View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
	Query
	Query hiting target	Query hiting target's complemental strand
	Query's complemental strand hiting target	Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18645_high_15 (Length: 328)

Name: NF18645_high_15

Description: NF18645

Algorithm: BLASTN 2.2.26 [Sep-21-2011]

Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)

[»] NF18645_high_15

[»] chr7 (1 HSPs)

Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)

Name: chr7

Description:

Target: chr7; HSP #1

Raw Score: 234; E-Value: 1e-129

Query Start/End: Original strand, 1 - 312

Target Start/End: Original strand, 39846495 - 39846794

Alignment:

Q	1	gttacggtaaactaacagcattttacgggttcttaacaaattcagttccgtcacagatataaaatatagataaagtccaaagttttgattacattaatac	100	Q
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
T	39846495	gttacggtaaactaacagcattttaggggttcttaa----ttcagttccgtcacagatataaaatacagataaagtccaaagttttgattaca-------	39846583	T

Q	101	atttgagggatgctattgatgaagtaaaagcaagcaagttaattactgatgatgatttacaggataaggaattcttgcacgtaaaagaaaaattgttttg	200	Q
		\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|
T	39846584	-tttgagggatgctattgatgaagtaaaagcaaacaagttaattactgatgatgatttacaggataaggaattcttgcacgtaaaaaaaaaattgttttg	39846682	T

Q	201	tttgtgtgcacatatattttaatctagaggaataatcattggcactgacatacatggatgtcaaatcagagagataccactctatgaatcatgactagaa	300	Q
		\|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|
T	39846683	tttgtgtgcacacatattttcatctagaggaataatcattggcactgacatacatggatgtcaaatcagagagataccactctatgaatcatgactagaa	39846782	T

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