View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18651_high_28 (Length: 306)
Name: NF18651_high_28
Description: NF18651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18651_high_28 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 13 - 288
Target Start/End: Original strand, 27825626 - 27825901
Alignment:
| Q |
13 |
aatattttcatttgtgaatcaaagcgtcattgtcttttgttaaataatcgtcaagaatttgattatatctcagatatattgaaattgtattgattaatga |
112 |
Q |
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| T |
27825626 |
aatattttcatttgtgaatcaaagcgtcattgtcttttgttagataattgtcaagaatttgattatatctcagatatattgaaattgtattgattaatga |
27825725 |
T |
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| Q |
113 |
aatgagttaagnnnnnnnctcttaaaacttccaccaaatttattttatcaatgattaatttccgctagaaaacagcccattatccacacacttattaatt |
212 |
Q |
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||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27825726 |
aatgagttaagtttttttctctaaaaacttccaccaaatttattttatcaatgattaatttccgctagaaaacagcccattatccacacacttattaatt |
27825825 |
T |
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| Q |
213 |
atgtcggcacttatcctttccatagactgccatagtcatccttaaattaaactagtatagtgttgaatgtatatct |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
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| T |
27825826 |
atgtcggcacttatcctttccatagactgccatagtcatccttaaattaaaccagtatcgtgttgaatgtatatct |
27825901 |
T |
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