View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18644_high_23 (Length: 224)
Name: NF18644_high_23
Description: NF18644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18644_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 37542338 - 37542533
Alignment:
| Q |
16 |
aatattattgattgttagcatcgaaccatcaattcttaattac-----tccttaatttaccactaaccctatatctcaaatatatatagatagtgtttag |
110 |
Q |
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| T |
37542338 |
aatattattgattgttagcatcgaaccatcaattcttaattactttactccttaatttaccactaaccctatatctcaaatatatatagatagtgtttag |
37542437 |
T |
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| Q |
111 |
tgttcttatagaattctatgaggcagaagctgtcgttttatttaaacagctccagtgacgttttagcaatcacgttattgaaattgacgtcctaat |
206 |
Q |
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| T |
37542438 |
tgttcttatagaattatatgaggcagaagctgtcgttttatttaaacagctccagtgacgttttagcaatcacgttattgaaattgacgtcctaat |
37542533 |
T |
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