View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18655_low_55 (Length: 213)
Name: NF18655_low_55
Description: NF18655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18655_low_55 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 36946889 - 36947067
Alignment:
| Q |
19 |
tgagagtcaacgaaaatggtgacttttgggtggctatccattgtagaaggtatatgtacagttacataaatgctctctacccaaagattagaaaagccat |
118 |
Q |
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| T |
36946889 |
tgagagtcaacgaaaatggtgacttttgggtggctatccattgtagaaggtatatgtacagttacataaatgctctctacccaaagattagaaaagccat |
36946988 |
T |
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| Q |
119 |
actcaagctacctatcccaacaaggattcaatacctgctacatattggaggcaaaatgcatgcagccgttgttaagtat |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
36946989 |
actcaagctacctatcccaacaaggattcaatacctgctacatattggaggcaaaatgcatgcagccgtcgttaagtat |
36947067 |
T |
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