View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18655_low_31 (Length: 267)
Name: NF18655_low_31
Description: NF18655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18655_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 40403086 - 40403323
Alignment:
| Q |
9 |
gaagaatatagaaaaaggtgtatatgatgccaaaatggatatcgaggtaaccaccgtaacatttttaaggtnnnnnnntccgtataggagagttagagga |
108 |
Q |
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| T |
40403086 |
gaagaatatagaaaaaggtgtatatgatgccaaaatggatatcgaggtaaccaccgtaacatttttaaggtaaaaaaatccgtataggagagttagagga |
40403185 |
T |
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| Q |
109 |
gtcacaagagcaccctgaccctttggaataggaaggaggcaatggaattggttacacaagtgtattagcaccttgtatgagctgtatggctttaaaccac |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
40403186 |
gtcacaagagcaccctgaccctttggaataggaaggaggcaatggaattggttacacaagtgtattagcaccttgtatgagctgtaaggctttaaaccac |
40403285 |
T |
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| Q |
209 |
ttggtgggtgacacataagaaagaagattggtgggccc |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
40403286 |
ttggtgggtgacacataagaaagaagattggtgggccc |
40403323 |
T |
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