View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18654_low_4 (Length: 650)

Name: NF18654_low_4
Description: NF18654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18654_low_4
NF18654_low_4
[»] chr5 (28 HSPs)
chr5 (16-552)||(41987723-41988255)
chr5 (12-132)||(9034987-9035107)
chr5 (16-125)||(31645791-31645900)
chr5 (38-155)||(34893981-34894098)
chr5 (16-104)||(41554469-41554558)
chr5 (16-132)||(6887221-6887337)
chr5 (16-136)||(15710491-15710613)
chr5 (16-102)||(28618589-28618675)
chr5 (16-100)||(29310392-29310476)
chr5 (563-635)||(41987611-41987679)
chr5 (16-104)||(2415383-2415471)
chr5 (16-104)||(6647956-6648044)
chr5 (19-153)||(41357972-41358107)
chr5 (16-102)||(19646084-19646170)
chr5 (16-101)||(33486612-33486698)
chr5 (16-102)||(4070540-4070625)
chr5 (16-98)||(4726971-4727053)
chr5 (16-132)||(41063439-41063553)
chr5 (16-67)||(5378322-5378373)
chr5 (17-98)||(34873849-34873931)
chr5 (16-102)||(37424978-37425067)
chr5 (16-78)||(29154264-29154325)
chr5 (16-91)||(18472767-18472843)
chr5 (16-68)||(28500736-28500788)
chr5 (16-102)||(40565198-40565284)
chr5 (16-57)||(32390690-32390731)
chr5 (16-60)||(6074779-6074823)
chr5 (16-52)||(13079173-13079209)
[»] chr3 (37 HSPs)
chr3 (16-552)||(1220258-1220790)
chr3 (16-125)||(1165439-1165548)
chr3 (16-125)||(20201101-20201210)
chr3 (16-125)||(20203283-20203392)
chr3 (16-125)||(43029645-43029754)
chr3 (16-125)||(50519752-50519861)
chr3 (16-125)||(41882451-41882560)
chr3 (16-155)||(21803462-21803601)
chr3 (563-635)||(1220834-1220902)
chr3 (31-130)||(35501817-35501915)
chr3 (19-125)||(22286795-22286901)
chr3 (16-102)||(25374113-25374199)
chr3 (37-106)||(4019583-4019651)
chr3 (31-99)||(45664217-45664285)
chr3 (22-102)||(40462044-40462124)
chr3 (19-102)||(1806506-1806589)
chr3 (16-102)||(20251636-20251723)
chr3 (37-104)||(53426787-53426854)
chr3 (16-69)||(14741368-14741421)
chr3 (16-69)||(29182651-29182704)
chr3 (16-101)||(43839561-43839644)
chr3 (16-92)||(33076307-33076383)
chr3 (47-150)||(22843988-22844091)
chr3 (16-102)||(42106096-42106183)
chr3 (32-70)||(29776747-29776785)
chr3 (16-102)||(37051609-37051695)
chr3 (18-104)||(43242794-43242880)
chr3 (16-69)||(34766998-34767050)
chr3 (16-69)||(3088705-3088758)
chr3 (16-104)||(50460177-50460263)
chr3 (16-102)||(40797018-40797104)
chr3 (16-70)||(39340216-39340270)
chr3 (16-102)||(913359-913447)
chr3 (31-100)||(11846602-11846671)
chr3 (20-77)||(26412342-26412399)
chr3 (16-89)||(33070152-33070225)
chr3 (16-68)||(47914636-47914687)
[»] chr8 (45 HSPs)
chr8 (16-131)||(9269977-9270092)
chr8 (16-125)||(31874046-31874155)
chr8 (16-96)||(9992656-9992736)
chr8 (16-102)||(16937382-16937468)
chr8 (16-130)||(36545824-36545938)
chr8 (19-102)||(15665524-15665607)
chr8 (16-102)||(37658951-37659037)
chr8 (19-102)||(26937510-26937593)
chr8 (16-98)||(8054851-8054933)
chr8 (16-125)||(13864321-13864430)
chr8 (16-104)||(14530951-14531039)
chr8 (16-92)||(15237680-15237756)
chr8 (16-107)||(16938314-16938406)
chr8 (16-104)||(44295299-44295387)
chr8 (16-102)||(32256764-32256851)
chr8 (44-102)||(10042746-10042804)
chr8 (16-93)||(5989624-5989701)
chr8 (16-101)||(284518-284603)
chr8 (16-101)||(631274-631359)
chr8 (16-101)||(817086-817171)
chr8 (11-100)||(11655948-11656037)
chr8 (19-106)||(14919438-14919523)
chr8 (16-101)||(27534442-27534527)
chr8 (16-81)||(32412797-32412861)
chr8 (16-153)||(12244259-12244398)
chr8 (16-102)||(32061779-32061865)
chr8 (16-102)||(32920637-32920723)
chr8 (31-84)||(17019107-17019160)
chr8 (31-84)||(17549544-17549597)
chr8 (16-76)||(16808889-16808948)
chr8 (16-131)||(23766698-23766811)
chr8 (16-95)||(18190887-18190966)
chr8 (73-132)||(31713135-31713194)
chr8 (16-102)||(14327464-14327550)
chr8 (16-69)||(2628932-2628984)
chr8 (16-93)||(3028070-3028147)
chr8 (16-102)||(3680906-3680994)
chr8 (16-64)||(5327989-5328038)
chr8 (36-105)||(7269527-7269596)
chr8 (16-69)||(16996930-16996982)
chr8 (16-104)||(1215382-1215470)
chr8 (22-101)||(5917790-5917866)
chr8 (16-94)||(6833471-6833551)
chr8 (16-104)||(31147844-31147931)
chr8 (16-64)||(41996568-41996616)
[»] chr4 (41 HSPs)
chr4 (16-125)||(9661815-9661924)
chr4 (16-125)||(16991834-16991943)
chr4 (31-132)||(28588516-28588617)
chr4 (20-104)||(41486558-41486642)
chr4 (16-125)||(4634245-4634354)
chr4 (16-98)||(23067891-23067973)
chr4 (16-125)||(54420755-54420864)
chr4 (16-102)||(3673608-3673694)
chr4 (16-104)||(11817055-11817143)
chr4 (16-101)||(4622753-4622839)
chr4 (16-102)||(46728963-46729048)
chr4 (16-101)||(5388501-5388586)
chr4 (16-104)||(14542555-14542643)
chr4 (11-102)||(1645979-1646070)
chr4 (11-102)||(3169025-3169116)
chr4 (16-155)||(37869460-37869598)
chr4 (16-94)||(12519650-12519727)
chr4 (16-90)||(34115695-34115769)
chr4 (16-98)||(52555764-52555846)
chr4 (53-125)||(1657650-1657722)
chr4 (36-95)||(4959638-4959697)
chr4 (16-126)||(6408400-6408511)
chr4 (16-67)||(38434618-38434669)
chr4 (16-132)||(30416664-30416781)
chr4 (19-104)||(46775902-46775986)
chr4 (16-104)||(23926024-23926112)
chr4 (16-104)||(51646076-51646164)
chr4 (16-80)||(53903617-53903681)
chr4 (16-95)||(42972030-42972109)
chr4 (16-102)||(43156761-43156847)
chr4 (16-69)||(9549485-9549538)
chr4 (38-102)||(7242834-7242898)
chr4 (37-97)||(29577149-29577209)
chr4 (16-92)||(35338389-35338465)
chr4 (42-93)||(44375333-44375384)
chr4 (16-67)||(46716937-46716988)
chr4 (73-131)||(33289326-33289384)
chr4 (16-57)||(28990328-28990369)
chr4 (31-80)||(32188989-32189038)
chr4 (49-153)||(38546188-38546290)
chr4 (16-52)||(2945172-2945208)
[»] chr2 (37 HSPs)
chr2 (16-155)||(3602917-3603056)
chr2 (19-153)||(25237372-25237506)
chr2 (16-125)||(3390394-3390503)
chr2 (16-125)||(25771407-25771516)
chr2 (16-98)||(7640399-7640481)
chr2 (16-102)||(37883638-37883724)
chr2 (16-121)||(6089859-6089964)
chr2 (16-125)||(25516456-25516565)
chr2 (16-125)||(27191378-27191487)
chr2 (16-125)||(27841192-27841301)
chr2 (16-104)||(25623088-25623176)
chr2 (16-132)||(27024182-27024298)
chr2 (16-104)||(29812658-29812746)
chr2 (16-102)||(3464944-3465030)
chr2 (20-153)||(41841883-41842017)
chr2 (17-102)||(42105796-42105881)
chr2 (16-153)||(40125323-40125460)
chr2 (16-102)||(10589023-10589110)
chr2 (16-102)||(5930408-5930494)
chr2 (16-102)||(26491288-26491374)
chr2 (16-125)||(41176824-41176934)
chr2 (19-125)||(44167755-44167861)
chr2 (16-124)||(43566840-43566946)
chr2 (16-75)||(19953582-19953641)
chr2 (16-101)||(19581045-19581131)
chr2 (16-101)||(13268560-13268644)
chr2 (16-104)||(9715587-9715676)
chr2 (44-101)||(15674045-15674102)
chr2 (16-132)||(34479911-34480027)
chr2 (38-101)||(16880024-16880087)
chr2 (19-125)||(36507893-36507999)
chr2 (77-155)||(44951435-44951512)
chr2 (16-101)||(2251388-2251473)
chr2 (16-83)||(29734193-29734261)
chr2 (16-104)||(44441369-44441457)
chr2 (73-132)||(4878795-4878854)
chr2 (16-104)||(5071413-5071501)
[»] chr7 (36 HSPs)
chr7 (16-125)||(24470357-24470466)
chr7 (16-125)||(24475305-24475414)
chr7 (16-121)||(40775233-40775338)
chr7 (16-95)||(25855263-25855342)
chr7 (16-102)||(47749719-47749805)
chr7 (16-101)||(28015342-28015428)
chr7 (16-125)||(49166889-49166998)
chr7 (18-104)||(16263370-16263457)
chr7 (16-101)||(8611665-8611750)
chr7 (16-104)||(23732436-23732524)
chr7 (16-106)||(22751420-22751510)
chr7 (16-102)||(29804719-29804805)
chr7 (16-98)||(30992866-30992948)
chr7 (16-95)||(44681454-44681532)
chr7 (16-94)||(13008716-13008793)
chr7 (20-94)||(43807197-43807271)
chr7 (16-68)||(37399645-37399697)
chr7 (16-106)||(33530511-33530599)
chr7 (16-102)||(21329339-21329424)
chr7 (16-69)||(42490720-42490773)
chr7 (16-96)||(7985883-7985963)
chr7 (16-68)||(9933866-9933918)
chr7 (36-104)||(24045295-24045363)
chr7 (16-95)||(47156388-47156465)
chr7 (16-102)||(8319299-8319386)
chr7 (16-95)||(10250524-10250603)
chr7 (16-104)||(14734092-14734181)
chr7 (16-102)||(35141794-35141882)
chr7 (16-68)||(26017701-26017753)
chr7 (16-75)||(39090127-39090187)
chr7 (44-100)||(43483581-43483637)
chr7 (16-97)||(38649400-38649482)
chr7 (16-68)||(15124023-15124076)
chr7 (32-131)||(23177640-23177740)
chr7 (16-93)||(41748542-41748621)
chr7 (32-104)||(46918385-46918456)
[»] chr1 (35 HSPs)
chr1 (16-125)||(6212929-6213038)
chr1 (16-125)||(22344955-22345064)
chr1 (16-155)||(14717286-14717424)
chr1 (16-98)||(21326462-21326544)
chr1 (16-100)||(5832220-5832304)
chr1 (16-95)||(44562792-44562871)
chr1 (16-150)||(38646521-38646655)
chr1 (16-104)||(17579751-17579839)
chr1 (16-97)||(630828-630909)
chr1 (16-102)||(46589161-46589245)
chr1 (39-104)||(52839504-52839569)
chr1 (16-80)||(8893300-8893364)
chr1 (19-104)||(52752015-52752096)
chr1 (16-102)||(35077933-35078019)
chr1 (16-101)||(44514032-44514118)
chr1 (44-101)||(52839409-52839466)
chr1 (16-96)||(13691801-13691881)
chr1 (19-79)||(23320448-23320508)
chr1 (16-69)||(40992352-40992407)
chr1 (16-88)||(45659041-45659113)
chr1 (16-102)||(10877330-10877417)
chr1 (16-69)||(4564536-4564589)
chr1 (16-69)||(15276493-15276546)
chr1 (16-67)||(23257108-23257159)
chr1 (62-157)||(27469821-27469916)
chr1 (16-102)||(12148091-12148177)
chr1 (16-57)||(15698230-15698271)
chr1 (18-102)||(22032135-22032219)
chr1 (16-57)||(29067080-29067121)
chr1 (17-102)||(48655110-48655195)
chr1 (21-82)||(49651840-49651901)
chr1 (32-155)||(30853841-30853965)
chr1 (16-67)||(1767986-1768037)
chr1 (16-98)||(33177640-33177721)
chr1 (21-67)||(40488445-40488491)
[»] chr6 (22 HSPs)
chr6 (16-98)||(19759777-19759859)
chr6 (16-125)||(16913290-16913399)
chr6 (16-102)||(7049232-7049317)
chr6 (16-82)||(20845013-20845079)
chr6 (16-101)||(12576521-12576606)
chr6 (17-101)||(32457632-32457716)
chr6 (16-102)||(4663863-4663949)
chr6 (16-92)||(15128192-15128267)
chr6 (20-99)||(548912-548991)
chr6 (16-70)||(1944113-1944167)
chr6 (16-100)||(32804281-32804366)
chr6 (16-99)||(13234151-13234233)
chr6 (18-104)||(8644228-8644314)
chr6 (36-94)||(33194598-33194656)
chr6 (16-60)||(23843467-23843511)
chr6 (16-124)||(891551-891659)
chr6 (19-102)||(31747945-31748026)
chr6 (44-127)||(10744539-10744622)
chr6 (59-154)||(27575113-27575208)
chr6 (16-67)||(33541572-33541623)
chr6 (19-101)||(903441-903525)
chr6 (32-80)||(22530287-22530335)
[»] scaffold0045 (1 HSPs)
scaffold0045 (16-125)||(9691-9800)
[»] scaffold0011 (1 HSPs)
scaffold0011 (16-102)||(11004-11090)
[»] scaffold0157 (1 HSPs)
scaffold0157 (16-94)||(1184-1261)
[»] scaffold0340 (1 HSPs)
scaffold0340 (16-92)||(11820-11896)
[»] scaffold1294 (1 HSPs)
scaffold1294 (18-133)||(734-849)
[»] scaffold0722 (1 HSPs)
scaffold0722 (16-90)||(5569-5643)
[»] scaffold0316 (1 HSPs)
scaffold0316 (16-88)||(12246-12318)
[»] scaffold0012 (1 HSPs)
scaffold0012 (16-101)||(244620-244707)
[»] scaffold0150 (1 HSPs)
scaffold0150 (31-84)||(10383-10436)
[»] scaffold0024 (1 HSPs)
scaffold0024 (16-68)||(36548-36600)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-102)||(105037-105123)


Alignment Details
Target: chr5 (Bit Score: 476; Significance: 0; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 16 - 552
Target Start/End: Complemental strand, 41988255 - 41987723
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  41988255 atcacttatttcaacaaaagggaaagagaaaaacgagttagaggggcgattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggag 41988156  T
Q  116 aagaaactagaattttgacgatggttcacaagaaagaaagaagggaagagagactagtatggtttatcattatgtgaacttcatttatgatttatttttg 215  Q
    ||||||||||| ||||| ||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41988155 aagaaactagagttttggcgatggttcacaagaaagaa----gggaagagagactagtatggtttatcattaggtgaacttcatttatgatttatttttg 41988060  T
Q  216 ctttcattacctgtttggtgggatccattccacatgattttttcctcataagagagtggtgaaagaaaaaatgttgttgctaacttttctgttctttgat 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41988059 ctttcattacctgtttggtgggatccattccacatgattttttcctcataagagagtggtgaaagaaaaaatgttgttgctaacttttctgttctttgat 41987960  T
Q  316 ttttcgtacgtgttgtactttgtagcttttcttgccacgaatggctaaagcttgtactattcaataagataggaatatgaattatgggtcaacaataggg 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41987959 ttttcgtacgtgttgtactttgtagcttttcttgccacgaatggctaaagcttgtactattcaataagataggaatatgaattatgggtcaacaataggg 41987860  T
Q  416 ggttggtggcacctgttaaaaatgatactcatcaaaagaccaacttgaaaatctttgatttcgttgacactgacccaagcaaatgcaattaatattatga 515  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  41987859 ggttggtggcacctgttaaaaatgatactcatcaaaggaccaacttgaaaatctttgatttcgttgacactgacccaagcaaatgcaattagtattacga 41987760  T
Q  516 ctattacaaacagatttggccatcacaaataaaagtg 552  Q
    ||||||||||||||||||||| |||||||||||||||    
T  41987759 ctattacaaacagatttggccctcacaaataaaagtg 41987723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 9034987 - 9035107
Alignment:
Q  12 gaatatcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgta 111  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||  | |    
T  9034987 gaatgtcacttattttaataaaatggaaagagaaaaacgagttagagggatgattttgagtcaaaaattgatcataaatcacccctcattgatagatgaa 9035086  T
Q  112 ggagaagaaactagaattttg 132  Q
    |||||||||||||| ||||||    
T  9035087 ggagaagaaactaggattttg 9035107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 31645900 - 31645791
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| || |  | |||||    
T  31645900 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctctttaatggatgaaggag 31645801  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  31645800 aagaaactag 31645791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 34893981 - 34894098
Alignment:
Q  38 aaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttgacgat 137  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||| |  | |||||||||||||||  |||||| | |    
T  34893981 aaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccgtaaatcacccctctttgatggatgaaggagaagaaactagggttttgatgtt 34894080  T
Q  138 ggttcacaagaaagaaag 155  Q
    || |||||||| ||||||    
T  34894081 ggctcacaagagagaaag 34894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 41554558 - 41554469
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || |||||||||| ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41554558 atcacttatttcaataaaagggaaatagaaaaaacaagttagaggggtgattttggatcaaaaattgatcctaaatcacccctctttgat 41554469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 6887221 - 6887337
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||  | ||||||||| ||||||||||||||||||||| |  | |||||    
T  6887221 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggttaaaaattgaccctaaatcacccctctttgatggatgaaggag 6887320  T
Q  116 aagaaactagaattttg 132  Q
    ||||||||||| |||||    
T  6887321 aagaaactagagttttg 6887337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 15710613 - 15710491
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaat--caaaaattgatcctaaatcacccctctttgataggcgtagg 113  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||   ||||||||| | |||||||||| |||||||| |  | |||    
T  15710613 atcacttatttcaataaaagggaaagagaaaaacgagttagaggggtgattttggataaaaaaaattgaccataaatcacccatctttgatggatgaagg 15710514  T
Q  114 agaagaaactagaattttgacga 136  Q
    | ||||||||||| |||||||||    
T  15710513 aaaagaaactagagttttgacga 15710491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 28618675 - 28618589
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||  | ||||||||| | |||||||||||||||||    
T  28618675 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggttaaaaattgaccttaaatcacccctctttg 28618589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 29310392 - 29310476
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctt 100  Q
    ||||||||||| || ||||||||||   |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  29310392 atcacttatttcaataaaagggaaaagaaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctctt 29310476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 563 - 635
Target Start/End: Complemental strand, 41987679 - 41987611
Alignment:
Q  563 aaaatttgtcacttatatcgtgaagcaaatacttgtgttcatgcttaatttagctaatagggaatgtgattct 635  Q
    |||||||||||||||||||||||||||||||||| |||||||||    |||||||||||||||||||||||||    
T  41987679 aaaatttgtcacttatatcgtgaagcaaatacttatgttcatgc----tttagctaatagggaatgtgattct 41987611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 2415471 - 2415383
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || |||||||||| |||||||| ||||||| |||||||||||  ||||||||||| |||||||||||  ||||||||    
T  2415471 atcacttatttcaataaaagggaaaaagaaaaacaagttagaagggtgattttgggtcaaaaattgaccctaaatcacctatctttgat 2415383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 6647956 - 6648044
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||  |||||| |||| | |||||| ||||||||||||    
T  6647956 atcacttatttcaataaaagggaaagcgaaaaacgagttagaggagtgattttgggtcaaaatttgaccataaatcgcccctctttgat 6648044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 41358107 - 41357972
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttaga-ggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaa 117  Q
    |||||||| || |||||| |||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||||  ||||||||    | |||| ||    
T  41358107 acttatttcaataaaaggaaaagagaaaaacgagttagagggggtgattttgggtcaaaaattgaccctaaatcacctatctttgatctatgaaggaaaa 41358008  T
Q  118 gaaactagaattttgacgatggttcacaagaaagaa 153  Q
    ||||||||| |||||  | ||| |||||||| ||||    
T  41358007 gaaactagagttttggtggtggctcacaagagagaa 41357972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 19646084 - 19646170
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||||||||||  ||||| ||||| | |||| ||||||||||||    
T  19646084 atcacttatttcattaaaagggaaagagaaaaatgagttagaggggtgattttgggtcaaacattgaccttaaaccacccctctttg 19646170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 33486612 - 33486698
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || |||||||||| ||||||| | ||||||| |||||||||||  ||||||||||| ||||||||||||||||||    
T  33486612 atcacttatttcaataaaagggaaatagaaaaaacaagttagatgggtgattttgggtcaaaaattgaccctaaatcacccctcttt 33486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 4070625 - 4070540
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||| ||||| |||||||||||| |||||||||||||||  ||||||| ||| |||||||||||||| ||||    
T  4070625 atcacttatttcaataaaaaggaaatagaaaaacgagtcagaggggtgattttgggtcaaaaa-tgaccctaaatcacccctttttg 4070540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 4726971 - 4727053
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||||||||| |||||||||||||| | || ||||||||  ||||||||||| ||||||| |||||||    
T  4726971 atcacttatttcaataaaagggaaatagaaaaacgagttatatggatgattttgggtcaaaaattgaccctaaattacccctc 4727053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 41063439 - 41063553
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    |||| |||||| || |||| |||||||||||||||||||||| | |||||||||| ||||||||||| |||  |||| ||||||||||| |  | |||||    
T  41063439 atcatttatttcaataaaatggaaagagaaaaacgagttagatgagtgattttgagtcaaaaattgaccct-gatca-ccctctttgatggatgaaggag 41063536  T
Q  116 aagaaactagaattttg 132  Q
    |||||| ||| ||||||    
T  41063537 aagaaattaggattttg 41063553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 5378373 - 5378322
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt 67  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  5378373 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattt 5378322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 34873931 - 34873849
Alignment:
Q  17 tcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt-gaatcaaaaattgatcctaaatcacccctc 98  Q
    |||||||||| || ||||||||||  ||||||||||||||| |||||||||| ||   ||||||||| |||||||||||||||    
T  34873931 tcacttatttcaataaaagggaaactgaaaaacgagttagaagggtgattttcgataaaaaaattgaccctaaatcacccctc 34873849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 37425067 - 37424978
Alignment:
Q  16 atcacttattttaacaaaagggaaagaga---aaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| | |   ||||||||||||||| |||||||||  ||| ||||||| | |||||||||||||||||    
T  37425067 atcacttatttcaataaaagggaaatatatataaaacgagttagaggcgtgattttgggtcagaaattgaccataaatcacccctctttg 37424978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 29154325 - 29154264
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaa 78  Q
    ||||||||||| || ||||| |||||| |||||| |||||||||||||||||||| |||||||    
T  29154325 atcacttatttcaataaaagagaaaga-aaaaacaagttagaggggtgattttgagtcaaaaa 29154264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 18472767 - 18472843
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatc 91  Q
    ||||||||||  || |||||| ||| ||||||| | |||||||||||||||||||  ||||||||||| ||||||||    
T  18472767 atcacttattgcaataaaaggaaaatagaaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatc 18472843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 28500788 - 28500736
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt 68  Q
    ||||||||||| || |||||||||||||||||| |||||| ||| ||||||||    
T  28500788 atcacttatttcaataaaagggaaagagaaaaaagagttaaaggagtgatttt 28500736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 40565198 - 40565284
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || | || |||| ||||||||||| |||||| |||||||| |  ||||||||  | |||||| ||||||||||||    
T  40565198 atcacttatttaaatagaaaggaaggagaaaaacgatttagagaggtgatttggggtcaaaaatcaaccctaaaccacccctctttg 40565284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 32390690 - 32390731
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttaga 57  Q
    ||||||||||| || |||| ||||||||||||||||||||||    
T  32390690 atcacttatttcaataaaaaggaaagagaaaaacgagttaga 32390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 6074779 - 6074823
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggg 60  Q
    ||||||||||| || ||||||||| ||||||||||| ||||||||    
T  6074779 atcacttatttaaataaaagggaaggagaaaaacgatttagaggg 6074823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 13079209 - 13079173
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgag 52  Q
    ||||||||||| || ||||||||||||||||||||||    
T  13079209 atcacttatttcaataaaagggaaagagaaaaacgag 13079173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 456; Significance: 0; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 16 - 552
Target Start/End: Original strand, 1220258 - 1220790
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  1220258 atcacttatttcaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggag 1220357  T
Q  116 aagaaactagaattttgacgatggttcacaagaaagaaagaagggaagagagactagtatggtttatcattatgtgaacttcatttatgatttatttttg 215  Q
    |||||| |||| |||||||||||||||||||||    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  1220358 aagaaattagagttttgacgatggttcacaaga----aagaagggaagagagactagtatggtttatcattcgatgaacttcatttatgatttatttttg 1220453  T
Q  216 ctttcattacctgtttggtgggatccattccacatgattttttcctcataagagagtggtgaaagaaaaaatgttgttgctaacttttctgttctttgat 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1220454 ctttcattacctgtttggtgggatccattccacatgattttttcctcataagagagtggtgaaagaaaaaatgttgttgctaacttttctgttctttgat 1220553  T
Q  316 ttttcgtacgtgttgtactttgtagcttttcttgccacgaatggctaaagcttgtactattcaataagataggaatatgaattatgggtcaacaataggg 415  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1220554 ttttcatatgtgttgtactttgtagctattcttgccacgaatggctaaagcttgtactattcaataagataggaatatgaattatgggtcaacaataagg 1220653  T
Q  416 ggttggtggcacctgttaaaaatgatactcatcaaaagaccaacttgaaaatctttgatttcgttgacactgacccaagcaaatgcaattaatattatga 515  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  1220654 ggttggtggcacctgttaaaaatgatactcatcaaaggaccaacttgaaaatctttgatttcgttgacactgacccaagcaaatgcaattagtattacga 1220753  T
Q  516 ctattacaaacagatttggccatcacaaataaaagtg 552  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1220754 ctattacaaacaaatttggccatcacaaataaaagtg 1220790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 1165439 - 1165548
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |  | |||||    
T  1165439 atcacttatttcaataaaagggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggag 1165538  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  1165539 aagaaactag 1165548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 20201101 - 20201210
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |  | |||||    
T  20201101 atcacttatttcaataaaagtgaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggag 20201200  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  20201201 aagaaactag 20201210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 20203283 - 20203392
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |  | |||||    
T  20203283 atcacttatttcaataaaagtgaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggag 20203382  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  20203383 aagaaactag 20203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 43029754 - 43029645
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |  | |||||    
T  43029754 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaaatgatcctaaatcacccctctttgatggatgaaggag 43029655  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  43029654 aagaaactag 43029645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 50519861 - 50519752
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||| | |  | |||||    
T  50519861 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggag 50519762  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  50519761 aagaaactag 50519752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 41882451 - 41882560
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || | |||||||| ||||||||||||||||||||| ||||||  ||||||||||| |||||||||| |||||||||| |  | |||||    
T  41882451 atcacttatttcaatacaagggaaatagaaaaacgagttagaggggtaattttgggtcaaaaattgaccctaaatcactcctctttgatggatgaaggag 41882550  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  41882551 aagaaactag 41882560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 21803601 - 21803462
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||| ||| || ||||| |||||||||||||||||||||||||||||||||  |||||||||||  || |||||| |||||||| |||  | |||||    
T  21803601 atcacttgtttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacactgaatcactcctctttggtagatgaaggag 21803502  T
Q  116 aagaaactagaattttgacgatggttcacaagaaagaaag 155  Q
    ||||||||||  |||||  || || |||||||| ||||||    
T  21803501 aagaaactagggttttggtgacggctcacaagagagaaag 21803462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 563 - 635
Target Start/End: Original strand, 1220834 - 1220902
Alignment:
Q  563 aaaatttgtcacttatatcgtgaagcaaatacttgtgttcatgcttaatttagctaatagggaatgtgattct 635  Q
    |||||||||||||||||| |||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  1220834 aaaatttgtcacttatatggtgaagcaaatacttgtgttcatgc----tttagctaatagggaatgtgattct 1220902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 35501817 - 35501915
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattt 130  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||| ||||||||| | |  | ||||||||||||||| ||||    
T  35501817 aaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattaaccctaaatca-ccctctttggtggatgaaggagaagaaactaggattt 35501915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22286795 - 22286901
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaag 118  Q
    |||||||| || |||||| ||| ||||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||||| | |  | ||||||||    
T  22286795 acttatttcaataaaaggaaaatagaaaaacgagttagaggggtaattttaggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaag 22286894  T
Q  119 aaactag 125  Q
    |||||||    
T  22286895 aaactag 22286901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 25374113 - 25374199
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||||||   ||||||||| | |||||||||||| ||||||    
T  25374113 atcacttatttcaagaaaaggaaaagagaaaaacgagttagaggggtgattttaggtcaaaaattaaccctaaatcacccttctttg 25374199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 4019651 - 4019583
Alignment:
Q  37 gaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgatag 106  Q
    |||||||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||    
T  4019651 gaaagagaaaaacgagttagagaggtgattttgagtc-aaaattgaccctaaatcacccctctttgatag 4019583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 45664285 - 45664217
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctct 99  Q
    ||||| |||| ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  45664285 aaaagagaaatagaaaaacgagttagaggggtgattttgggtcaaaatttgatcctaaatcacccctct 45664217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 40462044 - 40462124
Alignment:
Q  22 tattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||  |||||| ||||  |||||||||| |||||||    
T  40462044 tatttcaataaaagggaaagagaaaaacaagttagaggggtgattttgggtcaaaatttgactctaaatcaccactctttg 40462124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 1806506 - 1806589
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||| || | || |||| ||||||||||| ||||||||||||||| | |||||||||||| |||||| ||||||||||||    
T  1806506 acttatttaaatagaatggaaggagaaaaacgatttagaggggtgatttgggatcaaaaattgaccctaaaccacccctctttg 1806589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 20251723 - 20251636
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaat-caaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| ||  |||||||||||||||||||||||||| |||||||||||  |  |||||| || |||||||||||||||||||    
T  20251723 atcacttatttcaatcaaagggaaagagaaaaacgagttagaagggtgattttgggtaaaaaaatcgaccctaaatcacccctctttg 20251636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 53426854 - 53426787
Alignment:
Q  37 gaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    |||||||||||||||||||||||||||||||||  | ||||||||| ||||||||| || ||||||||    
T  53426854 gaaagagaaaaacgagttagaggggtgattttgcgtaaaaaattgaccctaaatcatccatctttgat 53426787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 14741368 - 14741421
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  14741368 atcacttatttcaataaaagggaaagagaaaaacgagttagagaggtgattttg 14741421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 29182651 - 29182704
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  29182651 atcacttatttcaataaaagggaaagagaaaaacgagttagagggatgattttg 29182704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 43839561 - 43839644
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || ||||||||||||||||| ||||||||| |||||| ||||  ||||||||||| |||||||||||| |||||    
T  43839561 atcacttatttcaataaaagggaaagagaaaagcgagttaga-gggtgactttg-gtcaaaaattgaccctaaatcacccatcttt 43839644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 33076383 - 33076307
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatca 92  Q
    ||||||||||| || |||||| |||||| |||| |||||||||||||||||||| ||||||| || | |||||||||    
T  33076383 atcacttatttcaataaaaggaaaagaggaaaatgagttagaggggtgattttggatcaaaagttaaccctaaatca 33076307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 22844091 - 22843988
Alignment:
Q  47 aacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttgacgatggttcacaa 146  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||| |||||||||||    | ||||||| |||||||  |||||  || |||||||||    
T  22844091 aacgagttagaggggtgattttgggtcaaaaattgaccttaaatcagccctctttgatgaatgaaggagaataaactagggttttggtgacggttcacaa 22843992  T
Q  147 gaaa 150  Q
    ||||    
T  22843991 gaaa 22843988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 42106183 - 42106096
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgag-ttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| |||||||  || ||||| ||||||||||   ||||||||||| |||||||||||||||||||    
T  42106183 atcacttatttcaataaaagggaaatagaaaaaacaggttagatgggtgattttaggtcaaaaattgaccctaaatcacccctctttg 42106096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 29776747 - 29776785
Alignment:
Q  32 aaagggaaagagaaaaacgagttagaggggtgattttga 70  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29776747 aaagggaaagagaaaaacgagttagaggggtgattttga 29776785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 37051695 - 37051609
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||| || || | ||||||| ||||||||||| ||||||||||||||  |  ||||||||||| ||||||||| |||||||||    
T  37051695 atcacttacttaaatagaagggaaggagaaaaacgatttagaggggtgattcagggtcaaaaattgaccctaaatcatccctctttg 37051609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 43242880 - 43242794
Alignment:
Q  18 cacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||| |  |||||||| |||||||||||||||| | |||||||||||  ||||||| ||| |||||||||||| | ||||||    
T  43242880 cacttatttcagtaaaagggacagagaaaaacgagttaaatgggtgattttgtgtcaaaaactgaccctaaatcacccttatttgat 43242794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 34767050 - 34766998
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  34767050 atcacttatttcaataaaagggaaagagaaaaacgagttaga-gggtgattttg 34766998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 3088705 - 3088758
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || |||||| ||| |||||||||| |||||||||||||||||    
T  3088705 atcacttatttcaataaaaggaaaatagaaaaacgaattagaggggtgattttg 3088758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 50460263 - 50460177
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || ||||| |||||||||||||||| |  | ||||||||||   ||||||||||| | ||||||| |||||||||||    
T  50460263 atcacttatttcaataaaagagaaagagaaaaacgaggt--atgggtgattttatgtcaaaaattgaccttaaatcatccctctttgat 50460177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 40797104 - 40797018
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||| |||||| || |||||||||| ||||||| | |||||||||||||||||||  || |||||| | |||||||||||||| ||||    
T  40797104 atcatttatttcaataaaagggaaatagaaaaaacaagttagaggggtgattttggctc-aaaattaaccctaaatcacccctttttg 40797018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 39340270 - 39340216
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttga 70  Q
    ||||||||||| || |||| | |||||||||||| |||||||||| |||||||||    
T  39340270 atcacttatttcaataaaaagaaaagagaaaaacaagttagagggatgattttga 39340216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 913359 - 913447
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa--cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| |||||||  |  ||||||||||||||||||  |||||||||||   | ||| |||||||||||    
T  913359 atcacttatttcaaaaaaagggaaatagaaaaaaacatgttagaggggtgattttgggtcaaaaattgactatgaattacccctctttg 913447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 11846671 - 11846602
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctt 100  Q
    |||| |||||||||||||| ||||||| ||||||||||   ||||||||| | |||| ||||| ||||||    
T  11846671 aaaatggaaagagaaaaacaagttagacgggtgattttcgctcaaaaattaaccctatatcactcctctt 11846602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 26412399 - 26412342
Alignment:
Q  20 cttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaa 77  Q
    ||||||| || |||||||| |||||||||||| ||||||  |||||||||| ||||||    
T  26412399 cttatttcaataaaagggagagagaaaaacgacttagagatgtgattttgagtcaaaa 26412342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 33070225 - 33070152
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaa 89  Q
    |||| |||||| || |||| |||| ||||||||||| ||||||||||||||| |  | ||||||||| ||||||    
T  33070225 atcatttatttaaataaaaaggaatgagaaaaacgatttagaggggtgatttggggttaaaaattgaccctaaa 33070152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 47914636 - 47914687
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt 68  Q
    ||||||| ||| || |||| ||||||| |||||||||||||||||||||||||    
T  47914636 atcacttttttcaataaaatggaaaga-aaaaacgagttagaggggtgatttt 47914687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 9270092 - 9269977
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| | |  | |||||    
T  9270092 atcacttatttcaataaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgatcataaatcacccctctttggtggatgaaggag 9269993  T
Q  116 aagaaactagaatttt 131  Q
    ||||||||||| ||||    
T  9269992 aagaaactagagtttt 9269977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 31874155 - 31874046
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  |||||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||| |  | |||||    
T  31874155 atcacttatttcaataaaagggaaaaggaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggag 31874056  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  31874055 aagaaactag 31874046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 9992736 - 9992656
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccc 96  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  9992736 atcacttatttcaataaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccc 9992656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 16937382 - 16937468
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| |  |||||||||| |||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  16937382 atcacttatttaagtaaaagggaaatagaaaaacaagttagagggatgattttggatcaaaaattgaccctaaatcacccctctttg 16937468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 36545824 - 36545938
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| |||  ||| ||||||| | ||||||| ||||||||| | |  | |||||    
T  36545824 atcacttatttcaataaaagggaaagagaaaaacgagttagaggggtgatattgggtcacaaattgaccttaaatcatccctctttggtggatgaaggag 36545923  T
Q  116 aagaaactagaattt 130  Q
    |||||||||| ||||    
T  36545924 aagaaactaggattt 36545938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 15665607 - 15665524
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||| || ||||| ||||||||||||| |||||||||||||||||||  |||||| |||| |||||||||||||||||||    
T  15665607 acttatttcaataaaagtgaaagagaaaaacaagttagaggggtgattttgtgtcaaaagttgaccctaaatcacccctctttg 15665524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 37659037 - 37658951
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| | |||||| | |||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  37659037 atcacttatttcaataaaagggaaatataaaaacaaattagaggggtgattttgtgtcaaaaattgaccctaaatcacccctctttg 37658951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 26937593 - 26937510
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||| || |||||||||| || |||||||||||||||||||||||||| |||||| || | ||||||| |||||||||||    
T  26937593 acttatttcaataaaagggaaaaaggaaaacgagttagaggggtgattttgagtcaaaacttaaccctaaataacccctctttg 26937510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 8054851 - 8054933
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || | |||||||| ||||||||||||||||||| | ||||||  ||||||||||| |||||||||||||||    
T  8054851 atcacttatttcaatataagggaaatagaaaaacgagttagagggataattttgggtcaaaaattgaccctaaatcacccctc 8054933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 13864430 - 13864321
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| | |||||||||||| |  ||||||||||  |||||| |||| | ||||||||||||||||||||   | |||||    
T  13864430 atcacttatttcaataaaagggaaataaaaaaacgagttacataggtgattttggctcaaaagttgaccttaaatcacccctctttgataaatgaaggag 13864331  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  13864330 aagaaactag 13864321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 14530951 - 14531039
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || | ||| ||| ||||||||||| ||||| ||||||||| || ||||||||||| |||||| ||||||||||||||    
T  14530951 atcacttatttaaatagaagagaaggagaaaaacgatttagaagggtgatttggagtcaaaaattgaccctaaaccacccctctttgat 14531039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 15237680 - 15237756
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatca 92  Q
    |||||||| || || ||||||||||||||||||||||||||| ||||||||| || | ||||||||| |||||||||    
T  15237680 atcacttacttcaataaaagggaaagagaaaaacgagttagatgggtgatttagagttaaaaattgaccctaaatca 15237756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 16938314 - 16938406
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt-tgaatcaaaaattgatcctaaatcacccctctttgatagg 107  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||  |||||| ||    ||||||||| ||||||||||||||||||||||||    
T  16938314 atcacttatttcaacaaaagggaaagagaaaaacaagttaaaggaatgatttatggtaaaaaaattgaccctaaatcacccctctttgatagg 16938406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 44295387 - 44295299
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || |||| |||||  ||||||| |||||||| | ||||||||  ||||||||||| |||||||||||||||||||||    
T  44295387 atcacttatttcaataaaaaggaaaaggaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctctttgat 44295299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 32256764 - 32256851
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaat-caaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| | |||||| |||||||||||||||||||  |  ||||||||| |||||||||||||||||||    
T  32256764 atcacttatttcaataaaagggaaataaaaaaacaagttagaggggtgattttgggtaaaaaaattgaccctaaatcacccctctttg 32256851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 10042804 - 10042746
Alignment:
Q  44 aaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||    
T  10042804 aaaaacgagttagaggggtgattttgggtcaaaaattgaccataaatcacccctctttg 10042746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 5989701 - 5989624
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcac 93  Q
    ||||||||||| |  ||||||||||||||||||||||||||||  |||||||||  | ||||||||| ||||||||||    
T  5989701 atcacttatttcataaaaagggaaagagaaaaacgagttagagatgtgattttgggttaaaaattgaccctaaatcac 5989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 284518 - 284603
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||| ||||| ||||||||  || ||||||||||||||| || ||| ||||||  ||||||||||||| ||||||||| ||||||    
T  284518 atcacatatttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacctctcttt 284603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 631359 - 631274
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||| ||||| ||||||||  || ||||||||||||||| || ||| ||||||  ||||||||||||| ||||||||| ||||||    
T  631359 atcacatatttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacctctcttt 631274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 817171 - 817086
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||| ||||| ||||||||  || ||||||||||||||| || ||| ||||||  ||||||||||||| ||||||||| ||||||    
T  817171 atcacatatttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatcacctctcttt 817086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 11655948 - 11656037
Alignment:
Q  11 agaatatcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctt 100  Q
    |||| |||||||||||  | |||| |||| |||||||||||||| || | ||||||| |  |||||||||||||||||||||||| ||||    
T  11655948 agaaaatcacttatttcgataaaaaggaacgagaaaaacgagttggaagagtgatttcgggtcaaaaattgatcctaaatcacccatctt 11656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 14919438 - 14919523
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttag-aggggtgattttgaatcaaaaattgatcctaaatcacccctctttgatag 106  Q
    |||||||||||||||||||||||| ||||||||||| | ||| ||||||||| |||  ||||| | |||||||||| ||||||||||||    
T  14919438 acttattttaacaaaagggaaaga-aaaaacgagtttgaaggagtgattttggatc--aaattaaccctaaatcactcctctttgatag 14919523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 27534442 - 27534527
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || |||| |||| ||||||||| |  |||||||  ||||| | |||||||||||| ||||||||||||||||||    
T  27534442 atcacttatttaaataaaaaggaaggagaaaaacaatgtagagggacgatttgggatcaaaaattgaccctaaatcacccctcttt 27534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 32412861 - 32412797
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattg 81  Q
    ||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||| |||||||||||    
T  32412861 atcacttatttcaataaaagggaaagggaaaa-cgagtgagaggggtgattttggatcaaaaattg 32412797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 12244259 - 12244398
Alignment:
Q  16 atcacttattttaacaaaagggaaa-gagaaaaacgagttagaggggtgattttgaatcaaaaa-ttgatcctaaatcacccctctttgataggcgtagg 113  Q
    ||||||||| | ||||||||||||| ||  ||||||||||| ||| ||||||||| || ||||| |||| || ||||||||| || || ||||  | |||    
T  12244259 atcacttatatcaacaaaagggaaaagatgaaaacgagttaaaggagtgattttggataaaaaaattgacccaaaatcacccttcattaatagatgaagg 12244358  T
Q  114 agaagaaactagaattttgacgatggttcacaagaaagaa 153  Q
    |||||||||||  ||||||| || || |||||||| ||||    
T  12244359 agaagaaactaagattttgatgacggctcacaagagagaa 12244398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 32061865 - 32061779
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || ||| ||||| |||| |||||| ||||| ||||||||| |  ||||||||||| ||||||  |||||||||||    
T  32061865 atcacttatttaaataaaggggaaggagagaaacgatttagaagggtgatttggggtcaaaaattgaccctaaactacccctctttg 32061779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 32920723 - 32920637
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||| |||| ||||||||||| |||||| |||||||| |   |||| ||||| |||||| ||||||||||||    
T  32920723 atcacttatttaaataaaaaggaaggagaaaaacgatttagagcggtgatttaggggcaaagattgaccctaaaccacccctctttg 32920637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 17019160 - 17019107
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatc 84  Q
    ||||||||||||||||||| | ||||| |||||||||||  |||||||||||||    
T  17019160 aaaagggaaagagaaaaacaatttagaagggtgattttgggtcaaaaattgatc 17019107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 17549597 - 17549544
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatc 84  Q
    ||||||||||||||||||| | ||||| |||||||||||  |||||||||||||    
T  17549597 aaaagggaaagagaaaaacaatttagaagggtgattttgggtcaaaaattgatc 17549544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 16808948 - 16808889
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaa 76  Q
    ||||||||||| || |||||| ||||||||||| |||||||| ||||||||||| ||||||    
T  16808948 atcacttatttcaataaaagg-aaagagaaaaatgagttagatgggtgattttggatcaaa 16808889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 23766811 - 23766698
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    |||||||||||||| |||| | ||| |||||||||||||  | |||||||||||  ||||||||||| | ||||||||  ||||||| | |  | || ||    
T  23766811 atcacttattttaataaaatgaaaatagaaaaacgagtt--atgggtgattttgggtcaaaaattgaccttaaatcacatctctttggtggatgaagtag 23766714  T
Q  116 aagaaactagaatttt 131  Q
    ||||||||||| ||||    
T  23766713 aagaaactagagtttt 23766698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 18190887 - 18190966
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||| || | ||||||| || |||||||| |||||  |||||||| || ||||||||||| |||||| |||||    
T  18190887 atcacttatttaaatagaagggaaggataaaaacgatttagattggtgatttggagtcaaaaattgaccctaaaccaccc 18190966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 31713135 - 31713194
Alignment:
Q  73 caaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttg 132  Q
    ||||| |||| ||||||||||||||||||||| || | ||| |||||||||||| |||||    
T  31713135 caaaagttgaccctaaatcacccctctttgatgggtgaaggtgaagaaactagagttttg 31713194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 14327550 - 14327464
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||| ||||  ||||||||||  | ||||||||| || |  ||||||||||| |||||| ||||||||||||    
T  14327550 atcacttatttaaataaaatggaagaagaaaaacgatatggaggggtgaattggggtcaaaaattgaccctaaaccacccctctttg 14327464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 2628984 - 2628932
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || |||||||||| |||||| ||||||||| |||||||||||    
T  2628984 atcacttatttcaataaaagggaaatagaaaa-cgagttagatgggtgattttg 2628932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 3028147 - 3028070
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcac 93  Q
    ||||||||||| || |||||  |||||||||||| || | |||  ||||||||||| |||||||||||| | ||||||    
T  3028147 atcacttatttcaataaaagataaagagaaaaacaagctcgagaagtgattttgaaacaaaaattgatcatgaatcac 3028070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3680994 - 3680906
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaat--caaaaattgatcctaaatcacccctctttg 102  Q
    |||| |||||| || |||||| |||||||||||| ||||||||  |||||||||  |   |||||||||  ||||||||||||||||||    
T  3680994 atcatttatttcaataaaaggaaaagagaaaaacaagttagagaagtgattttgggtgaaaaaaattgactctaaatcacccctctttg 3680906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 5328038 - 5327989
Alignment:
Q  16 atcacttatttt-aacaaaagggaaagagaaaaacgagttagaggggtga 64  Q
    |||||||||||| || || ||||||||||||||| |||||||||||||||    
T  5328038 atcacttattttcaataatagggaaagagaaaaatgagttagaggggtga 5327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 7269527 - 7269596
Alignment:
Q  36 ggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgata 105  Q
    ||||||| |||| ||||||||| ||||||||| |  |||||||||||  |||||||||| || |||||||    
T  7269527 ggaaagaaaaaagcgagttagaagggtgatttagggtcaaaaattgactctaaatcacctctatttgata 7269596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 16996930 - 16996982
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || |||||| ||| |||||| |||||||||||||||||||||    
T  16996930 atcacttatttcaataaaaggaaaatagaaaa-cgagttagaggggtgattttg 16996982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 1215382 - 1215470
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || ||||| ||| |||||||| || |||||| |||||||| |  ||||||||||  |||||  |||| |||||||||    
T  1215382 atcacttatttaaataaaagagaaggagaaaaatgatttagagcggtgatttggggtcaaaaattggccctaatccaccgctctttgat 1215470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 5917790 - 5917866
Alignment:
Q  22 tattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||  |||||||||||||||| |||| ||||||||||||||||  ||  |||||||  | |||||||||||||||    
T  5917790 tattttaattaaagggaaagagaaaa-cgagctagaggggtgattttgggtc--aaattgactcaaaatcacccctcttt 5917866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 6833551 - 6833471
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtga-ttttgaatcaaaaattgatcctaaatcacc 94  Q
    |||||||||||||  ||||   ||||||||||| | |||||||||||||| |||||  ||||||||| |||||||||||||    
T  6833551 atcacttattttattaaaataaaaagagaaaaaaccagttagaggggtgatttttgggtcaaaaattaatcctaaatcacc 6833471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 31147844 - 31147931
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||| | || ||||||||| |||||||||||| |||| | |  ||||||  ||||||||||| ||||||||| || ||||||||    
T  31147844 atcacttatgtcaataaaagggaacgagaaaaacgag-tagatgagcaattttgggtcaaaaattgaccctaaatcatccttctttgat 31147931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 41996616 - 41996568
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtga 64  Q
    ||||||||||| || |||||||||| | |||||||||||||||| ||||    
T  41996616 atcacttatttcaataaaagggaaatacaaaaacgagttagaggtgtga 41996568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 8e-29; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 9661924 - 9661815
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |  | |||||    
T  9661924 atcacttatttcaataaaagggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggag 9661825  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  9661824 aagaaactag 9661815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 16991943 - 16991834
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||||||||||| |||||||||||  ||||||||||| ||||||||||| ||||||||| |  | |||||    
T  16991943 atcacttatttcaataaaagggaaatagaaaaacgagttagatgggtgattttgggtcaaaaattgaccctaaatcaccgctctttgatggatgaaggag 16991844  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  16991843 aagaaactag 16991834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 28588617 - 28588516
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattt 130  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||| |||| |  | ||||||||||||||| ||||    
T  28588617 aaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccttctatgatggatgaaggagaagaaactaggattt 28588518  T
Q  131 tg 132  Q
    ||    
T  28588517 tg 28588516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 41486642 - 41486558
Alignment:
Q  20 cttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  41486642 cttatttcaatataagggaaagagaaaaacgagttagaggggtgattttggatcaaaaattgaccctaaataacccctctttgat 41486558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 4634354 - 4634245
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||  ||||||||||| | ||||||||||||||||||| |  | |||||    
T  4634354 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggag 4634255  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  4634254 aagaaactag 4634245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 23067891 - 23067973
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||    
T  23067891 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctc 23067973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 54420755 - 54420864
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||| ||| |||||||||||||||||| |||||||||  ||||||||||| |||||||||||| |||||| | |  | |||||    
T  54420755 atcacttatttcaataaaaggaaaatagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggag 54420854  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  54420855 aagaaactag 54420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3673694 - 3673608
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||| |||| ||||||||||| ||||||||||||||| |  ||||||||||| |||||||||||||||||||    
T  3673694 atcacttatttaaataaaaaggaaggagaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaatcacccctctttg 3673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 11817143 - 11817055
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| |||||||||||| |||||||||||  ||||||||||||||||  |||||| || | |||||| ||||||||||||||    
T  11817143 atcacttatttaaacaaaagggaaggagaaaaacgatgtagaggggtgattttgggtcaaaacttaaccctaaaccacccctctttgat 11817055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 4622753 - 4622839
Alignment:
Q  16 atcacttattttaacaa-aagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    |||||||||||||| || || ||||||||||||||||| || || |||||||||| |||||||||||| | ||||||||||||||||    
T  4622753 atcacttattttaataagaaaggaaagagaaaaacgagatacagaggtgattttggatcaaaaattgaccttaaatcacccctcttt 4622839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 46728963 - 46729048
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| |||||||| | |||||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  46728963 atcacttatttcaataaaagggaaatagaaaaacaaattagaggg-tgattttgggtcaaaaattgaccctaaatcacccctctttg 46729048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 5388586 - 5388501
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || || |||||| ||||||||||| |||||||||||||||    ||||||||||| ||||||||||||||||||    
T  5388586 atcacttatttaaataagagggaaggagaaaaacgatttagaggggtgatttgagttcaaaaattgaccctaaatcacccctcttt 5388501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 14542555 - 14542643
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || |||| |||||  ||||||| |||||||| | ||||||||  ||||||||||| |||||||||||||||||||||    
T  14542555 atcacttatttcaataaaaaggaaaaggaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctctttgat 14542643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 1645979 - 1646070
Alignment:
Q  11 agaatatcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||| |||| |||||| || ||||| |||||||||||||||||||||||||||||||||  |||| |||| | ||||||||| | |||||||    
T  1645979 agaaaatcatttatttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaacaattaaccctaaatcatctctctttg 1646070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 3169116 - 3169025
Alignment:
Q  11 agaatatcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||| |||| |||||| || ||||| |||||| ||||||||||||||||||||||||||  |||| ||||||  |||||||||| |||||||    
T  3169116 agaaaatcatttatttcaataaaagagaaagaaaaaaacgagttagaggggtgattttgggtcaataattgactctaaatcacctctctttg 3169025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 37869460 - 37869598
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||||| ||||||||||||||||| ||||||||  | || |||||| ||||||||||  |||||| || |  | |||||    
T  37869460 atcacttatttcaataaaagggaaagataaaaacgagttagagggatgattttg-gtaaacaattgaccctaaatcacatctctttaatggatgaaggag 37869558  T
Q  116 aagaaactagaattttgacgatggttcacaagaaagaaag 155  Q
    ||||||||||  |||||  || || |||||||| ||||||    
T  37869559 aagaaactagggttttggtgacggctcacaagagagaaag 37869598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 12519727 - 12519650
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacc 94  Q
    ||||||||||| || ||||||||||||||||||||||||||| |  ||||||||| || |||||||||| |||||||||    
T  12519727 atcacttatttcaataaaagggaaagagaaaaacgagttagatgattgattttgagtc-aaaattgatcataaatcacc 12519650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 34115695 - 34115769
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaat 90  Q
    ||||||| ||| || |||||||||||||||||||||  ||||||||||||||||  ||||||||||| |||||||    
T  34115695 atcacttctttcaataaaagggaaagagaaaaacgaactagaggggtgattttgggtcaaaaattgaccctaaat 34115769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 52555764 - 52555846
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||||  ||| ||||||||||||||||| ||||||||||  ||||||||||  |||||||||||||||    
T  52555764 atcacttatttcaataaaagataaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 52555846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 1657650 - 1657722
Alignment:
Q  53 ttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactag 125  Q
    |||||||||||||||||  ||||||||||| ||||||||||| ||||||||| |  | |||||||||||||||    
T  1657650 ttagaggggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggagaagaaactag 1657722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 4959638 - 4959697
Alignment:
Q  36 ggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||||| ||||||||| | |||||||| |||||||||||| ||||||||||||    
T  4959638 ggaaagagaaaaatgagttagagtgatgattttggatcaaaaattgaccctaaatcaccc 4959697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 6408511 - 6408400
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacc-cctctttgataggcgtagga 114  Q
    |||| |||||| ||||||||||||| | |||||||||||| || ||||||||||  | ||||||||| ||| ||||||| |||||||| | |  | ||||    
T  6408511 atcaattatttcaacaaaagggaaatataaaaacgagttaaagaggtgattttgggtaaaaaattgacccttaatcacctcctctttggtggatgaagga 6408412  T
Q  115 gaagaaactaga 126  Q
    ||||||||||||    
T  6408411 gaagaaactaga 6408400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 38434669 - 38434618
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt 67  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  38434669 atcacttattttaataaaagagaaatagaaaaacgagttagaggggtgattt 38434618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 30416664 - 30416781
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtagga 114  Q
    ||||||||||| || |||||||||| ||||||| | ||||||||| |||||||||  ||||||||||| | ||||| |||||| |||| | |  | ||      
T  30416664 atcacttatttcaataaaagggaaatagaaaaaacaagttagaggtgtgattttggttcaaaaattgaccataaattacccctttttggtggatgaagat 30416763  T
Q  115 gaagaaactagaattttg 132  Q
    ||||||||||||||||||    
T  30416764 gaagaaactagaattttg 30416781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 46775902 - 46775986
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    |||||||| ||  ||||||||||||||||||||| ||||| | ||||||||  ||||||||||||| | ||||| |||||||||||    
T  46775902 acttatttcaattaaagggaaagagaaaaacgagatagagtgatgattttgggtcaaaaattgatcat-aatcatccctctttgat 46775986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 23926112 - 23926024
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || | ||||||| ||||||||| |||||||||||||||||   |||||||| ||| || |||  |||||||||||||    
T  23926112 atcacttatttaaatagaagggaaggagaaaaacaagttagaggggtgatttgagatcaaaaaatgacccaaaactacccctctttgat 23926024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 51646164 - 51646076
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || |||||||||| | |||||||| ||||||||||||||||   | ||||||||| | ||||||| | |||||||||    
T  51646164 atcacttatttcaataaaagggaaataaaaaaacgaattagaggggtgattttaggttaaaaattgaccataaatcatctctctttgat 51646076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 53903681 - 53903617
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaatt 80  Q
    ||||||||||| || |||||||||| |||||||||||||||||| ||||||| |  |||||||||    
T  53903681 atcacttatttcaataaaagggaaatagaaaaacgagttagaggagtgatttagggtcaaaaatt 53903617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 42972109 - 42972030
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||| || |||||  ||| |||||||| ||||||| | |||||||||  ||||||||||| ||||||||||||    
T  42972109 atcacttatttcaataaaagcaaaatagaaaaacaagttagatgagtgattttgggtcaaaaattgaccctaaatcaccc 42972030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 43156847 - 43156761
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcc-taaatcacccctctttg 102  Q
    ||||||||||| || |||| ||||| | |||| || ||||||||||||||||||  ||||||||||| || |||||||||||||||||    
T  43156847 atcacttatttcaataaaaaggaaatataaaa-cgtgttagaggggtgattttgggtcaaaaattgacccgtaaatcacccctctttg 43156761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 9549538 - 9549485
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || |||||| |||||||||||||||||||| | |||||||||    
T  9549538 atcacttatttcaataaaaggaaaagagaaaaacgagttagaagtgtgattttg 9549485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 7242834 - 7242898
Alignment:
Q  38 aaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||||||| |||||||  ||||||||||  ||||||||||| |||||||| ||||| ||||    
T  7242834 aaagagaaaaacaagttagaaaggtgattttgggtcaaaaattgaccctaaatcgcccctttttg 7242898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 29577149 - 29577209
Alignment:
Q  37 gaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccct 97  Q
    |||| ||||||||||| ||||||||  ||||||| ||||||| ||| ||||||||||||||    
T  29577149 gaaaaagaaaaacgagatagaggggatattttgagtcaaaaagtgaccctaaatcacccct 29577209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 35338465 - 35338389
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatca 92  Q
    ||||||||||| |||| ||||||||||||| || |||||| || |||||||| |  |||||| |||| |||||||||    
T  35338465 atcacttatttcaacataagggaaagagaagaatgagttacagaggtgatttagggtcaaaatttgaccctaaatca 35338389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 44375333 - 44375384
Alignment:
Q  42 agaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcac 93  Q
    |||||||||| ||||||| |||||||||| ||||||||||| | ||||||||    
T  44375333 agaaaaacgaattagaggagtgattttgagtcaaaaattgaccttaaatcac 44375384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 46716937 - 46716988
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt 67  Q
    ||||||||||| || |||||| ||| ||||||||||||||||| ||||||||    
T  46716937 atcacttatttcaataaaaggaaaatagaaaaacgagttagagaggtgattt 46716988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 33289326 - 33289384
Alignment:
Q  73 caaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaatttt 131  Q
    ||||||||||||||||| ||||| |||||||||| || |||| | ||||||| ||||||    
T  33289326 caaaaattgatcctaaaccacccatctttgatagacgaaggaaacgaaactaaaatttt 33289384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 28990369 - 28990328
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttaga 57  Q
    ||||||||||| || ||||| |||||||||||||||||||||    
T  28990369 atcacttatttcaataaaagagaaagagaaaaacgagttaga 28990328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 32189038 - 32188989
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaatt 80  Q
    |||||||||| |||||||||| ||||||||||||| | | ||||||||||    
T  32189038 aaaagggaaaaagaaaaacgaattagaggggtgatataggatcaaaaatt 32188989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 38546188 - 38546290
Alignment:
Q  49 cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttgacgatggttcacaaga 148  Q
    |||||||||||||||||||||  |||||  |||| | |||||| ||||||||||||||  |  ||| |||||||||| ||||||  ||||  ||||||||    
T  38546188 cgagttagaggggtgattttgggtcaaa--ttgaccttaaatctcccctctttgatagatgacggaaaagaaactaggattttggtgatgactcacaaga 38546285  T
Q  149 aagaa 153  Q
     ||||    
T  38546286 gagaa 38546290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 2945208 - 2945172
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgag 52  Q
    ||||||||||| || ||||||||||||||||||||||    
T  2945208 atcacttatttcaataaaagggaaagagaaaaacgag 2945172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 1e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 3603056 - 3602917
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||| |||||||||||| |||||||||||||||||||| |||||| |||| | |||||||||| |||||||| |  | |||||    
T  3603056 atcacttatttcaagaaaaggaaaagagaaaaacaagttagaggggtgattttgagtcaaaagttgaccataaatcacccatctttgatggatgaaggag 3602957  T
Q  116 aagaaactagaattttgacgatggttcacaagaaagaaag 155  Q
    |||||||||| ||||||  || || |||||||| ||||||    
T  3602956 aagaaactaggattttggtgacggctcacaagagagaaag 3602917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 25237372 - 25237506
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaag 118  Q
    |||||||| |||||||||||||| ||||||| |||| ||| |||||||||| ||||||| ||||  ||||||||||||||||| ||||  | |||||||     
T  25237372 acttatttcaacaaaagggaaagggaaaaacaagttcgagaggtgattttggatcaaaagttgactctaaatcacccctctttaatagatgaaggagaat 25237471  T
Q  119 aaactagaattttgacgatggttcacaagaaagaa 153  Q
    |||||||| |||| ||||||| |||||||| ||||    
T  25237472 aaactagagttttaacgatggctcacaagagagaa 25237506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 3390503 - 3390394
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |  | |||||    
T  3390503 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggag 3390404  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  3390403 aagaaactag 3390394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 25771516 - 25771407
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |  | |||||    
T  25771516 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggag 25771417  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  25771416 aagaaactag 25771407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 7640399 - 7640481
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  7640399 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 7640481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 37883724 - 37883638
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||||||||| |||| ||||| |||||||||| ||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  37883724 atcacttattttaataaaaaggaaatagaaaaacgaattagaggggtgattttggattaaaaattgaccctaaatcacccctctttg 37883638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 6089964 - 6089859
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||||| |||||||||||||||||  ||||||||||| | ||||||||||||||||||| |  | |||||    
T  6089964 atcacttatttcaataaaagggaaatagaaaaacgaattagaggggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggag 6089865  T
Q  116 aagaaa 121  Q
    ||||||    
T  6089864 aagaaa 6089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 25516565 - 25516456
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| ||||||| ||||||||||||||||||||  ||||| ||||| ||||||||||||||||||| | |  | |||||    
T  25516565 atcacttatttcaataaaagggaaatagaaaaatgagttagaggggtgattttgggtcaaatattgaccctaaatcacccctctttggtggatgaaggag 25516466  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  25516465 aagaaactag 25516456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 27191378 - 27191487
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||| |  ||||||||||| ||||||||| ||||||||| | |  | |||||    
T  27191378 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggag 27191477  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  27191478 aagaaactag 27191487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 27841192 - 27841301
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||| |  ||||||||||| ||||||||| ||||||||| | |  | |||||    
T  27841192 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggag 27841291  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  27841292 aagaaactag 27841301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 25623088 - 25623176
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || ||||||||||||||||||||||||| | |||||||||||  ||||||||||||  |||||||||||||||||||    
T  25623088 atcacttatttcaataaaagggaaagagaaaaacgagttatatgggtgattttgggtcaaaaattgataataaatcacccctctttgat 25623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 27024182 - 27024298
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||  ||||||| ||| |||||||||||| |||||||| |  | |||||    
T  27024182 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaaatgaccctaaatcacccatctttgatggatgaaggag 27024281  T
Q  116 aagaaactagaattttg 132  Q
    ||||||||||| |||||    
T  27024282 aagaaactagagttttg 27024298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 29812658 - 29812746
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || |||||| ||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  29812658 atcacttatttcaataaaaggtaaagagaaaaatgagttagaggggtgattttgtgtcaaaaattgaccctaaatcacctctctttgat 29812746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 3465030 - 3464944
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||| ||| ||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||    
T  3465030 atcacttatttcaataaaaggaaaatagaaaaacgagttagtgtggtgattttggatcaaaaattgaccctaaatcacccctctttg 3464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 41842017 - 41841883
Alignment:
Q  20 cttattttaacaaaagggaaagagaaaaacgagttagaggggtga-ttttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaag 118  Q
    ||||||| || ||||||||||||||||||||||||| |||||||| |||||  ||||||||||| | ||||||| |||||| |||| |  | |||||||     
T  41842017 cttatttcaataaaagggaaagagaaaaacgagttaaaggggtgatttttgggtcaaaaattgaccataaatcaaccctctatgatggatgaaggagaaa 41841918  T
Q  119 aaactagaattttgacgatggttcacaagaaagaa 153  Q
    |||||||| |||||  |||||||||||| ||||||    
T  41841917 aaactagagttttggtgatggttcacaaaaaagaa 41841883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 42105796 - 42105881
Alignment:
Q  17 tcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||||| || |||||||||| ||||||||||||||||| ||||||||||  ||||||||||| |||||| ||||||||||||    
T  42105796 tcacttatttcaataaaagggaaatagaaaaacgagttagagtggtgattttgggtcaaaaattgaccctaaagcacccctctttg 42105881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 40125460 - 40125323
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||| ||||| || ||||| |||| |||||||| |||||||||||||||||||  ||||||||| | ||||||||||||||||||| | |  | |||||    
T  40125460 atcacgtatttcaataaaagagaaatagaaaaacaagttagaggggtgattttgggtcaaaaattaaccctaaatcacccctctttggtggatgaaggag 40125361  T
Q  116 aagaaactagaattttgacgatggttcacaagaaagaa 153  Q
    |||||||||   |||||| || || |||||||| ||||    
T  40125360 aagaaactaaggttttgatgacggctcacaagagagaa 40125323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 10589110 - 10589023
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| ||||||| | |||||||||||||||||||  ||||||||||| |||||||||||||| ||||    
T  10589110 atcacttatttcaataaaagggaaatagaaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctttttg 10589023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 5930494 - 5930408
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||  || |||||||||| ||||||||||||||||||| ||||||||  ||||||||| | ||||||||||| |||||||    
T  5930494 atcacttattgaaataaaagggaaacagaaaaacgagttagagggatgattttgggtcaaaaattaaccctaaatcacctctctttg 5930408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 26491374 - 26491288
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||| ||||||| |||||| |||||||||||||  ||||||||||| | ||||| |||||||||||    
T  26491374 atcacttatttcaataaaagggaaatagaaaaatgagttaaaggggtgattttgggtcaaaaattgaacttaaattacccctctttg 26491288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 41176934 - 41176824
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtagga 114  Q
    ||||||||||| || ||||| |||| ||||||| ||||||||| ||||| |||||  ||||||||||| ||||||||||||||||||| | |  | ||||    
T  41176934 atcacttatttcaataaaagagaaatagaaaaaacgagttagatgggtggttttgggtcaaaaattgaccctaaatcacccctctttggtggatgaagga 41176835  T
Q  115 gaagaaactag 125  Q
    |||||||||||    
T  41176834 gaagaaactag 41176824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 44167755 - 44167861
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaag 118  Q
    |||||||| ||  ||||| ||| ||||||||||||||||||||||||||||  ||||||||||| | || |||||||||||||| | |  | ||||||||    
T  44167755 acttatttcaattaaaggaaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccatatatcacccctctttggtggatgaaggagaag 44167854  T
Q  119 aaactag 125  Q
    |||||||    
T  44167855 aaactag 44167861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 43566946 - 43566840
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||| ||||| |||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||| | |  | |||||    
T  43566946 atcacttatttcaataaaaaggaaatagaaaaacgagttaga-gggtgattttgggtcaaaaattgaccct-aatcacccctctttggtggatgaaggag 43566849  T
Q  116 aagaaacta 124  Q
    |||||||||    
T  43566848 aagaaacta 43566840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 19953641 - 19953582
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaa 75  Q
    ||||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||    
T  19953641 atcacttatttcaataaaagggaaagagaaaaacgagttagataggtgattttgaatcaa 19953582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 19581045 - 19581131
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaa-acgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || |||||||||| | |||| ||||||||||||||||||||||  | ||||||||| || |||||||||||||||    
T  19581045 atcacttatttcaataaaagggaaataaaaaaaacgagttagaggggtgattttgtgttaaaaattgacccaaaatcacccctcttt 19581131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 13268644 - 13268560
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttaga-ggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||  ||||||| ||| | ||||||||||||||||    
T  13268644 atcacttatttcaacaaaagggcaagag-aaaacgagttagagggggtgattttggttcaaaaa-tgaccataaatcacccctcttt 13268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 9715587 - 9715676
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaa-acgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || |||||| ||| |||||| ||||||| ||| | |||||||| |||||||||||| |||||||||||| | ||||||    
T  9715587 atcacttatttcaataaaaggaaaaaagaaaaaacgagttggagagatgattttggatcaaaaattgaccctaaatcacccatttttgat 9715676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 15674045 - 15674102
Alignment:
Q  44 aaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    |||||| ||||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  15674045 aaaaacaagttagaggagtgattttgggtcaaaaattgaccctaaatcacccctcttt 15674102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 34480027 - 34479911
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||||||||||  | |||| | |||||||||||  | ||||||||| |||| |||| || |||||||| |  | | |||    
T  34480027 atcacttatttcaataaaagggaaagagaaaattgtgttataagggtgattttgggtaaaaaattgaccctatatcatccatctttgatggatgaatgag 34479928  T
Q  116 aagaaactagaattttg 132  Q
    ||||||||||| |||||    
T  34479927 aagaaactagagttttg 34479911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 16880024 - 16880087
Alignment:
Q  38 aaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    |||| ||||||||||| |||||||||||||||  ||||||||||| |  |||||||||||||||    
T  16880024 aaagggaaaaacgagtgagaggggtgattttgggtcaaaaattgaccaaaaatcacccctcttt 16880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 36507999 - 36507893
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaag 118  Q
    |||||||| || |||||| ||| ||||||| |||| |||| ||||||||||  ||||||||||| ||||| |||||  |||||| | |  | ||||||||    
T  36507999 acttatttcaataaaaggaaaatagaaaaatgagtcagagaggtgattttgggtcaaaaattgaccctaagtcaccattctttggtggatgaaggagaag 36507900  T
Q  119 aaactag 125  Q
    |||||||    
T  36507899 aaactag 36507893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 44951512 - 44951435
Alignment:
Q  77 aattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttgacgatggttcacaagaaagaaag 155  Q
    |||||| ||||||||||||||||||| | |  | ||||||||||||||| |||||||||| |||| |||||| ||||||    
T  44951512 aattgaccctaaatcacccctctttggtggatgaaggagaagaaactaggattttgacgacggtt-acaagagagaaag 44951435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 2251388 - 2251473
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || | ||||||| ||||||||||| ||||||| ||||||| |  |||||| |||| || ||| |||||||||||    
T  2251388 atcacttatttaaatagaagggaaggagaaaaacgatttagaggagtgatttggggtcaaaatttgacccaaaaccacccctcttt 2251473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 29734261 - 29734193
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgat 83  Q
    ||||||||||| || |||||||||| ||||||| ||||||||||| |||||||||  |||||| |||||    
T  29734261 atcacttatttcaataaaagggaaatagaaaaaacgagttagaggagtgattttgggtcaaaatttgat 29734193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 44441457 - 44441369
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    |||||||||||  | ||||| |||||| ||||||||||||||   |||||||||  |||||||||||  |||| |||||| ||||||||    
T  44441457 atcacttatttcgataaaagagaaagataaaaacgagttagataagtgattttgggtcaaaaattgactctaagtcacccatctttgat 44441369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 4878795 - 4878854
Alignment:
Q  73 caaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttg 132  Q
    ||||| |||| ||||||||||||||||||||| || | ||| |||||||||||| |||||    
T  4878795 caaaagttgaccctaaatcacccctctttgatgggtgaaggtgaagaaactagagttttg 4878854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 5071413 - 5071501
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || ||||| |||  |||||||||| ||||| |||||||||    ||||||||||| | |||| |||||||| |||||    
T  5071413 atcacttatttaaataaaagagaagaagaaaaacgatttagaagggtgatttaaggtcaaaaattgaccataaaccacccctcgttgat 5071501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 24470466 - 24470357
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||| | |  | |||||    
T  24470466 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggag 24470367  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  24470366 aagaaactag 24470357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 24475414 - 24475305
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||| | |  | |||||    
T  24475414 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggag 24475315  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  24475314 aagaaactag 24475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 40775338 - 40775233
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |  | |||||    
T  40775338 atcacttatttcaataaaagggaaaaggaaaaacgagttataggggtgattttggatcaaaaattgaccctaaatcacccctctttgatggatgaaggag 40775239  T
Q  116 aagaaa 121  Q
    ||||||    
T  40775238 aagaaa 40775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 25855263 - 25855342
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  25855263 atcacttatttcaataaaagggaaagagaaaaacgagttagagggatgattttggatcaaaaattgaccctaaatcaccc 25855342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 47749805 - 47749719
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||||||||||||||| ||||||||||||||||  ||||||||||| | |||||||||||||||||    
T  47749805 atcacttatttcaataaaagggaaagagaaaaacgagatagaggggtgattttgggtcaaaaattgaccataaatcacccctctttg 47749719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 28015428 - 28015342
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || |||||||||| ||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  28015428 atcacttatttcaataaaagggaaatagaaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctcttt 28015342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 49166998 - 49166889
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||| ||||||||||||||||||   ||||||||||| |||||||||||| |||||| | |  | |||||    
T  49166998 atcacttatttcaataaaagggaaatagaaaaacaagttagaggggtgattttaggtcaaaaattgaccctaaatcacccatctttggtggatgaaggag 49166899  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  49166898 aagaaactag 49166889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 16263457 - 16263370
Alignment:
Q  18 cacttattttaacaaaagggaaagag-aaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||| || ||||| |||| || |||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  16263457 cacttatttcaataaaagagaaataggaaaaacaagttagagaggtgattttggatcaaaaattgatcctaaatcacccctctttgat 16263370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 8611665 - 8611750
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||| |||  |||||||  || ||||||||||||||||||    
T  8611665 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgatattgggtcaaaaagagaccctaaatcacccctcttt 8611750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 23732436 - 23732524
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||| ||||| || ||||  ||||||||||||||||||||||  |||||||||| ||||||||||| | |||||||||||||||||||    
T  23732436 atcacatatttcaataaaatagaaagagaaaaacgagttagagaagtgattttgagtcaaaaattgaccttaaatcacccctctttgat 23732524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 22751510 - 22751420
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgatag 106  Q
    |||||||||||||| |||||||||| || ||||||||||||| ||||||||||   |||||||||||||| |||||| |||| ||| ||||    
T  22751510 atcacttattttaataaaagggaaatagtaaaacgagttagaagggtgattttatctcaaaaattgatccaaaatcatccctttttaatag 22751420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 29804719 - 29804805
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || | ||||||| ||||||||||| ||||||||||||||| |  ||||||||||| |||||| ||||||||||||    
T  29804719 atcacttatttaaatagaagggaaggagaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaaccacccctctttg 29804805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 30992866 - 30992948
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||||||||| |||||||| |||||||||||||||||||  ||||||||| | | |||||||||||||    
T  30992866 atcacttatttcaataaaagggaaatagaaaaacaagttagaggggtgattttgggtcaaaaattaaccttaaatcacccctc 30992948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 44681532 - 44681454
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||| || |||||||||| |||||||||||||||| ||||||||||   ||||||||||| ||||||||||||    
T  44681532 atcacttatttcaataaaagggaaaaagaaaaacgagttaga-gggtgattttaggtcaaaaattgaacctaaatcaccc 44681454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 13008716 - 13008793
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacc 94  Q
    ||||||||||| || ||||| ||||||||||||| ||||||| |||| ||||||||| ||||||||| |||||||||||    
T  13008716 atcacttatttcaataaaagagaaagagaaaaactagttaga-gggttattttgaattaaaaattgaccctaaatcacc 13008793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 43807197 - 43807271
Alignment:
Q  20 cttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacc 94  Q
    |||||||||| ||||| |||| ||||||||||||||||| ||||||||||  ||||||||||| | |||||||||    
T  43807197 cttattttaataaaagagaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgaccataaatcacc 43807271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 37399697 - 37399645
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt 68  Q
    |||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  37399697 atcatttatttcaataaaagggaaagagaaaaacgagttagaggggtgatttt 37399645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 33530511 - 33530599
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgatag 106  Q
    ||||||||||| || ||||  |||| ||||||||| |||||||||||| |||||  |||||  |||| |||||||||||||||||||||||    
T  33530511 atcacttatttcaataaaaaagaaaaagaaaaacgggttagaggggtggttttgggtcaaa--ttgaccctaaatcacccctctttgatag 33530599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 21329339 - 21329424
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || | ||||||| ||| ||||||| |||||||||||| ||||  ||||||||||| |||||| ||||||||||||    
T  21329339 atcacttatttaaatagaagggaatgaggaaaacgatttagaggggtga-tttgggtcaaaaattgaccctaaaccacccctctttg 21329424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 42490773 - 42490720
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    |||||||||||  | |||||||||| ||||||||||||||||||||||||||||    
T  42490773 atcacttatttcgataaaagggaaaaagaaaaacgagttagaggggtgattttg 42490720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 7985963 - 7985883
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccc 96  Q
    |||| |||||| || | |||||||||||||||||||||||||||| || ||||   |||||| |||| |||||||||||||    
T  7985963 atcatttatttcaatagaagggaaagagaaaaacgagttagagggatggttttaggtcaaaagttgaccctaaatcacccc 7985883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 9933918 - 9933866
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt 68  Q
    |||||||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  9933918 atcacttattttaataaaagggaaatagaaatactagttagaggggtgatttt 9933866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 24045295 - 24045363
Alignment:
Q  36 ggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||||| | |||||| |||||||||||  ||||||||||| | ||||||||| |||||||||    
T  24045295 ggaaagagaaaaatgtgttagacgggtgattttgggtcaaaaattgaccttaaatcaccactctttgat 24045363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 47156465 - 47156388
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||| || |||||| ||| |||||  |||||||||||| |||||||| |||||||||||| | ||||||||||    
T  47156465 atcacttatttcaataaaaggaaaatagaaa--cgagttagagggatgattttggatcaaaaattgaccttaaatcaccc 47156388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 8319386 - 8319299
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||||||||| |||| ||||| ||||||| ||||||| | |||||||||||  |||||| |||| | |||||||| ||||||||    
T  8319386 atcacttattttaataaaatggaaaaagaaaaaacgagttacatgggtgattttgggtcaaaagttgaccataaatcactcctctttg 8319299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 10250524 - 10250603
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||| || |||| ||||  |||||||||| ||||||||||||||||| ||| |||||||| |||  |||||||    
T  10250524 atcacttatttcaataaaaaggaattagaaaaacgaattagaggggtgattttggatcgaaaattgaccctttatcaccc 10250603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 14734092 - 14734181
Alignment:
Q  16 atcacttattttaacaaaagggaaagag-aaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| || | ||||||| ||| |||||||  ||||||||||||||| |  ||||||||||| |||||| ||||| ||||||||    
T  14734092 atcacttatttaaatagaagggaatgaggaaaaacgttttagaggggtgatttggggtcaaaaattgaccctaaaccacccttctttgat 14734181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 35141794 - 35141882
Alignment:
Q  16 atcacttattttaacaaaaggg--aaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || ||||||   ||||| ||||| |||||||| ||||||||||   ||||||||||| |||||||||||| ||||||    
T  35141794 atcacttatttcaataaaaggttaaaagacaaaaatgagttagaagggtgatttttggtcaaaaattgaccctaaatcacccttctttg 35141882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 26017701 - 26017753
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt 68  Q
    ||||||||||| || |||||||||| | |||||||| ||||||||||||||||    
T  26017701 atcacttatttcaataaaagggaaataaaaaaacgaattagaggggtgatttt 26017753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 39090187 - 39090127
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaa 75  Q
    ||||||||||| || |||||||||| ||||||| |||||||||| |||||||||| |||||    
T  39090187 atcacttatttcaataaaagggaaatagaaaaaacgagttagagaggtgattttggatcaa 39090127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 43483637 - 43483581
Alignment:
Q  44 aaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctt 100  Q
    |||||| |||||||||| |||||||  |||||||||||| |||||||||| ||||||    
T  43483637 aaaaacaagttagagggatgattttagatcaaaaattgaccctaaatcactcctctt 43483581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 38649400 - 38649482
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgag-ttagaggggtgattttgaatcaaaaattgatcctaaatcacccct 97  Q
    ||||||||||| || |||||| ||| |||||||  |  |||||||||||||||||  |||||||||||  |||||||||||||    
T  38649400 atcacttatttcaataaaaggaaaatagaaaaaataaattagaggggtgattttgggtcaaaaattgactctaaatcacccct 38649482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 15124023 - 15124076
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaac-gagttagaggggtgatttt 68  Q
    ||||||||||| || |||||||||||| ||||||  ||||||||||||||||||    
T  15124023 atcacttatttcaataaaagggaaagataaaaacttagttagaggggtgatttt 15124076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 23177640 - 23177740
Alignment:
Q  32 aaagggaaagagaaaaacgagttagaggggtgattttgaat-caaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattt 130  Q
    ||||| |||||||||||| ||||||||| |||||||||  |  ||||||||| | |||||||| | ||||| || |  | |||||||||||||||| |||    
T  23177640 aaaggaaaagagaaaaactagttagaggagtgattttgggtaaaaaaattgaccttaaatcactcatctttaatggatgaaggagaagaaactagagttt 23177739  T
Q  131 t 131  Q
    |    
T  23177740 t 23177740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 41748542 - 41748621
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa--cgagttagaggggtgattttgaatcaaaaattgatcctaaatcac 93  Q
    ||||| |||||||| |||||| ||| |||||||  | | ||||||| ||||||||| |||||||||||| | ||||||||    
T  41748542 atcacctattttaataaaaggaaaatagaaaaaaacaatttagaggagtgattttggatcaaaaattgaccgtaaatcac 41748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 46918456 - 46918385
Alignment:
Q  32 aaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    |||||||||||||||| ||||||| ||||| |||| ||  |||||||||||  ||||||||  ||||||||||    
T  46918456 aaagggaaagagaaaa-cgagttaaaggggcgattatgggtcaaaaattgactctaaatcatacctctttgat 46918385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 6212929 - 6213038
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||||||||||||| |||||||||  ||||||||||| | ||||||||||||||||||| | || |||||    
T  6212929 atcacttatttcaataaaagggaaaaggaaaaacgagttagaggtgtgattttgggtcaaaaattgaccataaatcacccctctttgatggacgaaggag 6213028  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  6213029 aagaaactag 6213038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 22344955 - 22345064
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || ||||||||||  ||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |  | |||||    
T  22344955 atcacttatttcaataaaagggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaacctaaatcacccctctttgatggatgaaggag 22345054  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  22345055 aagaaactag 22345064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 14717286 - 14717424
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||||||| |||||||||||||||| |||||| ||| | ||||||||||| ||||||||||||||||||| | |  | |||||    
T  14717286 atcacttatttcaataaaagggaaaaagaaaaacgagttaga-gggtgaatttaagtcaaaaattgaccctaaatcacccctctttggtggatgaaggag 14717384  T
Q  116 aagaaactagaattttgacgatggttcacaagaaagaaag 155  Q
    ||||||||||| |||||  || || |||||||| ||||||    
T  14717385 aagaaactagagttttggtgacggctcacaagagagaaag 14717424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 21326544 - 21326462
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  21326544 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgatttttgttcaaaaattgatcctaaatcacccctc 21326462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 5832304 - 5832220
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctt 100  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||||    
T  5832304 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctctt 5832220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 44562792 - 44562871
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcaccc 95  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  44562792 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcaccc 44562871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 38646655 - 38646521
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| || |||||  |||||||||||||||||| | |||||||||||  ||||||||||| | |||||||| ||||||||||||  | |||||    
T  38646655 atcacttatttcaataaaagaaaaagagaaaaacgagttacatgggtgattttgggtcaaaaattgaccataaatcactcctctttgatagatgaaggag 38646556  T
Q  116 aagaaactagaattttgacgatggttcacaagaaa 150  Q
    || ||| |||| ||||| |||||| ||||| ||||    
T  38646555 aaaaaattagagttttggcgatggctcacaggaaa 38646521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 17579839 - 17579751
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||||| ||  ||||||||||||||||| ||||||||||| ||||||||  ||||||||||| ||||| |||||||||||||||    
T  17579839 atcacttatttcaattaaagggaaagagaaaaatgagttagagggatgattttggttcaaaaattgaccctaagtcacccctctttgat 17579751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 630828 - 630909
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccct 97  Q
    ||||||||||| || |||||||||| |||||||||||||||| ||||||||| |  ||||||||||| ||||||||||||||    
T  630828 atcacttatttcaataaaagggaaatagaaaaacgagttagatgggtgatttagggtcaaaaattgaccctaaatcacccct 630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 46589245 - 46589161
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||||||||| ||||| |||| | |||| |||||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  46589245 atcacttattttaataaaagagaaatataaaa-cgagttagaggg-tgattttgagtcaaaaattgatcataaatcacccctctttg 46589161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 52839569 - 52839504
Alignment:
Q  39 aagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    |||| |||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||||||    
T  52839569 aagaaaaaaacgagttagaagggtgattttgggtcaaaaattgatcataaatcacccctctttgat 52839504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 8893364 - 8893300
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaatt 80  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  8893364 atcacttatttcaataaaagggaaagagaaaaacgagttagaagggtgattttgggtcaaaaatt 8893300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 52752096 - 52752015
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    |||||||| || |||||||||| ||||||||||||||||| |||||||||| |||||||    ||||||||||| |||||||||||    
T  52752096 acttatttcaataaaagggaaaaagaaaaacgagttagagaggtgattttggatcaaaa----atcctaaatcatccctctttgat 52752015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 35077933 - 35078019
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || ||||  |||||||||||||||||||||| ||||||||||  |||||| |||||| ||||||| | |||||||    
T  35077933 atcacttatttcaataaaaatgaaagagaaaaacgagttagagaggtgattttgggtcaaaatttgatcataaatcatctctctttg 35078019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 44514032 - 44514118
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaa-cgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || |||||||||| ||||||| | ||||| || ||||||||||  ||||||||||| ||||||||||||||||||    
T  44514032 atcacttatttcaataaaagggaaatagaaaaaacaagttaaagaggtgattttgggtcaaaaattgaccctaaatcacccctcttt 44514118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 52839466 - 52839409
Alignment:
Q  44 aaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    |||||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||    
T  52839466 aaaaacgagttagaagggtgattttgggtcaaaaattgaccctaaatcacccctcttt 52839409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 13691801 - 13691881
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccc 96  Q
    ||||||||||| || | ||| ||| ||||||||||| |||||||||||||||||  ||||||||||| |||||| ||||||    
T  13691801 atcacttatttaaatagaagtgaaggagaaaaacgatttagaggggtgattttgggtcaaaaattgaccctaaaccacccc 13691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 23320508 - 23320448
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaat 79  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  23320508 acttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaat 23320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 40992407 - 40992352
Alignment:
Q  16 atcacttatttt--aacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  40992407 atcacttatttttcaataaaagggaaagagaaaaacgagttagaggggtgattttg 40992352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45659113 - 45659041
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaa 88  Q
    ||||||||||| || |||||| |||||||||||||||||||||  |||||||||  ||||||||||| |||||    
T  45659113 atcacttatttcaataaaaggtaaagagaaaaacgagttagagcagtgattttgggtcaaaaattgaccctaa 45659041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 10877417 - 10877330
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaat-caaaaattgatcctaaatcacccctctttg 102  Q
    ||||||| ||| || ||||||||||||||||||||||||||||| |||||||||  |  ||||||||| | ||||||||| |||||||    
T  10877417 atcacttttttcaataaaagggaaagagaaaaacgagttagaggtgtgattttgggtaaaaaaattgaccataaatcaccactctttg 10877330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 4564589 - 4564536
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || ||||| |||| ||||||||||||||||||||||||||||    
T  4564589 atcacttatttcaataaaagagaaatagaaaaacgagttagaggggtgattttg 4564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 15276493 - 15276546
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttg 69  Q
    ||||||||||| || ||||||||||||||||||||||| ||| |||||||||||    
T  15276493 atcacttatttcaataaaagggaaagagaaaaacgagtgagatgggtgattttg 15276546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 23257159 - 23257108
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt 67  Q
    ||||||||||| || ||||||||||| ||||||||||| |||||||||||||    
T  23257159 atcacttatttcaataaaagggaaagggaaaaacgagtgagaggggtgattt 23257108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 27469821 - 27469916
Alignment:
Q  62 tgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttgacgatggttcacaagaaagaaagaa 157  Q
    ||||||||  || |||||||| | |||||||||||||||| || |  | || |||||||||||||||||||  || || |||||||||||||||||    
T  27469821 tgattttggttcgaaaattgaccttaaatcacccctctttaatggatgaagaagaagaaactagaattttggtgacggctcacaagaaagaaagaa 27469916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 12148091 - 12148177
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||| ||||| ||||||||||||||||| |||  |||||  ||||||| |||  |||||||||| |||||||    
T  12148091 atcacttatttgaataaaaaggaaatagaaaaacgagttagagtggtatttttgggtcaaaaactgacgctaaatcaccgctctttg 12148177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 15698271 - 15698230
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttaga 57  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  15698271 atcacttatttcaataaaagggaaagagaaaaacgagttaga 15698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 22032135 - 22032219
Alignment:
Q  18 cacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt-gaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||| || |||||| |||||||||| | | |||||||||||||||| |  ||||||||||| ||||||||| |||||||||    
T  22032135 cacttatttcaataaaaggaaaagagaaaa-caatttagaggggtgatttttgggtcaaaaattgaccctaaatcatccctctttg 22032219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 29067121 - 29067080
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttaga 57  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  29067121 atcacttatttcaataaaagggaaagagaaaaacgagttaga 29067080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 48655110 - 48655195
Alignment:
Q  17 tcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||||| || |||||||||||| ||||| |||||  ||  |||||||||  |||||||||||  ||||||||||||| ||||    
T  48655110 tcacttatttcaataaaagggaaagataaaaatgagttgcagatgtgattttgggtcaaaaattgactctaaatcacccctttttg 48655195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 49651901 - 49651840
Alignment:
Q  21 ttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattga 82  Q
    |||||| || |||| ||||| |||||||||||||||| | ||||||||| ||||||||||||    
T  49651901 ttatttcaataaaaaggaaatagaaaaacgagttagatgtgtgattttggatcaaaaattga 49651840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 30853841 - 30853965
Alignment:
Q  32 aaagggaaagagaaaaacgagttagagggg-tgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattt 130  Q
    ||||||||||||||||| || |||| |||| ||||||||  ||||||||||| | | |||||| |||||||| | |  | |||||||||||||||  |||    
T  30853841 aaagggaaagagaaaaatgacttagtgggggtgattttgggtcaaaaattgaccttgaatcacacctctttggtggatgaaggagaagaaactagggttt 30853940  T
Q  131 tgacgatggttcacaagaaagaaag 155  Q
    ||  ||||| ||| |||| ||||||    
T  30853941 tggtgatggctcaaaagagagaaag 30853965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 1768037 - 1767986
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt 67  Q
    |||| |||||| || ||||||||||||||||||||| ||||||| |||||||    
T  1768037 atcatttatttcaataaaagggaaagagaaaaacgaattagaggagtgattt 1767986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 33177640 - 33177721
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||| ||||||| ||||| |||||||| || ||||||||| |||||||||   | |||||||||||||    
T  33177640 atcacttatttcaataaaaaggaaaga-aaaaaggagttagatggatgattttgagtcaaaaattagccataaatcacccctc 33177721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 40488445 - 40488491
Alignment:
Q  21 ttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt 67  Q
    |||||| || ||||||||||||||||||  |||||||||||||||||    
T  40488445 ttatttcaataaaagggaaagagaaaaataagttagaggggtgattt 40488491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 19759859 - 19759777
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 98  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  19759859 atcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 19759777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 16913399 - 16913290
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    ||||||||||| ||  |||| ||||| ||||||||||||||||||||||||| |  ||||||||||| ||||||||||||||||||| | |  | |||||    
T  16913399 atcacttatttcaatgaaagtgaaagtgaaaaacgagttagaggggtgatttcgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggag 16913300  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  16913299 aagaaactag 16913290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 7049317 - 7049232
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || |||||||||||||||||| ||| | ||||||||||||||| |||||| |||| |||||||||||||||||||    
T  7049317 atcacttatttcaataaaagggaaagagaaaaatgagct-gaggggtgattttgagtcaaaagttgaccctaaatcacccctctttg 7049232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 20845079 - 20845013
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattga 82  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  20845079 atcacttatttcaataaaagggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattga 20845013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 12576521 - 12576606
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| ||  ||||||||| |||||||| ||||||||||||||||| |  ||||||||||| ||||||||||||||||||    
T  12576521 atcacttatttcaattaaagggaaatagaaaaacaagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctcttt 12576606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 32457716 - 32457632
Alignment:
Q  17 tcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    |||||||||| || ||||  ||||||||||||||||||||| |||||||||||  |||||||||||  |||||||||||||||||    
T  32457716 tcacttatttcaataaaaatgaaagagaaaaacgagttagatgggtgattttgggtcaaaaattgacgctaaatcacccctcttt 32457632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 4663863 - 4663949
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||||||||| ||||| |||| | ||||||| ||||||||||||||||||  ||||||||||| ||  |||||||||||||||    
T  4663863 atcacttattttaataaaagagaaacataaaaacgtgttagaggggtgattttgggtcaaaaattgacccacaatcacccctctttg 4663949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 15128192 - 15128267
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatca 92  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||||||   |||||||||| |||||||||    
T  15128192 atcacttatttcaatacaagggaaagagaaaaacgagttagaggggtgattttgggacaaaaattga-cctaaatca 15128267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 548912 - 548991
Alignment:
Q  20 cttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctct 99  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||  ||||||||||| | || ||||| |||||    
T  548912 cttatttcaataaaagggaaaaagaaaaacgagttagaggggtgattttgggtcaaaaattgaccttatatcactcctct 548991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 1944167 - 1944113
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttga 70  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||||||||    
T  1944167 atcacttatttcaataagagggaaagagaaaaacgagttagaggggtgattttga 1944113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 32804366 - 32804281
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaac-gagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctt 100  Q
    ||||||||||| || ||||||| ||||||||||  |||||||| |||||||||||  ||||||||||| |||||||||||| ||||    
T  32804366 atcacttatttcaataaaagggtaagagaaaaaatgagttagatgggtgattttgggtcaaaaattgaccctaaatcacccatctt 32804281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 13234151 - 13234233
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctct 99  Q
    ||||||||||| || |||||||||| |||||||||| |||||  |||||||||   ||||||||||| ||||||||||||||||    
T  13234151 atcacttatttcaataaaagggaaaaagaaaaacgaattaga-aggtgattttaggtcaaaaattgaccctaaatcacccctct 13234233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 8644314 - 8644228
Alignment:
Q  18 cacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgat 104  Q
    ||||||||| || |||||||||||||||||| || || ||| |||||||||   ||||||||||| |||||||||||| | ||||||    
T  8644314 cacttatttcaataaaagggaaagagaaaaatgaatttgagtggtgatttttggtcaaaaattgaccctaaatcacccatttttgat 8644228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 33194656 - 33194598
Alignment:
Q  36 ggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacc 94  Q
    |||||||||||||||| ||||||  ||||||||| |||||||||||| |||||||||||    
T  33194656 ggaaagagaaaaacgaattagagatgtgattttggatcaaaaattgaccctaaatcacc 33194598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 23843467 - 23843511
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggg 60  Q
    |||||||||||||| |||||||||| |||||||||||||||||||    
T  23843467 atcacttattttaataaaagggaaatagaaaaacgagttagaggg 23843511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 891659 - 891551
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    |||| |||||| || |||| | ||| |||||||||||||| |||||| ||||||  |||||||| || ||| ||||||| |||||| || |  | |||||    
T  891659 atcatttatttcaataaaatgaaaacagaaaaacgagttataggggtaattttgggtcaaaaatcgacccttaatcacctctctttaatggatgaaggag 891560  T
Q  116 aagaaacta 124  Q
    |||||||||    
T  891559 aagaaacta 891551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 31748026 - 31747945
Alignment:
Q  19 acttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    |||||||| ||  ||| |||||||||||||||||||||||||||  ||| |  ||||||||||| ||||||||| | |||||||    
T  31748026 acttatttcaattaaaaggaaagagaaaaacgagttagaggggtcttttgg--tcaaaaattgaccctaaatcatctctctttg 31747945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 10744622 - 10744539
Alignment:
Q  44 aaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaa 127  Q
    |||||| ||||||||| |||||||||  |||||| |||| |||||||||||| |||||| | |  | ||| |||||||||||||    
T  10744622 aaaaacaagttagaggagtgattttgggtcaaaagttgaccctaaatcacccatctttggtggatgaaggtgaagaaactagaa 10744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 27575113 - 27575208
Alignment:
Q  59 gggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaagaaactagaattttgacgatggttcacaagaaagaaa 154  Q
    ||||||||||   |||||||||||| ||| |||| ||||||||||| |  | | ||||| ||||||||||||||| || || |||||| |||||||    
T  27575113 gggtgattttaggtcaaaaattgattctatatcatccctctttgatggatgaaagagaataaactagaattttgatgacggatcacaaaaaagaaa 27575208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 33541572 - 33541623
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattt 67  Q
    ||||||||||| || | ||||||| ||||||||||| |||||||||||||||    
T  33541572 atcacttatttaaatagaagggaaggagaaaaacgatttagaggggtgattt 33541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 903525 - 903441
Alignment:
Q  19 acttattttaacaaaagggaaagaga--aaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    |||||||| |||||||||||||||||  |||| |||||||| || | |||||  || ||||||| | ||||||||||| ||||||    
T  903525 acttatttaaacaaaagggaaagagaaaaaaatgagttagacggattattttcgataaaaaattaaccctaaatcacctctcttt 903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 22530335 - 22530287
Alignment:
Q  32 aaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaatt 80  Q
    ||||||||||||||||| |||||| | |||||||||||  |||||||||    
T  22530335 aaagggaaagagaaaaaggagttaaatgggtgattttgggtcaaaaatt 22530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 9691 - 9800
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggag 115  Q
    |||||||| || || |||||||||| |||||||||||||||||| |||||||||  ||||||||||| ||||||||| ||||||||| | |  | |||||    
T  9691 atcacttaattcaataaaagggaaatagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaatcatccctctttggtggatgaaggag 9790  T
Q  116 aagaaactag 125  Q
    ||||||||||    
T  9791 aagaaactag 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 11090 - 11004
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| || || ||||||| ||||||| ||||||||||||||||||| | ||||||||||| || ||||||||| ||||||    
T  11090 atcacttatttcaataagagggaaaaagaaaaatgagttagaggggtgattttaagtcaaaaattgacccaaaatcacccatctttg 11004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 1184 - 1261
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacc 94  Q
    ||||||||||| || ||||||||||||||||||||||||||| |  ||||||||| || |||||||||| |||||||||    
T  1184 atcacttatttcaataaaagggaaagagaaaaacgagttagatgattgattttgagtc-aaaattgatcataaatcacc 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 11820 - 11896
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatca 92  Q
    ||||||||||| || |||||||||| |||||||||||||||| | |||||||||  |||||||||||  ||||||||    
T  11820 atcacttatttcaataaaagggaaatagaaaaacgagttagatgagtgattttgggtcaaaaattgacactaaatca 11896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 849 - 734
Alignment:
Q  18 cacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggcgtaggagaa 117  Q
    ||||||||| || ||||||||||||| |||||||||||||| | |||||||   ||||||||||| | ||||||||  || |||| | |  | |||||||    
T  849 cacttatttcaataaaagggaaagaggaaaacgagttagagtgatgatttttggtcaaaaattgaccttaaatcacatctttttggtggatgaaggagaa 750  T
Q  118 gaaactagaattttga 133  Q
    ||||||||| ||||||    
T  749 gaaactagagttttga 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 5569 - 5643
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaat 90  Q
    ||||||||||| || ||||| |||| |||||||||||||| |||||  ||||||| ||||||||||| |||||||    
T  5569 atcacttatttcaataaaagagaaatagaaaaacgagttaaaggggcaattttgagtcaaaaattgaccctaaat 5643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 12246 - 12318
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaa 88  Q
    ||||||||||| || ||||||||||||||| |||||| ||||| | ||||||||  ||||||||||| |||||    
T  12246 atcacttatttcaataaaagggaaagagaagaacgagctagagagatgattttgggtcaaaaattgaccctaa 12318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 244707 - 244620
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatt--ttgaatcaaaaattgatcctaaatcacccctcttt 101  Q
    ||||||||||| || |||| | |||||||||||||||||||||||||||||  | | |  ||||||||| ||||||||| ||||||||    
T  244707 atcacttatttcaataaaaagaaaagagaaaaacgagttagaggggtgatttatggtaaaaaaaattgaccctaaatcaaccctcttt 244620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 10383 - 10436
Alignment:
Q  31 aaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatc 84  Q
    ||||||||||||||||||| ||||||| ||||| |||||  |||||||||||||    
T  10383 aaaagggaaagagaaaaacaagttagaagggtggttttgggtcaaaaattgatc 10436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 36600 - 36548
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgatttt 68  Q
    ||||||||||| || ||||||||||  ||||||||||||||| ||||||||||    
T  36600 atcacttatttcaataaaagggaaaaggaaaaacgagttagaagggtgatttt 36548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 105123 - 105037
Alignment:
Q  16 atcacttattttaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctctttg 102  Q
    ||||||||||| |||||| ||||| |||||||||||  ||||||| |||||| |  |||||| |||| | |||| |||| |||||||    
T  105123 atcacttatttaaacaaaggggaaggagaaaaacgatgtagagggctgatttggggtcaaaatttgaccttaaaccacctctctttg 105037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University