View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18649_high_12 (Length: 442)

Name: NF18649_high_12
Description: NF18649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18649_high_12
NF18649_high_12
[»] chr5 (37 HSPs)
chr5 (1-242)||(8437423-8437666)
chr5 (293-432)||(8437712-8437851)
chr5 (318-421)||(13279474-13279576)
chr5 (354-421)||(3933956-3934022)
chr5 (354-426)||(27979262-27979333)
chr5 (371-421)||(14594117-14594166)
chr5 (354-420)||(36762145-36762210)
chr5 (317-396)||(5701095-5701174)
chr5 (318-421)||(15175849-15175951)
chr5 (354-421)||(20183991-20184057)
chr5 (354-421)||(22731037-22731103)
chr5 (371-421)||(12585656-12585705)
chr5 (354-396)||(15175236-15175278)
chr5 (371-421)||(20259981-20260030)
chr5 (354-416)||(36737431-36737492)
chr5 (318-421)||(1406213-1406315)
chr5 (354-394)||(8572730-8572770)
chr5 (357-421)||(20570192-20570255)
chr5 (370-421)||(141596-141646)
chr5 (371-418)||(8573329-8573375)
chr5 (354-421)||(31476389-31476455)
chr5 (374-421)||(38955538-38955584)
chr5 (314-392)||(1405528-1405606)
chr5 (354-392)||(6048016-6048054)
chr5 (354-396)||(9017678-9017720)
chr5 (354-396)||(13280148-13280190)
chr5 (371-421)||(13686016-13686065)
chr5 (347-421)||(40956779-40956852)
chr5 (354-396)||(42598989-42599031)
chr5 (371-420)||(4876758-4876806)
chr5 (372-421)||(19500815-19500863)
chr5 (354-418)||(10687619-10687682)
chr5 (312-396)||(18523171-18523255)
chr5 (318-421)||(19409182-19409285)
chr5 (317-393)||(31476969-31477045)
chr5 (352-392)||(36742587-36742627)
chr5 (369-421)||(36853664-36853715)
[»] chr6 (27 HSPs)
chr6 (311-421)||(12767584-12767693)
chr6 (354-421)||(21802582-21802648)
chr6 (354-421)||(2092315-2092381)
chr6 (362-421)||(6937882-6937940)
chr6 (354-421)||(10702912-10702978)
chr6 (318-421)||(12409407-12409509)
chr6 (371-418)||(14306839-14306885)
chr6 (354-421)||(32114385-32114451)
chr6 (371-421)||(15499474-15499523)
chr6 (371-421)||(31282223-31282272)
chr6 (354-419)||(14224470-14224534)
chr6 (356-421)||(30461473-30461537)
chr6 (341-421)||(21847347-21847426)
chr6 (318-421)||(34793856-34793958)
chr6 (371-426)||(22269019-22269073)
chr6 (371-414)||(22342145-22342187)
chr6 (350-392)||(4100541-4100583)
chr6 (371-421)||(4101102-4101151)
chr6 (371-421)||(4126465-4126514)
chr6 (354-392)||(10702301-10702339)
chr6 (372-414)||(22342236-22342277)
chr6 (354-392)||(32113769-32113807)
chr6 (371-425)||(34250682-34250735)
chr6 (350-391)||(28494895-28494936)
chr6 (350-391)||(29807304-29807345)
chr6 (374-418)||(14313242-14313285)
chr6 (352-420)||(33275782-33275849)
[»] chr8 (34 HSPs)
chr8 (318-421)||(8438545-8438647)
chr8 (354-421)||(17564701-17564767)
chr8 (318-421)||(44284328-44284430)
chr8 (354-420)||(3075945-3076010)
chr8 (354-421)||(36016738-36016803)
chr8 (358-413)||(12336278-12336332)
chr8 (354-421)||(14094128-14094194)
chr8 (318-421)||(30056284-30056386)
chr8 (374-421)||(37836972-37837018)
chr8 (354-420)||(4855913-4855978)
chr8 (371-421)||(8443303-8443352)
chr8 (371-421)||(31740127-31740176)
chr8 (371-421)||(34925383-34925432)
chr8 (371-421)||(40791096-40791145)
chr8 (371-420)||(17734890-17734938)
chr8 (372-421)||(40299565-40299613)
chr8 (317-392)||(11140090-11140165)
chr8 (354-421)||(11141039-11141105)
chr8 (374-421)||(13439478-13439524)
chr8 (354-421)||(14879553-14879619)
chr8 (352-395)||(24809614-24809657)
chr8 (374-421)||(34363963-34364009)
chr8 (354-421)||(37266120-37266186)
chr8 (371-421)||(253573-253622)
chr8 (371-421)||(662236-662285)
chr8 (371-421)||(848034-848083)
chr8 (354-396)||(14880190-14880232)
chr8 (354-396)||(30353877-30353919)
chr8 (354-392)||(31846480-31846518)
chr8 (354-396)||(32904221-32904263)
chr8 (371-421)||(37872845-37872894)
chr8 (371-421)||(44746224-44746273)
chr8 (352-392)||(13422072-13422112)
chr8 (372-420)||(34678646-34678693)
[»] chr7 (34 HSPs)
chr7 (350-421)||(33576669-33576739)
chr7 (371-424)||(8123251-8123303)
chr7 (354-421)||(40401529-40401595)
chr7 (354-421)||(48872042-48872108)
chr7 (371-421)||(22711682-22711731)
chr7 (352-420)||(12677128-12677195)
chr7 (354-418)||(38987783-38987846)
chr7 (354-421)||(2790111-2790177)
chr7 (354-421)||(3391788-3391854)
chr7 (354-421)||(11639927-11639993)
chr7 (354-417)||(31221437-31221499)
chr7 (354-421)||(36688837-36688903)
chr7 (350-420)||(1573732-1573801)
chr7 (371-421)||(5227900-5227949)
chr7 (371-421)||(16425987-16426036)
chr7 (354-396)||(20261035-20261077)
chr7 (371-421)||(32387528-32387577)
chr7 (371-420)||(12679042-12679090)
chr7 (317-397)||(36687291-36687370)
chr7 (354-390)||(43450130-43450166)
chr7 (350-421)||(13068385-13068454)
chr7 (370-421)||(23232911-23232961)
chr7 (354-421)||(29615547-29615613)
chr7 (354-421)||(46011097-46011163)
chr7 (354-396)||(8122658-8122700)
chr7 (371-413)||(20261567-20261608)
chr7 (350-392)||(27144208-27144250)
chr7 (371-421)||(28308648-28308697)
chr7 (354-392)||(35783393-35783431)
chr7 (371-421)||(36848475-36848524)
chr7 (354-392)||(48982544-48982582)
chr7 (372-421)||(10410150-10410198)
chr7 (372-417)||(26200459-26200503)
chr7 (354-418)||(10412636-10412699)
[»] chr3 (37 HSPs)
chr3 (318-421)||(11397584-11397686)
chr3 (354-424)||(13623208-13623277)
chr3 (354-426)||(1262430-1262501)
chr3 (354-416)||(44500025-44500086)
chr3 (354-415)||(30605329-30605389)
chr3 (354-421)||(28247539-28247605)
chr3 (354-421)||(49765106-49765172)
chr3 (354-421)||(54403592-54403658)
chr3 (354-424)||(3090392-3090461)
chr3 (352-421)||(17764939-17765007)
chr3 (352-421)||(19066259-19066327)
chr3 (354-421)||(18364663-18364729)
chr3 (354-421)||(40036373-40036439)
chr3 (354-421)||(40974675-40974741)
chr3 (371-421)||(3541061-3541110)
chr3 (318-424)||(9830271-9830376)
chr3 (371-421)||(27394301-27394350)
chr3 (350-396)||(40928165-40928211)
chr3 (371-421)||(53490708-53490757)
chr3 (354-420)||(54605795-54605860)
chr3 (354-418)||(44950342-44950405)
chr3 (354-421)||(47794630-47794695)
chr3 (354-394)||(49764523-49764563)
chr3 (371-418)||(291159-291205)
chr3 (349-392)||(3089778-3089821)
chr3 (354-421)||(11345336-11345402)
chr3 (341-396)||(22518581-22518636)
chr3 (354-393)||(33115238-33115277)
chr3 (318-421)||(48223557-48223659)
chr3 (371-421)||(10688838-10688887)
chr3 (371-421)||(23682041-23682090)
chr3 (371-421)||(24054278-24054327)
chr3 (354-396)||(32255726-32255768)
chr3 (354-392)||(40927526-40927564)
chr3 (372-421)||(25480578-25480626)
chr3 (354-421)||(49079992-49080056)
chr3 (349-409)||(41587300-41587359)
[»] chr1 (34 HSPs)
chr1 (162-237)||(10753220-10753295)
chr1 (317-421)||(27225669-27225772)
chr1 (354-421)||(33126831-33126897)
chr1 (317-418)||(42831182-42831282)
chr1 (182-238)||(4865225-4865281)
chr1 (341-421)||(10012429-10012508)
chr1 (354-413)||(16536402-16536460)
chr1 (371-426)||(17109352-17109406)
chr1 (349-420)||(25990454-25990524)
chr1 (354-421)||(45737335-45737401)
chr1 (354-421)||(45738030-45738096)
chr1 (371-421)||(36604774-36604823)
chr1 (354-420)||(43320556-43320621)
chr1 (350-426)||(4007579-4007654)
chr1 (349-426)||(47233085-47233161)
chr1 (354-418)||(18406560-18406623)
chr1 (354-421)||(19071742-19071807)
chr1 (354-421)||(19119632-19119697)
chr1 (352-420)||(41575821-41575888)
chr1 (354-426)||(45559737-45559808)
chr1 (352-396)||(47216852-47216896)
chr1 (354-393)||(16537025-16537064)
chr1 (350-421)||(28198101-28198171)
chr1 (354-421)||(47216087-47216153)
chr1 (371-421)||(4667520-4667569)
chr1 (354-392)||(23739822-23739860)
chr1 (352-398)||(29344549-29344595)
chr1 (354-408)||(50143415-50143468)
chr1 (339-392)||(16248513-16248566)
chr1 (371-420)||(31765381-31765429)
chr1 (354-390)||(15356964-15357000)
chr1 (341-421)||(18571943-18572022)
chr1 (375-423)||(28970882-28970929)
chr1 (354-402)||(46682705-46682753)
[»] chr2 (34 HSPs)
chr2 (354-421)||(37199577-37199643)
chr2 (354-421)||(40769347-40769413)
chr2 (371-421)||(3045576-3045625)
chr2 (354-420)||(34173692-34173757)
chr2 (350-418)||(37009640-37009707)
chr2 (354-421)||(1366390-1366456)
chr2 (354-425)||(3515446-3515516)
chr2 (354-424)||(33146065-33146134)
chr2 (371-420)||(31709114-31709162)
chr2 (356-421)||(37329732-37329796)
chr2 (352-421)||(43439776-43439844)
chr2 (354-421)||(6229862-6229928)
chr2 (371-418)||(33476537-33476583)
chr2 (371-421)||(7939374-7939423)
chr2 (316-392)||(15890667-15890743)
chr2 (354-418)||(31597255-31597318)
chr2 (354-421)||(1534197-1534263)
chr2 (354-421)||(4437956-4438022)
chr2 (354-421)||(11796788-11796853)
chr2 (372-415)||(17449769-17449811)
chr2 (318-421)||(22298228-22298330)
chr2 (315-390)||(35954002-35954077)
chr2 (371-421)||(11564446-11564495)
chr2 (354-392)||(13873346-13873384)
chr2 (354-392)||(14013471-14013509)
chr2 (372-421)||(8727342-8727390)
chr2 (376-421)||(32023022-32023066)
chr2 (354-421)||(5790040-5790104)
chr2 (354-394)||(16111170-16111210)
chr2 (354-394)||(18997195-18997235)
chr2 (349-421)||(26196232-26196303)
chr2 (347-421)||(36143280-36143351)
chr2 (354-394)||(37009025-37009065)
chr2 (354-394)||(38910705-38910745)
[»] scaffold0051 (1 HSPs)
scaffold0051 (354-424)||(11604-11673)
[»] chr4 (36 HSPs)
chr4 (354-416)||(35667364-35667425)
chr4 (340-421)||(21037315-21037395)
chr4 (354-421)||(6711263-6711329)
chr4 (318-421)||(8138317-8138419)
chr4 (354-421)||(51019682-51019748)
chr4 (354-421)||(55068874-55068940)
chr4 (371-421)||(7479324-7479373)
chr4 (315-421)||(36898077-36898182)
chr4 (349-413)||(35853584-35853647)
chr4 (354-421)||(16192293-16192359)
chr4 (318-421)||(25010035-25010137)
chr4 (354-421)||(35665983-35666049)
chr4 (318-421)||(53102718-53102820)
chr4 (372-421)||(7479958-7480005)
chr4 (372-418)||(7797594-7797639)
chr4 (318-392)||(16960200-16960274)
chr4 (354-420)||(44664737-44664802)
chr4 (354-395)||(28464232-28464273)
chr4 (371-420)||(45847746-45847794)
chr4 (354-418)||(23722032-23722095)
chr4 (349-421)||(32448918-32448989)
chr4 (341-393)||(36651172-36651224)
chr4 (354-413)||(13482214-13482272)
chr4 (318-421)||(26705029-26705131)
chr4 (349-392)||(53305701-53305744)
chr4 (354-421)||(56309445-56309511)
chr4 (354-396)||(17201946-17201988)
chr4 (318-392)||(26705675-26705749)
chr4 (371-421)||(32963155-32963204)
chr4 (354-416)||(37147770-37147831)
chr4 (350-392)||(37423807-37423849)
chr4 (317-414)||(16960859-16960955)
chr4 (352-421)||(17723397-17723465)
chr4 (354-414)||(9785241-9785300)
chr4 (371-415)||(29979104-29979147)
chr4 (354-390)||(45847166-45847202)
[»] scaffold0037 (1 HSPs)
scaffold0037 (349-418)||(100029-100097)
[»] scaffold0189 (1 HSPs)
scaffold0189 (354-418)||(11320-11383)
[»] scaffold0068 (1 HSPs)
scaffold0068 (354-421)||(59291-59357)
[»] scaffold0368 (1 HSPs)
scaffold0368 (317-418)||(11238-11338)
[»] scaffold0695 (1 HSPs)
scaffold0695 (354-421)||(2254-2320)
[»] scaffold0361 (1 HSPs)
scaffold0361 (318-421)||(17126-17228)
[»] scaffold0034 (1 HSPs)
scaffold0034 (318-421)||(25901-26003)
[»] scaffold0289 (1 HSPs)
scaffold0289 (354-424)||(4022-4091)
[»] scaffold0201 (1 HSPs)
scaffold0201 (354-396)||(15996-16038)
[»] scaffold0102 (1 HSPs)
scaffold0102 (351-421)||(26381-26449)
[»] scaffold0003 (3 HSPs)
scaffold0003 (371-421)||(14700-14749)
scaffold0003 (371-421)||(28846-28895)
scaffold0003 (354-413)||(421178-421236)
[»] scaffold0006 (1 HSPs)
scaffold0006 (350-421)||(161284-161354)
[»] scaffold0001 (1 HSPs)
scaffold0001 (371-426)||(185157-185211)
[»] scaffold0136 (1 HSPs)
scaffold0136 (349-426)||(786-863)
[»] scaffold0971 (1 HSPs)
scaffold0971 (376-421)||(3152-3196)
[»] scaffold0159 (1 HSPs)
scaffold0159 (354-421)||(34413-34477)


Alignment Details
Target: chr5 (Bit Score: 171; Significance: 1e-91; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 8437423 - 8437666
Alignment:
Q  1 aataatatttttagtgtcatttttgttagtaatcttatgaattatattgatcaatgaaaaagactataa-ttaaccactaa-aaatagattgaaagaccg 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||      
T  8437423 aataatatttttagtgtcatttttgttagtaatcttatgaattatattgatcaatgaaaaagactaaaaattaaccactaataaatagattgaaagacta 8437522  T
Q  99 gaaagactnnnnnnngagacacatgttgatatgtttgcttatacattcaacgatttttgaagaagaagtgctatatatccagagagattttaccacgaag 198  Q
    ||||||||       ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  8437523 gaaagactaataaaagagacacatgtggatgtgtttgcttatacattcaacgattttagaagaagaagtgctatatatccatagagattttaccacgaag 8437622  T
Q  199 tgcttgcgaaatagcgtttaaccaataaaaattgctaacgacca 242  Q
    | || |||||||||||||||||||||||||||||||||||||||    
T  8437623 tactcgcgaaatagcgtttaaccaataaaaattgctaacgacca 8437666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 293 - 432
Target Start/End: Original strand, 8437712 - 8437851
Alignment:
Q  293 atgtggtggttagtcaaacaattatgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| |||    
T  8437712 atgtagtggttagtcaaacaattatgagtaaattacactctcttctcttaagaaaagcttaaattacacttccctcacttcttatgttaaaatatatact 8437811  T
Q  393 tcccctctcttgaaaagtaaaatttatacccctccctatg 432  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8437812 tcccctctcttgaaaagtaaaatttatacccctccctatg 8437851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 13279474 - 13279576
Alignment:
Q  318 gagtaaattacac-ccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    ||||||||||||| ||||| ||| ||||| || ||| |||||||||||||||  ||||||||||||||| |||| ||| |||| ||||||||||||||||    
T  13279474 gagtaaattacactcccctcctc-taagagaagcttgaattacacttccctcctctcttatgttaaaatctaca-ttctcctcccttgaaaagtaaaatt 13279571  T
Q  417 tatac 421  Q
    |||||    
T  13279572 tatac 13279576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 3934022 - 3933956
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||  |||||||||||||||||||| ||||| || |||||||||||||||||||||    
T  3934022 aattacacttccctcccctcttatgttaaaatatacatttcccttc-cttgaaaagtaaaatttatac 3933956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 426
Target Start/End: Original strand, 27979262 - 27979333
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccctc 426  Q
    ||||||||| |||||  |||||||||||||||||||| |||||||| |||||||||||||||| |||| ||||    
T  27979262 aattacactcccctcccctcttatgttaaaatataca-ttcccctcccttgaaaagtaaaattaatactcctc 27979333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 14594117 - 14594166
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  14594117 ctcttatgttaaaatatacactt-ccctcccttgaaaagtaaaatttatac 14594166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 36762145 - 36762210
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||| |||||  ||||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  36762145 aattacactcccctcccctcttattttaaaatatacactt-ccctcccttgaaaagtaaaatttata 36762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 396
Target Start/End: Complemental strand, 5701174 - 5701095
Alignment:
Q  317 tgagtaaattacac-ccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||||||| ||||||| ||| ||||| ||||||||||||||  ||||  ||||||| ||||||||||||||||||    
T  5701174 tgagtaaattacactccccttc-cttgagaaatacttaaattacactatcctcccctcttatattaaaatatacacttccc 5701095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 15175951 - 15175849
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| || | ||||| |  ||| ||||||||| |||||   |||||||||||||||||||| | | ||||||||||||||||||| |    
T  15175951 gagtaaattacactcccctcccctaagagatgcttgaattacactcccctcccttcttatgttaaaatatacacat-ctctctcttgaaaagtaaaatct 15175853  T
Q  418 atac 421  Q
    ||||    
T  15175852 atac 15175849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 20184057 - 20183991
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||    
T  20184057 aattacactcccctcccctcttatgttacaatatacactt-ccctcccttgaaaactaaaatttatac 20183991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 22731103 - 22731037
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||   |||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  22731103 aattacactcccctcccttcttatgttaaaatatacac-tcccctcttttgaaaagtaaaattgatac 22731037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 12585656 - 12585705
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  12585656 ctcttatgttaaaatatacactt-tcctcccttgaaaagtaaaatttatac 12585705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 15175236 - 15175278
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  15175236 aattacacttccctcccctcttatgttaaaatatacacttccc 15175278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 20260030 - 20259981
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  20260030 ctcttatgttaaaatatacac-tcctctcccttgaaaagtaaaatttatac 20259981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 416
Target Start/End: Complemental strand, 36737492 - 36737431
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    ||||||||| |||||  ||||||||||||||||||||||| ||||| |||||||| |||||||    
T  36737492 aattacactcccctcccctcttatgttaaaatatacactt-ccctcccttgaaaaataaaatt 36737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 1406315 - 1406213
Alignment:
Q  318 gagtaaattacac-ccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    ||||||||||||| |||||||||| |||| || ||| |||||||||  | ||  ||||||||||||||||||||| || ||||  ||||||| |||||||    
T  1406315 gagtaaattacactccccttctct-aagagaagcttgaattacactctcatctcctcttatgttaaaatatacac-tctcctccattgaaaaataaaatt 1406218  T
Q  417 tatac 421  Q
    |||||    
T  1406217 tatac 1406213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 8572730 - 8572770
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttc 394  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  8572730 aattacactcccctcatctcttatgttaaaatatacacttc 8572770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 20570192 - 20570255
Alignment:
Q  357 tacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||| |||||  |||||||||||||||||||| |||||||| |||||||| ||||||| ||||    
T  20570192 tacactcccctcccctcttatgttaaaatataca-ttcccctcccttgaaaaataaaattaatac 20570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 141646 - 141596
Alignment:
Q  370 actcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| | ||||||  ||||||||||||||||||||    
T  141646 actcttatgttaaaatatacaat-cccctcctttgaaaagtaaaatttatac 141596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Complemental strand, 8573375 - 8573329
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||    
T  8573375 ctcttatgttaaaatatacac-tcccctcctttgaaaagtaaaattta 8573329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 31476389 - 31476455
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||| ||| |||||  |||||||||||||||||||| ||| |||| | |||||||||||||||||||    
T  31476389 aattagactcccctcccctcttatgttaaaatataca-ttctcctcccatgaaaagtaaaatttatac 31476455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 38955584 - 38955538
Alignment:
Q  374 ttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  38955584 ttatgttaaaatataca-ttcctctcccttgaaaagtaaaatttatac 38955538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 392
Target Start/End: Original strand, 1405528 - 1405606
Alignment:
Q  314 ttatgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||||  || |||||| | | |  ||| | ||||||| |||||| ||||||||||||||||||||||    
T  1405528 ttatgagtaaattacacttccatctctttaaagatgcttgagttacactcccctcacctcttatgttaaaatatacact 1405606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 6048016 - 6048054
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  6048016 aattacacttccctcccctcttatgttaaaatatacact 6048054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 9017678 - 9017720
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||||||| |||||  ||||||||||||||||||||||||||    
T  9017678 aattacactcccctcccctcttatgttaaaatatacacttccc 9017720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 13280190 - 13280148
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||||||| |||||  ||||||||||||||||||||||||||    
T  13280190 aattacactgccctcccctcttatgttaaaatatacacttccc 13280148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 13686016 - 13686065
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| || ||| ||||||||||||| ||||||||    
T  13686016 ctcttatgttaaaatatacac-tctcctttcttgaaaagtaagatttatac 13686065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 421
Target Start/End: Original strand, 40956779 - 40956852
Alignment:
Q  347 aaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||| ||||||||| |||| || |||||||||||||||||||| || | || |||| || |||||||||||||    
T  40956779 aaacttgaattacactcccctaaattcttatgttaaaatatacac-tctcatcacttgcaatgtaaaatttatac 40956852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 42599031 - 42598989
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||  |||| |||||||||||||||||||||||||||    
T  42599031 aattacactctcctccactcttatgttaaaatatacacttccc 42598989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 4876758 - 4876806
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||||||||||||||||||| ||| |||| |||||||| |||||||||||    
T  4876758 ctcttatgttaaaatataca-ttctcctcccttgaaaaataaaatttata 4876806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 19500815 - 19500863
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||| ||| ||| |||| ||||||||||||||||    
T  19500815 tcttatgttaaaatatacac-tcctctcccttgcaaagtaaaatttatac 19500863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 10687619 - 10687682
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    |||||||||  | ||| ||||||||||||| ||||||||| ||||| |||||||||||| |||||    
T  10687619 aattacactctcatcatctcttatgttaaattatacactt-ccctcccttgaaaagtaacattta 10687682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 396
Target Start/End: Original strand, 18523171 - 18523255
Alignment:
Q  312 aattatgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||| ||||||||||||||| || ||| |||||| |  |||||||  ||||  ||||  |||||||||||||||||||| |||||    
T  18523171 aattttgagtaaattacaccaccctcttttaagagatgcttaaatgtcactaacctcctctcttatgttaaaatatacatttccc 18523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 19409285 - 19409182
Alignment:
Q  318 gagtaaattacaccccctt-ctcttaagaaaaacttaaattacacttccctcaactc--ttatgttaaaatatacacttcccctctcttgaaaagtaaaa 414  Q
    ||||||||||||| ||||| |||| || |||| ||  ||||||||| |||||  |||  |||||||||||||||| |  |||||| ||||||||||||||    
T  19409285 gagtaaattacactcccttcctctcaa-aaaagctggaattacactcccctcccctcttttatgttaaaatatacgc--cccctcccttgaaaagtaaaa 19409189  T
Q  415 tttatac 421  Q
    |||||||    
T  19409188 tttatac 19409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 31477045 - 31476969
Alignment:
Q  317 tgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacactt 393  Q
    |||||||||||||| ||| |||| | | | |  ||| ||||||||| |||||  |||||||||||||||||||||||    
T  31477045 tgagtaaattacactcccctctcctcaaagatgcttgaattacactcccctcccctcttatgttaaaatatacactt 31476969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 36742627 - 36742587
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||| |||||  ||||||||||||||||||||||    
T  36742627 taaattacactcccctcccctcttatgttaaaatatacact 36742587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 421
Target Start/End: Original strand, 36853664 - 36853715
Alignment:
Q  369 aactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||| |||||||||||||||||| ||||||| |||||||| |||| |||||||    
T  36853664 aacttttatgttaaaatatacac-tcccctcccttgaaaattaaactttatac 36853715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 421
Target Start/End: Complemental strand, 12767693 - 12767584
Alignment:
Q  311 caattatgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagt 410  Q
    ||||| |||||||||||||| ||| |||| ||||| || ||| ||||||||| |||||  ||||||||||||||||||||||| ||||| |||||||| |    
T  12767693 caattttgagtaaattacactcccctctcctaagagaagcttgaattacactcccctcccctcttatgttaaaatatacactt-ccctcccttgaaaaat 12767595  T
Q  411 aaaatttatac 421  Q
    |||||||||||    
T  12767594 aaaatttatac 12767584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 21802648 - 21802582
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  21802648 aattacactctcctcccctcttatgttaaaatatacact-cccctcccttgaaaagtaaaatttatac 21802582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 2092381 - 2092315
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||| ||||||||||||||| || || |||||||||||||||||||||    
T  2092381 aattacactcccctcccctcttatattaaaatatacactt-ccatcccttgaaaagtaaaatttatac 2092315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 421
Target Start/End: Complemental strand, 6937940 - 6937882
Alignment:
Q  362 ttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||| |||||| |||||||||||||| ||| ||| |||||||||||||||||||||    
T  6937940 ttccctcacctcttaagttaaaatatacac-tccactcccttgaaaagtaaaatttatac 6937882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 10702978 - 10702912
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||| |||  ||||||||||||||||||||||| ||||| |||||||| | ||||||||||    
T  10702978 aattacacttctctcccctcttatgttaaaatatacactt-ccctcccttgaaaaattaaatttatac 10702912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 12409407 - 12409509
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| || | ||||| || ||| ||| ||||| |||||  ||| ||||||||||||||||| || ||||  ||||||||||||||||    
T  12409407 gagtaaattacactcccctcccctaagagaagcttgaatcacactcccctcccctcctatgttaaaatatacac-tctcctccattgaaaagtaaaattt 12409505  T
Q  418 atac 421  Q
    ||||    
T  12409506 atac 12409509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 14306839 - 14306885
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  14306839 ctcttatgttaaaatatacacttcccttc-cttgaaaagtaaaattta 14306885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 32114451 - 32114385
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||| |||  ||||||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  32114451 aattacacttctctctcctcttatgttaaaatatacac-tcctctcccttgaaaagtaaaatgtatac 32114385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 15499523 - 15499474
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  15499523 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaagatttatac 15499474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 31282272 - 31282223
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  31282272 ctcttatgttaaaatatacacc-cccctcccttgaaaagtaaaatttatac 31282223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 419
Target Start/End: Complemental strand, 14224534 - 14224470
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttat 419  Q
    |||||||||  |||| ||||||||||||||||||| | |||| ||| |||||||||||||||||||    
T  14224534 aattacactctcctctactcttatgttaaaatatata-ttcctctcccttgaaaagtaaaatttat 14224470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 30461473 - 30461537
Alignment:
Q  356 ttacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||  ||||||||||||||||||||||| | ||| |||||||||||| || |||||    
T  30461473 ttacacttccctcccctcttatgttaaaatatacactt-ctctcccttgaaaagtaatatgtatac 30461537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 21847426 - 21847347
Alignment:
Q  341 taagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||| ||| ||||| |||  ||||  ||||||||||||||||||||||| |||||  ||| ||||||||||||||||    
T  21847426 taagaaaagcttgaattagactctcctcccctcttatgttaaaatatacactt-ccctcctttgcaaagtaaaatttatac 21847347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 34793856 - 34793958
Alignment:
Q  318 gagtaaattacac-ccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    ||||||||||||| ||||||| ||||||| | | || ||| ||||| |||||  || ||||||||||||||||||||| | || |||||||||||||||     
T  34793856 gagtaaattacactccccttc-cttaagagatatttgaatcacactcccctctccttttatgttaaaatatacacttctcttc-cttgaaaagtaaaatc 34793953  T
Q  417 tatac 421  Q
    |||||    
T  34793954 tatac 34793958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 22269073 - 22269019
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccctc 426  Q
    |||||| ||||||||||||| ||||||||||| |||||||| ||||||||| ||||    
T  22269073 ctcttaggttaaaatataca-ttcccctctctggaaaagtacaatttatactcctc 22269019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 414
Target Start/End: Original strand, 22342145 - 22342187
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaa 414  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||    
T  22342145 ctcttatgttaaaatatacactt-ccctcccttgaaaagtaaaa 22342187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 4100541 - 4100583
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  4100541 cttaaattacactcccctcccctcttatgttaaaatatacact 4100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 4101151 - 4101102
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| || ||||  ||||||||||||||||||||    
T  4101151 ctcttatgttaaaatatacac-tctcctcctttgaaaagtaaaatttatac 4101102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 4126514 - 4126465
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| || ||||  ||||||||||||||||||||    
T  4126514 ctcttatgttaaaatatacac-tctcctcctttgaaaagtaaaatttatac 4126465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 10702301 - 10702339
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  10702301 aattacacttccctcccctcttatgttaaaatatacact 10702339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 22342236 - 22342277
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaa 414  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  22342236 tcttatgttaaaatatacactt-ccctcccttgaaaagtaaaa 22342277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 32113769 - 32113807
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32113769 aattacacttccctcccctcttatgttaaaatatacact 32113807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 34250735 - 34250682
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccct 425  Q
    |||||||| |||||||||||||| ||| | |||||||| ||||||||||||||||    
T  34250735 ctcttatgctaaaatatacactt-cccacccttgaaaattaaaatttatacccct 34250682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 28494936 - 28494895
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacac 391  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  28494936 cttaaattacacttcactcttctcttatgttaaaatatacac 28494895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 29807345 - 29807304
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacac 391  Q
    ||||||||||||||| |||  |||||||||||||||||||||    
T  29807345 cttaaattacacttcactcttctcttatgttaaaatatacac 29807304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 14313242 - 14313285
Alignment:
Q  374 ttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||    
T  14313242 ttatgttaaaatatacactt-ccctcccttgaaaaataaaattta 14313285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 33275782 - 33275849
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||| ||| |||||  |||||||||||||||||||| ||   ||| ||||||||||||||||||||    
T  33275782 taaattatactcccctcctctcttatgttaaaatataca-tttttctcccttgaaaagtaaaatttata 33275849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 8438647 - 8438545
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    |||||||||||||||||||||  ||||| |||||| ||||||||| | ||   ||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  8438647 gagtaaattacacccccttcttctaagagaaacttgaattacactccacttctctcttatgttaaaatatacac-tcccctctattgaaaaataaaattt 8438549  T
Q  418 atac 421  Q
    ||||    
T  8438548 atac 8438545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 17564701 - 17564767
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  17564701 aattacacttccctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaaaatttatac 17564767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 44284430 - 44284328
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| || | ||||| |  ||| ||||||||| |||||  |||||||||||||||||||||||  |||| |||||||| ||||||||    
T  44284430 gagtaaattacactcccctcccctaagagatgcttgaattacactcccctcccctcttatgttaaaatatacactt-tcctcccttgaaaaataaaattt 44284332  T
Q  418 atac 421  Q
    ||||    
T  44284331 atac 44284328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 3076010 - 3075945
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||| |||||  ||||||| |||||||||||||| ||||||||||||||| |||||||||||    
T  3076010 aattacactcccctctcctcttatattaaaatatacact-cccctctcttgaaaaataaaatttata 3075945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 36016803 - 36016738
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| | |||||  ||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  36016803 aattacaatcccctcctctcttatgttaaaatatacact--ccctcccttgaaaagtaaaatttatac 36016738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 12336332 - 12336278
Alignment:
Q  358 acacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaa 413  Q
    |||||||||||  ||||||||||||||||||||||| ||||| |||||||||||||    
T  12336332 acacttccctctcctcttatgttaaaatatacactt-ccctcccttgaaaagtaaa 12336278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 14094194 - 14094128
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||| ||||| ||||||| ||||||||| |||||||||||    
T  14094194 aattacactcccctcccctcttatgttaaaatttacac-tcccctcccttgaaaagaaaaatttatac 14094128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 30056284 - 30056386
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||| | ||| || ||||| | ||| || ||||||||| | || | |||||||||||||||||||||  | |||| |||||||||||||||||    
T  30056284 gagtaaattaccctcccctcccttaaaagaaatttgaattacactcctctaagctcttatgttaaaatatacac-actcctcccttgaaaagtaaaattt 30056382  T
Q  418 atac 421  Q
    ||||    
T  30056383 atac 30056386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 37836972 - 37837018
Alignment:
Q  374 ttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  37836972 ttatgttaaaatataca-ttcccctcccttgaaaagtaaaatttatac 37837018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 4855978 - 4855913
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||| | |||| ||||||||||||||||||||||| || || |||| |||||||||||||||    
T  4855978 aattacactcctctcatctcttatgttaaaatatacactttccttc-cttgtaaagtaaaatttata 4855913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 8443352 - 8443303
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||    
T  8443352 ctcttatgttaaaatatacactt-ccttcccttgaaaagtaaaatttatac 8443303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 31740176 - 31740127
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  31740176 ctcttatattaaaatatacact-cccctcccttgaaaagtaaaatttatac 31740127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 34925432 - 34925383
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  34925432 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaaaatgtatac 34925383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 40791096 - 40791145
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  40791096 ctcttatgttaaaatatacactaccc-tcccttgaaaagtaaaatttatac 40791145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 17734938 - 17734890
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  17734938 ctcttatgttaaaatataca-ttcacctcccttgaaaagtaaaatttata 17734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 40299613 - 40299565
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  40299613 tcttatgttaaaatatacactt-ccctcccttaaaaagtaaaatttatac 40299565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 11140090 - 11140165
Alignment:
Q  317 tgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||| ||||||||| ||| |||| ||| | | |||| ||||||||| |||||  ||||||||||||||||||||||    
T  11140090 tgagcaaattacactcccgtctcctaaaagatacttgaattacactcccctcccctcttatgttaaaatatacact 11140165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 11141105 - 11141039
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| | |||||  ||||||||||||||||||||| ||||||| | |||||| ||||||||||||    
T  11141105 aattacattcccctcctctcttatgttaaaatatacac-tcccctcccatgaaaaataaaatttatac 11141039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 13439478 - 13439524
Alignment:
Q  374 ttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  13439478 ttatgttaaaatatacact-cccctcccttgaaaattaaaatttatac 13439524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 14879553 - 14879619
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  |||||||||||||||||||| || || || |||||||||||||||||||||    
T  14879553 aattacactctcctcccctcttatgttaaaatataca-tttccgtcccttgaaaagtaaaatttatac 14879619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 395
Target Start/End: Original strand, 24809614 - 24809657
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcc 395  Q
    ||||||||||| |||||  |||||||||||||||||||||||||    
T  24809614 taaattacactcccctcccctcttatgttaaaatatacacttcc 24809657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 421
Target Start/End: Original strand, 34363963 - 34364009
Alignment:
Q  374 ttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||    
T  34363963 ttatgttaaaatatacatttccc-tcccttgaaaagtaaaatttatac 34364009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 37266186 - 37266120
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  37266186 aattacactctcctcccctcttatgttaaaatatacac-tccactcccttgaaaagtaagatttatac 37266120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 253573 - 253622
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  253573 ctcttatgttaaaatatacac-tcctctcccttgaaaagtaagatttatac 253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 662285 - 662236
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  662285 ctcttatgttaaaatatacac-tcctctcccttgaaaagtaagatttatac 662236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 848083 - 848034
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  848083 ctcttatgttaaaatatacac-tcctctcccttgaaaagtaagatttatac 848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 14880232 - 14880190
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||||||| |||||  ||||||||||||||||||||||||||    
T  14880232 aattacactcccctcccctcttatgttaaaatatacacttccc 14880190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 30353877 - 30353919
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||||| ||  ||||||||||||||||||||||||||    
T  30353877 aattacacttccttctcctcttatgttaaaatatacacttccc 30353919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 31846480 - 31846518
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  31846480 aattacacttccctcccctcttatgttaaaatatacact 31846518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 32904263 - 32904221
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||||||| |||||  ||||||||||||||||||||||||||    
T  32904263 aattacactcccctcccctcttatgttaaaatatacacttccc 32904221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 37872894 - 37872845
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||| |||||||  |||||||||||||| ||||||    
T  37872894 ctcttatgttaaaatataca-ttccccttccttgaaaagtaaaagttatac 37872845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 44746224 - 44746273
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||| ||||    
T  44746224 ctcttatgttaaaatataca-ttcccctcccttgaaaaataaaattaatac 44746273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 13422112 - 13422072
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||| |||||  ||||||||||||||||||||||    
T  13422112 taaattacactcccctcccctcttatgttaaaatatacact 13422072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 34678646 - 34678693
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||| |||||||||||||||| |||||| ||| ||||||||||||||||    
T  34678646 tcttgtgttaaaatatacact-cccctcccttaaaaagtaaaatttata 34678693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 33576739 - 33576669
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||| |||  ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  33576739 cttaaattacacttcactcctctcttatgttaaaatatacac-tcccctcttttgaaaagtaaaatttatac 33576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 8123303 - 8123251
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccc 424  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  8123303 ctcttatgttaaaatatacacttccc-tctcttgaaaattaaaatttatacccc 8123251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 40401595 - 40401529
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  40401595 aattacactcccctcccctcttatgttaaaatatacac-tcccttcccttgaaaagtaaaatttatac 40401529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 48872042 - 48872108
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| | |||||  |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  48872042 aattacattcccctcctctcttatgttaaaatatacact-cccctcccttgaaaagtaaaatttatac 48872108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 22711682 - 22711731
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  22711682 ctcttatgttaaaatatacact-ccactctcttgaaaagtaaaatttatac 22711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 12677128 - 12677195
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||||||||||  ||||  ||||||||||||||||||||| ||||||| | ||||||||||||||||||    
T  12677128 taaattacactctcctcccctcttatgttaaaatatacac-tcccctcccatgaaaagtaaaatttata 12677195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 38987783 - 38987846
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||| ||| |||||  ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  38987783 aattaaactcccctcccctcttatgttaaaatatacac-tccactctcttgaaaagtaaaattta 38987846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 2790111 - 2790177
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  |||||| ||||||||||||| |||||||| |||||||| ||||||||||||    
T  2790111 aattacactcccctcccctcttaagttaaaatataca-ttcccctcccttgaaaaataaaatttatac 2790177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 3391788 - 3391854
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| ||| |||  ||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  3391788 aattacatttcactcccctcttatgttaaaatatacac-tcccctcccttaaaaagtaaaatttatac 3391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 11639927 - 11639993
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| || ||||  ||||||||||||||||||||    
T  11639927 aattacactcccctcccctcttatgttaaaatatacac-tctcctcctttgaaaagtaaaatttatac 11639993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 417
Target Start/End: Complemental strand, 31221499 - 31221437
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||| |||||   |||||||||||||||||||| ||||||| |||||||||||||||||    
T  31221499 aattacactcccctcccttcttatgttaaaatatacac-tcccctcccttgaaaagtaaaattt 31221437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 36688903 - 36688837
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  |||||||||||||||||||||||  |||| |||||||||||||| ||||||    
T  36688903 aattacactcccctcccctcttatgttaaaatatacactt-tcctcccttgaaaagtaaaagttatac 36688837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 420
Target Start/End: Complemental strand, 1573801 - 1573732
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||||||| |||||  ||||||||||||||||||||| || |||| |||| |||||||| ||||||    
T  1573801 cttaaattacactcccctcccctcttatgttaaaatatacac-tcacctcccttgcaaagtaaactttata 1573732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 5227900 - 5227949
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  5227900 ctcttatgttaaaatataca-ttcccctcccttaaaaagtaaaatttatac 5227949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 16426036 - 16425987
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  16426036 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaatatttatac 16425987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 20261035 - 20261077
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  20261035 aattacacttccctcccctcttatgttaaaatatacacttccc 20261077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 32387528 - 32387577
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||||    
T  32387528 ctcttatgttaaaatatacactt-ccatcccttgaaaagtaaaatttatac 32387577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 12679042 - 12679090
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  12679042 ctcttatgttaaaatataca-ttcccctcccatgaaaagtaaaatttata 12679090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 36687291 - 36687370
Alignment:
Q  317 tgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccc 397  Q
    |||||||||||||| ||| || ||||| | |  ||| |||||||||||||||  |||||||||||||||||||||| ||||    
T  36687291 tgagtaaattacactcccctcccttaa-agatgcttgaattacacttccctcccctcttatgttaaaatatacactccccc 36687370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 43450130 - 43450166
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatataca 390  Q
    |||||||||||||||| ||||||||||||||||||||    
T  43450130 aattacacttccctcatctcttatgttaaaatataca 43450166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 13068454 - 13068385
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||   |||||||||||||||||||| ||||||| ||| |||| ||| ||||||||    
T  13068454 cttaaattacacttccctcctttcttatgttaaaatatacac-tcccctcccttcaaaa-taagatttatac 13068385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 23232911 - 23232961
Alignment:
Q  370 actcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||| |||||||||||||| |||||||  |||||||||||||||||||||    
T  23232911 actcttgtgttaaaatataca-ttccccttccttgaaaagtaaaatttatac 23232961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 29615547 - 29615613
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  |||||||||||||||||||| |||||||| ||| |||||||||||| ||||    
T  29615547 aattacactctcctcccctcttatgttaaaatataca-ttcccctcccttaaaaagtaaaattaatac 29615613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 46011163 - 46011097
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| ||||   ||||||||||||||||| |||| |||||| ||||||||| |||||||||||    
T  46011163 aattacactccccttctctcttatgttaaaatatgcact-cccctcccttgaaaaggaaaatttatac 46011097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Original strand, 8122658 - 8122700
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||||||| |||| | ||||||||||||||||||||||||||    
T  8122658 aattacactccccttatctcttatgttaaaatatacacttccc 8122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 20261608 - 20261567
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaa 413  Q
    ||||||||||||||||||||| ||||||| |||||||||||||    
T  20261608 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaaa 20261567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 27144208 - 27144250
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  27144208 cttaaattacactcccctcccctcttatgttaaaatatacact 27144250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 28308697 - 28308648
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||| |||||    
T  28308697 ctcttatgttaaaatatacac-tcccctcccttgaaaattaaaatgtatac 28308648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 35783393 - 35783431
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  35783393 aattacacttccctctcctcttatgttaaaatatacact 35783431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 36848524 - 36848475
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||||  |||| ||| |||||||||||||||||    
T  36848524 ctcttatgttaaaatatacactt-tcctccctttaaaagtaaaatttatac 36848475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Complemental strand, 48982582 - 48982544
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  48982582 aattacacttccctcccctcttatgttaaaatatacact 48982544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 10410150 - 10410198
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| | | | ||||||||||||||||||||||    
T  10410150 tcttatgttaaaatatacact-ctcatttcttgaaaagtaaaatttatac 10410198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 26200503 - 26200459
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||    
T  26200503 tcttatgttataatataca-ttcccctcccttgaaaagtaaaattt 26200459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 418
Target Start/End: Complemental strand, 10412699 - 10412636
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||| ||| |||  |||||||||||||||||||| |||| ||| ||| ||||||||||||||    
T  10412699 aattacaattctctcccctcttatgttaaaatataca-ttcctctcccttaaaaagtaaaattta 10412636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 11397584 - 11397686
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    |||||||||||||  ||||| | ||||| || ||| |||||||||||||||  ||||||||||||||||||||| || | || |||||||||||||||||    
T  11397584 gagtaaattacacttccttcccctaagagaagcttgaattacacttccctcccctcttatgttaaaatatacac-tctcatcccttgaaaagtaaaattt 11397682  T
Q  418 atac 421  Q
    ||||    
T  11397683 atac 11397686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 424
Target Start/End: Original strand, 13623208 - 13623277
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccc 424  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  13623208 aattacacttccctcccctcttatgttaaaatatacactt-ccctcccttgaaaattaaaatttatacccc 13623277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 426
Target Start/End: Original strand, 1262430 - 1262501
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccctc 426  Q
    ||||||||| |||||  ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  1262430 aattacactcccctcccctcttatgttaaaatatacac-tctcctctcttgaaaagtaaaatttatactcctc 1262501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 416
Target Start/End: Complemental strand, 44500086 - 44500025
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    ||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  44500086 aattacactcccctcccctcttatgttaaaatatacactt-ccctctcttgaaaagtaaaatt 44500025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 30605389 - 30605329
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaat 415  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  30605389 aattacactcccctccactcttatgttaaaatatacactt-ccctctcttgaatagtaaaat 30605329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 28247539 - 28247605
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||  |||||||||||||||||||||||  ||||||| || |||||||||||||||    
T  28247539 aattacacttccctctcctcttatgttaaaatatacactt-tcctctctcgagaagtaaaatttatac 28247605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 49765172 - 49765106
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  |||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  49765172 aattacactcccctcccctcttatgttaaaatataca-ttcccctcccttgaaaggtaaaatttatac 49765106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 54403592 - 54403658
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  54403592 aattacactcccctcccctcttatgttaaaatatacactt-ccctcccttgaaaagtaaaagttatac 54403658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 3090461 - 3090392
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccc 424  Q
    |||| |||| |||||  |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  3090461 aattgcactcccctcccctcttatgttaaaatatacact-cccctcccttgaaaaggaaaatttatacccc 3090392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 17765007 - 17764939
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| ||| |||||  ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  17765007 taaattaaactcccctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaagatttatac 17764939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 19066327 - 19066259
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| ||| |||||  ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  19066327 taaattaaactcccctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaagatttatac 19066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 18364663 - 18364729
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  18364663 aattacactcccctcccctcttatgttaaaatatacac-tcccctcccttgaaaaataaaattaatac 18364729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 40036439 - 40036373
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||| | |||||  ||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  40036439 aattacattcccctcccctcttatgttaaaatatacac-tcccctcccttgcaaagtaaaatttatac 40036373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 40974741 - 40974675
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||| ||  ||||||||||||||||||||| ||||||| |||| || |||||||||||||    
T  40974741 aattacacttccgtcccctcttatgttaaaatatacac-tcccctcacttgcaatgtaaaatttatac 40974675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 3541110 - 3541061
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  3541110 ctcttatgttaaaatataca-ttcccctcccatgaaaagtaaaatttatac 3541061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 9830271 - 9830376
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    |||||||||| || |||||| | ||| | || ||| |||||||||| | ||  |||||| |||||||||||||| ||||||| |||||||| ||||| ||    
T  9830271 gagtaaattatactcccttcccctaaaagaagcttgaattacactttcatcccctcttaagttaaaatatacac-tcccctcccttgaaaaataaaagtt 9830369  T
Q  418 atacccc 424  Q
    |||||||    
T  9830370 atacccc 9830376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 27394301 - 27394350
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  27394301 ctcttatgttaaaatataca-ttcccctcccttaaaaagtaaaatttatac 27394350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 40928211 - 40928165
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||    
T  40928211 cttaaattacatttccctcccctcttatgttaaaatatacacttccc 40928165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 53490757 - 53490708
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  53490757 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaagatttatac 53490708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 54605795 - 54605860
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||||||  |||||||||||    
T  54605795 aattacactcccctcccctcttatgttaaaatatacac-tcccctcccttgaaagttaaaatttata 54605860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 44950342 - 44950405
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||| |||||||  |||||||||| |||||||||| ||||||| ||| ||||||||||||||    
T  44950342 aattacaattccctcctctcttatgttgaaatatacac-tcccctccctttaaaagtaaaattta 44950405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 47794695 - 47794630
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  |||||||||||||||||||| | |||||| |||||||||  ||||||||||    
T  47794695 aattacactcccctctcctcttatgttaaaatatacattccccctcccttgaaaag--aaatttatac 47794630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 49764523 - 49764563
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttc 394  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  49764523 aattacacttccctcccctcttatgttaaaatatacacttc 49764563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 291159 - 291205
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  291159 ctcttatgttaaaatatacac-tcccctcccttgaaaagaaaaattta 291205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 3089778 - 3089821
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||| |||||||||||||||  ||||||||||||||||||||||    
T  3089778 acttgaattacacttccctcccctcttatgttaaaatatacact 3089821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 11345402 - 11345336
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||| |||| |||| ||||||    
T  11345402 aattacactcccctcccctcttatgttaaaatatacac-tcccctcccttgtaaaggaaaacttatac 11345336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 22518636 - 22518581
Alignment:
Q  341 taagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||| || ||| ||||||||||| |||  ||||||||||||||||||||||||||    
T  22518636 taagagaatcttgaattacacttctctcccctcttatgttaaaatatacacttccc 22518581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 33115277 - 33115238
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacactt 393  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  33115277 aattacacttccctcccctcttatgttaaaatatacactt 33115238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 48223557 - 48223659
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| || | ||||| |  ||| |||||||||| ||||   |||||||||||||||||||||| | ||| || |||||||||||| |    
T  48223557 gagtaaattacactcccctcgcctaagagatgcttgaattacactttcctcccttcttatgttaaaatatacactt-ctctccctcgaaaagtaaaatct 48223655  T
Q  418 atac 421  Q
    ||||    
T  48223656 atac 48223659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 10688838 - 10688887
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  10688838 ctcttatgttaaaatatacatttcccttc-cttcaaaagtaaaatttatac 10688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 23682041 - 23682090
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  23682041 ctcttatgttaaaatatacac-tcccctcccttgaaaaataaaattaatac 23682090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 24054278 - 24054327
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  24054278 ctcttatgttaaaatatacac-tcccctcccttgaaaaataaaattaatac 24054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 32255768 - 32255726
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||||||||  |||||||||||||||||| |||||||    
T  32255768 aattacacttccctctcctcttatgttaaaatatatacttccc 32255726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 40927526 - 40927564
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  40927526 aattacacttccctcccctcttatgttaaaatatacact 40927564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 25480578 - 25480626
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||||  |||| |||| ||||||||||||||||    
T  25480578 tcttatgttaaaatatacactt-tcctcccttgtaaagtaaaatttatac 25480626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 49079992 - 49080056
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  |||||||||||||||||||   ||||||| |||||||||||| ||||||||    
T  49079992 aattacactctcctcccctcttatgttaaaatatac---tcccctcccttgaaaagtaagatttatac 49080056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 41587359 - 41587300
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaag 409  Q
    |||| ||||||||| | |||  ||||||||||||||||||||| ||||||| |||||||||    
T  41587359 acttgaattacactcctctcccctcttatgttaaaatatacac-tcccctcccttgaaaag 41587300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 10753295 - 10753220
Alignment:
Q  162 agaagtgctatatatccagagagattttaccacgaagtgcttgcgaaatagcgtttaaccaataaaaattgctaac 237  Q
    |||||||||||||||| ||||||||||| ||||||||||||  |||||||| ||||| ||||||||||| ||||||    
T  10753295 agaagtgctatatatctagagagattttgccacgaagtgctcccgaaatagtgtttatccaataaaaatcgctaac 10753220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 421
Target Start/End: Original strand, 27225669 - 27225772
Alignment:
Q  317 tgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    |||||||||||||  ||| || | ||||| |  ||| |||||||||  ||||  ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  27225669 tgagtaaattacaatcccctcccctaagagatgcttgaattacactctcctcccctcttatgttaaaatatacactt-ccctcccttgaaaagtaaaatt 27225767  T
Q  417 tatac 421  Q
    |||||    
T  27225768 tatac 27225772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 33126897 - 33126831
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||| |||| | ||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  33126897 aattacacttacctccattcttatgttaaaatatacactt-tcctcccttgaaaagtaaaatttatac 33126831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 42831282 - 42831182
Alignment:
Q  317 tgagtaaattacac-ccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaat 415  Q
    |||||||||||||| ||||| | ||||| | | |||| ||||||||| |||||  ||||||||||||||||||||| |||||||  ||||||||||||||    
T  42831282 tgagtaaattacactcccctccccttaa-agatacttgaattacactcccctccgctcttatgttaaaatatacac-tcccctcctttgaaaagtaaaat 42831185  T
Q  416 tta 418  Q
    |||    
T  42831184 tta 42831182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 4865281 - 4865225
Alignment:
Q  182 gagattttaccacgaagtgcttgcgaaatagcgtttaaccaataaaaattgctaacg 238  Q
    |||||||| ||||||||||||  |||||||| ||||||||||||||||| |||||||    
T  4865281 gagattttgccacgaagtgctcccgaaatagtgtttaaccaataaaaatcgctaacg 4865225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 10012508 - 10012429
Alignment:
Q  341 taagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||| || ||| |||||| ||||| ||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  10012508 taagagaagcttgaattacccttccatcccctcttatgttaaaatatacactt-ccctcccttgaacagtaaaatttatac 10012429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 16536402 - 16536460
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaa 413  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||||||||||||    
T  16536402 aattacactcccctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaaa 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 17109352 - 17109406
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccctc 426  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| |||| ||||    
T  17109352 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaaaattgatactcctc 17109406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 420
Target Start/End: Original strand, 25990454 - 25990524
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||| |||  |||||||| |||||||||||    
T  25990454 acttgaattacacttccctcccctcttatgttaaaatataca-ttctccttccttgaaaaataaaatttata 25990524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 45737335 - 45737401
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| || |||| |||||||| ||||||||||||    
T  45737335 aattacactcccctcccctcttatgttaaaatatacac-tctcctcccttgaaaaataaaatttatac 45737401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 45738030 - 45738096
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  ||||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  45738030 aattacactctcctcccctcttatgttaaaatatacactt-ccctcccttaaaaagtaaaatttatac 45738096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 36604774 - 36604823
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  36604774 ctcttatgttaaaatatacactt-ccctcctttgaaaagtaaaatttatac 36604823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 43320621 - 43320556
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||| |||||  || ||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  43320621 aattacactcccctccccttttatgttaaaatatagactt-ccctcccttgaaaagtaaaatttata 43320556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 426
Target Start/End: Original strand, 4007579 - 4007654
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttcccctctc--ttgaaaagtaaaatttatacccctc 426  Q
    |||||||||||||  ||||  ||||||||||||||||||||   ||||||||  |||||||||||||||||||| ||||    
T  4007579 cttaaattacactctcctcccctcttatgttaaaatataca---cccctctcctttgaaaagtaaaatttatactcctc 4007654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 426
Target Start/End: Original strand, 47233085 - 47233161
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccctc 426  Q
    |||| ||||||||| |||||   ||||||||||||||||||| |||||||  ||||||||| ||||||||||| ||||    
T  47233085 acttgaattacactcccctcccttcttatgttaaaatataca-ttccccttccttgaaaagcaaaatttatactcctc 47233161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 18406560 - 18406623
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||||| |||||  ||||||||||||||||||||| | ||||| |||||||| |||||||||    
T  18406560 aattacactcccctcctctcttatgttaaaatatacac-taccctcccttgaaaaataaaattta 18406623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 19071742 - 19071807
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  ||||||||||||||||||||||  ||||| | |||||||||||||||||||    
T  19071742 aattacactctcctcccctcttatgttaaaatatacact--ccctcccgtgaaaagtaaaatttatac 19071807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 19119632 - 19119697
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  ||||||||||||||||||||||  ||||| | |||||||||||||||||||    
T  19119632 aattacactctcctcccctcttatgttaaaatatacact--ccctcccgtgaaaagtaaaatttatac 19119697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 420
Target Start/End: Complemental strand, 41575888 - 41575821
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||||||||||  ||||  ||||||||||||||||||||||| ||||| ||| ||||| ||||||||||    
T  41575888 taaattacactctcctcccctcttatgttaaaatatacactt-ccctcccttaaaaagaaaaatttata 41575821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 426
Target Start/End: Complemental strand, 45559808 - 45559737
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccctc 426  Q
    ||||||||| || ||  |||||||||||||||||||| | ||| || ||||||||||||||||||||| ||||    
T  45559808 aattacactcccatctcctcttatgttaaaatatacaatccccttc-cttgaaaagtaaaatttatactcctc 45559737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 47216896 - 47216852
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||||||||||  |||||||||||||||||||| |||||    
T  47216896 taaattacacttccctcccctcttatgttaaaatatacaattccc 47216852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 16537064 - 16537025
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacactt 393  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  16537064 aattacacttccctcccctcttatgttaaaatatacactt 16537025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Complemental strand, 28198171 - 28198101
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| ||| |||||  |||||||||| |||||||||| || |||| |||||||| ||||||||||||    
T  28198171 cttaaattatactcccctcccctcttatgtttaaatatacac-tctcctcccttgaaaaataaaatttatac 28198101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 47216087 - 47216153
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||   ||||||||||||||||||||||  || ||| ||| ||||||||||||||||    
T  47216087 aattacacttccctatcctcttatgttaaaatatacactcgccttct-ttgtaaagtaaaatttatac 47216153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 4667569 - 4667520
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  4667569 ctcttatgttaaaatatacac-tcttctcccttgaaaagtaaaatttatac 4667520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Complemental strand, 23739860 - 23739822
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  23739860 aattacacttccctcccctcttatgttaaaatatacact 23739822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 398
Target Start/End: Original strand, 29344549 - 29344595
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccct 398  Q
    |||||||||||  ||||  ||||||||||||||||||||||||||||    
T  29344549 taaattacactctcctcccctcttatgttaaaatatacacttcccct 29344595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 50143415 - 50143468
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaa 408  Q
    ||||||||| |||||  |||||||||||||||||||| |||||||| ||||||||    
T  50143415 aattacactcccctcccctcttatgttaaaatataca-ttcccctcccttgaaaa 50143468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 16248566 - 16248513
Alignment:
Q  339 cttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||| |||||||||||| | |||| || |||||||||||||| ||||    
T  16248566 cttaagaaaaatttaaattacactcctctcaccttttatgttaaaatattcact 16248513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 31765381 - 31765429
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||||||||| ||||||||||| |||||| |||||||| |||||||||||    
T  31765381 ctcttatgttcaaatatacact-cccctcccttgaaaaataaaatttata 31765429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 15356964 - 15357000
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatataca 390  Q
    |||||||||||||||  ||||||||||||||||||||    
T  15356964 aattacacttccctcccctcttatgttaaaatataca 15357000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 421
Target Start/End: Original strand, 18571943 - 18572022
Alignment:
Q  341 taagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||| || ||| ||||||||||||||   ||||||| |||||||| |||| ||| || | ||||||||||||||||||||    
T  18571943 taagagaagcttgaattacacttcccttctctcttatattaaaatacacac-tccactattttgaaaagtaaaatttatac 18572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 28970882 - 28970929
Alignment:
Q  375 tatgttaaaatatacacttcccctctcttgaaaagtaaaatttataccc 423  Q
    |||||||||||||||||| | |||| ||||||||||||||| |||||||    
T  28970882 tatgttaaaatatacact-ctcctcccttgaaaagtaaaatgtataccc 28970929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 402
Target Start/End: Original strand, 46682705 - 46682753
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctct 402  Q
    ||||||||||| |||  |||||||||||||||||||||| ||| |||||    
T  46682705 aattacacttcgctctcctcttatgttaaaatatacactccccttctct 46682753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 37199643 - 37199577
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  37199643 aattacactcccctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaaaatttatac 37199577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 40769413 - 40769347
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||| ||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  40769413 aattacactcccctcacctcttatgttaaaatatacac-tctcctcccttgaaaagtaaaatttatac 40769347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 3045625 - 3045576
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3045625 ctcttatgttaaaatatacacttccc-tctcttgaaaagtaaaatttatac 3045576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 420
Target Start/End: Complemental strand, 34173757 - 34173692
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||| |||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  34173757 aattacactcccctcccctcttatgttaaaatataca-ttcccctcccttgaaaagtaaaatttata 34173692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 37009707 - 37009640
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||||||||| | |||  ||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  37009707 cttaaattacactcctctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaaaattta 37009640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 1366456 - 1366390
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1366456 aattacactctcctcctctcttatgttaaaatatacatttccc-tctcttgaaaagtaaaatttatac 1366390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 425
Target Start/End: Complemental strand, 3515516 - 3515446
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccct 425  Q
    ||||||||  |||||  |||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  3515516 aattacacccccctcccctcttatgttaaaatatacact-cccctcctttgaaaagtaaaatttatacccct 3515446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 354 - 424
Target Start/End: Original strand, 33146065 - 33146134
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccc 424  Q
    |||| |||| |||||  |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  33146065 aattgcactcccctcccctcttatgttaaaatatacact-cccctcccttgaaaaggaaaatttatacccc 33146134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 31709114 - 31709162
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  31709114 ctcttatgttaaaatatacacttcccttc-cttgaaaagtaaaatttata 31709162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 421
Target Start/End: Original strand, 37329732 - 37329796
Alignment:
Q  356 ttacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||   ||||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  37329732 ttacacttccctttcctcttatgttaaaatatacac-tcccctcccttgaaaaataaaatttatac 37329796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 43439844 - 43439776
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||| |||||  ||||||||||||||||||||| || |||| |||||||| ||||||||||||    
T  43439844 taaattacactaccctctcctcttatgttaaaatatacac-tctcctcccttgaaaaataaaatttatac 43439776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 6229928 - 6229862
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| ||||   ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  6229928 aattacactccccttccctcttatgttaaaatatacac-tcccctcccttgaaaagtaagatttatac 6229862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 418
Target Start/End: Complemental strand, 33476583 - 33476537
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  33476583 ctcttatgttaaaatatacgct-cccctctcttgaaaagtaaaattta 33476537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 7939374 - 7939423
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  7939374 ctcttatgttaaaatatacactt-acctcccttgaaaagtaaaatttatac 7939423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 15890667 - 15890743
Alignment:
Q  316 atgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||||||| | | || | ||||| || ||| |||||||||||||||  || |||||||||||||||||||    
T  15890667 atgagtaaattacactctcctcccctaagagaatctttaattacacttccctccccttttatgttaaaatatacact 15890743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 31597255 - 31597318
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    |||||||||  ||||  |||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  31597255 aattacactcacctcccctcttatgttaaaatataaact-cccctcccttgaaaagtaaaattta 31597318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 1534197 - 1534263
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  ||||||| |||||||||||| |||||||  |||||||||||||||||||||    
T  1534197 aattacactcacctcctctcttatattaaaatataca-ttccccttacttgaaaagtaaaatttatac 1534263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 4438022 - 4437956
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| | |||  ||||||||||||||||||||| ||||||  |||| ||||||||||||||||    
T  4438022 aattacactcctctcccctcttatgttaaaatatacac-tccccttccttgtaaagtaaaatttatac 4437956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 11796853 - 11796788
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  |||||| ||||||||||||| || ||||| |||||||||||||||||||||    
T  11796853 aattacactcccctcccctcttaagttaaaatataca-tttccctc-cttgaaaagtaaaatttatac 11796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 415
Target Start/End: Original strand, 17449769 - 17449811
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaat 415  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  17449769 tcttatgttaaaatatacac-tcccctctcttcaaaagtaaaat 17449811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 22298330 - 22298228
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||  |||  ||||| || ||| ||||||||| | |||  ||||||||||||||||||||| ||  ||| |||||||| ||||||||    
T  22298330 gagtaaattacactcctctcttctaagagaagcttgaattacactcctctcccctcttatgttaaaatatacac-tcttctcccttgaaaaataaaattt 22298232  T
Q  418 atac 421  Q
    ||||    
T  22298231 atac 22298228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 390
Target Start/End: Complemental strand, 35954077 - 35954002
Alignment:
Q  315 tatgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatataca 390  Q
    |||||||||||||||| ||| || ||||| | |   || |||||||||||||||  ||||||||||||||||||||    
T  35954077 tatgagtaaattacactcccctcccttaaaagatgtttgaattacacttccctcccctcttatgttaaaatataca 35954002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 11564495 - 11564446
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| || |||| |||||||||||||| ||||||    
T  11564495 ctcttatgttaaaatatacac-tctcctcccttgaaaagtaaaacttatac 11564446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 13873346 - 13873384
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  13873346 aattacaattccctcacctcttatgttaaaatatacact 13873384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Original strand, 14013471 - 14013509
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  14013471 aattacaattccctcacctcttatgttaaaatatacact 14013509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 8727390 - 8727342
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||| |||||||| | ||||| ||||||||||||||||||||||||    
T  8727390 tcttatgtaaaaatatataattccc-tctcttgaaaagtaaaatttatac 8727342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 32023022 - 32023066
Alignment:
Q  376 atgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||    
T  32023022 atgttaaaatatacactt-ccctcccttgcaaagtaaaatttatac 32023066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 5790040 - 5790104
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  |||||||||||||||||||| |||| | | |||||||| ||||||||||||    
T  5790040 aattacactcccctc--ctcttatgttaaaatataca-ttcctcacccttgaaaaataaaatttatac 5790104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Complemental strand, 16111210 - 16111170
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttc 394  Q
    ||||||||| ||||| ||||||| |||||||||||||||||    
T  16111210 aattacactcccctccactcttaagttaaaatatacacttc 16111170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Complemental strand, 18997235 - 18997195
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttc 394  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  18997235 aattacacttccctcatattttatgttaaaatatacacttc 18997195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 26196232 - 26196303
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||  | ||  ||||||||||||||||||||| |||| ||  ||||||| ||||||||||||    
T  26196232 acttaaattacactctcatcctctcttatgttaaaatatacac-tcccatccattgaaaaataaaatttatac 26196303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 421
Target Start/End: Original strand, 36143280 - 36143351
Alignment:
Q  347 aaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||| |||||||||  |||| ||||||| ||||||||||||||||   | |||||||||| ||| ||||||||    
T  36143280 aaacttgaattacactctcctccactcttacgttaaaatatacactt---cactcttgaaaactaacatttatac 36143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 37009025 - 37009065
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttc 394  Q
    ||||||||| |||||  ||||||||||||||||||||||||    
T  37009025 aattacactcccctcccctcttatgttaaaatatacacttc 37009065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 38910705 - 38910745
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttc 394  Q
    ||||||||| |||||  ||||||||||||||||||||||||    
T  38910705 aattacactcccctcctctcttatgttaaaatatacacttc 38910745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 11673 - 11604
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccc 424  Q
    |||||||||  ||||  ||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  11673 aattacactcacctcccctcttatgttaaattatacact-cccctctcttgaaaagtaaaatttatacccc 11604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 416
Target Start/End: Complemental strand, 35667425 - 35667364
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  35667425 aattacacttccctcccctcttatgttaaaatatacactt-ccctcccttgaaaagtaaaatt 35667364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 421
Target Start/End: Original strand, 21037315 - 21037395
Alignment:
Q  340 ttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||| || ||| ||||||||| |||||  |||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  21037315 ttaagagaagcttgaattacactcccctcctctcttatgttaaaatatacactt-tcctcccttgaaaagtaaaatttatac 21037395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 6711263 - 6711329
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||  ||||| ||||||||||||||| | ||||| |||||||||||||||||||||    
T  6711263 aattacacttccctcccctcttgtgttaaaatatacacct-ccctcccttgaaaagtaaaatttatac 6711329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 8138317 - 8138419
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| || | ||||| || ||| ||||||||  ||||   ||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  8138317 gagtaaattacactcccctcccctaagagaagcttgaattacacacccctttcctcttatgttaaaatatacactt-ccctcccttgaaaaataaaattt 8138415  T
Q  418 atac 421  Q
    ||||    
T  8138416 atac 8138419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 51019682 - 51019748
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  51019682 aattacactctcctcccctcttatgttaaaatatacactt-ccctcccttgaaaagtaaaatttatac 51019748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 55068874 - 55068940
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  55068874 aattacactcccctcccctcttatgttaaaatatacac-tcccctcccttgtaaagtaaaatttatac 55068940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 7479373 - 7479324
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  7479373 ctcttatgttaaaatatacactt-ccctcccttgaaaagtaaaatttatac 7479324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 421
Target Start/End: Complemental strand, 36898182 - 36898077
Alignment:
Q  315 tatgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaa 414  Q
    |||||||||||||||| ||| || | | | | | |||| ||||||||| |||||  || |||||||||||||||||| ||||||| ||||||||| ||||    
T  36898182 tatgagtaaattacactcccctcccctcaaagatacttgaattacactcccctctccttttatgttaaaatatacac-tcccctcccttgaaaagaaaaa 36898084  T
Q  415 tttatac 421  Q
    |||||||    
T  36898083 tttatac 36898077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 35853584 - 35853647
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaa 413  Q
    |||| |||||||||||||||  ||||||||||||||||||||| | ||||| |||||||||||||    
T  35853584 acttgaattacacttccctcccctcttatgttaaaatatacacct-ccctcccttgaaaagtaaa 35853647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Complemental strand, 16192359 - 16192293
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| |||| || |||||||||||||    
T  16192359 aattacactcccctcctctcttatgttaaaatatacac-tcccctcacttgcaatgtaaaatttatac 16192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 25010137 - 25010035
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||||||| || ||| | | |  ||| |||||||||  ||||  ||||||||||||||||||||| |||  || |||||||||||||||||    
T  25010137 gagtaaattacacccccctcccttcaaagatgcttgaattacactctcctcccctcttatgttaaaatatacac-tccattcccttgaaaagtaaaattt 25010039  T
Q  418 atac 421  Q
    ||||    
T  25010038 atac 25010035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 35665983 - 35666049
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||| ||||| |||  |||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  35665983 aattatacttctctcctctcttatgttaaaatatacactt-acctcccttgaaaagtaaaatttatac 35666049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 53102820 - 53102718
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| || ||||||| |  ||| ||||||||| |||||   ||||||||||||||||| |||| ||||| ||| ||||||||||| |    
T  53102820 gagtaaattacactcccctcccttaagatatgcttgaattacactcccctcccatcttatgttaaaatatatactt-ccctcccttaaaaagtaaaatct 53102722  T
Q  418 atac 421  Q
    ||||    
T  53102721 atac 53102718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 7480005 - 7479958
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  7480005 tcttatgttaaaatatacactt--cctcccttgaaaagtaaaatttatac 7479958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 7797639 - 7797594
Alignment:
Q  372 tcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  7797639 tcttatgttaaaatatacactt-ccctcccttgaaaagtaaaattta 7797594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 16960200 - 16960274
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||||| ||| |||||| | | |  ||| |||||||||||||||  ||||||||||||||||||||||    
T  16960200 gagtaaattacactcccctctcttcaaagatgcttgaattacacttccctcccctcttatgttaaaatatacact 16960274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 420
Target Start/End: Original strand, 44664737 - 44664802
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||||| |||  |||||||||||||||||||| ||| |||| |||||||| |||||||||||    
T  44664737 aattacacttctctcccctcttatgttaaaatataca-ttctcctcccttgaaaaataaaatttata 44664802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 28464232 - 28464273
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcc 395  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  28464232 aattacacttccctcccctcttatgttaaaatatacacttcc 28464273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 45847794 - 45847746
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttata 420  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||    
T  45847794 ctcttatgttaaaatatacac-tcccctctcgtgtaaagtaaaatttata 45847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 418
Target Start/End: Complemental strand, 23722095 - 23722032
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    ||||||||| |||||  ||||||||||||||||||||| | ||||| |||||||| |||||||||    
T  23722095 aattacactcccctcccctcttatgttaaaatatacac-taccctcccttgaaaaataaaattta 23722032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 32448989 - 32448918
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||| ||||||||| | |||  ||||||||||||||||||||||| |||||  ||||||||||||| ||||||    
T  32448989 acttgaattacactccactcccctcttatgttaaaatatacactt-ccctcctttgaaaagtaaaagttatac 32448918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 36651224 - 36651172
Alignment:
Q  341 taagaaaaacttaaattacacttccctcaactcttatgttaaaatatacactt 393  Q
    ||||| |||||| ||||||| ||||||| |||||||||||||||| |||||||    
T  36651224 taagagaaacttgaattacatttccctccactcttatgttaaaatctacactt 36651172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 13482214 - 13482272
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaa 413  Q
    |||||||||  ||||  ||||||||||||||||||||| ||||||| |||||||||||||    
T  13482214 aattacactctcctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaaa 13482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 26705029 - 26705131
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| |||| | | | | |||| ||||||| |||||||  |||||||||||||||||||||  ||||||  ||||||| |||||||     
T  26705029 gagtaaattacactcccctctcctcaaagatacttgaattacatttccctcccctcttatgttaaaatatacac-acccctccattgaaaaataaaatta 26705127  T
Q  418 atac 421  Q
    ||||    
T  26705128 atac 26705131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 53305701 - 53305744
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||    
T  53305701 acttaaattacacttccatctcctcttatgttaaaatatacact 53305744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 56309445 - 56309511
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||| | ||  |||||||||||||||| ||||| || |||||||||||| ||||||||||||    
T  56309445 aattacactttcatcccctcttatgttaaaatacacact-cctctctcttgaaaaataaaatttatac 56309511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 17201988 - 17201946
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  17201988 aattacacttctctccactcttatgttaaaatctacacttccc 17201946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 26705749 - 26705675
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||||| |||||| ||| | | |  ||| ||||||||| |||||  ||||||||||||||||||||||    
T  26705749 gagtaaattacactcccttcccttcaaagatgcttgaattacactcccctcctctcttatgttaaaatatacact 26705675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 32963204 - 32963155
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||||||||||||  | |||||||||||||||||| |||||||    
T  32963204 ctcttatgttaaaatatacacc-ctcctctcttgaaaagtaaactttatac 32963155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 37147770 - 37147831
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatt 416  Q
    ||||||||| | |||  ||||||||||||||||||||||| ||||| |||||||| |||||||    
T  37147770 aattacactcctctcccctcttatgttaaaatatacactt-ccctcccttgaaaattaaaatt 37147831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 37423807 - 37423849
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacact 392  Q
    ||||||||||||| |||||  ||||||||||||||||||||||    
T  37423807 cttaaattacactcccctcccctcttatgttaaaatatacact 37423849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 414
Target Start/End: Complemental strand, 16960955 - 16960859
Alignment:
Q  317 tgagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaa 414  Q
    |||||||||||||||||| || | | | | |  ||| ||||| ||| |||||  ||||||||||||||||||||| ||| |||||||||||| |||||    
T  16960955 tgagtaaattacacccccctcccctcaaagattcttgaattatactcccctctcctcttatgttaaaatatacac-tcctctctcttgaaaaataaaa 16960859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 421
Target Start/End: Complemental strand, 17723465 - 17723397
Alignment:
Q  352 taaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||| |||||  || |||||||||||||||||| |  |||| |||||||| ||||||||||||    
T  17723465 taaattacactcccctccccttttatgttaaaatatacacct-tcctcccttgaaaaataaaatttatac 17723397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 9785300 - 9785241
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaa 414  Q
    ||||||||||||||| | ||| || ||||||||||||| ||| |||||||||||| |||||    
T  9785300 aattacacttccctctattctaatattaaaatatacac-tcctctctcttgaaaaataaaa 9785241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 29979104 - 29979147
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaat 415  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||    
T  29979104 ctctaatgttaaaatatacact-ctcctctcttgaaaagtaaaat 29979147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 390
Target Start/End: Original strand, 45847166 - 45847202
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatataca 390  Q
    |||||||||||||||  ||||||||||||||||||||    
T  45847166 aattacacttccctcccctcttatgttaaaatataca 45847202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 418
Target Start/End: Original strand, 100029 - 100097
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    |||| ||||||||||| |||  ||||||||||||||||||||| || |||||||||||||||||||||||    
T  100029 acttgaattacacttctctcccctcttatgttaaaatatacac-tctcctctcttgaaaagtaaaattta 100097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 418
Target Start/End: Original strand, 11320 - 11383
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattta 418  Q
    |||||||||| ||||  ||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  11320 aattacactttcctcccctcttatgttaaaatatacac-tcccctcccttgaaaagtaaaattta 11383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 59291 - 59357
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||  ||||  |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  59291 aattacactctcctcccctcttatgttaaaatatacact-cccctcccttgaaaagtaaaatttatac 59357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 11338 - 11238
Alignment:
Q  317 tgagtaaattacac-ccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaat 415  Q
    |||||||||||||| ||||| | ||||| | | |||| ||||||||| |||||  ||||||||||||||||||||| |||||||  ||||||||||||||    
T  11338 tgagtaaattacactcccctccccttaa-agatacttgaattacactcccctccgctcttatgttaaaatatacac-tcccctcctttgaaaagtaaaat 11241  T
Q  416 tta 418  Q
    |||    
T  11240 tta 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 2254 - 2320
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  ||||||||||||||| ||||| ||||||| ||||||||| |||||||||||    
T  2254 aattacactcccctcccctcttatgttaaaatttacac-tcccctcccttgaaaagaaaaatttatac 2320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 421
Target Start/End: Complemental strand, 17228 - 17126
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| |||  ||||| || ||| |||||||||  | ||  ||||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  17228 gagtaaattacactcccctcttctaagagaagcttgaattacactcacatcccctcttatgttaaaatatacac-tcccctcccttaaaaaataaaattt 17130  T
Q  418 atac 421  Q
    ||||    
T  17129 atac 17126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 421
Target Start/End: Original strand, 25901 - 26003
Alignment:
Q  318 gagtaaattacacccccttctcttaagaaaaacttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaattt 417  Q
    ||||||||||||| ||| |||| ||||| || ||| |||||||||   |||   |||||||||||||||||||| ||||||  ||| |||||||||||||    
T  25901 gagtaaattacactcccctctcctaagagaagcttgaattacactctactctcatcttatgttaaaatatacac-tcccctgccttaaaaagtaaaattt 25999  T
Q  418 atac 421  Q
    ||||    
T  26000 atac 26003  T

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Target: scaffold0289 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 424
Target Start/End: Complemental strand, 4091 - 4022
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccc 424  Q
    ||||||||| |||||   |||||||||||||||||||||| || || |||||||| |||||||||||||||    
T  4091 aattacactcccctcccatcttatgttaaaatatacactt-ccgtcccttgaaaattaaaatttatacccc 4022  T

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Target: scaffold0201 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 396
Target Start/End: Complemental strand, 16038 - 15996
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttccc 396  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  16038 aattacacttccctcatctcttatgttaaaatatacagttccc 15996  T

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Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 421
Target Start/End: Original strand, 26381 - 26449
Alignment:
Q  351 ttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    |||||||||||| || ||| |||||||||| |||||||||| ||||||| |||||||||||||||| ||||    
T  26381 ttaaattacactcccttcatctcttatgtt-aaatatacac-tcccctcccttgaaaagtaaaattgatac 26449  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 14749 - 14700
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  14749 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaatatttatac 14700  T

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Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 28895 - 28846
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  28895 ctcttatgttaaaatatacac-tcccctcccttgaaaagtaatatttatac 28846  T

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Target: scaffold0003; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 421178 - 421236
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaa 413  Q
    ||||||||| |||||  ||||||||||||||||||||| ||||||| || ||||||||||    
T  421178 aattacactcccctcccctcttatgttaaaatatacac-tcccctccctagaaaagtaaa 421236  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 421
Target Start/End: Original strand, 161284 - 161354
Alignment:
Q  350 cttaaattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||  |||  ||||||||||||||||||||| |||||||  |||| |||||||| ||||||    
T  161284 cttaaattacacttttctcccctcttatgttaaaatatacac-tcccctccattgagaagtaaaacttatac 161354  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 426
Target Start/End: Complemental strand, 185211 - 185157
Alignment:
Q  371 ctcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatacccctc 426  Q
    ||||||||||||||||||||||  || || ||||||||||||||||||||| ||||    
T  185211 ctcttatgttaaaatatacactctccttc-cttgaaaagtaaaatttatactcctc 185157  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 863 - 786
Alignment:
Q  349 acttaaattacacttccctcaactcttatgttaaaatatacacttccc-ctctcttgaaaagtaaaatttatacccctc 426  Q
    |||||||||||||| |||||| || |||||||||||||| |||||||| | | |||| |||| ||||||||||| ||||    
T  863 acttaaattacact-ccctcatcttttatgttaaaatatgcacttccctcccccttggaaagaaaaatttatactcctc 786  T

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Target: scaffold0971 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0971
Description:

Target: scaffold0971; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 421
Target Start/End: Original strand, 3152 - 3196
Alignment:
Q  376 atgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||    
T  3152 atgttaaaatatacact-cccctcccttgaaaagtaaaattgatac 3196  T

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Target: scaffold0159 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 421
Target Start/End: Original strand, 34413 - 34477
Alignment:
Q  354 aattacacttccctcaactcttatgttaaaatatacacttcccctctcttgaaaagtaaaatttatac 421  Q
    ||||||||| |||||  |||||||||||||||||||| |||| | | |||||||| ||||||||||||    
T  34413 aattacactcccctc--ctcttatgttaaaatataca-ttcctcacccttgaaaaataaaatttatac 34477  T

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