View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18651_high_26 (Length: 317)
Name: NF18651_high_26
Description: NF18651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18651_high_26 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 37183379 - 37183694
Alignment:
| Q |
1 |
cgaattgttttctcaaaacttgatccgcgggagaggtctcttctgcagatcccttatgaactcacagatggcctatccg-agtataccattgagtttgcc |
99 |
Q |
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| T |
37183379 |
cgaattgttttctcaaaacttgatccgcgggagagggctcttctgcagatcccttatga--tcacagatggcctatccggagtataccattgagtttgcc |
37183476 |
T |
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| Q |
100 |
gcgcttgttgcggtcgtaaattccaagtttcctgaggtcggtaatctcttactcagaagaattgttttgcaattcaaaagggcttatcataggaatgaca |
199 |
Q |
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| T |
37183477 |
gcgcttgttgcggtcgtaaattccaagtttcctgaagtcggtaatcttttactcagaagaattgttttgcaattcaaatgggcttatcataggaatgaca |
37183576 |
T |
|
| Q |
200 |
agcctcatcagttacatgctactgttaagtttatagcacgtttggtgaaacagctagttgcacatgagattattgctttggtaatactcacggttttgct |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
37183577 |
agcctcatcagttacatgctactgttaagtttatagcacatttggtgaaacagctagttgcacatgagattattgctttggaaatactcacggttttgct |
37183676 |
T |
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| Q |
300 |
tgataaccctattgatga |
317 |
Q |
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|||||||||||||||||| |
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| T |
37183677 |
tgataaccctattgatga |
37183694 |
T |
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