View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18655_low_22 (Length: 340)
Name: NF18655_low_22
Description: NF18655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18655_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 83 - 323
Target Start/End: Complemental strand, 42863554 - 42863314
Alignment:
| Q |
83 |
ctaaagactagactcgtacaaatcagattaacttcctctcctccattaatcatatttgctacaaccaaggaatctacaatctacatttagctcatctgaa |
182 |
Q |
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| T |
42863554 |
ctaaagactagactcgtacaaatcagattaacttcccctcctccattaatcatatttgctacaaccaaggaatctacaatctacatttagctcatctgaa |
42863455 |
T |
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| Q |
183 |
ttaaatcccatcctttttgcaactagcaaaccttcgtacacatcccataacttttttaaaaacgtgcgacacttaccctaaaacttacaagaaccctcct |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
42863454 |
ttaaatcccatcctttttgcaactagcaaaccttcgtacacatcccataacttttttaaaaacgtgcaacacttaccctaaaacttacaagaaccctcct |
42863355 |
T |
|
| Q |
283 |
atccatttaccatatgactctctaatgattatcactgaagc |
323 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
42863354 |
atccatttaccatatgactctctaatgattatcacttaagc |
42863314 |
T |
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