(30024624-30024702)
chr4 (188-253)||(51555948-51556013)
chr4 (185-290)||(1404307-1404414)
chr4 (192-280)||(4471068-4471156)
chr4 (183-253)||(4191663-4191734)
chr4 (192-231)||(31851400-31851439)
chr4 (201-280)||(46796915-46796994)
chr4 (123-253)||(49219063-49219200)
chr4 (123-174)||(51117008-51117059)
chr4 (108-174)||(1137722-1137788)
chr4 (175-252)||(8422907-8422982)
chr4 (182-279)||(5219575-5219672)
chr4 (125-253)||(14011158-14011293)
chr4 (126-175)||(18019981-18020030)
chr4 (187-231)||(43505902-43505946)
chr4 (182-253)||(25409810-25409881)
chr4 (175-242)||(30338660-30338727)
chr4 (212-279)||(41241649-41241716)
chr4 (203-250)||(47970245-47970292)
chr4 (175-230)||(51630058-51630113)
chr4 (167-253)||(55437346-55437430)
chr4 (212-262)||(2980576-2980626)
chr4 (118-180)||(20105435-20105496)
chr4 (121-175)||(21043242-21043296)
chr4 (194-248)||(28623218-28623272)
chr4 (175-253)||(32066478-32066555)
chr4 (110-156)||(35405975-35406021)
chr4 (188-250)||(41088311-41088373)
chr4 (183-260)||(7022585-7022662)
chr4 (182-227)||(10192234-10192279)
chr4 (123-156)||(19429737-19429770)
chr4 (175-220)||(27043898-27043943)
chr4 (201-246)||(50745931-50745976)
chr4 (182-231)||(52170061-52170110)
chr4 (187-228)||(54069497-54069538)
chr4 (121-269)||(55084488-55084637)
chr4 (187-231)||(3155549-3155593)
chr4 (184-268)||(5131309-5131393)
chr4 (201-277)||(24443938-24444014)
chr4 (187-231)||(29388560-29388604)
chr4 (189-245)||(39438618-39438674)
chr4 (187-231)||(39603527-39603571)
chr4 (187-231)||(41336707-41336750)
[»] chr5 (57 HSPs)
chr5 (121-231)||(11615454-11615564)
chr5 (125-253)||(11684347-11684473)
chr5 (201-280)||(26516195-26516274)
chr5 (182-270)||(4991018-4991106)
chr5 (201-277)||(20982229-20982305)
chr5 (117-258)||(3237018-3237160)
chr5 (182-280)||(6733968-6734065)
chr5 (123-279)||(16944992-16945155)
chr5 (175-253)||(36539670-36539748)
chr5 (200-253)||(10391277-10391330)
chr5 (175-279)||(29588778-29588881)
chr5 (187-231)||(35446001-35446045)
chr5 (184-231)||(10363696-10363743)
chr5 (121-180)||(17258890-17258949)
chr5 (121-246)||(4855629-4855761)
chr5 (126-180)||(30653388-30653442)
chr5 (175-253)||(32059657-32059734)
chr5 (182-280)||(35963145-35963243)
chr5 (182-270)||(9202823-9202912)
chr5 (121-170)||(12521542-12521591)
chr5 (201-250)||(16863708-16863757)
chr5 (188-253)||(35095864-35095929)
chr5 (126-231)||(43215325-43215429)
chr5 (186-246)||(11835208-11835268)
chr5 (175-279)||(32172551-32172655)
chr5 (177-253)||(33961627-33961703)
chr5 (115-175)||(37588361-37588421)
chr5 (175-235)||(42181160-42181220)
chr5 (187-231)||(42500305-42500349)
chr5 (129-180)||(8985665-8985716)
chr5 (201-280)||(34690771-34690850)
chr5 (121-180)||(36638751-36638810)
chr5 (121-156)||(37611222-37611257)
chr5 (121-156)||(37787952-37787987)
chr5 (201-280)||(39257480-39257559)
chr5 (161-231)||(465900-465970)
chr5 (222-280)||(2569817-2569875)
chr5 (182-220)||(12595815-12595853)
chr5 (175-229)||(14295454-14295508)
chr5 (187-253)||(40097483-40097549)
chr5 (188-233)||(2817901-2817946)
chr5 (184-289)||(6738484-6738589)
chr5 (121-154)||(9106851-9106884)
chr5 (175-260)||(19177396-19177481)
chr5 (187-227)||(1295842-1295882)
chr5 (175-227)||(7853608-7853660)
chr5 (226-274)||(11153532-11153580)
chr5 (175-219)||(11667121-11667165)
chr5 (187-227)||(14932240-14932280)
chr5 (124-180)||(16889739-16889795)
chr5 (201-253)||(19113211-19113263)
chr5 (203-267)||(24084808-24084872)
chr5 (175-270)||(36796774-36796870)
chr5 (124-156)||(37526209-37526241)
chr5 (124-156)||(37690646-37690678)
chr5 (205-253)||(40499773-40499821)
chr5 (187-231)||(42646861-42646905)
[»] chr8 (41 HSPs)
chr8 (122-253)||(11494077-11494208)
chr8 (124-280)||(4558695-4558858)
chr8 (175-244)||(1112786-1112855)
chr8 (187-280)||(14482099-14482192)
chr8 (182-253)||(7026655-7026726)
chr8 (121-171)||(2458573-2458623)
chr8 (175-280)||(12972753-12972858)
chr8 (175-224)||(42237490-42237539)
chr8 (130-252)||(10722556-10722678)
chr8 (175-278)||(31884493-31884596)
chr8 (183-278)||(40280281-40280376)
chr8 (184-247)||(42597331-42597394)
chr8 (121-247)||(11493902-11494028)
chr8 (123-209)||(30277254-30277339)
chr8 (124-180)||(39268513-39268570)
chr8 (192-276)||(2364558-2364642)
chr8 (175-231)||(8908996-8909052)
chr8 (123-175)||(14949875-14949927)
chr8 (175-231)||(16210954-16211010)
chr8 (216-267)||(6918941-6918992)
chr8 (201-280)||(39392755-39392834)
chr8 (202-280)||(1117243-1117321)
chr8 (187-253)||(20672696-20672762)
chr8 (175-253)||(34788495-34788573)
chr8 (123-157)||(39866743-39866777)
chr8 (182-280)||(41336720-41336818)
chr8 (175-268)||(3645884-3645977)
chr8 (192-280)||(7008526-7008612)
chr8 (215-280)||(8062137-8062202)
chr8 (177-246)||(37444485-37444554)
chr8 (121-178)||(42215313-42215370)
chr8 (175-239)||(3537099-3537163)
chr8 (124-160)||(6950346-6950382)
chr8 (175-275)||(7878554-7878653)
chr8 (212-280)||(8536153-8536221)
chr8 (187-270)||(10114396-10114479)
chr8 (124-156)||(11183573-11183605)
chr8 (123-175)||(31862502-31862554)
chr8 (201-253)||(35298572-35298624)
chr8 (175-227)||(35374441-35374493)
chr8 (201-277)||(35869737-35869813)
[»] chr2 (50 HSPs)
chr2 (176-280)||(35459807-35459911)
chr2 (175-253)||(18962106-18962184)
chr2 (147-253)||(33267556-33267662)
chr2 (123-175)||(32821818-32821870)
chr2 (167-253)||(14209201-14209287)
chr2 (121-226)||(22681192-22681304)
chr2 (129-210)||(25661082-25661162)
chr2 (182-250)||(3673734-3673802)
chr2 (201-253)||(10190203-10190255)
chr2 (175-290)||(11393433-11393549)
chr2 (175-290)||(11410094-11410210)
chr2 (175-247)||(28902007-28902079)
chr2 (127-231)||(40837448-40837552)
chr2 (126-175)||(3059286-3059335)
chr2 (201-290)||(3102580-3102669)
chr2 (176-253)||(17952770-17952847)
chr2 (122-230)||(31739980-31740082)
chr2 (122-170)||(1647250-1647298)
chr2 (123-231)||(1939341-1939456)
chr2 (186-246)||(7825183-7825243)
chr2 (187-231)||(15305603-15305647)
chr2 (187-231)||(42420374-42420418)
chr2 (177-280)||(43808473-43808576)
chr2 (187-246)||(4026748-4026807)
chr2 (185-280)||(29316853-29316948)
chr2 (185-260)||(29729842-29729917)
chr2 (187-246)||(36114350-36114409)
chr2 (122-180)||(7871647-7871705)
chr2 (121-175)||(10198487-10198541)
chr2 (176-294)||(28803575-28803693)
chr2 (188-278)||(33197320-33197410)
chr2 (130-180)||(41817172-41817222)
chr2 (183-253)||(44606164-44606234)
chr2 (121-248)||(3235391-3235523)
chr2 (194-231)||(5998789-5998826)
chr2 (183-248)||(11344360-11344425)
chr2 (175-278)||(11513800-11513900)
chr2 (101-154)||(16551827-16551880)
chr2 (124-156)||(1160750-1160782)
chr2 (201-245)||(5045251-5045295)
chr2 (125-157)||(11063220-11063252)
chr2 (124-180)||(13736303-13736359)
chr2 (215-279)||(29318770-29318834)
chr2 (192-252)||(31461363-31461423)
chr2 (187-231)||(31561833-31561877)
chr2 (123-175)||(43141880-43141932)
chr2 (187-231)||(43279607-43279651)
chr2 (212-280)||(43456790-43456858)
chr2 (202-246)||(44443251-44443295)
chr2 (187-231)||(45229458-45229502)
[»] chr1 (52 HSPs)
chr1 (123-245)||(27140417-27140539)
chr1 (172-290)||(29793988-29794105)
chr1 (121-270)||(10744214-10744364)
chr1 (188-281)||(44236612-44236705)
chr1 (175-260)||(45990126-45990211)
chr1 (177-253)||(870969-871045)
chr1 (183-267)||(7274015-7274099)
chr1 (140-280)||(23895233-23895373)
chr1 (121-246)||(37593691-37593808)
chr1 (175-231)||(37841944-37842000)
chr1 (175-278)||(4200128-4200231)
chr1 (187-246)||(34619458-34619517)
chr1 (124-280)||(43029412-43029573)
chr1 (175-290)||(49557028-49557143)
chr1 (118-180)||(5047150-5047212)
chr1 (175-253)||(44032067-44032145)
chr1 (183-253)||(48748659-48748728)
chr1 (175-280)||(49516966-49517072)
chr1 (122-180)||(51929783-51929841)
chr1 (115-152)||(37416837-37416874)
chr1 (183-251)||(6933037-6933105)
chr1 (130-217)||(2522596-2522683)
chr1 (123-178)||(6279405-6279460)
chr1 (121-180)||(6292497-6292556)
chr1 (205-280)||(13037761-13037836)
chr1 (121-175)||(7262525-7262579)
chr1 (176-230)||(15687142-15687196)
chr1 (190-228)||(36070199-36070237)
chr1 (183-253)||(38651485-38651555)
chr1 (182-280)||(40304129-40304227)
chr1 (187-249)||(46499934-46499996)
chr1 (182-231)||(5941522-5941571)
chr1 (186-231)||(8852806-8852851)
chr1 (123-156)||(26184776-26184809)
chr1 (132-177)||(28083308-28083353)
chr1 (184-253)||(40357963-40358032)
chr1 (110-175)||(43722154-43722219)
chr1 (184-249)||(45170401-45170466)
chr1 (121-157)||(219558-219594)
chr1 (123-175)||(3215730-3215782)
chr1 (175-231)||(6074420-6074476)
chr1 (175-227)||(10586440-10586492)
chr1 (183-231)||(14737781-14737829)
chr1 (182-250)||(17269177-17269245)
chr1 (195-231)||(17830100-17830136)
chr1 (187-227)||(41184730-41184770)
chr1 (187-231)||(45145172-45145216)
chr1 (192-228)||(46252767-46252803)
chr1 (187-231)||(47432042-47432086)
chr1 (121-157)||(48748322-48748358)
chr1 (224-276)||(49365905-49365957)
chr1 (183-231)||(50319238-50319286)
[»] chr6 (44 HSPs)
chr6 (182-277)||(3217265-3217360)
chr6 (182-280)||(8349739-8349837)
chr6 (175-262)||(22742281-22742368)
chr6 (175-253)||(29274297-29274375)
chr6 (173-253)||(7351674-7351754)
chr6 (175-246)||(4006645-4006716)
chr6 (177-252)||(7713950-7714025)
chr6 (123-278)||(32386115-32386270)
chr6 (186-240)||(31624195-31624249)
chr6 (203-269)||(31668781-31668847)
chr6 (123-244)||(2034455-2034575)
chr6 (175-280)||(2206487-2206592)
chr6 (205-270)||(33259723-33259788)
chr6 (124-231)||(281858-281972)
chr6 (175-275)||(2514604-2514704)
chr6 (201-253)||(3169339-3169391)
chr6 (175-231)||(9093624-9093680)
chr6 (187-231)||(30536424-30536468)
chr6 (194-262)||(33911368-33911436)
chr6 (168-270)||(264277-264380)
chr6 (179-253)||(1497904-1497979)
chr6 (202-253)||(4325403-4325454)
chr6 (121-156)||(4420671-4420706)
chr6 (212-279)||(28130030-28130097)
chr6 (182-253)||(32386638-32386709)
chr6 (216-255)||(32578059-32578098)
chr6 (121-163)||(6536968-6537010)
chr6 (124-174)||(20512654-20512704)
chr6 (187-253)||(29269820-29269886)
chr6 (121-252)||(30523586-30523722)
chr6 (202-244)||(33416318-33416360)
chr6 (121-175)||(34403864-34403918)
chr6 (182-231)||(2027481-2027530)
chr6 (137-253)||(13360659-13360782)
chr6 (122-175)||(25103287-25103340)
chr6 (187-224)||(28621190-28621227)
chr6 (201-290)||(4331167-4331258)
chr6 (187-231)||(8147648-8147692)
chr6 (182-270)||(10749303-10749390)
chr6 (187-231)||(18076142-18076186)
chr6 (182-226)||(28660835-28660879)
chr6 (187-231)||(30536638-30536682)
chr6 (204-280)||(31461575-31461651)
chr6 (188-280)||(32975875-32975967)
[»] chr3 (55 HSPs)
chr3 (201-280)||(36200015-36200094)
chr3 (153-231)||(42809247-42809325)
chr3 (201-253)||(25964366-25964418)
chr3 (182-253)||(22232750-22232821)
chr3 (177-260)||(27792789-27792872)
chr3 (121-231)||(2128265-2128375)
chr3 (183-253)||(16790432-16790502)
chr3 (183-253)||(44374720-44374790)
chr3 (182-231)||(15304422-15304471)
chr3 (175-231)||(37689452-37689508)
chr3 (123-290)||(38462168-38462342)
chr3 (167-231)||(42808925-42808989)
chr3 (174-253)||(41028918-41028997)
chr3 (183-266)||(44284134-44284217)
chr3 (121-231)||(20669125-20669235)
chr3 (182-231)||(10101551-10101600)
chr3 (182-231)||(10212476-10212525)
chr3 (204-289)||(20504100-20504185)
chr3 (123-252)||(25459642-25459768)
chr3 (221-278)||(28842971-28843028)
chr3 (118-175)||(30322024-30322081)
chr3 (123-232)||(34414793-34414902)
chr3 (195-240)||(49465751-49465796)
chr3 (182-231)||(52618949-52618998)
chr3 (175-278)||(21862243-21862347)
chr3 (187-270)||(35127451-35127535)
chr3 (187-231)||(44061103-44061147)
chr3 (175-227)||(45433007-45433059)
chr3 (201-245)||(49546581-49546625)
chr3 (175-231)||(49586984-49587040)
chr3 (177-252)||(905040-905115)
chr3 (201-268)||(16790182-16790249)
chr3 (203-280)||(22723959-22724038)
chr3 (201-280)||(49739464-49739543)
chr3 (124-174)||(13371127-13371177)
chr3 (175-252)||(25183056-25183134)
chr3 (177-254)||(26330386-26330461)
chr3 (175-253)||(28779280-28779358)
chr3 (175-253)||(32703062-32703140)
chr3 (130-184)||(34924554-34924608)
chr3 (187-253)||(39971243-39971309)
chr3 (203-253)||(43116524-43116574)
chr3 (118-156)||(48933604-48933642)
chr3 (134-171)||(23315639-23315676)
chr3 (186-231)||(30669049-30669094)
chr3 (162-231)||(34363951-34364020)
chr3 (187-252)||(36189491-36189556)
chr3 (123-175)||(237406-237458)
chr3 (183-279)||(3757946-3758042)
chr3 (187-231)||(20880423-20880466)
chr3 (187-231)||(30956706-30956750)
chr3 (187-231)||(30972518-30972562)
chr3 (182-230)||(36783409-36783457)
chr3 (121-185)||(41644452-41644516)
chr3 (124-180)||(52412914-52412970)
[»] scaffold0024 (3 HSPs)
scaffold0024 (182-280)||(27473-27571)
scaffold0024 (162-231)||(21333-21402)
scaffold0024 (167-235)||(58879-58947)
[»] scaffold0428 (1 HSPs)
scaffold0428 (205-249)||(3832-3876)
[»] scaffold0060 (1 HSPs)
scaffold0060 (201-253)||(63379-63431)
[»] scaffold0590 (1 HSPs)
scaffold0590 (201-252)||(1168-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (201-252)||(2756-2807)
[»] scaffold0103 (1 HSPs)
scaffold0103 (182-231)||(51514-51563)
[»] scaffold0455 (1 HSPs)
scaffold0455 (212-279)||(8617-8684)
[»] scaffold0020 (1 HSPs)
scaffold0020 (124-175)||(159983-160034)
[»] scaffold0654 (1 HSPs)
scaffold0654 (183-253)||(6713-6783)
[»] scaffold0089 (1 HSPs)
scaffold0089 (124-174)||(33637-33687)
[»] scaffold0014 (1 HSPs)
scaffold0014 (183-253)||(116632-116702)
[»] scaffold0153 (2 HSPs)
scaffold0153 (124-156)||(6504-6536)
scaffold0153 (124-156)||(13524-13556)
[»] scaffold0003 (1 HSPs)
scaffold0003 (123-175)||(306335-306387)


Alignment Details
Target: chr7 (Bit Score: 406; Significance: 0; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 14 - 456
Target Start/End: Original strand, 26935449 - 26935899
Alignment:
Q  14 tgaagcagagattgcaaataccatggatatgcaatcttgtattatgcatagattatagata--------tagtcataagctgtttgagtgagctttggaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||||||||||    
T  26935449 tgaagcagagattgcaaataccatggatatgcaatcttgtattatgcatcgattatagatatattgatatagtcataagctgtttgagtgagctttggaa 26935548  T
Q  106 agatcttacgaaatattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttatt 205  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26935549 agatcttatgaaatattcataagctgttttcagcttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttatt 26935648  T
Q  206 ttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaaccggtttatcataatcaattaagtg 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26935649 ttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaaccggtttatcataatcaattaagtg 26935748  T
Q  306 cattgcatagagactaatacatgagttgttgcattgactcatttgaagcagagattgcaaatactgaacacaggaaatcttgtgcttgtggatgaattca 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26935749 cattgcatagagactaatacatgagttgttacattgactcatttgaagcagagattgcaaatactgaacacaggaaatcttgtgcttgtggatgaattca 26935848  T
Q  406 acaatatcaaatggcaaagtttcaattttccaactgatgtaatgctatggg 456  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26935849 acaatatcaaatggcaaagtttcaattttccaactgatgtaatgctatggg 26935899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 26935383 - 26935469
Alignment:
Q  284 gtttatcataatcaattaag-tgcattgcatagagactaatacatgagttgttgcattgactcatttgaagcagagattgcaaatac 369  Q
    ||||||||||  ||||| || ||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||    
T  26935383 gtttatcatagacaattgagctgcattgcatagagactaacacatgaattgctgcattgacttatttgaagcagagattgcaaatac 26935469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 253
Target Start/End: Original strand, 27121603 - 27121732
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaa 223  Q
    ||||||||||||||  || ||||||||||||||  || |||| ||||  | | |||| ||||||||||||||| || |||||||||||||| ||||| ||    
T  27121603 ataagctgttttcaacttgtttccataagctctcaagtatagcttatttacacagcttatatgaaaacaatttgactttattttatcatttattatagaa 27121702  T
Q  224 atagcttacacaaaagcacttatatgataa 253  Q
    ||| |||| ||| ||| | |||||||||||    
T  27121703 atatcttatacataaggaattatatgataa 27121732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 8445262 - 8445183
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| |||||||||||||||||||| | | ||||||||||||||||| | || ||| |||| || |||||||||    
T  8445262 ttattttatcttttgttataaaaatagcttataaacaagcacttatatgataaacactaatgctatacgcacttaattaa 8445183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 7100687 - 7100790
Alignment:
Q  176 tagctcatatgaaaacaa-tttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    ||||| |||||||||||| ||| || || ||||||| |||||||||||||||||||||||  ||| ||||||||||||| | |||||  |||||||  ||    
T  7100687 tagcttatatgaaaacaaatttgacttttttttatcttttgttataaaaatagcttacac--aagtacttatatgataaacgcttatactataagcattt 7100784  T
Q  275 aattaa 280  Q
    ||||||    
T  7100785 aattaa 7100790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 38010777 - 38010665
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaa-------atagctcatatgaaaacaatttaaccttattttatcatt 213  Q
    ||||||||||||||| || ||||||||||||| ||| ||| |||||||||||||       |||||| |||||||||||||||  | || ||||||| ||    
T  38010777 ttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttt 38010678  T
Q  214 tgttataaaaata 226  Q
    |||| ||||||||    
T  38010677 tgttttaaaaata 38010665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 22759187 - 22759110
Alignment:
Q  176 tagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||| |||||||||||||||  | |||||||||| ||||||||| |||||||||| ||| || | ||||||||||||    
T  22759187 tagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacataaacgcttatatgataa 22759110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 5628643 - 5628739
Alignment:
Q  184 atgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||| || |||  ||||||||||||||||||||||||||||||  || |||| ||| |||||||| | ||| || |||| | ||||||||||    
T  5628643 atgaaaacagttcaactctattttatcatttgttataaaaatagcttatgcataagcccttgtatgataagcccttctgttatatgtgcttaattaa 5628739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 43318588 - 43318652
Alignment:
Q  167 ttatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||  |||| |||||| |||||||| || |||||||||||||||||||| ||||||||||    
T  43318588 ttatgaaatcagcttatatgataacaatttgactttattttatcatttgttatagaaatagctta 43318652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 35536102 - 35536031
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||||||| || |||||||||| | ||||||| |||||||||| ||| ||||  |||||||||||    
T  35536102 atatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataa 35536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 7244696 - 7244626
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||| ||| || || ||||||| |||| |||| |||||||||| ||| |||||||||||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 33894622 - 33894549
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgat 251  Q
    |||| ||||||||||| ||| || |||||||||| ||||||||| |||||||||| ||| ||||||||| |||||    
T  33894622 agcttatatgaaaacagtttgac-ttattttatcttttgttatagaaatagcttatacataagcacttacatgat 33894549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 45593794 - 45593872
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctctta 260  Q
    ||||||||||| ||| || |||||||||  ||||||| | |||||||||| ||| ||||| ||||||||||| ||||||    
T  45593794 atatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataaactctta 45593872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 4966217 - 4966160
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    |||||| |||||||||||||||||||||||||||| || || | ||||||||| ||||    
T  4966217 cataagttgttttcagtttatttccataagctcttcaggatggcttatgaaaacagct 4966160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 23919018 - 23918899
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattat-------gaaaatagctcatatgaaaacaatttaaccttattttatcatttg 215  Q
    ||||||||||||||||||| |||| |||||| ||| ||||||| ||||       ||  |||||| ||||||||||||||| || |||||||||| ||||    
T  23919018 cataagctgttttcagtttttttcaataagcccttcagaatagtttatgattacagattatagcttatatgaaaacaatttgactttattttatcttttg 23918919  T
Q  216 ttataaaaatagcttacaca 235  Q
    | ||| | ||| ||||||||    
T  23918918 taatagagataacttacaca 23918899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 24973939 - 24973870
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgat 251  Q
    ||||| ||||||||| |  |||||||||| ||||||||| |||||||||  ||| |||||||||||||||    
T  24973939 atatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 35266894 - 35266845
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||| |||||||| |||||| ||||||||||||| ||||||||||    
T  35266894 atatgaaaaaaatttaactttatttaatcatttgttatagaaatagctta 35266845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 43152982 - 43153031
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaa 236  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagcttatacaa 43153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 45078258 - 45078217
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  45078258 tttgttataaaaatagcttatacataagcacttatatgataa 45078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 47004089 - 47003984
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||| |||||| |||| | ||| || ||||||||||  |||||||| |||||||||||| | || |||||||||||||| |  || || ||||||| |||    
T  47004089 atagttcatataaaaatagtttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataaacatttttgctataagcactt 47003990  T
Q  275 aattaa 280  Q
    ||||||    
T  47003989 aattaa 47003984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 49060542 - 49060437
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| |||| |||| ||||| || |||||||||  ||||||||| |||||||||| ||| ||  ||||||||||||| |  ||||  |||||| ||||    
T  49060542 atagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataagccattatactataagtgctt 49060443  T
Q  275 aattaa 280  Q
    ||||||    
T  49060442 aattaa 49060437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 22388001 - 22388077
Alignment:
Q  204 ttttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||| ||||||||| ||||||||||  || ||||||||| |||||||    ||||| |||||||||||||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataagcgcttaattaa 22388077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 28613614 - 28613658
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||    
T  28613614 aaaacaatttaactttgttttatcttttgttataaaaatagctta 28613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 30751512 - 30751441
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||| ||||| || |||||||||  ||||||| |||||||| |||  || |||||||||||||||||    
T  30751512 atatgaaaataatttgactttattttatattttgttacaaaaatagtttattcacaagcacttatatgataa 30751441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 40428615 - 40428568
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatg 171  Q
    |||| |||||||||| ||||||||||||||||||||| |||| |||||    
T  40428615 ataaactgttttcagcttatttccataagctctttaggatagcttatg 40428568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 12835005 - 12835107
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| ||||||||||||||| || |||||||||| |||||| || ||||||| |   || ||||||| ||| | ||| |  ||||| |||||||||||    
T  12835005 atagctaatatgaaaacaatttgactttattttatcttttgttgtagaaatagcatctgcataagcactcatacgctaagcgtttatgttataagcgctt 12835104  T
Q  275 aat 277  Q
    |||    
T  12835105 aat 12835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 20553186 - 20553132
Alignment:
Q  101 tggaaagatcttacgaaatattcataagctgttttcagtttatttccataagctc 155  Q
    |||||| | ||||||| || |||||||| ||||||||| ||||||||||||||||    
T  20553186 tggaaacagcttacgacatgttcataagttgttttcagattatttccataagctc 20553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 30134049 - 30133958
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagc 270  Q
    |||| ||| |||||||| || || |||||||||| |||||| ||||||||||||| ||| || ||||  |||||||| | |||||| |||||||    
T  30134049 agcttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacact--tatgataagcgcttatgctataagc 30133958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 39539829 - 39539907
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||||||||| |  |||||||  | ||| ||||  |||||||||| ||||||||| |||||||||||    
T  39539829 atagcttatatgaaaacaatttgaatttattttcacttttattatcgaaatagcttatacaaaagcagttatatgataa 39539907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 45806408 - 45806450
Alignment:
Q  189 aacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||| |||||||||| |||| |||||||||||||||    
T  45806408 aacaatttaacgttattttatcttttgctataaaaatagctta 45806450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 1417259 - 1417214
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    ||||||||||||||| || |||||||||| ||||||||| ||||||    
T  1417259 atatgaaaacaatttgactttattttatcttttgttatataaatag 1417214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 12792506 - 12792571
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatga 187  Q
    |||||| ||||| |||| ||||||| |||||||||| |  |||| |||||||||||||| ||||||    
T  12792506 tcataaactgttatcagcttatttcaataagctcttcaagatagcttatgaaaatagcttatatga 12792571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 27378836 - 27378889
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    ||||||| |||||||||||||||| ||||||||||  || |||| |||||||||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaa 27378889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 36598327 - 36598388
Alignment:
Q  86 tgtttgagtgagctt-tggaaagatcttacgaaatattcataagctgttttcagtttatttc 146  Q
    |||||||| |||||| |||||| |||||| || || |||||||||||||||||| |||||||    
T  36598327 tgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttatttc 36598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 39591542 - 39591591
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||||| || |||||||||| ||||||||| ||||| ||||    
T  39591542 atatgaaaacaatttgactttattttatcttttgttatagaaataactta 39591591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 40009460 - 40009407
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagc 240  Q
    ||||||||||||| ||||||| || ||||||||||||| |||||| ||| ||||    
T  40009460 aaaacaatttaactttattttgtcttttgttataaaaacagcttatacataagc 40009407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 5276200 - 5276156
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcactta 245  Q
    |||| ||||| |||||||||||||||||||| ||| |||||||||    
T  5276200 ttatgttatcttttgttataaaaatagcttatacataagcactta 5276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 5939049 - 5938981
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||||||||| |||| ||| || ||||||| | |||||| ||| ||  ||||||||||||||||    
T  5939049 tttgttataaaaataacttatacataaacacttatgtaataatcgcttctgcaataagcgcttaattaa 5938981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 6552296 - 6552356
Alignment:
Q  118 atattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatag 178  Q
    ||||||||||||||||||||| |||||| ||||| ||||  |  |||| ||||||||||||    
T  6552296 atattcataagctgttttcagcttattttcataaactctgcatgatagtttatgaaaatag 6552356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 7513610 - 7513562
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatg 249  Q
    |||||||||| |||||  ||||||||||||| ||| |||||||||||||    
T  7513610 ttattttatcttttgtcttaaaaatagcttatacataagcacttatatg 7513562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 12234899 - 12234931
Alignment:
Q  124 ataagctgttttcagtttatttccataagctct 156  Q
    ||||||||||||||| |||||||||||||||||    
T  12234899 ataagctgttttcagcttatttccataagctct 12234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 28178963 - 28178915
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||| | || |||||||||| ||||||||| ||||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagctta 28178915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 29574695 - 29574747
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||| ||||| |||||||||||||| ||| ||||| |||||||||||    
T  29574695 ttatttcatcttttgtcataaaaatagcttatacataagcatttatatgataa 29574747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 280
Target Start/End: Original strand, 22684530 - 22684689
Alignment:
Q  123 cataagctgttttcagtttatttccataagctcttta-ga-atagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||||||| |||||||  ||||||||| | || |||| |||||| || |||| ||||||||||||||| || |||||||| | |||||||||    
T  22684530 cataagctgttttcagcttatttctttaagctcttcaagatatagcttatgagaacagcttatatgaaaacaatttgactttattttaccgtttgttata 22684629  T
Q  221 aaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
     |||||||||| ||| ||||| ||||||||||| | | ||||||||||||  ||||||||    
T  22684630 gaaatagcttatacagaagcatttatatgataagcgcatatggtataagcaattaattaa 22684689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 47800683 - 47800581
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaa 223  Q
    |||||| |||||||| |||||| ||||||||||| |  |||| ||||||||| |||| |||  |||||| |||||| |||||||||| ||||||||| ||    
T  47800683 ataagcggttttcagcttattttcataagctcttcaagatagcttatgaaaacagcttatacaaaaacattttaactttattttatcttttgttatagaa 47800584  T
Q  224 ata 226  Q
    |||    
T  47800583 ata 47800581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 42321954 - 42322003
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  42321954 atatgaaaacaatttgactttattttatcatttgttataaaaatagctta 42322003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 486057 - 485978
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| |||||| || ||||||| || ||| |||||||| |||||||| | |||||| |||||||||||||||||    
T  486057 ttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataagcgcttaattaa 485978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 280
Target Start/End: Complemental strand, 21157826 - 21157665
Alignment:
Q  126 aagctgttttcagtttatttccataagctctttagaatagattatgaaaa-------tagctcatatgaaaacaatttaaccttattttatcatttgtta 218  Q
    |||||||||| || |||||||||||||||||| || ||||  ||||||||       ||||| | ||||||||| ||| || ||| |||||  |||||||    
T  21157826 aagctgtttttagcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttgactttagtttatactttgtta 21157727  T
Q  219 taaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    | ||||||||| | ||| ||||||||||||||||| | ||| || || ||| ||||||||||    
T  21157726 tcaaaatagctgatacataagcacttatatgataaacacttctgatacaagtgcttaattaa 21157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 54325046 - 54325183
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcata-------tgaaaacaatttaaccttattttatcatttg 215  Q
    ||||||||||||||||||||| ||||||| ||||  |  |||| || ||||||||||| |||       |||||||| ||| || |||||||||| ||||    
T  54325046 cataagctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatcttttg 54325145  T
Q  216 ttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    | ||| |||||| ||| ||| |||||||||||||||||    
T  54325146 taatagaaatagtttatacacaagcacttatatgataa 54325183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 17884058 - 17884000
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcactta 245  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||  ||||||||    
T  17884058 aaaacaatttaactttattttatcttttgttatagaaatagcttacacatgagcactta 17884000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 30024702 - 30024624
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||||||||| || |||||||||| ||||||||| ||||| ||||  || ||| |||||||||||||    
T  30024702 atagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataa 30024624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 51555948 - 51556013
Alignment:
Q  188 aaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||| | || |||||||||| |||||||||| ||||||||| ||| |||||||||||||||||    
T  51555948 aaacaatctgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 290
Target Start/End: Complemental strand, 1404414 - 1404307
Alignment:
Q  185 tgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcact--tatatgataatctcttatggtataagcgcttaattaacc 282  Q
    |||||||||||| ||||||||||||| ||| ||||| |||||||||| | ||||||| |  |||||||| | | ||||| ||||| || ||||||||| |    
T  1404414 tgaaaacaatttgaccttattttatcttttattatagaaatagcttataaaaaagcatttatatatgattagcacttatagtatacgcacttaattaagc 1404315  T
Q  283 ggtttatc 290  Q
     |||||||    
T  1404314 tgtttatc 1404307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 4471156 - 4471068
Alignment:
Q  192 aatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||| | |||||||||| |||||||||||||||| |||  || |||||||||||| |||||  |||||| |||||||  ||||||||    
T  4471156 aatttacctttattttatcttttgttataaaaatagtttatgcataagcacttatataataattgcttatgctataagcagttaattaa 4471068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 4191734 - 4191663
Alignment:
Q  183 tatgaaaacaatttaaccttatttt-atcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||| ||| || ||||||| ||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgataa 4191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 231
Target Start/End: Complemental strand, 31851439 - 31851400
Alignment:
Q  192 aatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31851439 aatttaactttattttatcatttgttataaaaatagctta 31851400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 46796994 - 46796915
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| |||||||| |||||||||||  || ||| ||||||||||||| | |||||| |||||| | ||||||||    
T  46796994 ttattttatcgtttgttatgaaaatagcttatgcataagaacttatatgataagcacttatgttataagtgattaattaa 46796915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 253
Target Start/End: Complemental strand, 49219200 - 49219063
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaa-------atagctcatatgaaaacaatttaaccttattttatcatttg 215  Q
    |||||| ||||||||| |||||||||||| |||||||  |||| ||||||||       |||||| ||||||||| ||||| || |||||||||  ||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttg 49219101  T
Q  216 ttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||| ||||| |||| ||  || |||| |||||||||    
T  49219100 ttatagaaataacttatacctaaccactcatatgataa 49219063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 51117008 - 51117059
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaa 174  Q
    ||||||||||||||| ||||||||||||||||||  |||||| |||||||||    
T  51117008 cataagctgttttcaatttatttccataagctctacagaataaattatgaaa 51117059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 1137788 - 1137722
Alignment:
Q  108 atcttacgaaatattcataagctgttttcagtttatttccataagctctttagaatagattatgaaa 174  Q
    |||||| || || |||||||| ||||||||||||||||||||||||||| | | |||| ||||||||    
T  1137788 atcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaa 1137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 8422907 - 8422982
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgata 252  Q
    |||||| |||||||||||||   || |||||||||| ||| |||||||||||||||| ||| |||||| |||||||||    
T  8422907 atagcttatatgaaaacaatg--actttattttatctttttttataaaaatagcttatacataagcacatatatgata 8422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 5219575 - 5219672
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatta 279  Q
    ||||||||| | |||||| |||||||||| ||| ||||| | ||||| || |||  ||||||||||||||||||  ||||| ||||||  ||||||||    
T  5219575 atatgaaaatagtttaactttattttatcttttattatagagatagcatatacatgagcacttatatgataatcaattatgttataagttcttaatta 5219672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 14011293 - 14011158
Alignment:
Q  125 taagctgttttcagtttatttccataagctctttagaatagattatgaaaa-------tagctcatatgaaaacaatttaaccttattttatcatttgtt 217  Q
    |||||||||||||| |||||||||||||||||  |  |||| ||||| |||       ||||| ||||  || ||||||| | |||||||||| ||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttatgtaaacattttgtagcttatatataaccaatttacctttattttatcttttgtt 14011194  T
Q  218 ataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||| ||| || || |||||||||||    
T  14011193 ataaaactagcttatacacaatcatttatatgataa 14011158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 18020030 - 18019981
Alignment:
Q  126 aagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||||||||||||| |||| ||| |||| |||||||||    
T  18020030 aagctgttttcagtttatttccataaactctctagcatagcttatgaaaa 18019981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 43505946 - 43505902
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||    
T  43505946 aaaacaatttaacgttattttatcttttgctataaaaatagctta 43505902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 25409881 - 25409810
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||||||||||||||| ||||| ||| |||   ||||| |||| ||| ||||| |||||||||||    
T  25409881 atatgaaaacaatttaaccttatcttatctttttttaatgaaataccttagacataagcagttatatgataa 25409810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 30338660 - 30338727
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcac 242  Q
    |||||| ||||||||||| |||||| ||||| |||| ||||||||| |||||| ||| ||| ||||||    
T  30338660 atagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataagcac 30338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 41241649 - 41241716
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatta 279  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||  | |||||| ||||||| ||||||||    
T  41241649 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaatta 41241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 47970292 - 47970245
Alignment:
Q  203 attttatcatttgttataaaaatagcttacacaaaagcacttatatga 250  Q
    |||||||| ||||||||| |||||||||| ||| ||||||||||||||    
T  47970292 attttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 51630113 - 51630058
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctt 230  Q
    |||||| |||| ||||||||||||| |||||||||| |||| |||| |||||||||    
T  51630113 atagcttatatcaaaacaatttaactttattttatcttttgctatataaatagctt 51630058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 55437346 - 55437430
Alignment:
Q  167 ttatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||| ||||||||| ||||| || |||||||||   |||||||| |||||||||| | | || | ||||||||||||    
T  55437346 ttatgaaaatagcttatatgaaaataatttgactttattttat--attgttatagaaatagcttatagataatcgcttatatgataa 55437430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 2980576 - 2980626
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataatctcttatg 262  Q
    ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||    
T  2980576 tttgttatagaaatagcttatacataagcacttatatgataaacacttatg 2980626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 20105435 - 20105496
Alignment:
Q  118 atattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||||||||||| ||||||| |||||| ||||||||||| ||||||| |||| |||| ||||    
T  20105435 atattcataagct-ttttcagcttatttacataagctcttcagaatagtttataaaaacagct 20105496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 21043242 - 21043296
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    ||||||||||||||||||| ||||| |||| |||||| || |||| |||||||||    
T  21043242 ttcataagctgttttcagtgtattttcatatgctcttcaggatagcttatgaaaa 21043296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 28623272 - 28623218
Alignment:
Q  194 tttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatat 248  Q
    |||||| |||||||||| ||||||||| ||||| |||| ||| ||||||||||||    
T  28623272 tttaacattattttatcttttgttatataaataacttatacataagcacttatat 28623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 32066478 - 32066555
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||| ||  |||||  |||||||||| |||||||||||| ||| ||| ||| ||||||||||| |||||    
T  32066478 atagctcatatgaacacggtttaat-ttattttatcttttgttataaaagtagtttatacataagcacttatacgataa 32066555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 35406021 - 35405975
Alignment:
Q  110 cttacgaaatattcataagctgttttcagtttatttccataagctct 156  Q
    |||| ||||| |||||||||||||||||| ||| |||||||||||||    
T  35406021 cttaagaaatgttcataagctgttttcagcttacttccataagctct 35405975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 41088373 - 41088311
Alignment:
Q  188 aaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatga 250  Q
    ||||||||| || |||||||||| |||||| | ||||||| ||| ||| ||||||||||||||    
T  41088373 aaacaattttactttattttatcttttgttgtgaaaatagtttatacataagcacttatatga 41088311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 260
Target Start/End: Complemental strand, 7022662 - 7022585
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctctta 260  Q
    |||||||| ||||| ||  ||||||||| ||| |||||||||||||||| |   |||||||||||||| || ||||||    
T  7022662 tatgaaaataatttgactctattttatcttttcttataaaaatagcttataattaagcacttatatgagaaactctta 7022585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 10192279 - 10192234
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    ||||||||||||||| || ||||| |||| ||||||||||||||||    
T  10192279 atatgaaaacaatttgactttattctatcttttgttataaaaatag 10192234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 19429770 - 19429737
Alignment:
Q  123 cataagctgttttcagtttatttccataagctct 156  Q
    |||||||||||||||| |||||||||||||||||    
T  19429770 cataagctgttttcagcttatttccataagctct 19429737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 27043898 - 27043943
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||| ||| |||||||||||||| |||||||||| |||||||||    
T  27043898 atagcttatacgaaaacaatttaactttattttatcctttgttata 27043943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 50745976 - 50745931
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    |||||||||| |||||||||||||||||||| ||| ||||| ||||    
T  50745976 ttattttatcttttgttataaaaatagcttagacataagcatttat 50745931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 52170061 - 52170110
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||| |||||||||| ||||||||||||  || ||||||||||||||    
T  52170061 atatgaatacaatttaactttattttatcatgagtaataaaaatagctta 52170110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 54069497 - 54069538
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagc 228  Q
    ||||||||||||| |||||||||| |||| ||||||||||||    
T  54069497 aaaacaatttaacattattttatcttttgatataaaaatagc 54069538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 55084488 - 55084637
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    ||||||||||| |||||| |||||| |||||||||| ||  |||| | ||||||| | || | |  ||||||||||||| |  ||||||| | ||| | |    
T  55084488 ttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaacaacttaaacaaaaacaatttaacttgcttttatcttctgtcaaa 55084587  T
Q  221 aaaatagcttacacaaaagcacttat-atgataatctcttatggtataag 269  Q
     ||||||||||  || |||| ||||| ||||||||| |||||| ||||||    
T  55084588 gaaatagcttatgcataagcgcttatcatgataatcacttatgctataag 55084637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 3155593 - 3155549
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||| |||| ||||||||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagctta 3155549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 5131309 - 5131393
Alignment:
Q  184 atgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataa 268  Q
    ||||||||| |||||| |||||||||| ||||||||| ||| | |||| ||| ||| | || |  |||||||||||||| |||||    
T  5131309 atgaaaacattttaactttattttatcttttgttatataaacaacttatacataagaaattttgggataatctcttatgttataa 5131393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 24444014 - 24443938
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaat 277  Q
    |||||||||  |||||| || |||| ||||| ||| ||| |||||||||||||   |||||| ||||||||||||||    
T  24444014 ttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaat 24443938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 29388604 - 29388560
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||| ||||| ||||||||||||| ||||||    
T  29388604 aaaacaatttaacgttatcttatcttttgttataaaaagagctta 29388560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 39438618 - 39438674
Alignment:
Q  189 aacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcactta 245  Q
    |||||||| || |||||||||| | ||||||| ||||||||||||||  ||||||||    
T  39438618 aacaatttgactttattttatcttatgttatagaaatagcttacacatgagcactta 39438674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 39603527 - 39603571
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||    
T  39603527 aaaacaatttaacgttattttatcttttgacataaaaatagctta 39603571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 41336750 - 41336707
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||    
T  41336750 aaaacaatttaactttattttatc-tttgctataaaaatagctta 41336707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 11615564 - 11615454
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||||||||| |||||||||||||||| | || |||  ||||||||| |||| ||| | ||||||||| || |||||||||| |||||||||    
T  11615564 ttcataagctgttttcagcttatttccataagctcataaggatatcttatgaaaacagcttatacgtaaacaatttgactttattttatcttttgttata 11615465  T
Q  221 aaaatagctta 231  Q
    |||||||||||    
T  11615464 aaaatagctta 11615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 11684473 - 11684347
Alignment:
Q  125 taagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaa 224  Q
    |||||||||||||  |||||||| ||||||||  || |||| |||||||||||||| ||||||||||| ||| ||  ||||||||  |||||||||||||    
T  11684473 taagctgttttcaacttatttccgtaagctctccagcatagcttatgaaaatagcttatatgaaaacagtttcac--tattttatattttgttataaaaa 11684376  T
Q  225 tagcttacacaaaagcacttatatgataa 253  Q
    ||||||| |||  ||||||||||||||||    
T  11684375 tagcttatacattagcacttatatgataa 11684347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 26516274 - 26516195
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| |||||| || |||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||||||    
T  26516274 ttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaa 26516195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 4991018 - 4991106
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagc 270  Q
    ||||||||| || || | ||||| ||||| |||||||||||||||||||| ||| || |||||||||||||||| |||||| |||||||    
T  4991018 atatgaaaataaattgatcttatgttatcttttgttataaaaatagcttatacacaaacacttatatgataatcgcttatgctataagc 4991106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 20982229 - 20982305
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaat 277  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | |||||| ||||||| ||||||    
T  20982229 ttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaat 20982305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 258
Target Start/End: Complemental strand, 3237160 - 3237018
Alignment:
Q  117 aatattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgt 216  Q
    |||||||||||| ||| |||||  ||||| |||||||||||||| |||| ||||||||| |||| |||||||||   ||| |   |||||| || |||||    
T  3237160 aatattcataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaacagcttatatgaaaatggtttgattctattttgtcttttgt 3237061  T
Q  217 tataaaaatagcttacaca-aaagcacttatatgataatctct 258  Q
     ||| |||||||||| | | ||| |||||||||||||||||||    
T  3237060 aatagaaatagcttatagataaaacacttatatgataatctct 3237018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 6733968 - 6734065
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||||||||| | |||||||||| || ||||||||||||| |||  || || |||||||||||||||| |||||  || ||||||||||||||    
T  6733968 atatgaaaacaattta-ctttattttatctttcgttataaaaatagattatgcataaacacttatatgataatcacttatattagaagcgcttaattaa 6734065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 279
Target Start/End: Original strand, 16944992 - 16945155
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcata-------tgaaaacaatttaaccttattttatcatttg 215  Q
    |||||||||||||||| |||||| | ||||||||| || |||| | |||||||||||| |||       |||||||||||||||  ||||||||| |||     
T  16944992 cataagctgttttcagcttatttacttaagctcttcaggatagttaatgaaaatagcttatagcttctatgaaaacaatttaac--tattttatcttttc 16945089  T
Q  216 ttataaaaatagcttacacaaaagcacttat--atgataatctcttatggtataagcgcttaatta 279  Q
    || || |||||||||| ||| ||||||||||  ||||||| || ||||| ||||| | ||||||||    
T  16945090 ttgtagaaatagcttatacataagcacttatacatgataagcttttatgctataaacacttaatta 16945155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 36539748 - 36539670
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| |||||||||||  || || |||||||||| |||| || | |||||||||||||| |||||||||||||||||    
T  36539748 atagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttatatgataa 36539670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 10391330 - 10391277
Alignment:
Q  200 cttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||| |||||||||||||||||||| ||  |||||||||||||||||    
T  10391330 cttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataa 10391277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 29588881 - 29588778
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| |||||||||||||||  | |||||||||  ||||||||| |||||||||| ||| |||||||||||| | ||    ||||| |||||||||||    
T  29588881 atagcttatatgaaaacaatttt-cattattttatattttgttatagaaatagcttatacataagcacttatataaaaagtgtttatgctataagcgctt 29588783  T
Q  275 aatta 279  Q
    |||||    
T  29588782 aatta 29588778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 35446045 - 35446001
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  35446045 aaaacaatttaactttattttatcatttgctataaaaatagctta 35446001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 10363743 - 10363696
Alignment:
Q  184 atgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  10363743 atgaaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 17258890 - 17258949
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    |||||||||||||||||| |||||| ||||||||||| || |||| ||||||||| ||||    
T  17258890 ttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagct 17258949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 4855761 - 4855629
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa-------tagctcatatgaaaacaatttaaccttattttatcatt 213  Q
    |||| ||||||||||| | |||||||  |||||||||| | |||| |||||||||       || || |||||| ||||||||||| |||||||||  ||    
T  4855761 ttcagaagctgttttcggcttatttctgtaagctctttgggatagtttatgaaaacaacttataacttatatgataacaatttaactttattttattttt 4855662  T
Q  214 tgttataaaaatagcttacacaaaagcacttat 246  Q
    |||||||||||||||| | ||| ||| ||||||    
T  4855661 tgttataaaaatagctaatacataagtacttat 4855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 30653388 - 30653442
Alignment:
Q  126 aagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||||||||||| ||||||||||||||| | ||||| || ||||||||||||||    
T  30653388 aagctgttttcagcttatttccataagctgtctagaaaagcttatgaaaatagct 30653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 32059657 - 32059734
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||||| ||| || |||||||||| || |||| ||||| |||||| ||| |||||||||||||||||    
T  32059657 atagcttatatgaaaacagtttgactttattttatc-ttagttacaaaaacagcttatacataagcacttatatgataa 32059734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 35963243 - 35963145
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||||| |||||  |||||| ||| ||| ||||| |||||  ||| ||| |||||||||| |||||||| |||||| |||||| ||||| ||||    
T  35963243 atatgaaaacagtttaattttatttgatcttttcttatagaaataatttatacacaagcacttatttgataatcgcttatgctataagtgcttagttaa 35963145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 9202823 - 9202912
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat-atgataatctcttatggtataagc 270  Q
    |||||||||||||||||| |||||||||| |||| || | |||||||||| | | |||||||||| ||||||| | ||| || |||||||    
T  9202823 atatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcacttatcatgataaacacttgtgctataagc 9202912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 12521591 - 12521542
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattat 170  Q
    |||||||||||||||||| |||||||||||||||||| | ||||| ||||    
T  12521591 ttcataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 16863757 - 16863708
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatga 250  Q
    |||||| ||| ||||||||||||||||||||| || ||||||||||||||    
T  16863757 ttatttaatcttttgttataaaaatagcttacgcataagcacttatatga 16863708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 35095864 - 35095929
Alignment:
Q  188 aaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||| || |||||||||| ||||||||| |||||| ||| | | |||||||||||||||||    
T  35095864 aaacaatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataa 35095929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 43215429 - 43215325
Alignment:
Q  126 aagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaat 225  Q
    ||||| ||||||  |||||||||||  || ||||| |||| |||||||| || || |||| ||| ||||||||| ||| |||||| ||||||||| ||||    
T  43215429 aagctattttcatcttatttccatacactatttaggatagcttatgaaattaacttatataaaagcaatttaacttta-tttatcttttgttatagaaat 43215331  T
Q  226 agctta 231  Q
    ||||||    
T  43215330 agctta 43215325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 11835268 - 11835208
Alignment:
Q  186 gaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||| ||| || |||||||    
T  11835268 gaaaacaatttaactttattttatcttttgttataaaaatggtttatacataaacacttat 11835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 32172655 - 32172551
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| ||||| |||||| || || | |||||||| |||||| || |||||| ||| ||| |||| ||| |||||||| | |||||| | |||||||||    
T  32172655 atagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataagcgcttatgctgtaagcgctt 32172556  T
Q  275 aatta 279  Q
    |||||    
T  32172555 aatta 32172551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 33961703 - 33961627
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||| ||||||| ||  |  ||||||||| |||||||||||| || |||| |||||| ||||||||||||||    
T  33961703 agctcatataaaaacaaattggctatattttatcctttgttataaaagtaccttatacaaaaacacttatatgataa 33961627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 37588361 - 37588421
Alignment:
Q  115 gaaatattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    ||||| || ||||||||||||||| |||||||||||||||||  ||||||  |||||||||    
T  37588361 gaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 42181160 - 42181220
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacaca 235  Q
    |||||| |||||||||| |||| || || ||||||| |||||||||||||||||| |||||    
T  42181160 atagcttatatgaaaaccatttgactttgttttatcttttgttataaaaatagctgacaca 42181220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 42500305 - 42500349
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||    
T  42500305 aaaacaatttaactttattttatcttttgatataaaaatagctta 42500349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 8985716 - 8985665
Alignment:
Q  129 ctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    |||||||||| || |||||||||||||| ||| |||| ||||||||||||||    
T  8985716 ctgttttcagcttctttccataagctctataggatagcttatgaaaatagct 8985665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 34690850 - 34690771
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| ||||||||| ||||||| || ||| ||| ||||| ||||| | |  |||||||||||||||||| ||||    
T  34690850 ttattttatcttttgttatagaaatagcgtatacataaggacttaaatgattaacatttatggtataagcgcttagttaa 34690771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 36638810 - 36638751
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    |||||||||| ||||||| ||||||||||||||||| ||| |||  ||||||||| ||||    
T  36638810 ttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaacagct 36638751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 37611222 - 37611257
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctct 156  Q
    |||||||||||||||||| |||||||||||||||||    
T  37611222 ttcataagctgttttcaggttatttccataagctct 37611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 37787952 - 37787987
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctct 156  Q
    |||||||||||||||||| |||||||||||||||||    
T  37787952 ttcataagctgttttcaggttatttccataagctct 37787987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 39257480 - 39257559
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||| | ||||||||| | ||||| || ||| ||||||||| ||||||||   ||||| |||||||||||||||||    
T  39257480 ttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataagcgcttaattaa 39257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 465970 - 465900
Alignment:
Q  161 aatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||| ||||| ||| |||| |||  ||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  465970 aatagcttatgtaaacagcttatacaaaaacaatttaactttattttatcttttgtcatagaaatagctta 465900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 2569817 - 2569875
Alignment:
Q  222 aaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| ||| |||||||||||||||||    ||| |||||||||||||||||||    
T  2569817 aaatagcttatacataagcacttatatgataaatgtttacggtataagcgcttaattaa 2569875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 12595815 - 12595853
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  12595815 atatgaaaacaatttaactttattttatcttttgttata 12595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 14295508 - 14295454
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagct 229  Q
    |||||| ||||||||||| ||| || |||||||||| ||||||||| ||||||||    
T  14295508 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagct 14295454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 40097483 - 40097549
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||  ||||||||| | ||||||| ||||| |||| ||| | |||||||||||||||    
T  40097483 aaaacaatttaactctattttatcttctgttatagaaataacttatacatacgcacttatatgataa 40097549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 2817901 - 2817946
Alignment:
Q  188 aaacaatttaaccttattttatcatttgttataaaaatagcttaca 233  Q
    ||||||||| || |||||||||  ||||||||||||||||||||||    
T  2817901 aaacaattttactttattttatactttgttataaaaatagcttaca 2817946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 6738484 - 6738589
Alignment:
Q  184 atgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaaccg 283  Q
    ||||||| ||||| || ||||||| || ||| ||||  |||||||||| ||| ||| |||||||||||||    ||||| ||||| | ||||||||| ||    
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataagtgtttatgctataaactcttaattaaacg 6738583  T
Q  284 gtttat 289  Q
    ||||||    
T  6738584 gtttat 6738589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 9106884 - 9106851
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagct 154  Q
    |||||||||||||||||| |||||||||||||||    
T  9106884 ttcataagctgttttcagcttatttccataagct 9106851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 260
Target Start/End: Complemental strand, 19177481 - 19177396
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctctta 260  Q
    |||||| ||||||||||| ||  || | |||||||| | |||| || |||||| ||| ||| ||||||||||||||||||| ||||    
T  19177481 atagcttatatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataatcactta 19177396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 1295842 - 1295882
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    ||||||||||||| |||||||||||||||||| | ||||||    
T  1295842 aaaacaatttaactttattttatcatttgttacataaatag 1295882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 7853660 - 7853608
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    |||||| ||| | |||||||||||| |||||||||| ||||||||| ||||||    
T  7853660 atagctaatacggaaacaatttaactttattttatcttttgttatagaaatag 7853608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 11153532 - 11153580
Alignment:
Q  226 agcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| ||| |||||||||||||||||  ||||||| |||||||||||    
T  11153532 agcttatacataagcacttatatgataaagtcttatgctataagcgctt 11153580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 11667165 - 11667121
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttat 219  Q
    ||||||||||||||||||| || || |||||||||| ||||||||    
T  11667165 atagctcatatgaaaacaacttgactttattttatcctttgttat 11667121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 14932280 - 14932240
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    ||||||||||||| |||||||||| |||| |||||||||||    
T  14932280 aaaacaatttaactttattttatcttttgctataaaaatag 14932240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 16889795 - 16889739
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||| ||||||||| |||||||||||| |||| ||| |||| ||||||||| ||||    
T  16889795 ataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagct 16889739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 19113211 - 19113263
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||  |||||||||||||||| ||| ||| ||||| |||||||||||    
T  19113211 ttattttattttttgttataaaaatagtttatacataagcaattatatgataa 19113263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 24084872 - 24084808
Alignment:
Q  203 attttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtata 267  Q
    |||||||| ||| | |||||||||||||| |||  |||||||||||||||| || ||||| ||||    
T  24084872 attttatcgtttatcataaaaatagcttatacatgagcacttatatgataagcttttatgatata 24084808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 36796774 - 36796870
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcactta-tatgataatctcttatggtataagc 270  Q
    |||||| || |||||| ||||||||||||||||||  ||||||  | ||||| |||| ||| | ||||||| |||||||||| |||||  |||||||    
T  36796774 atagcttatgtgaaaataatttaaccttattttattttttgttgcagaaataacttatacatatgcacttattatgataatcacttatactataagc 36796870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 37526209 - 37526241
Alignment:
Q  124 ataagctgttttcagtttatttccataagctct 156  Q
    ||||||||||||||| |||||||||||||||||    
T  37526209 ataagctgttttcagcttatttccataagctct 37526241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 37690646 - 37690678
Alignment:
Q  124 ataagctgttttcagtttatttccataagctct 156  Q
    ||||||||||||||| |||||||||||||||||    
T  37690646 ataagctgttttcagcttatttccataagctct 37690678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 40499773 - 40499821
Alignment:
Q  205 tttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||||| ||||| |||  ||| |||||||||||||||||    
T  40499773 tttatcatttgttatagaaataacttgtacataagcacttatatgataa 40499821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 42646905 - 42646861
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| | |||||||| ||||||||||||||| ||||    
T  42646905 aaaacaatttaacttaattttatcctttgttataaaaatatctta 42646861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 11494208 - 11494077
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataa 221  Q
    |||||||||| |||||| |||||| ||||||||||| |  |||| |||||||||||| | ||||||||| | ||| || |||| ||||| |||||||| |    
T  11494208 tcataagctgctttcagcttattttcataagctcttcaagatagcttatgaaaatagtttatatgaaaaaagtttgactttatgttatcttttgttatga 11494109  T
Q  222 aaatagcttacacaaaagcacttatatgataa 253  Q
    ||||| | || |||||||||||||||||||||    
T  11494108 aaataacatatacaaaagcacttatatgataa 11494077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 280
Target Start/End: Complemental strand, 4558858 - 4558695
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaa-------atagctcatatgaaaacaatttaaccttattttatcatttgt 216  Q
    ||||| |||||| |||||||||||||||||||| ||| |||| ||||| ||       |||||  ||||||||| |||||||| |||||||||| ||| |    
T  4558858 ataagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttat 4558759  T
Q  217 tataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||| |||||||||| ||| || |||||| || |||| |  ||||| ||||||||| |||||||    
T  4558758 tatagaaatagcttatacataaacacttacataataaacgtttatgctataagcgcgtaattaa 4558695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 1112855 - 1112786
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcactt 244  Q
    |||||| || |||||||||||||||||||||||||| ||||||||| ||||||| || ||| ||||||||    
T  1112855 atagcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataagcactt 1112786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 14482192 - 14482099
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| || |||||||||| ||||||||| |||||| ||| ||| ||||||||||||||||| | || ||| ||||||  |||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataagaacttaattaa 14482099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 7026726 - 7026655
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||||||| || |||||||||| |||||||||| | |||||||  || |||||||||||||||||    
T  7026726 atatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataa 7026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 2458573 - 2458623
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatg 171  Q
    |||||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  2458573 ttcataagctgttttcagtttatttccataagctctctaggatagcttatg 2458623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 12972858 - 12972753
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| | |||||| || |||||  |||||| ||| | ||||||  |||||||||| ||| |||||||||||||||||   |||||| |||||||||||    
T  12972858 atagcttacatgaaaccagtttaattttatttcatcttctgttattgaaatagcttatacataagcacttatatgataaatgcttatgctataagcgctt 12972759  T
Q  275 aattaa 280  Q
    ||||||    
T  12972758 aattaa 12972753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 42237490 - 42237539
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaa 224  Q
    |||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  42237490 atagcttatatgaaaacaatttaactttattttatcttttgttataaaaa 42237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 10722678 - 10722556
Alignment:
Q  130 tgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaata-gc 228  Q
    |||||| || |||||||||| |||||| ||||| || |||||||||   || ||||||||| ||||| |  |||||||||| ||||||||| ||||| |     
T  10722678 tgtttttagcttatttccatcagctctctagaacagcttatgaaaactacttatatgaaaataattttagtttattttatc-tttgttatataaataaga 10722580  T
Q  229 ttacacaaaagcacttatatgata 252  Q
    ||| ||| ||||||||||||||||    
T  10722579 ttatacacaagcacttatatgata 10722556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 31884596 - 31884493
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| |||||||||||||| ||  | |||||||  ||||||||| ||||| |||| ||| | |||||| |||||||| | |||||| |||||| ||||    
T  31884596 atagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcacttgtatgataagcgcttatgctataagtgctt 31884497  T
Q  275 aatt 278  Q
    ||||    
T  31884496 aatt 31884493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 278
Target Start/End: Original strand, 40280281 - 40280376
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatt 278  Q
    |||||||||||||| || |||||||||| |||||| || ||||| |||| | | | ||||||||||||||| | ||  || |||||||||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatatgataagcgctattgctataagcgcttaatt 40280376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 42597394 - 42597331
Alignment:
Q  184 atgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttata 247  Q
    ||||||||||||| || |||||||||| ||||||||| |||||||||| ||| ||| |||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 11494028 - 11493902
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||| ||||| ||| || ||||||||||| |  ||||  |||||||||||||||||| |||| | ||| || ||| |||||| |||||| |     
T  11494028 ttcataagctgtgttcagcttactttcataagctcttcaagatagcgtatgaaaatagctcatataaaaaaactttgactttactttatcttttgttgtg 11493929  T
Q  221 aaaatagcttacacaaaagcacttata 247  Q
    |||||| ||||   | |||||||||||    
T  11493928 aaaataacttatgaacaagcacttata 11493902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 30277254 - 30277339
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttat 209  Q
    |||||| ||||||||| |||||||||||| |||| ||| |||| ||||||||| |||| |||| |||||||||| || | |||||||    
T  30277254 cataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttatat-aaaacaatttgacttcattttat 30277339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 39268513 - 39268570
Alignment:
Q  124 ataagctgtttt-cagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    |||||||||||| ||||||||||||||||||||| ||||| || ||||||||| ||||    
T  39268513 ataagctgtttttcagtttatttccataagctctctagaaaagcttatgaaaacagct 39268570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 2364558 - 2364642
Alignment:
Q  192 aatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaa 276  Q
    ||||| || |||||||||| |||| |||||||||||| || ||| ||  | ||||||||||| | |||||| |||||||||||||    
T  2364558 aatttgactttattttatcttttgctataaaaatagcgtatacataaatagttatatgataaacacttatgctataagcgcttaa 2364642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8909052 - 8908996
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| ||||||||||||||||||  |||| |||| |||||||||| |||||||||    
T  8909052 atagcttatatgaaaacaatttaactatattatatcttttgttataacaatagctta 8908996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 14949927 - 14949875
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||| ||||||| |||| |||||||| |||| |||||||||    
T  14949927 cataagctgttttcagcttatttctataatctctttaggatagcttatgaaaa 14949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 16210954 - 16211010
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||| ||||||||||    
T  16210954 atagcttatatgaaaacaatgtaactttattttatcatttactatagaaatagctta 16211010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 6918992 - 6918941
Alignment:
Q  216 ttataaaaatagcttacacaaaagcacttatatgataatctcttatggtata 267  Q
    |||||||||||||||| ||| ||||||||||||||||| | |||||| ||||    
T  6918992 ttataaaaatagcttatacataagcacttatatgataaacacttatgctata 6918941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 39392755 - 39392834
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| ||||||||| |||||| ||| ||| |  |||||||||||||| | |||||| |||||  ||||||||||    
T  39392755 ttattttatcttttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataaatgcttaattaa 39392834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 1117321 - 1117243
Alignment:
Q  202 tattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||||| |||||| ||| | |||||||| || |||||||||||||| | || ||| ||||||  |||||||||    
T  1117321 tattttatcattcgttatagaaacaacttacacataatcacttatatgataagcactaatgatataagtacttaattaa 1117243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 20672762 - 20672696
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||| || |||||||||| ||||||||| |||  || |||||| |||||||||||||||||    
T  20672762 aaaacagtttgactttattttatcttttgttatataaagggcatacacataagcacttatatgataa 20672696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 34788495 - 34788573
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||| ||||| ||| || |||||||||| || || |||||||||||||| ||  ||||| |||||||||||    
T  34788495 atagcttatatggaaacagtttgactttattttatctttggtcataaaaatagcttatacgtaagcatttatatgataa 34788573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 157
Target Start/End: Original strand, 39866743 - 39866777
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctt 157  Q
    ||||||||||||||||||||||| |||||||||||    
T  39866743 cataagctgttttcagtttattttcataagctctt 39866777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 41336720 - 41336818
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||||||||| ||  ||||||||| ||||| ||||||||   ||| ||| ||||| |||| |||||| | |||||| |||||||  ||||||||    
T  41336720 atatgaaaacaatttgactatattttatcttttgtcataaaaatgatttatacataagcatttatttgataaacgcttatgctataagcaattaattaa 41336818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 3645884 - 3645977
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataa 268  Q
    |||||| ||||||||| | ||| |  || ||||||  ||| ||||| |||||||||| ||| ||||||||||||||||| | |||||| |||||    
T  3645884 atagcttatatgaaaatagtttgattttgttttatattttcttatagaaatagcttatacacaagcacttatatgataaacacttatgctataa 3645977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 7008612 - 7008526
Alignment:
Q  192 aatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||| || ||||||||||  |||||||| |||||| ||| |||||| |  || |||||||| | |||||| |||||||||||||||||    
T  7008612 aatttgactttattttatccattgttatagaaatagattatacaaaatc--ttttatgataaacgcttatgctataagcgcttaattaa 7008526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 8062202 - 8062137
Alignment:
Q  215 gttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||| |||| || || ||| |||||||| |||||||| | ||||| ||||||||||||||||||    
T  8062202 gttatataaatggcgtatacataagcacttctatgataaacgcttatagtataagcgcttaattaa 8062137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 37444485 - 37444554
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    |||| ||| |||||||||||||| ||| |||||| |||||||||  ||||||||| ||| |||| |||||    
T  37444485 agcttatacgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttat 37444554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 42215313 - 42215370
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatag 178  Q
    |||||||||||||||||| |||||| ||||||||||  || ||||  |||||||||||    
T  42215313 ttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaatag 42215370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 3537099 - 3537163
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaag 239  Q
    |||||| ||| ||||||||||| || |||||||||| |||| |||| |||| ||||| |||||||    
T  3537099 atagcttatacgaaaacaatttgactttattttatcttttgctatagaaattgcttatacaaaag 3537163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 6950382 - 6950346
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttag 160  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  6950382 ataagttgttttcagcttatttccataagctctttag 6950346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 7878554 - 7878653
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| ||||||||||||||| || |||||||| || |||||||| | |  |||||  || || ||||||||||||||||  ||||| ||||||| |||    
T  7878554 atagcttatatgaaaacaatttgactttatttta-cacttgttatagacagggcttatgcataaacacttatatgataatcatttatgttataagcactt 7878652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 8536153 - 8536221
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||| |||||||||| ||| |||||||||||||| || |  | ||||||||||| || ||||||    
T  8536153 tttgttatagaaatagcttatacataagcacttatatgacaagcattcatggtataagcactcaattaa 8536221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 10114479 - 10114396
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat-atgataatctcttatggtataagc 270  Q
    ||||||||| ||| |||||||||| |||| |||| |||||||||| ||| |||||||||| || |||| | |||||| |||||||    
T  10114479 aaaacaattcaac-ttattttatcttttgctatagaaatagcttatacataagcacttatcatcataaccacttatgctataagc 10114396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 11183605 - 11183573
Alignment:
Q  124 ataagctgttttcagtttatttccataagctct 156  Q
    ||||||||||||||| |||||||||||||||||    
T  11183605 ataagctgttttcagcttatttccataagctct 11183573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 31862554 - 31862502
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||| |||||| |||||||||| ||| |||  |||||||||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaa 31862502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 35298572 - 35298624
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||| |||||||   |||||||||| ||| |||||||||||||||||    
T  35298572 ttattttatcttttgttactgaaatagcttatacataagcacttatatgataa 35298624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 35374441 - 35374493
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    |||||| |||||||||||||||||| |||||||||| || | |||| ||||||    
T  35374441 atagcttatatgaaaacaatttaactttattttatctttcgctatagaaatag 35374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 35869813 - 35869737
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaat 277  Q
    |||||||||  |||||| || |||| ||||| ||| ||| |||||||||||||   |||||| ||||||||||||||    
T  35869813 ttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtgcttatgctataagcgcttaat 35869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 176 - 280
Target Start/End: Complemental strand, 35459911 - 35459807
Alignment:
Q  176 tagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctta 275  Q
    ||||| ||| ||||||||||| || |||||||||| |||| |||| |||||||||| |||||| |||||||||||||| | |||||| |||||| ||| |    
T  35459911 tagcttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgataaacacttatgctataagagctga 35459812  T
Q  276 attaa 280  Q
    |||||    
T  35459811 attaa 35459807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 18962106 - 18962184
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||||| |||||| |||||||||| |||||||||||||||||| | ||| ||||||||| |||||||    
T  18962106 atagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcacttacatgataa 18962184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 253
Target Start/End: Original strand, 33267556 - 33267662
Alignment:
Q  147 cataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    ||||||||||  || |||| |||| |||| |||| ||||||||||| |||||| ||||||||   ||||||||| |||||| ||| ||| ||||||||||    
T  33267556 cataagctctccagcatagcttataaaaacagcttatatgaaaacagtttaactttattttactgtttgttatagaaatagattatacataagcacttat 33267655  T
Q  247 atgataa 253  Q
    |||||||    
T  33267656 atgataa 33267662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 32821870 - 32821818
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  32821870 cataagctgttttcagtttatttctataagctctttaggatagcttatgaaaa 32821818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 14209287 - 14209201
Alignment:
Q  167 ttatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||| |||||||| ||||||||||| ||| |  |||||||||| ||||||||  |||||||||| ||| || ||||||||||||||    
T  14209287 ttatggaaatagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgataa 14209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 22681192 - 22681304
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaa-------atagctcatatgaaaacaatttaaccttattttatcatt 213  Q
    ||||||||||||||| || ||||||||||||| ||| ||| |||||||||||||       |||||| |||||||||||||||  | || ||||||| ||    
T  22681192 ttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttt 22681291  T
Q  214 tgttataaaaata 226  Q
    |||| ||||||||    
T  22681292 tgttttaaaaata 22681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 25661162 - 25661082
Alignment:
Q  129 ctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatc 210  Q
    |||||||||| |||||||||||||||||| || |||| ||| ||||||| || | ||||||||| ||||| |||||||||||    
T  25661162 ctgttttcagattatttccataagctcttcaggatagtttacgaaaataacttacatgaaaacagtttaa-cttattttatc 25661082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 3673802 - 3673734
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatga 250  Q
    |||||||||||||||||| |||||||||  ||||||||| ||||| || | ||| ||||||||||||||    
T  3673802 atatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatga 3673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 10190255 - 10190203
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||| |||||||||||||||| ||| ||| |||||||||||||||||    
T  10190255 ttattttatcctttgttataaaaatagtttatacataagcacttatatgataa 10190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 290
Target Start/End: Original strand, 11393433 - 11393549
Alignment:
Q  175 atagctcatatgaaaac-aatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgct 273  Q
    |||||| |||||||||| ||||| |  ||||| |||| |||| |||| |||||||||| | | ||||||||||||||||| | ||| || |||||| |||    
T  11393433 atagcttatatgaaaacgaatttgaatttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataagtgct 11393532  T
Q  274 taattaaccggtttatc 290  Q
    ||||||| | |||||||    
T  11393533 taattaagctgtttatc 11393549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 290
Target Start/End: Original strand, 11410094 - 11410210
Alignment:
Q  175 atagctcatatgaaaac-aatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgct 273  Q
    |||||| |||||||||| ||||| |  ||||| |||| |||| |||| |||||||||| | | ||||||||||||||||| | ||| || |||||| |||    
T  11410094 atagcttatatgaaaacgaatttgaatttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataagtgct 11410193  T
Q  274 taattaaccggtttatc 290  Q
    ||||||| | |||||||    
T  11410194 taattaagctgtttatc 11410210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Complemental strand, 28902079 - 28902007
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttata 247  Q
    |||||| ||||||||||| |||||  |||||||| | | |||||||||||||||||| ||| |||||||||||    
T  28902079 atagcttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataagcacttata 28902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 40837448 - 40837552
Alignment:
Q  127 agctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaata 226  Q
    |||| ||||||| |||||||||||||||||  |  |||| |||| |||| | |  ||||||||||||||| || ||| |||||| ||||||||| |||||    
T  40837448 agctattttcagcttatttccataagctctacatgatagcttattaaaacaacatatatgaaaacaatttgactttaatttatcttttgttatagaaata 40837547  T
Q  227 gctta 231  Q
    |||||    
T  40837548 gctta 40837552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 3059286 - 3059335
Alignment:
Q  126 aagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||||||||||||| |||| ||| |||| |||||||||    
T  3059286 aagctgttttcagtttatttccataaactctctagcatagcttatgaaaa 3059335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 3102669 - 3102580
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaaccggtttatc 290  Q
    |||||||||  |||| ||||||||||||||| ||| ||||| ||||||||||| |  ||||| | |||||||||||| || | |||||||    
T  3102669 ttattttatattttgctataaaaatagcttatacataagcagttatatgataaacatttatgttttaagcgcttaataaagctgtttatc 3102580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 17952770 - 17952847
Alignment:
Q  176 tagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||| ||||||||| | ||| || |||||||||| ||||||||| |||||||||| | | |||| ||||||||||||    
T  17952770 tagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataa 17952847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 31739980 - 31740082
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataa 221  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |  ||      |||||| ||||||||| | ||| || |||||||||| || ||||||     
T  31739980 tcataagctgttttcagattatttccataagctctctagaacaactt------atagcttatatgaaaatagtttgactttattttatctttagttatag 31740073  T
Q  222 aaatagctt 230  Q
    |||||||||    
T  31740074 aaatagctt 31740082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 1647298 - 1647250
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattat 170  Q
    ||||||||||||||||| ||||||||||||||||| || ||||| ||||    
T  1647298 tcataagctgttttcagcttatttccataagctctctataatagcttat 1647250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 1939341 - 1939456
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaa------atagctc-atatgaaaacaatttaaccttattttatcatttg 215  Q
    |||||||||||||||  |||||||||||||||||  || |||| ||||||||      ||||||| ||||||||| | ||| || |||||||||| ||||    
T  1939341 cataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacagttatagctcaatatgaaaatagtttcactttattttatcttttg 1939440  T
Q  216 ttataaaaatagctta 231  Q
    ||||| ||||| ||||    
T  1939441 ttatagaaataactta 1939456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 7825243 - 7825183
Alignment:
Q  186 gaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    ||||| |||||||| ||| |||||| |||||||||||||||||||| ||| || |||||||    
T  7825243 gaaaaaaatttaactttactttatcttttgttataaaaatagcttatacagaaacacttat 7825183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 15305647 - 15305603
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||    
T  15305647 aaaataatttaacattattttatcatttgctataaaaatagctta 15305603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 42420374 - 42420418
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||    
T  42420374 aaaacaatttaacgttattttatcttttgctataaaaatagctta 42420418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 43808576 - 43808473
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaa-tagcttacacaaaagcacttatatgataatctcttatggtataagcgctta 275  Q
    |||| ||||||||| | |||||| |||||||||  ||||||||||||| ||||||| ||| || |||||||||||||  | |||||| ||||| | ||||    
T  43808576 agcttatatgaaaatagtttaactttattttatg-tttgttataaaaaatagcttatacataaacacttatatgatacgcgcttatgctataaacactta 43808478  T
Q  276 attaa 280  Q
    |||||    
T  43808477 attaa 43808473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 4026807 - 4026748
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    |||| |||||||| |||||||||| |||| ||||||||||||||| | | ||||||||||    
T  4026807 aaaataatttaactttattttatcttttgctataaaaatagcttatagataagcacttat 4026748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 280
Target Start/End: Original strand, 29316853 - 29316948
Alignment:
Q  185 tgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||||||||||||||||||| | ||||| | | |||||||| ||| ||| |||||| || ||||  |||||| | ||| | |||||||||    
T  29316853 tgaaaacaatttaaccttattttatcttctgttaaagatatagcttagacataagtacttatttggtaattccttatgctgtaaacacttaattaa 29316948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 29729917 - 29729842
Alignment:
Q  185 tgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctctta 260  Q
    |||||||| ||| || ||| |||||| ||||||||||||||||| || ||  ||||||||||| ||||||| ||||    
T  29729917 tgaaaacagtttcactttaatttatcttttgttataaaaatagcatatacgtaagcacttatacgataatcactta 29729842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 36114409 - 36114350
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    ||||||||||||| |||||||||| ||||| |||||||||||| | | | ||||||||||    
T  36114409 aaaacaatttaactttattttatcttttgtcataaaaatagctaatatataagcacttat 36114350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 7871705 - 7871647
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||||| ||||||||| |||||||||||||||||| | || || ||||||||| ||||    
T  7871705 tcataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaaacagct 7871647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 10198487 - 10198541
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    ||||||||||||| |||| |||||||||||| |||| ||| ||||||||| ||||    
T  10198487 ttcataagctgttgtcagcttatttccataatctctctaggatagattataaaaa 10198541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 28803575 - 28803693
Alignment:
Q  176 tagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctta 275  Q
    ||||| |||||||| || ||| || |||||||||| ||||||||  ||||| |||| | | ||||||||||||||||| |  |||||  |||| | ||||    
T  28803575 tagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataaacactta 28803674  T
Q  276 attaaccggtttatcataa 294  Q
    ||||| | |||||| ||||    
T  28803675 attaaactgtttatgataa 28803693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 33197320 - 33197410
Alignment:
Q  188 aaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatt 278  Q
    |||||| || || ||||| |||| ||||||||| |||||||||| | | ||||||||||||||||| |  ||||| |||||| | ||||||    
T  33197320 aaacaacttgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagtgtttaatt 33197410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 41817222 - 41817172
Alignment:
Q  130 tgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||||||| |||||||||||||||||  || |||| ||||||||||||||    
T  41817222 tgttttcagcttatttccataagctctccaggatagtttatgaaaatagct 41817172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 44606164 - 44606234
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||   | |||||||||| |||||||| ||||||||||| ||| || ||||||||| ||||    
T  44606164 tatgaaaacaattggtctttattttatcttttgttatgaaaatagcttatacataaacacttatataataa 44606234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 3235391 - 3235523
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcata--tga----aaacaatttaaccttattttatcattt 214  Q
    |||||||||||||||||| |||||||||||| || || |  ||||  |||||||| |||| |||  | |    ||||| ||| || ||||||| ||||||    
T  3235391 ttcataagctgttttcagcttatttccataaacttttcaagatagtatatgaaaacagcttatagtttatatgaaacagtttgactttatttt-tcattt 3235489  T
Q  215 gttataaaaatagcttacacaaaagcacttatat 248  Q
    ||||||||||||||| | ||| ||||||||||||    
T  3235490 gttataaaaatagctaatacataagcacttatat 3235523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 5998789 - 5998826
Alignment:
Q  194 tttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  5998789 tttaactttattttatcttttgttataaaaatagctta 5998826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 11344360 - 11344425
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatat 248  Q
    |||||||||||||| || || ||||||| ||||||||| ||||| ||||  || ||||||||||||    
T  11344360 tatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttatat 11344425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 11513900 - 11513800
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| ||||||||||||||| || |||||||||| |||||| |   |||| |||| ||| || | ||||||||||||   |||||| |||||| ||||    
T  11513900 atagcttatatgaaaacaatttgactttattttatcttttgttgt---aataacttatacataaacccttatatgataagtgcttatgttataagggctt 11513804  T
Q  275 aatt 278  Q
    ||||    
T  11513803 aatt 11513800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 16551827 - 16551880
Alignment:
Q  101 tggaaagatcttacgaaatattcataagctgttttcagtttatttccataagct 154  Q
    ||||||||||||| || |||| |||||| ||| ||||| |||||||||||||||    
T  16551827 tggaaagatcttatgacatatacataagttgtattcagcttatttccataagct 16551880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 1160750 - 1160782
Alignment:
Q  124 ataagctgttttcagtttatttccataagctct 156  Q
    ||||| |||||||||||||||||||||||||||    
T  1160750 ataagttgttttcagtttatttccataagctct 1160782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 5045251 - 5045295
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcactta 245  Q
    |||||||||| |||||||||||||||||||| ||| || ||||||    
T  5045251 ttattttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 11063252 - 11063220
Alignment:
Q  125 taagctgttttcagtttatttccataagctctt 157  Q
    |||||||||||||| ||||||||||||||||||    
T  11063252 taagctgttttcagcttatttccataagctctt 11063220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 13736303 - 13736359
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||||||||||||  |||||| |||||||||| ||| |||| ||||||||| ||||    
T  13736303 ataagctgttttcaagttattttcataagctctctagtatagcttatgaaaacagct 13736359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 29318834 - 29318770
Alignment:
Q  215 gttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatta 279  Q
    ||||||||| |||||||   | ||||||||||||||||| | |||||| | ||||||||||||||    
T  29318834 gttataaaagtagcttatgtataagcacttatatgataagcacttatgttttaagcgcttaatta 29318770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 31461423 - 31461363
Alignment:
Q  192 aatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgata 252  Q
    ||||| || |||||||||| ||||||||| |||||||||| | | || |||||||||||||    
T  31461423 aatttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgata 31461363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 31561833 - 31561877
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||||||| ||||| | ||||||||    
T  31561833 aaaacaatttaactttattttatcatttattatagatatagctta 31561877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 43141932 - 43141880
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||| |||||||| ||||||||||||| ||||| || |||| |||||||||    
T  43141932 cataagttgttttcattttatttccataaactcttcaggatagcttatgaaaa 43141880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 43279607 - 43279651
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||| || |||||||||| |||| |||||||||||||||    
T  43279607 aaaacaatttcacattattttatcttttgatataaaaatagctta 43279651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 43456790 - 43456858
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||||||| |||||| |||  ||||||||| ||||||   |||||| |||||| ||||||||||    
T  43456790 tttgttataaaaaaagcttatacattagcacttatgtgataaatgcttatgctataagtgcttaattaa 43456858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 44443295 - 44443251
Alignment:
Q  202 tattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    ||||||||| ||||| |||||||||||||| ||| ||||||||||    
T  44443295 tattttatcttttgtaataaaaatagcttatacataagcacttat 44443251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 45229502 - 45229458
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||||| |||||||| |||| |||| ||||||||||    
T  45229502 aaaacaatttaacctcattttatcgtttgctatagaaatagctta 45229458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 245
Target Start/End: Complemental strand, 27140539 - 27140417
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaa 222  Q
    |||||| ||||||||| |||||| ||||||||||  |  |||| |||| |||| |||| |||| ||||||||||||  |||||||||| ||||||||| |    
T  27140539 cataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttatataaaaacaatttaatattattttatcttttgttataga 27140440  T
Q  223 aatagcttacacaaaagcactta 245  Q
    |||| |||||||| || ||||||    
T  27140439 aataacttacacataaacactta 27140417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 290
Target Start/End: Original strand, 29793988 - 29794105
Alignment:
Q  172 aaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcg 271  Q
    ||||||||| || |||||||||||| || |||||||||| ||||||| ||||||||| || ||| || ||| ||||||| || | |||||| ||||||||    
T  29793988 aaaatagcttatttgaaaacaatttgac-ttattttatcttttgttacaaaaatagcctatacataaacacatatatgaaaaacacttatgctataagcg 29794086  T
Q  272 cttaattaaccggtttatc 290  Q
    ||||||||| | |||||||    
T  29794087 cttaattaagctgtttatc 29794105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 270
Target Start/End: Complemental strand, 10744364 - 10744214
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||||||||  ||||||  ||||| ||| ||  | || ||||||||| |||| ||| |||||||||| ||| |||||||||| ||| | ||     
T  10744364 ttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttataggaaaacaattcaactttattttatcttttttcatc 10744265  T
Q  221 aaaatagcttacacaaaagcacttat-atgataatctcttatggtataagc 270  Q
    ||||||||||| |||  ||||||| | ||||||| | |||||| |||||||    
T  10744264 aaaatagcttatacattagcacttgtcatgataagcgcttatgctataagc 10744214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 44236612 - 44236705
Alignment:
Q  188 aaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaac 281  Q
    ||||| || ||| ||||||||||||||||||||  ||||||||  ||| || ||||||| |||||| | |||||| |||||| |||||||||||    
T  44236612 aaacagttcaactttattttatcatttgttataggaatagcttctacacaaacacttatgtgataagcacttatgctataagtgcttaattaac 44236705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 45990126 - 45990211
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctctta 260  Q
    |||||| ||||||||||||||| || |||||||||| |||| |||||||||||| || |||  |||| || |||||||| ||||||    
T  45990126 atagcttatatgaaaacaattttactttattttatcttttgatataaaaatagcatatacattagcatttgtatgataagctctta 45990211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 871045 - 870969
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||| ||||||||| || || || | |||||||| |||||||||||||||| ||| ||| |||||||||||||||||    
T  871045 agcttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataa 870969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 7274015 - 7274099
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtata 267  Q
    |||||||||||||| || |||||| ||| ||||||||||||||| | || ||| ||||| ||||||||||| | |||||| ||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatttatatgataagcacttatgctata 7274099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 23895373 - 23895233
Alignment:
Q  140 ttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaag 239  Q
    ||||||||| |||||||  |  |||| |||| ||||||||  |||||| |||| ||| |  |||||||||| ||||||||| |||||||||| ||| ||     
T  23895373 ttatttccacaagctctccaagatagtttataaaaatagcatatatgagaacagtttgaatttattttatcttttgttatagaaatagcttatacataat 23895274  T
Q  240 cacttatatgataatctcttatggtataagcgcttaattaa 280  Q
     |||||||||||||   |||||| | |||| ||||||||||    
T  23895273 aacttatatgataagggcttatgctttaagtgcttaattaa 23895233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 37593691 - 37593808
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||||||||| |||||| ||||||||||| | ||||| |||||||        ||| ||||||||| |||| |||||||||| | |||||||    
T  37593691 ttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaa--------atacgaaaacaatctaacattattttatcttgtgttata 37593782  T
Q  221 aaaatagcttacacaaaagcacttat 246  Q
     ||||| |||| ||| || |||||||    
T  37593783 gaaataccttatacataaacacttat 37593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 37842000 - 37841944
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||  |||||||||    
T  37842000 atagcttatacgaaaacaatttaactttattttatcatttgttataggaatagctta 37841944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 4200231 - 4200128
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| |||||||||||| || || |||||||||| ||||||||||||||| |||| | | || |||||| |||||||   |||||| |||| || |||    
T  4200231 atagcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttatgctatacgcactt 4200132  T
Q  275 aatt 278  Q
    ||||    
T  4200131 aatt 4200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 34619458 - 34619517
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||| ||| ||||| ||||    
T  34619458 aaaacaatttaaccttattttatcttttgttatagaaatggcttatacataagcaattat 34619517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 280
Target Start/End: Original strand, 43029412 - 43029573
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcata------tgaaaacaatttaaccttattttatcatttgtt 217  Q
    ||||||| ||||||| ||||||||||||||| |  ||||||| ||||||||||| ||||||       | ||||| ||| |  |||||||||| ||||||    
T  43029412 ataagctattttcagcttatttccataagctttaaagaatagcttatgaaaatacctcataacttataggaaacagtttgaatttattttatcttttgtt 43029511  T
Q  218 ataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
     || |||||| ||| ||| ||||||| |||| |||||| |||||| || ||| ||||||||||    
T  43029512 gtagaaataggttatacataagcactcatat-ataatcacttatgctaaaagtgcttaattaa 43029573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 290
Target Start/End: Complemental strand, 49557143 - 49557028
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| | ||||| || ||||||| |||||||||| ||||||||| ||||| |||| |||  ||||||||||||||||    ||| | ||||||| |||    
T  49557143 atagcttaaatgaatactatttaactttattttatcttttgttatagaaataacttatacagcagcacttatatgataagtgattacgttataagcactt 49557044  T
Q  275 aattaaccggtttatc 290  Q
    |||||| | |||||||    
T  49557043 aattaagctgtttatc 49557028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 5047212 - 5047150
Alignment:
Q  118 atattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||||||| ||||||||||| |||||||||||||||||| |  |||| ||||||||| ||||    
T  5047212 atattcatacgctgttttcagcttatttccataagctcttcatgatagcttatgaaaaaagct 5047150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 44032067 - 44032145
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||||||||| || |||||||| | ||||||||| |||  ||||| ||| || ||||||||||||||    
T  44032067 atagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataa 44032145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 48748659 - 48748728
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||||||||| |||||| ||| |||| |||| |||||||||| ||| |||||| ||||||||||    
T  48748659 tatgaaaacaatttaactttatttcatcttttg-tatagaaatagcttatacataagcacatatatgataa 48748728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 49517072 - 49516966
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacaca-aaagcacttatatgataatctcttatggtataagcgct 273  Q
    |||||| | ||||||||||||| || |||||||||| ||||||||| ||||| |||| ||| |||  | ||||||||||| | |||||| | ||||| ||    
T  49517072 atagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttatacacaaacaatttatatgataaacgcttatgttttaagcact 49516973  T
Q  274 taattaa 280  Q
    |||||||    
T  49516972 taattaa 49516966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 51929783 - 51929841
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    |||||||||| |||| | ||||||||||||||||| |||||||| ||||||||| ||||    
T  51929783 tcataagctgatttcggcttatttccataagctctctagaatagcttatgaaaacagct 51929841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 37416874 - 37416837
Alignment:
Q  115 gaaatattcataagctgttttcagtttatttccataag 152  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  37416874 gaaatgttcataagctgttttcagtttatttccataag 37416837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 6933037 - 6933105
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgat 251  Q
    |||||||||||||| || |||||||||  |||||||||||||| ||||| |||  ||||||||| ||||    
T  6933037 tatgaaaacaatttgactttattttatgttttgttataaaaatggcttatacatgagcacttatttgat 6933105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 2522683 - 2522596
Alignment:
Q  130 tgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgtt 217  Q
    ||||||||  ||||||||||||  |||  ||||||| ||||||||| |||| |||| ||| || |||||| |||||||||| ||||||    
T  2522683 tgttttcaacttatttccataaattctccagaatagtttatgaaaacagcttatataaaatcagtttaactttattttatcttttgtt 2522596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 6279460 - 6279405
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatag 178  Q
    |||||| |||||||||  |||||||||||||||| ||| |||| ||||||||||||    
T  6279460 cataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatag 6279405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 6292556 - 6292497
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    |||||||||||||||||| |||||| ||||||||||  | ||||| ||| ||||||||||    
T  6292556 ttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagct 6292497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 13037836 - 13037761
Alignment:
Q  205 tttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||| ||||||||| |||||||||| ||| |||||||||||||| ||   |||| | |||||||| ||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatatgacaagaacttaagttataagcgtttaattaa 13037761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 7262525 - 7262579
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||||  ||||||||| |||||||| || |||| |||||||||    
T  7262525 ttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaa 7262579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 15687142 - 15687196
Alignment:
Q  176 tagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctt 230  Q
    ||||| ||| |||||||||||||| |||||||||  ||||||||| |||||||||    
T  15687142 tagcttatacgaaaacaatttaactttattttatattttgttatagaaatagctt 15687196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 36070237 - 36070199
Alignment:
Q  190 acaatttaaccttattttatcatttgttataaaaatagc 228  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  36070237 acaatttaactttattttatcttttgttataaaaatagc 36070199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 38651485 - 38651555
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||  || ||| |||||| ||||||||| || ||||||| ||| ||||||||| |||||||    
T  38651485 tatgaaaacaattcgactttagtttatcttttgttatagaattagcttatacataagcacttacatgataa 38651555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 40304129 - 40304227
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||||||| | |  |||||||||| ||||||||| |||||||||| ||  ||||| | ||||||||| | ||||   |||||| ||||||||||    
T  40304129 atatgaaaacaatgtgattttattttatcttttgttatataaatagcttatacctaagcaataatatgataaacacttacactataagtgcttaattaa 40304227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 46499934 - 46499996
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatg 249  Q
    |||||||||| || |||||||||| ||| ||||| |||||||||| | | |||||||||||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttatatg 46499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 5941522 - 5941571
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||| ||| || |||||||||||| |||||| |||||||||||    
T  5941522 atatgaaaacagtttgactttattttatcatctgttatcaaaatagctta 5941571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 8852851 - 8852806
Alignment:
Q  186 gaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||| |||| |||||||||| |||||| |||||||||||||    
T  8852851 gaaaacaatataactttattttatcttttgttgtaaaaatagctta 8852806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 26184809 - 26184776
Alignment:
Q  123 cataagctgttttcagtttatttccataagctct 156  Q
    |||||||||||||||| |||||||||||||||||    
T  26184809 cataagctgttttcagattatttccataagctct 26184776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 28083308 - 28083353
Alignment:
Q  132 ttttcagtttatttccataagctctttagaatagattatgaaaata 177  Q
    ||||||| |||||| |||||||||||||| ||||||||||| ||||    
T  28083308 ttttcagcttattttcataagctctttaggatagattatgataata 28083353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 40357963 - 40358032
Alignment:
Q  184 atgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||||| || ||||||||||  |||||||| |||||||||| ||| |  ||||||||| ||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacatagtcacttatataataa 40358032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 43722154 - 43722219
Alignment:
Q  110 cttacgaaatattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    ||||||| || || ||||||| || |||||||||||  ||||||||| |||||||| |||||||||    
T  43722154 cttacgacatgtttataagcttttctcagtttattttaataagctctctagaatagcttatgaaaa 43722219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 45170401 - 45170466
Alignment:
Q  184 atgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatg 249  Q
    ||||| |||||| ||| ||||| |||| |||||||||||||||||||  | | |||||||||||||    
T  45170401 atgaagacaattgaactttattctatcttttgttataaaaatagcttctaaataagcacttatatg 45170466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 219558 - 219594
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctt 157  Q
    |||||||||||||||||| | ||||||||||||||||    
T  219558 ttcataagctgttttcagctcatttccataagctctt 219594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 3215782 - 3215730
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||| |||||||||||||| | |||||| |||||||||||| ||| |||||    
T  3215782 cataagttgttttcagtttatgttcataagttctttagaatagcttaggaaaa 3215730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 6074476 - 6074420
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| ||||||||||| |||||| |||| | ||| ||||||||| ||||||||||    
T  6074476 atagcttatatgaaaacagtttaactttatatcatcttttgttatagaaatagctta 6074420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 10586440 - 10586492
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    |||| ||||||||||||||||| || |||||||||| ||| |||||| |||||    
T  10586440 atagttcatatgaaaacaattttactttattttatcttttcttataataatag 10586492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 14737781 - 14737829
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||| || |||||||||| ||||||||| ||||| ||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 17269245 - 17269177
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatga 250  Q
    ||||||||||||||| || |||||||  | |||||| || ||||| |||| ||| ||||||||||||||    
T  17269245 atatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 17830136 - 17830100
Alignment:
Q  195 ttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  17830136 ttaactttattttatcatttgctataaaaatagctta 17830100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 41184730 - 41184770
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    ||||||||||||| |||||||||| |||| |||||||||||    
T  41184730 aaaacaatttaacattattttatcttttgctataaaaatag 41184770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 45145216 - 45145172
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||  |||||||||| |||| |||||||||||||||    
T  45145216 aaaacaatttaatattattttatcttttgctataaaaatagctta 45145172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 46252767 - 46252803
Alignment:
Q  192 aatttaaccttattttatcatttgttataaaaatagc 228  Q
    |||||||| |||||||||| |||||||||||||||||    
T  46252767 aatttaactttattttatcttttgttataaaaatagc 46252803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 47432086 - 47432042
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||  |||||||||||||||    
T  47432086 aaaacaatttaactttattttatctttttctataaaaatagctta 47432042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 48748322 - 48748358
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctt 157  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  48748322 ttcataagttgttttcagcttatttccataagctctt 48748358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 49365905 - 49365957
Alignment:
Q  224 atagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaa 276  Q
    |||||||||||| |||||||||||| |||| |  ||||| |||||||||||||    
T  49365905 atagcttacacataagcacttatattataaacgtttatgctataagcgcttaa 49365957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 50319286 - 50319238
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||| || || |||||||||| ||||||||| ||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagctta 50319238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 7e-16; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 3217265 - 3217360
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaat 277  Q
    ||||||||| ||||| || |||||||||| | | ||| |||||||||||| ||| ||||||||||||||||||| |||||  ||||||| ||||||    
T  3217265 atatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgataatcgcttatactataagcacttaat 3217360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 8349739 - 8349837
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||| ||||||||||||| |||||||||| ||||||| | |||||| ||| ||| || ||||||||||||||    ||||| |||||||||||||||||    
T  8349739 atataaaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataagcgcttaattaa 8349837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 22742368 - 22742281
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatg 262  Q
    |||||| ||||||||||||||| || |||||||||| ||||||||| |||||||||| | | ||| ||||||| ||||| | ||||||    
T  22742368 atagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgcttatg 22742281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 29274297 - 29274375
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||||||||| || |||||||||| |||| |||| |||||||||| ||| ||||| || ||||||||    
T  29274297 atagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataa 29274375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 7351674 - 7351754
Alignment:
Q  173 aaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||| ||||||||||| |||||| |||||||||  ||| ||||| |||||| ||| ||| ||||| |||||||||||    
T  7351674 aaatagcttatatgaaaacagtttaactttattttatagtttattatataaatagtttatacataagcatttatatgataa 7351754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 4006716 - 4006645
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat 246  Q
    |||||| |||| |||||||||| || |||||||||||||||||||| ||||| ||||  || ||||||||||    
T  4006716 atagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 7714025 - 7713950
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgata 252  Q
    |||| ||||||||||||||| || |||||||||| |||||||| ||| ||| ||| ||| |||| |||||||||||    
T  7714025 agcttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgata 7713950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 278
Target Start/End: Original strand, 32386115 - 32386270
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaa 222  Q
    |||||| ||||||||| ||| || |||||||| |  || |||  | ||||||| |||| |||| |||||| ||| || |||||||||| ||| | |   |    
T  32386115 cataagttgttttcagcttactttcataagctttccaggataactaatgaaaacagcttatataaaaacagttttactttattttatcttttctaagtga 32386214  T
Q  223 aatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatt 278  Q
    ||||||||| ||| ||||||||||||||||| || ||||  |||||| ||||||||    
T  32386215 aatagcttatacataagcacttatatgataaacttttatactataagtgcttaatt 32386270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 31624249 - 31624195
Alignment:
Q  186 gaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagc 240  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||| ||| ||||    
T  31624249 gaaaacaatttaaacttattttatcttttgttatagaaatagcttatacacaagc 31624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 31668781 - 31668847
Alignment:
Q  203 attttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataag 269  Q
    |||||||  ||||||||| |||||||||| ||| ||||||||||||||||||  |||||| ||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcacttatatgataattgcttatgctataag 31668847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 244
Target Start/End: Original strand, 2034455 - 2034575
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaa 222  Q
    |||||||||||||||| |||||||  ||||||||  |   ||| ||||||||| |||| ||||||||  | ||| || |||||||||| |||||| ||||    
T  2034455 cataagctgttttcagcttatttcattaagctctacatgttagcttatgaaaaaagcttatatgaaagtagtttgactttattttatc-tttgttgtaaa 2034553  T
Q  223 aatagcttacacaaaagcactt 244  Q
    || |||||| ||| ||||||||    
T  2034554 aacagcttatacataagcactt 2034575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 280
Target Start/End: Complemental strand, 2206592 - 2206487
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    |||||| |||| |||||||||  || |||||||||| ||||||||||||||| |||| ||| ||   |||||| |||||   |||||| ||||||| |||    
T  2206592 atagcttatataaaaacaattatactttattttatcttttgttataaaaataacttatacagaaatgcttatacgataagagcttatgctataagcactt 2206493  T
Q  275 aattaa 280  Q
    ||||||    
T  2206492 aattaa 2206487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 33259788 - 33259723
Alignment:
Q  205 tttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagc 270  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||  || |||||||  |||||||    
T  33259788 tttatcttttgttataaaaatagcttatacataagcacttatatgtaaagctcttatcttataagc 33259723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 281858 - 281972
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaa-------tagctcatatgaaaacaatttaaccttattttatcatttgt 216  Q
    ||||| ||||||||| |||||||||| |||||| ||| |||| ||||||| |       ||||| |||||||||||| || || |||||||||| |||||    
T  281858 ataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgt 281957  T
Q  217 tataaaaatagctta 231  Q
    ||||  |||||||||    
T  281958 tataggaatagctta 281972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 2514704 - 2514604
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgctt 274  Q
    ||||||||||| |||  | ||| || |||||||||| ||| ||||| |||||||||| ||| ||||||||| ||||||| |  ||||| |||||| ||||    
T  2514704 atagctcatataaaattagtttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataagcatttatgctataagagctt 2514605  T
Q  275 a 275  Q
    |    
T  2514604 a 2514604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 3169339 - 3169391
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||| ||||||||| |||||| ||||||| |||||||||||||||||    
T  3169339 ttatttcatcttttgttatagaaataggttacacataagcacttatatgataa 3169391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 9093624 - 9093680
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| ||| |||||||||||||| |||||||||| |||| |||| ||||||||||    
T  9093624 atagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagctta 9093680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 30536468 - 30536424
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||    
T  30536468 aaaacaatttaacattattttatcatttgctataataatagctta 30536424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 33911368 - 33911436
Alignment:
Q  194 tttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatg 262  Q
    |||||| |||||| ||| |||||||||||||||| ||| ||| || ||||||||| |||||| ||||||    
T  33911368 tttaactttatttgatcttttgttataaaaatagattatacataaacacttatattataatcacttatg 33911436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 264380 - 264277
Alignment:
Q  168 tatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat-atgataatctcttatggtat 266  Q
    ||||||||||||| | | |||||| ||||||| |||||||||| |||| | || |||||||||| | | |||||||||| ||||||| | ||| || |||    
T  264380 tatgaaaatagcttagacgaaaacgatttaactttattttatcttttgctttagaaatagcttatatataagcacttatcatgataagcacttgtgctat 264281  T
Q  267 aagc 270  Q
    ||||    
T  264280 aagc 264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 1497979 - 1497904
Alignment:
Q  179 ctcatatgaaaacaatttaaccttattttatcatttg-ttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||| ||| || |||||||| | |||| ||| |||||||||||| ||| ||||||||| |||||||    
T  1497979 ctcatatgaaaacagtttgactttattttaccttttggttaaaaaaatagcttaaacataagcacttaaatgataa 1497904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 4325403 - 4325454
Alignment:
Q  202 tattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||||| ||||| ||||| |||| ||| |||||||||||||||||    
T  4325403 tattttatcatttattatagaaataacttagacataagcacttatatgataa 4325454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 4420706 - 4420671
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctct 156  Q
    |||||||||||||||||| |||||||||||||||||    
T  4420706 ttcataagctgttttcagcttatttccataagctct 4420671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 28130030 - 28130097
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatta 279  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||  | |||||| ||||||| ||||||||    
T  28130030 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaatta 28130097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 32386638 - 32386709
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||||||| ||||||||||||| ||| |||   ||||||  || ||| |||||||||||||||||    
T  32386638 atatgaaaacaatttgaccttattttatcttttcttagtgaaatagtctatacataagcacttatatgataa 32386709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 32578059 - 32578098
Alignment:
Q  216 ttataaaaatagcttacacaaaagcacttatatgataatc 255  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  32578059 ttatagaaatagcttacacataagcacttatatgataatc 32578098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 6537010 - 6536968
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaat 163  Q
    |||||||| ||||||||| |||||||||||||||||| |||||    
T  6537010 ttcataagttgttttcagcttatttccataagctcttcagaat 6536968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 20512654 - 20512704
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaa 174  Q
    ||||| ||||||||| |||||||||||||||||| | ||||| ||||||||    
T  20512654 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 20512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 29269886 - 29269820
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||| || |||||||||| | ||||||| |||||| ||| ||| ||||| |||||||||||    
T  29269886 aaaacaatttgactttattttatcttctgttatagaaatagtttatacacaagcatttatatgataa 29269820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 252
Target Start/End: Complemental strand, 30523722 - 30523586
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa------tagctcatatgaaaacaatttaaccttattttatcattt 214  Q
    |||||||||||||||||  | ||||| |||| ||||  || |||| |||||||||      ||||| ||||||| || |||| || ||||||||||||||    
T  30523722 ttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaaaacttatagcttatatgaagacgatttgacattattttatcattt 30523623  T
Q  215 gttataaaaatagcttacacaaaagcacttatatgata 252  Q
    ||||| |||||| || | ||| | ||||||||||||||    
T  30523622 gttat-aaaataactaagacatacgcacttatatgata 30523586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 33416360 - 33416318
Alignment:
Q  202 tattttatcatttgttataaaaatagcttacacaaaagcactt 244  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||    
T  33416360 tattttatcttttgttataaaaatagcttatacataagcactt 33416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 34403918 - 34403864
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||| ||||||||  ||||||||||||||||||||| | || |||||||||    
T  34403918 ttcataaggtgttttcaccttatttccataagctctttagtacagcttatgaaaa 34403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 2027481 - 2027530
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||| | ||| || |||||||||| ||||||||||||||||||||    
T  2027481 atatgaaaatagtttgactttattttatcttttgttataaaaatagctta 2027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 13360782 - 13360659
Alignment:
Q  137 agtttatttccataagctctttagaatagattatgaaaatagctca-------tatgaaaacaatttaaccttattttatcatttgttataaaaatagct 229  Q
    |||||||||||||||||| ||||| |||| |||| |||||| || |       |||||||||   || || |||||||||  ||||||||| |||||| |    
T  13360782 agtttatttccataagctttttaggatagtttatcaaaataacttacgactcgtatgaaaactgcttgactttattttatattttgttatagaaatagtt 13360683  T
Q  230 tacacaaaagcacttatatgataa 253  Q
    | |||| |||||||||||||||||    
T  13360682 tgcacataagcacttatatgataa 13360659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 25103287 - 25103340
Alignment:
Q  122 tcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    ||||||| |||||||||||||||| | |||||||||||| |||  |||||||||    
T  25103287 tcataagttgttttcagtttattttcttaagctctttaggatatcttatgaaaa 25103340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 28621190 - 28621227
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaa 224  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  28621190 aaaacaatttaactttattttatcttttgttataaaaa 28621227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 4331167 - 4331258
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacaca--aaagcacttatatgataatctcttatggtataagcgcttaattaaccggtttatc 290  Q
    |||||||||| |||||||||||| | || || |||  |||||||||||||||||| |  ||||| ||||||||| | ||||| | |||||||    
T  4331167 ttattttatcttttgttataaaagtcgcctatacatgaaagcacttatatgataaacaattatgttataagcgcgtgattaaactgtttatc 4331258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 8147692 - 8147648
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||| ||| |||||||||| |||| |||||||||||||||    
T  8147692 aaaacaattcaactttattttatcttttgctataaaaatagctta 8147648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 10749303 - 10749390
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagc 270  Q
    ||||||||| |||||||| |||||||||| ||| ||||| ||||| |||| ||| ||   |||||||||||| | |||||| |||||||    
T  10749303 atatgaaaataatttaactttattttatcttttattatagaaata-cttatacataacatcttatatgataaacgcttatgatataagc 10749390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 18076186 - 18076142
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||||||||||| || |||| |||||||||| ||||    
T  18076186 aaaacaatttaaccttattttctcttttgctataaaaataactta 18076142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 28660835 - 28660879
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaata 226  Q
    ||||||||| |||||||| ||||||||||  ||||||||||||||    
T  28660835 atatgaaaataatttaactttattttatctattgttataaaaata 28660879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 30536638 - 30536682
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||| ||||| |||| |||||||||||||||    
T  30536638 aaaacaatttaacgttatcttatcttttgctataaaaatagctta 30536682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 31461651 - 31461575
Alignment:
Q  204 ttttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||| ||||||||| |||||||||| ||| |||||||||||  ||||   |||||  ||||||| |||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcacttatacaataagtgcttataatataagcacttaattaa 31461575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 32975967 - 32975875
Alignment:
Q  188 aaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||| ||| || |||||||||  ||||||| | ||||| |||| ||| || ||||||||||| || | |||||| ||||| |||||||||||    
T  32975967 aaacagtttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaagcgcttatgctataaacgcttaattaa 32975875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 36200094 - 36200015
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||||||||||| | |||||||| | ||| ||| ||||||||||||| |||||||| |||||||||||| ||||    
T  36200094 ttattttatcatttgttacataaatagctgatacataagaacttatatgataagctcttatgttataagcgcttatttaa 36200015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 42809325 - 42809247
Alignment:
Q  153 ctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||| ||| |||||| ||||||| |||| ||||||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  42809325 ctctctaggatagatgatgaaaacagcttatatgaaaacaatttaactatattttatcttttgttatagaaatagctta 42809247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 25964418 - 25964366
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  25964418 ttattttatcttttgttataaaaatagcttatacaaaagaacttatatgataa 25964366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 253
Target Start/End: Complemental strand, 22232821 - 22232750
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||| ||| || |||||||||||||||||||| |||||||||| |||  |||| |||||||||||    
T  22232821 atatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgagcatttatatgataa 22232750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 27792872 - 27792789
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctctta 260  Q
    |||| ||||||||| | ||| ||||||||||||| |||||| |  |||||||||| ||| ||||||||||||||||| ||||||    
T  27792872 agcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatgataaactctta 27792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 2128265 - 2128375
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||||||||| |||||| |||| | |||  |  || | ||||||||| |||| | |  ||||||||||||| |||||||||| |||||||||    
T  2128265 ttcataagctgttttcagcttattttcatacgttctaaaagatggcttatgaaaacagcttacagtaaaacaatttaactttattttatcttttgttata 2128364  T
Q  221 aaaatagctta 231  Q
     ||||||||||    
T  2128365 gaaatagctta 2128375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 16790432 - 16790502
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||| ||||| |  ||||||||||  ||||||||||||||||||| ||| |||||||||||||||||    
T  16790432 tatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 44374720 - 44374790
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||| || |||||||||| ||||||| | | |||||||| ||| |||||||||||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgataa 44374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 15304422 - 15304471
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  15304422 atatgaaaacaatttaactttattttatcttttgttatagaaatagctta 15304471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 37689452 - 37689508
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| ||||||||| |||||||| ||| |||||| ||||||||||||||||||||    
T  37689452 atagcttatatgaaaataatttaactttactttatcttttgttataaaaatagctta 37689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 290
Target Start/End: Complemental strand, 38462342 - 38462168
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa-------tagctcatatgaaaacaatttaaccttattttatcatttg 215  Q
    |||||| ||||||||| ||||||||||||||| | | | |||| |||||||||       ||||  ||||||||||| ||| || |||||||||| ||||    
T  38462342 cataagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttg 38462243  T
Q  216 ttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaaccggtttatc 290  Q
     |||| |||||||||| | | || ||||||||||||||    ||||| | || |||||||||||||  |||||||    
T  38462242 gtatagaaatagcttataaataaacacttatatgataagtgtttatgctttaggcgcttaattaacttgtttatc 38462168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 42808989 - 42808925
Alignment:
Q  167 ttatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||| |||| |||| ||||||||||||| |||||||||| ||||||||| ||| ||||||    
T  42808989 ttatgaaaacagcttatataaaaacaatttaactttattttatcttttgttatagaaacagctta 42808925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 41028918 - 41028997
Alignment:
Q  174 aatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||| || ||||||||  || || ||||||| || ||||||||| |||||||||| ||| |||||||||||||||||    
T  41028918 aatagcttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataa 41028997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 44284134 - 44284217
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtat 266  Q
    |||||||||| ||| || || ||||||  ||||||||| |||||||||| |||  || ||||||||||||||| ||||||||||    
T  44284134 tatgaaaacagtttgactttgttttattttttgttatagaaatagcttatacattagtacttatatgataatcgcttatggtat 44284217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 20669235 - 20669125
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttata 220  Q
    |||||||||||||||| | |||||| ||||||||||  |  |||| ||||||||| |||| |||||| |||| ||| || ||||| |||   ||||||||    
T  20669235 ttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttatatgacaacattttgactttattgtatatcttgttata 20669136  T
Q  221 aaaatagctta 231  Q
     ||||||||||    
T  20669135 gaaatagctta 20669125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 10101551 - 10101600
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||| ||||    
T  10101551 atatgaaaacaatttaactttattttatcttttgttatagaaataactta 10101600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 10212476 - 10212525
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||| ||||    
T  10212476 atatgaaaacaatttaactttattttatcttttgttatagaaataactta 10212525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 20504185 - 20504100
Alignment:
Q  204 ttttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaaccggtttat 289  Q
    ||||||||||||||||| || |||||||  || ||||||||| ||||||| |  ||||  ||||||||||||||||| | ||||||    
T  20504185 ttttatcatttgttatagaagtagcttaggcataagcacttaaatgataagcctttatactataagcgcttaattaagctgtttat 20504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 252
Target Start/End: Original strand, 25459642 - 25459768
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaa 222  Q
    ||||||||||||| || ||||||||| ||||||| |   |||| ||||||||| | || ||||||||| | |||| | |||| ||||| ||||||||||     
T  25459642 cataagctgtttt-agcttatttccacaagctctctgagatagcttatgaaaaaa-cttatatgaaaatagtttatctttatattatc-tttgttataac 25459738  T
Q  223 aatagcttacacaaaagcacttatatgata 252  Q
    ||||| ||| ||||||||||||| ||||||    
T  25459739 aatagtttatacaaaagcacttacatgata 25459768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 28842971 - 28843028
Alignment:
Q  221 aaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatt 278  Q
    ||||||||||| ||| ||||||||||||||||| | |||||| |||||| ||||||||    
T  28842971 aaaatagcttatacataagcacttatatgataagcgcttatgatataagtgcttaatt 28843028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 30322024 - 30322081
Alignment:
Q  118 atattcataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| |||  |||||||||    
T  30322024 atatttataagctgtgttcaatttatttccataagctctttaggataacttatgaaaa 30322081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 34414793 - 34414902
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaa 222  Q
    |||||| ||||||||| |||||| ||||| ||||  |  |||| |||||||||||| || || | |||||||||||| | |||||| || |||| |||||    
T  34414793 cataagttgttttcagcttattttcataaactctccatgatagtttatgaaaatagttcgtacggaaacaatttaacttaattttaccacttgtcataaa 34414892  T
Q  223 aatagcttac 232  Q
    ||||| ||||    
T  34414893 aatagtttac 34414902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 49465751 - 49465796
Alignment:
Q  195 ttaaccttattttatcatttgttataaaaatagcttacacaaaagc 240  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||    
T  49465751 ttaactttattttatcttttgttataaaaatagcttacacataagc 49465796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 52618998 - 52618949
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||||||| |||||| |||||||||| || ||||||||||    
T  52618998 atatgaaaacaatttaactttatttaatcatttgttttagaaatagctta 52618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 21862243 - 21862347
Alignment:
Q  175 atagctcatatgaaaacaatttaacct-tattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgct 273  Q
    |||||| ||||||||||||||| || | ||||||||| ||||| ||| ||| |||||| ||  ||||||||||| ||||| |  ||||| |||||| |||    
T  21862243 atagcttatatgaaaacaatttgacttgtattttatcttttgtaatagaaacagcttatacgcaagcacttataagataaacgtttatgctataagtgct 21862342  T
Q  274 taatt 278  Q
    |||||    
T  21862343 taatt 21862347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 35127451 - 35127535
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttat-atgataatctcttatggtataagc 270  Q
    ||||||||||||| ||| | |||| ||||||||| ||||||| || ||| |||||||||| |||||||   ||||||||||||||    
T  35127451 aaaacaatttaactttagtatatcttttgttatagaaatagcctatacataagcacttatcatgataagagcttatggtataagc 35127535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 44061103 - 44061147
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||    
T  44061103 aaaacaatttaaccttattttatcttttgctatagaaatagctta 44061147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 45433007 - 45433059
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatag 227  Q
    ||||||||||||||||||||||||| | |||||||| ||| ||||| ||||||    
T  45433007 atagctcatatgaaaacaatttaacttcattttatcttttcttatagaaatag 45433059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 49546581 - 49546625
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcactta 245  Q
    |||||||||| ||||||||||||||| |||||||| |||||||||    
T  49546581 ttattttatcttttgttataaaaatatcttacacataagcactta 49546625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 49586984 - 49587040
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||| ||||||||||| ||| || |||||||||| ||||||||| ||||||||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagctta 49587040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 905040 - 905115
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgata 252  Q
    |||| ||||| |||||| || || |||||||||| ||||||||| |||||||||| ||  |||| |||||||||||    
T  905040 agcttatatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 16790182 - 16790249
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataa 268  Q
    |||||||||| ||||||||| ||||| |||| | | ||||||||||||||||| | |||||| |||||    
T  16790182 ttattttatcttttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 22724038 - 22723959
Alignment:
Q  203 attttatcatttgttataaaaatagcttacacaaaagcacttata-tgataatctc-ttatggtataagcgcttaattaa 280  Q
    |||||||| ||||||||| || ||||||| ||| ||||||||||| ||||||  || ||||| |||||||||||||||||    
T  22724038 attttatcttttgttatagaagtagcttaaacataagcacttatactgataaaatctttatgctataagcgcttaattaa 22723959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 49739543 - 49739464
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    |||||||||| |||| | ||||||||||||| |||  | ||||||||||| || | ||||||  ||||||||||||||||    
T  49739543 ttattttatcttttgatgtaaaaatagcttatacatcaccacttatatgaaaagcgcttatgtcataagcgcttaattaa 49739464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 13371177 - 13371127
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaa 174  Q
    ||||| ||||||||| |||||||||||||||||| | ||||| ||||||||    
T  13371177 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 13371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 25183056 - 25183134
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacaca-aaagcacttatatgata 252  Q
    |||||||||||||||| |  ||||| |||||| ||| |||||||||||||||| ||| |||  || |||||||||||||    
T  25183056 atagctcatatgaaaatagcttaactttatttaatcttttgttataaaaatagtttatacattaaacacttatatgata 25183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 26330386 - 26330461
Alignment:
Q  177 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataat 254  Q
    ||||||||||| |||||||| || ||||| | || ||||||||||||||| ||  |||| || |||||||||||||||    
T  26330386 agctcatatgataacaatttgactttattctgtcttttgttataaaaataact--cacataatcacttatatgataat 26330461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 28779358 - 28779280
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||| | ||| || |||||| |||   ||||||||||| |||||| ||||||||| |||||||||||    
T  28779358 atagcttatatgaaaatagtttgactttatttcatctgatgttataaaaacagcttatacaaaagcaattatatgataa 28779280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 253
Target Start/End: Complemental strand, 32703140 - 32703062
Alignment:
Q  175 atagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||| ||||||||||||||| |  |||||||||| ||| | ||| |||||||||| ||| || || |||||||||||    
T  32703140 atagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataa 32703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 34924554 - 34924608
Alignment:
Q  130 tgttttcagtttatttccataagctctttagaatagattatgaaaatagctcata 184  Q
    ||||||||| |||||| |||||||||| ||  |||| ||||||||||||||||||    
T  34924554 tgttttcagcttattttcataagctctctaagatagcttatgaaaatagctcata 34924608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 39971309 - 39971243
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    ||||||||||  | |||||||||| ||||||||| || || |||| ||| |||||||||||||||||    
T  39971309 aaaacaatttggctttattttatcttttgttatataagtaacttatacataagcacttatatgataa 39971243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 43116524 - 43116574
Alignment:
Q  203 attttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||| ||||||||| |||||||||||||| || ||||| ||||||||    
T  43116524 attttatcttttgttatagaaatagcttacacataaacacttgtatgataa 43116574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 48933604 - 48933642
Alignment:
Q  118 atattcataagctgttttcagtttatttccataagctct 156  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  48933604 atattcataagcttttttcagttgatttccataagctct 48933642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 23315676 - 23315639
Alignment:
Q  134 ttcagtttatttccataagctctttagaatagattatg 171  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  23315676 ttcagcttatttccataagctctttagaatagcttatg 23315639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 30669049 - 30669094
Alignment:
Q  186 gaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||| |||| ||| |||||||||| ||||||||||||||||||||    
T  30669049 gaaaaaaattcaacattattttatcttttgttataaaaatagctta 30669094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 34364020 - 34363951
Alignment:
Q  162 atagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||| |||||||||||||| ||||||||||||||  || |||||||||   | |||||| ||||||||||    
T  34364020 atagcttatgaaaatagcttatatgaaaacaattgtacgttattttatatgtagttatagaaatagctta 34363951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 36189556 - 36189491
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgata 252  Q
    ||||||||||||| |||||||||| ||||| | | |||||||||| ||| |  |||||||||||||    
T  36189556 aaaacaatttaactttattttatcttttgtaagagaaatagcttatacatactcacttatatgata 36189491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 237458 - 237406
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||| |||||||| |||||||| ||| |||  |||||||||    
T  237458 cataagctgttttcagcttatttccgtaagctctataggataacttatgaaaa 237406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 279
Target Start/End: Complemental strand, 3758042 - 3757946
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatta 279  Q
    |||||||| | ||| || |||||||||  ||||||| |||||||||||| ||| ||||||||| |  |||| | |||||| || ||| |||||||||    
T  3758042 tatgaaaagagtttgactttattttatattttgttacaaaaatagcttatacataagcacttacacaataaacacttatgctaaaagggcttaatta 3757946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 20880466 - 20880423
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| || |||||||||||| |||||||||||||||    
T  20880466 aaaacaatttaac-ttgttttatcatttgctataaaaatagctta 20880423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 30956706 - 30956750
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||| |||| ||||||||||    
T  30956706 aaaacaatttaactttattttatcttttgctatagaaatagctta 30956750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 30972518 - 30972562
Alignment:
Q  187 aaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    ||||||||||||| |||||||||| |||| |||| ||||||||||    
T  30972518 aaaacaatttaactttattttatcttttgctatagaaatagctta 30972562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 36783409 - 36783457
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctt 230  Q
    ||||||||||||||| || |||||||||| |||| |||| |||||||||    
T  36783409 atatgaaaacaattttactttattttatcttttggtatagaaatagctt 36783457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 41644452 - 41644516
Alignment:
Q  121 ttcataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagctcatat 185  Q
    |||||||||||||||||| |||||||| |||| ||| ||  |||| ||||||||| |||| ||||    
T  41644452 ttcataagctgttttcagcttatttccttaagatctctacgatagcttatgaaaacagcttatat 41644516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 52412914 - 52412970
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaatagct 180  Q
    ||||||||||||||| ||||||||||| ||||| ||| | |  ||||||||||||||    
T  52412914 ataagctgttttcagcttatttccatatgctctctaggacaacttatgaaaatagct 52412970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 27571 - 27473
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaattaa 280  Q
    ||||||||||||||| || |||||||||| | ||||||| ||||| |||| ||| ||||||||| |||||||   |||||| |||||||| ||| ||||    
T  27571 atatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagcgtttatttaa 27473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 21333 - 21402
Alignment:
Q  162 atagattatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||| ||||||||| |||| ||| |||||||||||||| |||||||||| |||  |||||||||||||||    
T  21333 atagcttatgaaaacagcttatacgaaaacaatttaactttattttatcttttcctataaaaatagctta 21402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 58947 - 58879
Alignment:
Q  167 ttatgaaaatagctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacaca 235  Q
    ||||||||| |||| ||| |||||||||||||| |||||||| | |||  |||||||||||||||||||    
T  58947 ttatgaaaacagcttatacgaaaacaatttaactttattttaacttttcctataaaaatagcttacaca 58879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 3876 - 3832
Alignment:
Q  205 tttatcatttgttataaaaatagcttacacaaaagcacttatatg 249  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  3876 tttatcttttgttataaaaatagcttacacataagcacttatatg 3832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 63379 - 63431
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||| |||||||||||||||||||| | | |||||||||||||||||    
T  63379 ttattttatcttttgttataaaaatagcttataaacaagcacttatatgataa 63431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 1168 - 1219
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgata 252  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  1168 ttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

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Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 2807 - 2756
Alignment:
Q  201 ttattttatcatttgttataaaaatagcttacacaaaagcacttatatgata 252  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  2807 ttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 51563 - 51514
Alignment:
Q  182 atatgaaaacaatttaaccttattttatcatttgttataaaaatagctta 231  Q
    |||||||||||||||||| |||||||||  ||||||||||||||| ||||    
T  51563 atatgaaaacaatttaactttattttatattttgttataaaaataactta 51514  T

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Target: scaffold0455 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 8617 - 8684
Alignment:
Q  212 tttgttataaaaatagcttacacaaaagcacttatatgataatctcttatggtataagcgcttaatta 279  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||  | |||||| ||||||| ||||||||    
T  8617 tttgttatagaaatagcttaaacacaagtacttatatgatagacgcttatgctataagcacttaatta 8684  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 159983 - 160034
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||| |||||||| ||||||||| ||||||||||| |||| |||||||||    
T  159983 ataagcagttttcagcttatttccacaagctctttaggatagcttatgaaaa 160034  T

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Target: scaffold0654 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 6713 - 6783
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||| || | | |||||  ||||||||| |||||| ||| ||| |||||||||||||||||    
T  6713 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataa 6783  T

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Target: scaffold0089 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 33637 - 33687
Alignment:
Q  124 ataagctgttttcagtttatttccataagctctttagaatagattatgaaa 174  Q
    ||||| ||||||||| |||||||||||||||||| | ||||| ||||||||    
T  33637 ataagttgttttcagcttatttccataagctcttcataatagcttatgaaa 33687  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 116632 - 116702
Alignment:
Q  183 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatgataa 253  Q
    |||||||||||||| || | | |||||  ||||||||| |||||| ||| ||| |||||||||||||||||    
T  116632 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataa 116702  T

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Target: scaffold0153 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 6504 - 6536
Alignment:
Q  124 ataagctgttttcagtttatttccataagctct 156  Q
    ||||| |||||||||||||||||||||||||||    
T  6504 ataagttgttttcagtttatttccataagctct 6536  T

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Target: scaffold0153; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 13524 - 13556
Alignment:
Q  124 ataagctgttttcagtttatttccataagctct 156  Q
    ||||| |||||||||||||||||||||||||||    
T  13524 ataagttgttttcagtttatttccataagctct 13556  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 306387 - 306335
Alignment:
Q  123 cataagctgttttcagtttatttccataagctctttagaatagattatgaaaa 175  Q
    |||||||||||||||| ||| || |||||||||| ||| |||| |||||||||    
T  306387 cataagctgttttcagcttacttacataagctctctaggatagcttatgaaaa 306335  T

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