View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18648_low_16 (Length: 252)
Name: NF18648_low_16
Description: NF18648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18648_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 237
Target Start/End: Original strand, 660289 - 660511
Alignment:
| Q |
15 |
aatatcaacagcgaagaaaagatcaacaatattgtccacaatgtagagtttcctatttgtagaagagtgcatgaaagcaacttcaaagggataaacccat |
114 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
660289 |
aatatcaacagcgaagaaaagatcaacaatattgtccacaatgtagagtttcctatttgtagaagagtgcatgaaagcaacttcaaagggataaacccat |
660388 |
T |
|
| Q |
115 |
gcagaataagctaccaaaataaccataaaactctcccaacacctgcacaaaaagattactttaatttactctcaataaatttatttgttgcaaccaatta |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
660389 |
gcagaataagctaccaaaataaccataaaactctcccaacacctgcacaaaaagattactttaatttactctcaataaatttatttgttgcaaccaatta |
660488 |
T |
|
| Q |
215 |
atcatctgattattttcaatcat |
237 |
Q |
| |
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||||||||| ||||||||||||| |
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| T |
660489 |
atcatctgaatattttcaatcat |
660511 |
T |
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