View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18655_low_40 (Length: 242)
Name: NF18655_low_40
Description: NF18655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18655_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 12670123 - 12669899
Alignment:
| Q |
1 |
tttataaatctaaagctggctagtactgctcctgccattctttcttcattctctgcaatcactaattaagagtatgattcatatgatacaggtcccaata |
100 |
Q |
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| T |
12670123 |
tttataaatctaaagctggctagtactgctcctgccattctttcttcattctctgcaatcactaattaagagtatgattcatatgatacaggtcccaata |
12670024 |
T |
|
| Q |
101 |
aggaaaatctcatgcatgtgatgagtactagtaggagcaagttcatgaccaccatggtcaaccctttgagattctgtgacaaaaaagaagaagacattgg |
200 |
Q |
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| T |
12670023 |
aggaaaatctcatgcatgtgatgagtactagtaggagcaagttcatgaccaccatggtcaaccctttgagattctgtgacaaaaaagaagaagacattgg |
12669924 |
T |
|
| Q |
201 |
tggctctgaaattgtagctgacaat |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
12669923 |
tggctctgaaattgtagctgacaat |
12669899 |
T |
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