View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18650_high_6 (Length: 368)
Name: NF18650_high_6
Description: NF18650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18650_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 30 - 339
Target Start/End: Original strand, 41097775 - 41098081
Alignment:
| Q |
30 |
gtatgttgatcagggaagaagggtatggtttaaagttttaacagttaaatatgaagttgaagagggtcataccaagagtggtgggttacaggcgtcactg |
129 |
Q |
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| T |
41097775 |
gtatgttgatcag---agaaggttatggtttaaagttttaacagttaaatatgaagttgaagagggtcataccaggagtggtgggttacaggcgtcactg |
41097871 |
T |
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| Q |
130 |
tggtgaaatgagttatggtctattagcaagggtgtagtaggtggggaggtgagttggtttaaggagaaggtggtttgaaagattggagatgggtagaaca |
229 |
Q |
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| T |
41097872 |
tggtgaaatgagttatggtctattagcaagggtgtagtaggtggggaggtgagttggtttaaggagaaggtggtttgaaagattggagatgggtagagca |
41097971 |
T |
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| Q |
230 |
cctcattttagtgtcatccttggttagagagcgggtgcctgtgtcttagattttagcgtctatattatttagttgatgattgatgtgttaccgtaacgaa |
329 |
Q |
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|||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41097972 |
cctcattttaatgtcatccttggttagagggcgagtgcctgcgtcttagattttagcgtctatattatttagttgatgattgatgtgttaccgtaacgaa |
41098071 |
T |
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| Q |
330 |
gaagcagagg |
339 |
Q |
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| T |
41098072 |
gaagcagagg |
41098081 |
T |
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