View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18644_high_22 (Length: 236)
Name: NF18644_high_22
Description: NF18644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18644_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 35295267 - 35295462
Alignment:
| Q |
18 |
atgaaccggtaatgggacatagaaactctttaggaggttgttgtttggattgagaagaagaacgatggaaggaaattttccacctgtgttttccattgcc |
117 |
Q |
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| T |
35295267 |
atgaaccggtaatgggacatagaaactctttaggaggttgttgtttggattgagaagaagaacgatggaaggaaattttccacctgtgttttccattgcc |
35295366 |
T |
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| Q |
118 |
acccataactgtttattaacttatgaagctgttgttgttgatagtgttttggttaggacataggaatcaggaatataataagaagcataacatagc |
213 |
Q |
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|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35295367 |
acccatgactgttttttaacttatgaagctgttgttgttgatagtgttttggttaggacataggaatcaggaatataataagaagcataacatagc |
35295462 |
T |
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