View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18655_low_39 (Length: 243)
Name: NF18655_low_39
Description: NF18655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18655_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 3 - 228
Target Start/End: Original strand, 39948971 - 39949196
Alignment:
| Q |
3 |
caaagggctacaaatattgtcacaacaaataccagcttcctcgtcaactcaagttaacatacaccaaatgacaatgtcacaaaatatatcttctgcacaa |
102 |
Q |
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| T |
39948971 |
caaagggctacaaatattgtcacaacaaataccagcttcctcgtcaactcaagttaacatacaccaaatgacaatgtcacaaaatatatcttctgcacaa |
39949070 |
T |
|
| Q |
103 |
caagatcatatgctctcgccacacaatgattctccacaaccacagctgctaccaacacaaacatcaccagatggaacatgtttgagaacttctgcacaac |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39949071 |
caagatcatatgctctcgccacacaatgattctccacaaccacagctgctaccaacacaaacatcaccagatggaacatgtttgagaacttctgcacaac |
39949170 |
T |
|
| Q |
203 |
atacccaaggtaattggattgataaa |
228 |
Q |
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|||||||||||||||||||||||||| |
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| T |
39949171 |
atacccaaggtaattggattgataaa |
39949196 |
T |
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