View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18649_high_32 (Length: 252)
Name: NF18649_high_32
Description: NF18649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18649_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 235
Target Start/End: Original strand, 27907208 - 27907430
Alignment:
| Q |
13 |
aaaataccaccaagaagaagggataaaatagaattatttgcatttgataggaaaaagacgaaagagttagtagaaaagtgaaaatggctcatagctaatg |
112 |
Q |
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| T |
27907208 |
aaaataccaccaagaagaagtgataaaatagaattatttgcatttgataggaaaaagacgaaagagttagtagaaaagtgaaaatggctcatagctaatg |
27907307 |
T |
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| Q |
113 |
ccaaaaaacatgctgcaagcaacttagctttaaaagcaaagacaaaacatgtatctcatcaatctatgtatcatgaactttctcacttattttgtactag |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27907308 |
ccaaaaaacatgctgcaagcaacttagctttaaaagcaaagacaaaacatgtatctcatcaatctatgtatcatgaactttctcacttattttgtactag |
27907407 |
T |
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| Q |
213 |
atgatgctacttgtaagaggagg |
235 |
Q |
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||||||||||||||||||||||| |
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| T |
27907408 |
atgatgctacttgtaagaggagg |
27907430 |
T |
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