View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18644_low_14 (Length: 289)
Name: NF18644_low_14
Description: NF18644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18644_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 35697442 - 35697182
Alignment:
| Q |
19 |
catcaaatataagacgattcataagttagttcagagtcagcaacacgaggcttattagtgctaccactcttcttatggttaccccctccacaagttattg |
118 |
Q |
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| T |
35697442 |
catcaaatataagacgattcataagttagttcagagtcagcaacacgaggtttattagtgctaccactcttcttatggttaccccctccgcaagttatcg |
35697343 |
T |
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| Q |
119 |
aaatctcacaccctaatgctgttccaaagcacgaaaacaaaccgctaccttgccttcgatgcttacctttacctttccctttcgtttgtttcccagtttt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
35697342 |
aaatctcacaccctaatgctgttccaaagcacgaaaacaaaccgctaccttgccttcgattcttacctttacctttccctttcgtttgtttcccagtttt |
35697243 |
T |
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| Q |
219 |
cttcacactatcattattattattccccaaatgatcataaacctgcggtatatctatctgt |
279 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35697242 |
cttcacactaccattattattattccccaaatgatcataaacctgcggtatatctatctgt |
35697182 |
T |
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