View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18651_high_8 (Length: 487)
Name: NF18651_high_8
Description: NF18651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18651_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 73 - 475
Target Start/End: Original strand, 43653786 - 43654188
Alignment:
| Q |
73 |
ggacatacctgggcaagattgacattgacataactggtctttatcatgagaagaagtattattattgtctttgcaattttgacaacttttcaaaacattt |
172 |
Q |
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| T |
43653786 |
ggacatacctgggcaagattgacattgacataactggtctttatcatgagaagaagtattattattgtctttgcaattttgacaacttttcaaaacattt |
43653885 |
T |
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| Q |
173 |
ttcaacctgttatattcaatatgtgcacaattctcatccaatagccactcccgctccacctgcaggtactctttgaatgtgtatccgaatttcatttcgc |
272 |
Q |
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| T |
43653886 |
ttcaacctgttatattcaatatgtgcacaattctcatccaatagccactcccgctccacctgcaggtactctttgaatgtgtatccgaatttcatttcgc |
43653985 |
T |
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| Q |
273 |
tatttccaaatcctaattaaatattaattaatcaataaatcagtgttcgaaaattggtaaaatattcgcaattgtgttgagcctcacatgtatgagatca |
372 |
Q |
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| T |
43653986 |
tatttccaaatcctaattaaatattaattaatcaataaatcagtgttcgaaaattggtaaaatattcgcaattgtgttgagcctcaaatgtatgagatca |
43654085 |
T |
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| Q |
373 |
gcttgagagaatcagaaataataatatcttttaataagtnnnnnnnnnnnnncgacgaggaggatgaaatgaataggaaaaaggtaaatattctgagaag |
472 |
Q |
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| T |
43654086 |
gcttgagagaatcagaaataataatatcttttaataagtaaaaatgaaaaaacgacgaggaggatgaaatgaataggaaaaaggtaaatattctgagaag |
43654185 |
T |
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| Q |
473 |
aat |
475 |
Q |
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| T |
43654186 |
aat |
43654188 |
T |
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