View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18652_high_4 (Length: 484)

Name: NF18652_high_4
Description: NF18652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18652_high_4
NF18652_high_4
[»] chr3 (16 HSPs)
chr3 (89-314)||(18946276-18946501)
chr3 (89-297)||(45031595-45031802)
chr3 (98-231)||(47867733-47867866)
chr3 (100-232)||(37222550-37222682)
chr3 (89-185)||(48161724-48161820)
chr3 (92-185)||(55146798-55146891)
chr3 (93-185)||(30716110-30716202)
chr3 (100-194)||(4950652-4950745)
chr3 (335-413)||(52560280-52560358)
chr3 (333-412)||(48165257-48165337)
chr3 (100-164)||(53562252-53562315)
chr3 (333-412)||(13933-14012)
chr3 (349-412)||(45031512-45031575)
chr3 (155-218)||(52560502-52560564)
chr3 (115-148)||(18894101-18894134)
chr3 (334-411)||(18942600-18942677)
[»] chr2 (12 HSPs)
chr2 (89-314)||(19507921-19508146)
chr2 (100-232)||(26170591-26170723)
chr2 (89-172)||(40614476-40614559)
chr2 (100-194)||(34457177-34457270)
chr2 (100-185)||(29899377-29899462)
chr2 (327-411)||(28654696-28654780)
chr2 (100-166)||(2121036-2121101)
chr2 (318-411)||(13329744-13329837)
chr2 (348-413)||(44070745-44070810)
chr2 (326-414)||(31500777-31500865)
chr2 (110-147)||(21831310-21831347)
chr2 (327-411)||(2119445-2119529)
[»] chr7 (20 HSPs)
chr7 (173-314)||(42013721-42013862)
chr7 (162-314)||(34195216-34195367)
chr7 (89-183)||(46529237-46529331)
chr7 (89-228)||(13953205-13953344)
chr7 (89-167)||(3938711-3938789)
chr7 (100-218)||(1804818-1804935)
chr7 (110-216)||(17733830-17733936)
chr7 (100-216)||(31592553-31592668)
chr7 (329-412)||(42014574-42014657)
chr7 (333-407)||(41957697-41957771)
chr7 (100-146)||(41957980-41958026)
chr7 (307-368)||(34192024-34192085)
chr7 (118-194)||(11409457-11409533)
chr7 (89-163)||(28510509-28510583)
chr7 (333-411)||(45075208-45075286)
chr7 (117-166)||(2393261-2393310)
chr7 (352-413)||(42013596-42013657)
chr7 (100-143)||(45414538-45414580)
chr7 (318-371)||(40792995-40793048)
chr7 (356-412)||(39881340-39881396)
[»] chr4 (10 HSPs)
chr4 (100-232)||(12028099-12028231)
chr4 (89-185)||(39390634-39390730)
chr4 (1-92)||(5182446-5182537)
chr4 (1-92)||(4856794-4856885)
chr4 (89-182)||(55741190-55741283)
chr4 (100-185)||(31302498-31302582)
chr4 (100-216)||(54603949-54604064)
chr4 (1-92)||(5160201-5160292)
chr4 (4-74)||(7142383-7142456)
chr4 (1-74)||(5173117-5173190)
[»] chr5 (8 HSPs)
chr5 (100-232)||(7250234-7250366)
chr5 (93-185)||(19870703-19870795)
chr5 (89-155)||(9042147-9042213)
chr5 (100-185)||(10826811-10826896)
chr5 (100-184)||(42449763-42449847)
chr5 (100-164)||(23062451-23062514)
chr5 (146-185)||(9042232-9042271)
chr5 (333-395)||(34393995-34394057)
[»] chr8 (8 HSPs)
chr8 (100-231)||(1550772-1550902)
chr8 (101-185)||(44119158-44119242)
chr8 (100-158)||(23877952-23878010)
chr8 (110-218)||(20495294-20495402)
chr8 (329-413)||(40494077-40494161)
chr8 (114-166)||(23718470-23718522)
chr8 (100-148)||(42100502-42100549)
chr8 (333-412)||(41270304-41270383)
[»] chr6 (4 HSPs)
chr6 (89-185)||(5614045-5614141)
chr6 (89-182)||(1259813-1259906)
chr6 (114-182)||(19273473-19273541)
chr6 (333-412)||(5620757-5620836)
[»] chr1 (10 HSPs)
chr1 (100-185)||(31385559-31385644)
chr1 (100-184)||(42465089-42465173)
chr1 (100-194)||(46200928-46201021)
chr1 (100-162)||(13706360-13706421)
chr1 (327-417)||(4911548-4911638)
chr1 (114-216)||(18239663-18239765)
chr1 (100-185)||(15292541-15292625)
chr1 (131-185)||(27108852-27108906)
chr1 (326-412)||(31387947-31388033)
chr1 (117-185)||(42058403-42058471)
[»] scaffold0251 (1 HSPs)
scaffold0251 (100-216)||(1807-1922)
[»] scaffold0013 (1 HSPs)
scaffold0013 (100-182)||(86664-86751)
[»] scaffold1813 (1 HSPs)
scaffold1813 (100-194)||(609-702)
[»] scaffold0184 (1 HSPs)
scaffold0184 (100-194)||(28399-28492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (100-194)||(44352-44445)


Alignment Details
Target: chr3 (Bit Score: 182; Significance: 3e-98; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 89 - 314
Target Start/End: Original strand, 18946276 - 18946501
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatg 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||    
T  18946276 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaataacttacttgtgaattaattgatgaaatttgaatg 18946375  T
Q  189 attttcaagcaaattgaagtttgggtgattgttggttatatttttgaatgaagtttgcatgtatgtaatgagaaactgaaggtttctgcgttttgttaag 288  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  18946376 attttcgagcaaattgaagtttgggtgattgttggttatatttttgaatgaagtttgcatgtatgtaatgagaaactggaggtttctgcgatatgttaag 18946475  T
Q  289 atacataatacaacagtagttaacta 314  Q
    ||||| ||| ||||||| | ||||||    
T  18946476 atacagaatgcaacagtcggtaacta 18946501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 89 - 297
Target Start/End: Complemental strand, 45031802 - 45031595
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatg 188  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| |||    
T  45031802 tttgctcaaatttatgaaaactaacatcctaaacaaactacattgcatgtaaacaggaaggaaataacttacttgtgaattaattgatgaaatttgaatg 45031703  T
Q  189 attttcaagcaaattgaagtttgggtgattgttggttatatttttgaatgaagtttgcatgtatgtaatgagaaactgaaggtttctgcgttttgttaag 288  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||| ||| |||||| || ||| |||||||    
T  45031702 attttcgagcaaattgaagtttgggtgattattggttatacttttgaatggagtttgcatgtatgtaatgagaatctggaggtttttg-gttctgttaag 45031604  T
Q  289 atacataat 297  Q
    |||||||||    
T  45031603 atacataat 45031595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 47867866 - 47867733
Alignment:
Q  98 atttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaag 197  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| |||| || | ||||||  ||||| |||||||||||||||||||||||||| ||    
T  47867866 atttatgaaaactaacaccctaagcaacctacattgcatgtaaataagaagaaaggtacttaccagtgaattaattgatgaaatttggatgattttcgag 47867767  T
Q  198 caaattgaagtttgggtgattgttggttatattt 231  Q
    ||||||||||||||||||||| ||||||||||||    
T  47867766 caaattgaagtttgggtgatttttggttatattt 47867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 37222550 - 37222682
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    |||||||||||||||||||||  || |||||||||||||||||| |||| || | |||| ||||| || |||||||||||||||||||||||||| ||||    
T  37222550 ttatgaaaactaacaccctaagaaacctacattgcatgtaaataagaagaaaggtactttcttgtaaattaattgatgaaatttggatgattttcgagca 37222649  T
Q  200 aattgaagtttgggtgattgttggttatatttt 232  Q
    ||||||||||||||||||| |||||||||||||    
T  37222650 aattgaagtttgggtgatttttggttatatttt 37222682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 48161820 - 48161724
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  48161820 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaagaaaagaacttacttatgaattaattgatgaaatttgg 48161724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 55146891 - 55146798
Alignment:
Q  92 gctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  55146891 gctcaaaattatgaaaactaacaccctaaagaaactacattgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttgg 55146798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 30716202 - 30716110
Alignment:
Q  93 ctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30716202 ctcaaaattatgaaaactaacaccctaaacaaactacactgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttgg 30716110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 4950652 - 4950745
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttc 194  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||  || |||| | || |||||||||||||    
T  4950652 ttatgaaaa-taacaccctaaacaaactaccttgcatgtaaatagaaagaaaataacttacttgtgatttacttgaagcaaattggatgattttc 4950745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 52560358 - 52560280
Alignment:
Q  335 tgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttcta 413  Q
    ||||||||| || ||||||||||||| |||||||||| ||| ||||| ||||||||||||||| |||| ||||||||||    
T  52560358 tgttaactgccgctggaggcatttacgtattttacttgtgtcaataggaaggtttcattgtcaaaaaagcaattttcta 52560280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 48165257 - 48165337
Alignment:
Q  333 gttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtc-acaaaaacaattttct 412  Q
    ||||||||||| |||||||||||||||| |||||||||| ||| ||||| ||| |||||||||| | ||||||||||||||    
T  48165257 gttgttaactgccgttggaggcatttacgtattttacttatgtcaataggaagatttcattgtcaaaaaaaacaattttct 48165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 53562252 - 53562315
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgt 164  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||| || | ||||||||||    
T  53562252 ttatgaaaac-aacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgt 53562315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 13933 - 14012
Alignment:
Q  333 gttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttct 412  Q
    ||||||||||| || |||||||||| ||||||||||||| ||| ||||| || |||||||||| | |||| |||||||||    
T  13933 gttgttaactgccgctggaggcattaacatattttacttgtgtcaataggaaagtttcattgttaaaaaagcaattttct 14012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 45031575 - 45031512
Alignment:
Q  349 ggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttct 412  Q
    |||||||||||| ||||||| || ||| ||||| ||| ||||||||||| |||| |||||||||    
T  45031575 ggaggcatttacgtattttatttgtgtcaataggaagatttcattgtcaaaaaagcaattttct 45031512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 52560564 - 52560502
Alignment:
Q  155 acttacttgtgaaataattgatgaaatttggatgattttcaagcaaattgaagtttgggtgatt 218  Q
    ||||||||||||  || ||||||||||| ||||||||||| |||||| ||| ||||||||||||    
T  52560564 acttacttgtgatttacttgatgaaattaggatgattttcgagcaaa-tgaggtttgggtgatt 52560502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 18894134 - 18894101
Alignment:
Q  115 ccctaaacaaactacattgcatgtaaataggaag 148  Q
    |||||||||| |||||||||||||||||||||||    
T  18894134 ccctaaacaacctacattgcatgtaaataggaag 18894101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 18942677 - 18942600
Alignment:
Q  334 ttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttc 411  Q
    |||||||| | |||| | ||||||| | |||||||||| ||| ||||| ||  ||||||||||| |||||||||||||    
T  18942677 ttgttaacggccgttaggggcatttgcgtattttacttgtgtcaataggaaattttcattgtcagaaaaacaattttc 18942600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 89 - 314
Target Start/End: Complemental strand, 19508146 - 19507921
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatg 188  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19508146 tttgctcaaaattataaaaactaacaccctaaacaaagtacattgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttggatg 19508047  T
Q  189 attttcaagcaaattgaagtttgggtgattgttggttatatttttgaatgaa-gtttgcatgtatgtaatgagaaactgaaggtttctgcgttttgttaa 287  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| | ||||    
T  19508046 attttcgagcaaattgaagtttgggtgatttttggttata-ttttgaatgaaggtttgcatgtatgtaatgagaaactggaggtttctgcgttctattaa 19507948  T
Q  288 gatacataatacaacagtagttaacta 314  Q
    |||||||||| |||| |||||||||||    
T  19507947 gatacataatgcaacggtagttaacta 19507921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 26170723 - 26170591
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    |||||| |||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  26170723 ttatgagaactaacaccctaaacaacctacattgcatgtaaataagaagaaaagaacttacttgtgagttaattgatgaaatttggatgattttcgagca 26170624  T
Q  200 aattgaagtttgggtgattgttggttatatttt 232  Q
    ||||||||||| ||||||  |||||||||||||    
T  26170623 aattgaagtttaggtgatatttggttatatttt 26170591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 40614476 - 40614559
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataat 172  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  40614476 tttgctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtatataggaaggaaagaacttacttgtgaattaat 40614559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 34457270 - 34457177
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttc 194  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||  || |||| | || |||||||||||||    
T  34457270 ttatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaagaaaataacttacttgtgatttacttgaagcaaattggatgattttc 34457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 29899462 - 29899377
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||| ||| ||| ||||||| || || |||| |||||||||    
T  29899462 ttatgaaaactaacaccctaaacaacctacattgcattgaaataggaagaaaataacatacttgttaattacttgaagaaatttgg 29899377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 411
Target Start/End: Original strand, 28654696 - 28654780
Alignment:
Q  327 ccaacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttc 411  Q
    ||||| ||||||||||| || ||| |||||||   |||||||||| ||| ||||||||||||||||||| | |||||||||||||    
T  28654696 ccaacggttgttaactgccgctgggggcatttcagtattttacttgtgtcaatagaaaggtttcattgttagaaaaacaattttc 28654780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 2121036 - 2121101
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 166  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||   ||||||||||||    
T  2121036 ttatgaaaa-taacaccctgaacaacctacattgcatgtaaataggaagaaatatacttacttgtga 2121101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 411
Target Start/End: Complemental strand, 13329837 - 13329744
Alignment:
Q  318 gcggttcttccaacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttc 411  Q
    ||||||||| |||| || ||||||| ||| | |||||||| ||||  ||||||| ||| ||||| |||  |||||||||| |||||||||||||    
T  13329837 gcggttctttcaacggtagttaactatcgctagaggcattaacatcatttacttgtgttaataggaagtattcattgtcaaaaaaacaattttc 13329744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 44070810 - 44070745
Alignment:
Q  348 tggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttcta 413  Q
    ||||||||||||| |||||||||| ||| ||||| || |||||||||||| |||| ||||| ||||    
T  44070810 tggaggcatttacgtattttacttgtgtcaataggaatgtttcattgtcaaaaaagcaattctcta 44070745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 414
Target Start/End: Complemental strand, 31500865 - 31500777
Alignment:
Q  326 tccaacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttctat 414  Q
    |||||| ||||||||||| || || ||||||||   |||||||||| ||| ||||  ||| ||||||||||| |||| |||||||||||    
T  31500865 tccaacggttgttaactgccgctgaaggcattttagtattttacttgtgtcaatatgaagttttcattgtcagaaaagcaattttctat 31500777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 21831347 - 21831310
Alignment:
Q  110 taacaccctaaacaaactacattgcatgtaaataggaa 147  Q
    ||||||||||||||| || |||||||||||||||||||    
T  21831347 taacaccctaaacaaccttcattgcatgtaaataggaa 21831310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 2119529 - 2119445
Alignment:
Q  327 ccaacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttc 411  Q
    ||||| ||||||||||| || |||  ||||||  ||||||||||| ||| ||||  ||| ||||||||||| |||| ||||||||    
T  2119529 ccaacggttgttaactgccgctgggagcatttcaatattttacttgtgtcaatatgaagttttcattgtcagaaaatcaattttc 2119445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 42013862 - 42013721
Alignment:
Q  173 tgatgaaatttggatgattttcaagcaaattgaagtttgggtgattgttggttatatttttgaatgaagtttgcatgtatgtaatgagaaactgaaggtt 272  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  || |||||    
T  42013862 tgatgaaatttggatgattttcgaacaaattgaagtttggatgattgttggttatattttttaatgaagtttgcatgtatgtaatgagaatttggaggtt 42013763  T
Q  273 tctgcgttttgttaagatacataatacaacagtagttaacta 314  Q
    |||||||| |||||||||||| ||| |||| |||||||||||    
T  42013762 tctgcgttatgttaagatacagaatgcaacggtagttaacta 42013721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 162 - 314
Target Start/End: Complemental strand, 34195367 - 34195216
Alignment:
Q  162 tgtgaaataattgatgaaatttggatgattttcaagcaaattgaagtttgggtgattgttggttatatttttgaatgaagtttgcatgtatgtaatgaga 261  Q
    |||||| |||||||||||||||||||||||| | ||||||||||| |||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||    
T  34195367 tgtgaattaattgatgaaatttggatgatttccgagcaaattgaaatttgggtgattgtttgttata-ttttgaatgaaatttacatgtatgtaatgaga 34195269  T
Q  262 aactgaaggtttctgcgttttgttaagatacataatacaacagtagttaacta 314  Q
    ||||  |||||||| |||| |||||||||||| ||| |||| |||||||||||    
T  34195268 aactagaggtttctacgttctgttaagatacagaatgcaacggtagttaacta 34195216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 46529237 - 46529331
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaattt 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||    
T  46529237 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatttaaataggaaggaaataacttacttgtgaattaattgatgaaattt 46529331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 13953205 - 13953344
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatg 188  Q
    ||||||||||  |||| ||| ||| ||| ||||||||||||||||| |||||||| |||| | | |||||||||||||| ||||||||||||||||  ||    
T  13953205 tttgctcaaaaatatgtaaaataaaaccttaaacaaactacattgcttgtaaatatgaagaatataacttacttgtgaattaattgatgaaatttgattg 13953304  T
Q  189 attttcaagcaaattgaagtttgggtgattgttggttata 228  Q
    |||||| ||||||||||||||||||||||| || ||||||    
T  13953305 attttcgagcaaattgaagtttgggtgattttttgttata 13953344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 3938789 - 3938711
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaa 167  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3938789 tttgctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtaaataggaagaaaagaacttacttgtgaa 3938711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 1804818 - 1804935
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||   | |  ||||||||||||  || |||| |||||| ||||||||||| ||||    
T  1804818 ttatgaaaactagcaccctaaacaaactacattgcatgtaaataggattaagatgacttacttgtgatttacttgaagaaattaggatgattttcgagca 1804917  T
Q  200 aattgaagtttgggtgatt 218  Q
    || ||| ||||||||||||    
T  1804918 aa-tgaggtttgggtgatt 1804935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 17733830 - 17733936
Alignment:
Q  110 taacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagcaaattgaagtt 209  Q
    ||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||  || |||| | || |||||||||||||  ||||||  |||||    
T  17733830 taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtgatttacttgaagcaaattggatgattttcgtgcaaatgaaagtt 17733929  T
Q  210 tgggtga 216  Q
    |||||||    
T  17733930 tgggtga 17733936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 31592668 - 31592553
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||  || |||| | || |||||||||||||  |||    
T  31592668 ttatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtgatttacttgaagcaaattggatgattttcgtgca 31592570  T
Q  200 aattgaagtttgggtga 216  Q
    |||  | ||||||||||    
T  31592569 aatgaaggtttgggtga 31592553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 412
Target Start/End: Original strand, 42014574 - 42014657
Alignment:
Q  329 aacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttct 412  Q
    ||||||||||||||| |  ||| ||||||||| |||||||||| ||| ||||||||  ||||||||||| |||| |||||||||    
T  42014574 aacagttgttaactgccactgggggcatttacgtattttacttgtgtcaatagaaatttttcattgtcagaaaagcaattttct 42014657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 41957771 - 41957697
Alignment:
Q  333 gttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaat 407  Q
    ||||||||||| |||||| ||||||||| |||||||| | ||| ||||| ||||||||||||||| |||| ||||    
T  41957771 gttgttaactgccgttgggggcatttacgtattttacgtgtgtcaataggaaggtttcattgtcaaaaaagcaat 41957697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 41958026 - 41957980
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaatagga 146  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||    
T  41958026 ttatgaaaactagcaccctaaacaaactacattgcatctaaatagga 41957980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 34192085 - 34192024
Alignment:
Q  307 gttaactatcagcggttcttccaacagttgttaactgtcgttggaggcatttacatatttta 368  Q
    |||||||| | ||| |||||||||| ||||||||||| |||||||||||||||| |||||||    
T  34192085 gttaactacctgcgattcttccaacggttgttaactgccgttggaggcatttacgtatttta 34192024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 11409457 - 11409533
Alignment:
Q  118 taaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttc 194  Q
    ||||||| ||||||||||||||||| | ||| |||||||||||||||||  || |||| ||| || |||||||||||    
T  11409457 taaacaacctacattgcatgtaaatcgaaagaaaagaacttacttgtgatttacttgaagaagttaggatgattttc 11409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 28510509 - 28510583
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttg 163  Q
    |||||||||| ||| | ||| |||  |||||||||| ||||||||||||||||||||||| |||  |||||||||    
T  28510509 tttgctcaaaattaagtaaaataaagccctaaacaacctacattgcatgtaaataggaagaaaatgacttacttg 28510583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Complemental strand, 45075286 - 45075208
Alignment:
Q  333 gttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttc 411  Q
    ||||||||||| || ||| |||||||   |||||||||| ||| ||||| ||| ||||||||||| |||||||||||||    
T  45075286 gttgttaactgccgctgggggcattttagtattttacttgtgtcaataggaagttttcattgtcagaaaaacaattttc 45075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 2393261 - 2393310
Alignment:
Q  117 ctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 166  Q
    |||||||| ||||||||||||||||||||||| |||  ||||||||||||    
T  2393261 ctaaacaagctacattgcatgtaaataggaagaaaatgacttacttgtga 2393310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 413
Target Start/End: Complemental strand, 42013657 - 42013596
Alignment:
Q  352 ggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttcta 413  Q
    ||||||||| |||||||||| ||| ||||| ||| ||||||||||| |||| ||||||||||    
T  42013657 ggcatttacgtattttacttgtgtcaataggaagatttcattgtcaaaaaagcaattttcta 42013596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Complemental strand, 45414580 - 45414538
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaata 143  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  45414580 ttatgaaaa-taacaccctaaacaaactacattgcgtgtaaata 45414538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 40793048 - 40792995
Alignment:
Q  318 gcggttcttccaacagttgttaactgtcgttggaggcatttacatattttactt 371  Q
    |||||||||||||  ||||||||||| || ||| ||||||||| ||||||||||    
T  40793048 gcggttcttccaatggttgttaactgccgctgggggcatttacgtattttactt 40792995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 39881396 - 39881340
Alignment:
Q  356 tttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttct 412  Q
    ||||| |||||||| | ||| ||||| ||| ||||||||||| ||||||||||||||    
T  39881396 tttacgtattttacatgtgttaataggaagttttcattgtcagaaaaacaattttct 39881340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 12028099 - 12028231
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||| || | ||||||||||||| |||||||||||||||||||||||||| ||||    
T  12028099 ttatgaaaactaacaccctaagcaacctacattgcatgtaaataagaagaaaggtacttacttgtgaattaattgatgaaatttggatgattttcgagca 12028198  T
Q  200 aattgaagtttgggtgattgttggttatatttt 232  Q
    ||||||||||||||||||| |||||||||||||    
T  12028199 aattgaagtttgggtgatttttggttatatttt 12028231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 39390634 - 39390730
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  39390634 tttgctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaggaacttacttgtgaattaattgatgaaatttgg 39390730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5182446 - 5182537
Alignment:
Q  1 aatataatttgatattcttggacctctccagaaacattttagttggttcattcccaagttggttgatagataatcataacatgaaatatttg 92  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5182446 aatataatttgatattcttggacctctccagaaacaatttagttggttcattcccaagttggttgatagataatcataacatgaattatttg 5182537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4856885 - 4856794
Alignment:
Q  1 aatataatttgatattcttggacctctccagaaacattttagttggttcattcccaagttggttgatagataatcataacatgaaatatttg 92  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4856885 aatataatttggtattcttggacctctccagaaacaatttagttggttcattcccaagttcgttgatagataatcataacatgaattatttg 4856794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 55741190 - 55741283
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatt 182  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||    
T  55741190 tttgctcaaaattatgaaaactaacaccctaaacaaactacattgcatgtaaataggaagaaaagaactttcttgtgaattaattgaagaaatt 55741283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 31302582 - 31302498
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||| || || |||| |||||||||    
T  31302582 ttatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaataaaataacttacttgttaattacttgaagaaatttgg 31302498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 54603949 - 54604064
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||| || | ||||||||||||  || |||| | || |||||||||||||  |||    
T  54603949 ttatgaaaa-taacaccctaaacaacctacattgcttgtaaataggaagaaaggtacttacttgtgatttacttgaagcaaattggatgattttcgtgca 54604047  T
Q  200 aattgaagtttgggtga 216  Q
    |||  | ||||||||||    
T  54604048 aatgaatgtttgggtga 54604064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 5160201 - 5160292
Alignment:
Q  1 aatataatttgatattcttggacctctccagaaacattttagttggttcattcccaagttggttgatagataatcataacatgaaatatttg 92  Q
    |||| |||||||| ||  ||||||| ||| ||||||   ||||||| |||| |||||||||||||||| ||||||||||||| || ||||||    
T  5160201 aatacaatttgatgttggtggacctttccggaaacaaaatagttggctcatccccaagttggttgatacataatcataacattaattatttg 5160292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 7142383 - 7142456
Alignment:
Q  4 ataatttgatattcttggacctctccagaaacattttagttggttcattcccaag---ttggttgatagataat 74  Q
    ||||||||  ||||||||||||||||||||||| | ||||||| ||| |||||||   |||||||||| |||||    
T  7142383 ataatttggcattcttggacctctccagaaacaatatagttggctcactcccaagaaattggttgatacataat 7142456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5173117 - 5173190
Alignment:
Q  1 aatataatttgatattcttggacctctccagaaacattttagttggttcattcccaagttggttgatagataat 74  Q
    |||||||||||||| |  |||||||||| || |||| | | ||||| ||| ||||||||||||||||| |||||    
T  5173117 aatataatttgatactgatggacctctctagcaacaatattgttggctcactcccaagttggttgataaataat 5173190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 1e-45; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 7250366 - 7250234
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaaga-acttacttgtgaaataattgatgaaatttggatgattttcaagc 198  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||||||||| |||    
T  7250366 ttatgaaaactaacaccctaagcaacctacattgcatgtaaataagaag-aaagatacttacttgtgaattaattgatgaaatttggatgattttcgagc 7250268  T
Q  199 aaattgaagtttgggtgattgttggttatatttt 232  Q
    |||||||||||||||||||| |||||||||||||    
T  7250267 aaattgaagtttgggtgatttttggttatatttt 7250234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 19870795 - 19870703
Alignment:
Q  93 ctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  19870795 ctcaaaattatgaaaactaacactctaaacaaactacattgcatgtaaataggaaggaaataacttacttgtgaattaattgatgaaatttgg 19870703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 9042147 - 9042213
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaa 155  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  9042147 tttgctcaaatttatgaaaactaacaccctaaacaaactacattacatgtaaatagaaaggaaagaa 9042213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 10826811 - 10826896
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| || || |||| |||||||||    
T  10826811 ttatgaaaactaacaccctaaacaacctacattgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttgg 10826896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 42449763 - 42449847
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttg 184  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| ||| ||| ||||||||||| || || |||| ||||||||    
T  42449763 ttatgaaaactaacaccctaaacaacctacattgcatgcaaatagaaagaaaataacttacttgttaattacttgaagaaatttg 42449847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 23062514 - 23062451
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgt 164  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||  ||| |||||||||||    
T  23062514 ttatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaataaaataacttacttgt 23062451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 9042232 - 9042271
Alignment:
Q  146 aaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  9042232 aaggaaagaacttacttgtgaattaattgatgaaatttgg 9042271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 34394057 - 34393995
Alignment:
Q  333 gttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgt 395  Q
    ||||||||||| || ||||||||||||| |||||||||| ||| |||| ||| ||||||||||    
T  34394057 gttgttaactgccgctggaggcatttacgtattttacttgtgtcaataaaaatgtttcattgt 34393995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 1550902 - 1550772
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||||||||  ||||    
T  1550902 ttatgaaaactaataccctaaacaatctacattgcatgtaaataggaagaaaataacttacttgtg-aattattgatgaaatttggatgattttggagca 1550804  T
Q  200 aattgaagtttgggtgattgttggttatattt 231  Q
    ||||||||||||||||||| | ||||||||||    
T  1550803 aattgaagtttgggtgattttcggttatattt 1550772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 44119158 - 44119242
Alignment:
Q  101 tatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| || || |||| |||| ||||    
T  44119158 tatgaaaactaacaccctaaacaacctacattgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaagttgg 44119242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 23878010 - 23877952
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaactt 158  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  23878010 ttataaaaactaacaccctaaacaatctacattgcatgtaaataggaagaaaagaactt 23877952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 20495294 - 20495402
Alignment:
Q  110 taacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagcaaattgaagtt 209  Q
    ||||||||||||||| ||||||||||||||||||||| | || | ||||||||||||  || ||||   || |||||||||||||  ||||||  | |||    
T  20495294 taacaccctaaacaacctacattgcatgtaaataggaggaaaggtacttacttgtgatttagttgaatcaaattggatgattttcgtgcaaatgaaggtt 20495393  T
Q  210 tgggtgatt 218  Q
    |||||||||    
T  20495394 tgggtgatt 20495402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 40494077 - 40494161
Alignment:
Q  329 aacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttcta 413  Q
    |||||||||||||||||| ||| |  |||||  |||||||||| ||| ||||| ||| ||||||||||| |||| ||||||||||    
T  40494077 aacagttgttaactgtcgatggggatatttaagtattttacttgtgtcaataggaagttttcattgtcagaaaatcaattttcta 40494161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 23718470 - 23718522
Alignment:
Q  114 accctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtga 166  Q
    ||||||||||| ||||||||||||||||||||||| || | ||||| ||||||    
T  23718470 accctaaacaacctacattgcatgtaaataggaagaaaggtacttatttgtga 23718522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 42100502 - 42100549
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaag 148  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||    
T  42100502 ttatgaaaa-taacaccctaaataacctacattgcatgtaaataggaag 42100549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 41270304 - 41270383
Alignment:
Q  333 gttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttct 412  Q
    |||||||||||||| | ||||||||||| |||||||||| ||| ||||  ||  ||||| ||||| |||| |||||||||    
T  41270304 gttgttaactgtcgctagaggcatttacgtattttacttgtgtcaatatgaaattttcactgtcaaaaaagcaattttct 41270383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5614141 - 5614045
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5614141 tttgctcaaacttatgaaaactaacaccctaaacagactacattgcatgtaaataggaaggaaagaacttacttgtgaattaattgatgaaatttgg 5614045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 1259813 - 1259906
Alignment:
Q  89 tttgctcaaatttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatt 182  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  1259813 tttgctcaaaattataaaaactaacaccctaaacaaactacattgcatataaataggaaggaaagaacttacttgtgaattaattgaagaaatt 1259906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 19273473 - 19273541
Alignment:
Q  114 accctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatt 182  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| ||||||    
T  19273473 accctaaacaaactacattgcatgtaaatatgaaggaaaaaacttacttgtgaattaattgaagaaatt 19273541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 5620757 - 5620836
Alignment:
Q  333 gttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttct 412  Q
    ||||||||||| || ||| ||||||||| || ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||    
T  5620757 gttgttaactgccgctgggggcatttacgtagtttacttgtgtcaataggaagttttcattgtcagaaaaacaattttct 5620836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 31385644 - 31385559
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| || || |||| |||||||||    
T  31385644 ttatgaaaactaacaccctaaacaacctacattgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttgg 31385559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 42465089 - 42465173
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttg 184  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||| || || |||| ||||||||    
T  42465089 ttatgaaaactaacaccctaaacaacctacatttcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttg 42465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 46200928 - 46201021
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttc 194  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||  || |||| | || |||||||||||||    
T  46200928 ttatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtgatttacttgaggcaaattggatgattttc 46201021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 13706421 - 13706360
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttactt 162  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||  ||| |||||||||    
T  13706421 ttatgaaaa-taacaccctaaacaaactacattgcatgtaaatagaaacaaaataacttactt 13706360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 417
Target Start/End: Complemental strand, 4911638 - 4911548
Alignment:
Q  327 ccaacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttctatttt 417  Q
    ||||| ||||||||| |||| ||  |||||||  ||||||||||| ||| ||||  ||| ||||||||||| |||||||||||||| ||||    
T  4911638 ccaacggttgttaaccgtcgctgatggcattttaatattttacttgtgtcaatatgaagttttcattgtcaaaaaaacaattttctttttt 4911548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 18239765 - 18239663
Alignment:
Q  114 accctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagcaaattgaagtttggg 213  Q
    ||||||||||| |||||||||| |||||||||| | || | ||||||||||||  || |||| | || |||||||||||||  ||||||  | |||||||    
T  18239765 accctaaacaacctacattgcaagtaaataggatgaaaggtacttacttgtgatttacttgaagcaaattggatgattttcgtgcaaatgaaggtttggg 18239666  T
Q  214 tga 216  Q
    |||    
T  18239665 tga 18239663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 15292541 - 15292625
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  ||  ||| ||||||||||| || || ||||  ||||||||    
T  15292541 ttatgaaaa-taacaccctaaacaaactacaatgcatgtaaataaaaataaaataacttacttgttaattacttgaacaaatttgg 15292625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 27108852 - 27108906
Alignment:
Q  131 ttgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    |||||||||||||||||| ||| ||||||||||| || || |||| |||||||||    
T  27108852 ttgcatgtaaataggaagaaaataacttacttgttaattacttgaagaaatttgg 27108906  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 412
Target Start/End: Original strand, 31387947 - 31388033
Alignment:
Q  326 tccaacagttgttaactgtcgttggaggcatttacatattttacttctgtgaatagaaaggtttcattgtcacaaaaacaattttct 412  Q
    |||||||||||||||||| || |||||||||||   |||||||||| ||| ||||  ||  ||||||| ||| |||| |||||||||    
T  31387947 tccaacagttgttaactgccgctggaggcattttagtattttacttatgtcaatatgaaattttcattatcataaaagcaattttct 31388033  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 42058403 - 42058471
Alignment:
Q  117 ctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttgg 185  Q
    ||||||||||||| |||||||||||||| ||  ||| ||||||||||| || || ||||  ||||||||    
T  42058403 ctaaacaaactacgttgcatgtaaatagaaataaaataacttacttgttaattacttgaacaaatttgg 42058471  T

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Target: scaffold0251 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 1807 - 1922
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttcaagca 199  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||  || |||| | || |||||||||||||  |||    
T  1807 ttatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtgatttacttgaagcaaattggatgattttcgtgca 1905  T
Q  200 aattgaagtttgggtga 216  Q
    |||  | ||||||||||    
T  1906 aatgaaggtttgggtga 1922  T

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Target: scaffold0013 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 182
Target Start/End: Original strand, 86664 - 86751
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaa-----cttacttgtgaaataattgatgaaatt 182  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||     |||||||||||| ||||||| ||||||    
T  86664 ttatgaaaactaacaccctaaacaacctacattgtatgtaaataggaagaaaagaaaagagcttacttgtgaattaattgaagaaatt 86751  T

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Target: scaffold1813 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1813
Description:

Target: scaffold1813; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 609 - 702
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttc 194  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||| || || |||| | || |||||||||||||    
T  609 ttatgaaaa-taacatcctaaacaaactacattgcatgtaaatagaaagaaaataacttacttgttaattacttgaagcaaattggatgattttc 702  T

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Target: scaffold0184 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 28399 - 28492
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttc 194  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||  || |||| | || |||||||||||||    
T  28399 ttatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtgatttagttgaagcaaattggatgattttc 28492  T

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Target: scaffold0078 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 44445 - 44352
Alignment:
Q  100 ttatgaaaactaacaccctaaacaaactacattgcatgtaaataggaaggaaagaacttacttgtgaaataattgatgaaatttggatgattttc 194  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||  || |||| | || |||||||||||||    
T  44445 ttatgaaaa-taacaccctaaacaacctacattgcatgtaaataggaagaaaggtacttacttgtgatttagttgaagcaaattggatgattttc 44352  T

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