View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18656_high_1 (Length: 429)

Name: NF18656_high_1
Description: NF18656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18656_high_1
NF18656_high_1
[»] chr8 (54 HSPs)
chr8 (66-182)||(14262330-14262446)
chr8 (29-184)||(30973991-30974142)
chr8 (66-193)||(2669641-2669768)
chr8 (66-181)||(19925355-19925469)
chr8 (74-181)||(36907618-36907729)
chr8 (66-181)||(2563363-2563478)
chr8 (68-181)||(43577226-43577339)
chr8 (29-160)||(9782209-9782335)
chr8 (73-194)||(1184775-1184896)
chr8 (29-194)||(28280701-28280862)
chr8 (66-194)||(14724931-14725058)
chr8 (66-185)||(32975688-32975807)
chr8 (67-184)||(19925559-19925676)
chr8 (29-159)||(24866884-24867010)
chr8 (66-194)||(34286530-34286657)
chr8 (29-185)||(41145329-41145483)
chr8 (29-181)||(37410846-37410993)
chr8 (66-184)||(32131442-32131560)
chr8 (36-194)||(31079106-31079260)
chr8 (29-190)||(9131061-9131218)
chr8 (66-181)||(11988202-11988316)
chr8 (66-180)||(12607086-12607199)
chr8 (108-194)||(28879050-28879136)
chr8 (66-184)||(42363283-42363400)
chr8 (66-178)||(16972322-16972435)
chr8 (146-194)||(9781207-9781255)
chr8 (66-158)||(14942452-14942544)
chr8 (65-181)||(24350484-24350600)
chr8 (108-194)||(35453402-35453488)
chr8 (66-184)||(42102109-42102226)
chr8 (66-159)||(218220-218311)
chr8 (66-159)||(694780-694871)
chr8 (66-159)||(698989-699080)
chr8 (66-159)||(731843-731934)
chr8 (66-159)||(855739-855830)
chr8 (66-142)||(10298892-10298968)
chr8 (66-185)||(38895660-38895779)
chr8 (66-184)||(32924179-32924296)
chr8 (66-184)||(38338817-38338934)
chr8 (73-139)||(35055466-35055535)
chr8 (73-159)||(35168411-35168500)
chr8 (73-184)||(8216876-8216989)
chr8 (66-131)||(9130983-9131048)
chr8 (77-142)||(25333709-25333773)
chr8 (119-184)||(29243083-29243147)
chr8 (66-182)||(38195491-38195606)
chr8 (66-113)||(2656522-2656569)
chr8 (96-183)||(16706096-16706183)
chr8 (66-117)||(25333667-25333718)
chr8 (78-136)||(13131489-13131547)
chr8 (27-181)||(32751143-32751293)
chr8 (66-123)||(25465813-25465870)
chr8 (66-130)||(8752862-8752926)
chr8 (73-137)||(9788859-9788922)
[»] chr1 (71 HSPs)
chr1 (29-183)||(16708802-16708951)
chr1 (29-184)||(51162271-51162422)
chr1 (66-184)||(37156886-37157002)
chr1 (67-176)||(29333427-29333536)
chr1 (73-163)||(34265592-34265682)
chr1 (66-194)||(6337722-6337850)
chr1 (66-194)||(48819291-48819419)
chr1 (66-184)||(4068117-4068235)
chr1 (66-163)||(46263421-46263517)
chr1 (66-194)||(37329378-37329506)
chr1 (29-176)||(26988158-26988301)
chr1 (66-184)||(35282560-35282678)
chr1 (73-194)||(15515320-15515441)
chr1 (66-194)||(45267457-45267586)
chr1 (22-179)||(13038954-13039107)
chr1 (97-184)||(37148092-37148177)
chr1 (29-181)||(37712073-37712220)
chr1 (66-184)||(3069820-3069938)
chr1 (66-184)||(3116028-3116145)
chr1 (66-184)||(32497238-32497355)
chr1 (73-182)||(35590134-35590243)
chr1 (90-185)||(36422971-36423066)
chr1 (44-182)||(26542977-26543111)
chr1 (66-184)||(9572750-9572869)
chr1 (66-184)||(17628391-17628508)
chr1 (29-184)||(26435108-26435258)
chr1 (73-194)||(1005332-1005453)
chr1 (66-182)||(10082254-10082371)
chr1 (68-181)||(46689518-46689631)
chr1 (66-182)||(15631908-15632024)
chr1 (66-177)||(16888932-16889042)
chr1 (65-184)||(46473096-46473215)
chr1 (66-156)||(12256637-12256726)
chr1 (90-183)||(26946094-26946188)
chr1 (92-184)||(5243396-5243487)
chr1 (22-139)||(25485795-25485908)
chr1 (67-159)||(41196677-41196769)
chr1 (90-182)||(49971255-49971347)
chr1 (93-184)||(18327526-18327617)
chr1 (66-184)||(15235127-15235244)
chr1 (66-184)||(15791386-15791503)
chr1 (66-184)||(17814193-17814310)
chr1 (98-184)||(20169266-20169352)
chr1 (86-184)||(28122618-28122716)
chr1 (29-156)||(42591412-42591535)
chr1 (66-159)||(35275864-35275956)
chr1 (66-181)||(10365176-10365290)
chr1 (92-155)||(45179028-45179090)
chr1 (73-159)||(13412426-13412511)
chr1 (22-60)||(47880984-47881022)
chr1 (74-143)||(1683875-1683944)
chr1 (66-159)||(5347182-5347274)
chr1 (29-159)||(19220201-19220326)
chr1 (66-159)||(22103138-22103229)
chr1 (73-194)||(31378724-31378845)
chr1 (73-181)||(16225514-16225620)
chr1 (92-156)||(50919517-50919581)
chr1 (30-157)||(8061943-8062071)
chr1 (97-148)||(12973050-12973101)
chr1 (65-184)||(41129996-41130115)
chr1 (66-131)||(391232-391295)
chr1 (73-123)||(49738274-49738324)
chr1 (66-131)||(14461007-14461072)
chr1 (90-184)||(19284898-19284994)
chr1 (97-158)||(23544819-23544880)
chr1 (149-194)||(28870216-28870261)
chr1 (66-131)||(38781133-38781198)
chr1 (66-182)||(41003391-41003507)
chr1 (267-319)||(47886195-47886247)
chr1 (67-155)||(18317032-18317120)
chr1 (363-403)||(47885997-47886037)
[»] chr4 (60 HSPs)
chr4 (27-193)||(22397236-22397398)
chr4 (66-184)||(2702681-2702799)
chr4 (33-194)||(43983317-43983476)
chr4 (29-195)||(26206288-26206449)
chr4 (66-184)||(47202828-47202945)
chr4 (80-194)||(2141633-2141747)
chr4 (67-184)||(46175946-46176062)
chr4 (74-194)||(7148764-7148884)
chr4 (66-181)||(29877644-29877759)
chr4 (29-156)||(41228933-41229056)
chr4 (66-182)||(4603298-4603413)
chr4 (66-184)||(15184549-15184666)
chr4 (29-159)||(17222856-17222982)
chr4 (73-194)||(48591397-48591518)
chr4 (21-185)||(896971-897131)
chr4 (80-194)||(52274100-52274214)
chr4 (66-194)||(488350-488478)
chr4 (66-142)||(18630861-18630937)
chr4 (74-184)||(23297440-23297547)
chr4 (91-183)||(28074368-28074459)
chr4 (98-182)||(39932752-39932836)
chr4 (66-142)||(46704236-46704312)
chr4 (66-181)||(18424244-18424358)
chr4 (66-185)||(23335643-23335762)
chr4 (66-184)||(19725295-19725413)
chr4 (66-184)||(38345788-38345905)
chr4 (29-112)||(7396354-7396434)
chr4 (73-184)||(948074-948186)
chr4 (66-182)||(33533932-33534048)
chr4 (66-194)||(55638047-55638174)
chr4 (90-181)||(22303101-22303191)
chr4 (29-136)||(22273830-22273933)
chr4 (76-194)||(36740896-36741014)
chr4 (66-160)||(39931510-39931603)
chr4 (80-182)||(52700524-52700626)
chr4 (80-141)||(7206566-7206627)
chr4 (66-184)||(12495610-12495730)
chr4 (66-182)||(42611835-42611950)
chr4 (90-181)||(46650276-46650367)
chr4 (108-182)||(212956-213029)
chr4 (66-184)||(15179820-15179937)
chr4 (90-184)||(35124389-35124483)
chr4 (66-184)||(42617196-42617313)
chr4 (65-190)||(825678-825803)
chr4 (29-131)||(2547980-2548078)
chr4 (66-159)||(22117381-22117473)
chr4 (86-131)||(35405739-35405784)
chr4 (66-131)||(36255002-36255067)
chr4 (65-142)||(40699400-40699481)
chr4 (66-126)||(48721880-48721940)
chr4 (92-158)||(10046260-10046326)
chr4 (67-129)||(31022457-31022519)
chr4 (100-142)||(45018577-45018619)
chr4 (66-123)||(11256627-11256684)
chr4 (93-182)||(27368145-27368234)
chr4 (92-156)||(4398198-4398262)
chr4 (90-194)||(8601194-8601297)
chr4 (66-114)||(23284757-23284805)
chr4 (66-142)||(28663617-28663692)
chr4 (66-122)||(34633455-34633510)
[»] chr3 (59 HSPs)
chr3 (29-194)||(38524080-38524241)
chr3 (29-181)||(30383773-30383918)
chr3 (30-167)||(20174874-20175007)
chr3 (29-184)||(4974313-4974464)
chr3 (66-184)||(40240543-40240661)
chr3 (73-189)||(48816719-48816828)
chr3 (66-194)||(45049340-45049468)
chr3 (38-184)||(28741152-28741298)
chr3 (74-149)||(19307978-19308053)
chr3 (102-194)||(30473145-30473241)
chr3 (29-184)||(29614196-29614346)
chr3 (73-195)||(43079907-43080029)
chr3 (66-182)||(53218006-53218122)
chr3 (29-184)||(3645305-3645455)
chr3 (65-182)||(40581041-40581159)
chr3 (66-184)||(22809159-22809278)
chr3 (107-194)||(37601034-37601121)
chr3 (73-181)||(585025-585133)
chr3 (66-194)||(45331261-45331389)
chr3 (29-182)||(32901081-32901230)
chr3 (29-184)||(20894505-20894655)
chr3 (29-182)||(4257231-4257383)
chr3 (66-159)||(34707679-34707772)
chr3 (66-179)||(42956145-42956258)
chr3 (80-184)||(52021248-52021353)
chr3 (66-182)||(1516064-1516179)
chr3 (66-194)||(3870192-3870320)
chr3 (66-162)||(37243490-37243586)
chr3 (66-155)||(48597832-48597922)
chr3 (98-184)||(51409395-51409481)
chr3 (66-159)||(37778161-37778253)
chr3 (67-159)||(37456401-37456492)
chr3 (91-194)||(52421132-52421234)
chr3 (29-184)||(3876196-3876347)
chr3 (108-182)||(10448778-10448852)
chr3 (66-140)||(33946516-33946590)
chr3 (99-184)||(2086690-2086775)
chr3 (97-182)||(11528895-11528980)
chr3 (66-131)||(17752097-17752162)
chr3 (66-131)||(19053417-19053482)
chr3 (74-131)||(20685840-20685897)
chr3 (108-185)||(32900736-32900813)
chr3 (44-157)||(47403710-47403820)
chr3 (119-184)||(51662806-51662871)
chr3 (73-137)||(23816144-23816208)
chr3 (66-143)||(29830605-29830686)
chr3 (90-181)||(30917484-30917575)
chr3 (66-130)||(52895371-52895435)
chr3 (66-156)||(24841352-24841443)
chr3 (96-194)||(33468118-33468221)
chr3 (80-175)||(43971827-43971922)
chr3 (66-182)||(24842072-24842189)
chr3 (92-130)||(29270417-29270455)
chr3 (66-124)||(42381226-42381284)
chr3 (90-131)||(7300418-7300459)
chr3 (29-131)||(53787685-53787783)
chr3 (66-102)||(10449061-10449097)
chr3 (30-112)||(21720981-21721059)
chr3 (133-181)||(36266249-36266297)
[»] scaffold0004 (1 HSPs)
scaffold0004 (66-194)||(227698-227827)
[»] chr2 (50 HSPs)
chr2 (67-194)||(12238453-12238577)
chr2 (67-180)||(24439025-24439138)
chr2 (67-156)||(16108089-16108178)
chr2 (66-182)||(21788461-21788577)
chr2 (21-184)||(27880922-27881081)
chr2 (73-182)||(29774749-29774858)
chr2 (29-183)||(4026929-4027078)
chr2 (73-184)||(32522019-32522129)
chr2 (123-194)||(43796922-43796993)
chr2 (80-182)||(32366154-32366255)
chr2 (66-123)||(12950081-12950138)
chr2 (74-194)||(4004811-4004931)
chr2 (29-182)||(15155817-15155966)
chr2 (27-184)||(38471722-38471875)
chr2 (66-185)||(887413-887532)
chr2 (67-178)||(33321279-33321390)
chr2 (66-184)||(11776986-11777104)
chr2 (66-156)||(42064881-42064971)
chr2 (111-184)||(34913401-34913474)
chr2 (76-184)||(25836688-25836796)
chr2 (85-182)||(5903537-5903634)
chr2 (66-159)||(36501481-36501574)
chr2 (97-181)||(43787800-43787884)
chr2 (73-184)||(4090491-4090602)
chr2 (21-137)||(17546473-17546585)
chr2 (66-160)||(735990-736084)
chr2 (66-148)||(7480865-7480946)
chr2 (22-184)||(2401548-2401705)
chr2 (90-159)||(22898347-22898415)
chr2 (66-159)||(38216046-38216139)
chr2 (97-155)||(17797233-17797289)
chr2 (73-182)||(755714-755824)
chr2 (97-159)||(24007820-24007882)
chr2 (73-155)||(30382242-30382324)
chr2 (73-181)||(13056300-13056408)
chr2 (66-186)||(22422135-22422254)
chr2 (66-114)||(43796987-43797035)
chr2 (66-184)||(10574127-10574245)
chr2 (148-182)||(16108511-16108545)
chr2 (92-182)||(37409647-37409737)
chr2 (74-123)||(4533385-4533434)
chr2 (123-184)||(8441475-8441536)
chr2 (81-194)||(12223844-12223957)
chr2 (111-160)||(27931481-27931530)
chr2 (123-184)||(40301354-40301414)
chr2 (66-114)||(446499-446547)
chr2 (73-184)||(5516077-5516189)
chr2 (92-156)||(9270124-9270187)
chr2 (108-159)||(13097944-13097996)
chr2 (122-182)||(41554602-41554662)
[»] chr5 (64 HSPs)
chr5 (66-184)||(15413994-15414112)
chr5 (66-182)||(40415938-40416054)
chr5 (66-182)||(39990580-39990696)
chr5 (29-195)||(29659053-29659213)
chr5 (66-194)||(28357344-28357472)
chr5 (66-194)||(28625472-28625600)
chr5 (66-159)||(36206059-36206153)
chr5 (29-184)||(41059722-41059873)
chr5 (66-184)||(42852024-42852141)
chr5 (29-183)||(29418685-29418835)
chr5 (66-182)||(13060568-13060684)
chr5 (66-182)||(43319007-43319123)
chr5 (66-194)||(1868838-1868966)
chr5 (66-182)||(17657246-17657362)
chr5 (66-181)||(29922155-29922270)
chr5 (66-184)||(5203400-5203517)
chr5 (97-184)||(25332233-25332322)
chr5 (66-156)||(41419531-41419621)
chr5 (66-159)||(23087745-23087838)
chr5 (93-194)||(41534615-41534716)
chr5 (66-194)||(6144730-6144858)
chr5 (29-142)||(9477380-9477489)
chr5 (74-181)||(12467269-12467377)
chr5 (90-194)||(38461272-38461376)
chr5 (22-148)||(40152802-40152924)
chr5 (29-181)||(16722032-16722179)
chr5 (66-184)||(4728848-4728964)
chr5 (66-156)||(7364275-7364365)
chr5 (66-184)||(24030217-24030334)
chr5 (66-159)||(6025951-6026044)
chr5 (74-182)||(12986988-12987096)
chr5 (94-182)||(15122549-15122636)
chr5 (29-194)||(40452410-40452572)
chr5 (66-181)||(26003002-26003117)
chr5 (94-194)||(42706788-42706890)
chr5 (89-182)||(1473360-1473454)
chr5 (29-130)||(2577361-2577459)
chr5 (66-184)||(10537193-10537303)
chr5 (32-185)||(13625456-13625606)
chr5 (66-194)||(40696993-40697126)
chr5 (66-123)||(42478889-42478946)
chr5 (22-152)||(11191450-11191575)
chr5 (66-182)||(11991309-11991424)
chr5 (73-180)||(11912075-11912182)
chr5 (76-131)||(35536900-35536955)
chr5 (66-184)||(1576633-1576750)
chr5 (66-184)||(1608065-1608182)
chr5 (20-194)||(6125279-6125448)
chr5 (93-194)||(31637087-31637184)
chr5 (66-156)||(7565230-7565323)
chr5 (97-180)||(11706915-11706998)
chr5 (98-156)||(18602632-18602691)
chr5 (117-184)||(33757090-33757156)
chr5 (90-184)||(2878667-2878760)
chr5 (66-184)||(20458524-20458641)
chr5 (92-158)||(28357169-28357235)
chr5 (66-159)||(780534-780626)
chr5 (66-123)||(6150855-6150912)
chr5 (73-182)||(7984109-7984218)
chr5 (66-137)||(5559885-5559959)
chr5 (111-163)||(15364035-15364087)
chr5 (116-184)||(17128280-17128348)
chr5 (91-184)||(22201923-22202020)
chr5 (66-114)||(33803772-33803820)
[»] chr7 (48 HSPs)
chr7 (66-182)||(35809094-35809210)
chr7 (73-194)||(29378637-29378758)
chr7 (80-181)||(22319271-22319372)
chr7 (66-194)||(47862714-47862841)
chr7 (29-194)||(43818811-43818971)
chr7 (29-182)||(22032766-22032915)
chr7 (66-182)||(22575590-22575706)
chr7 (66-184)||(44613439-44613557)
chr7 (29-184)||(47654347-47654498)
chr7 (29-182)||(29390484-29390632)
chr7 (66-194)||(47511035-47511165)
chr7 (66-159)||(16932896-16932988)
chr7 (66-159)||(16938279-16938371)
chr7 (66-184)||(28004586-28004703)
chr7 (66-184)||(38372560-38372678)
chr7 (66-159)||(16958843-16958935)
chr7 (66-150)||(18251490-18251573)
chr7 (66-182)||(30181554-30181670)
chr7 (86-181)||(41094223-41094316)
chr7 (66-182)||(34922935-34923053)
chr7 (66-159)||(14691265-14691358)
chr7 (66-182)||(991504-991619)
chr7 (66-182)||(14675926-14676041)
chr7 (32-194)||(30094665-30094825)
chr7 (66-182)||(35246676-35246789)
chr7 (66-153)||(19913978-19914065)
chr7 (97-184)||(21027510-21027597)
chr7 (29-181)||(44799409-44799555)
chr7 (66-181)||(48021614-48021728)
chr7 (66-159)||(9024791-9024885)
chr7 (96-181)||(20888578-20888664)
chr7 (66-136)||(46744003-46744073)
chr7 (66-159)||(23137129-23137221)
chr7 (123-184)||(24371430-24371490)
chr7 (92-157)||(39279458-39279523)
chr7 (66-182)||(2194008-2194126)
chr7 (66-158)||(23356457-23356549)
chr7 (32-181)||(47648543-47648687)
chr7 (66-156)||(37465852-37465943)
chr7 (97-156)||(43391751-43391810)
chr7 (29-156)||(1312144-1312266)
chr7 (29-142)||(6406800-6406914)
chr7 (73-131)||(16012753-16012811)
chr7 (22-156)||(8180517-8180647)
chr7 (90-159)||(19308481-19308550)
chr7 (64-156)||(47582528-47582620)
chr7 (90-155)||(48949752-48949816)
chr7 (97-133)||(14730017-14730053)
[»] chr6 (49 HSPs)
chr6 (66-184)||(10619231-10619351)
chr6 (76-184)||(8011020-8011130)
chr6 (78-190)||(2034207-2034319)
chr6 (31-183)||(3829849-3830002)
chr6 (66-194)||(32165227-32165354)
chr6 (66-182)||(32675855-32675971)
chr6 (67-182)||(29623444-29623559)
chr6 (66-184)||(10184296-10184413)
chr6 (66-184)||(32615381-32615498)
chr6 (66-194)||(29052325-29052453)
chr6 (66-184)||(2027142-2027260)
chr6 (66-184)||(4808574-4808691)
chr6 (108-182)||(6632663-6632737)
chr6 (66-194)||(10755249-10755374)
chr6 (66-184)||(21610015-21610133)
chr6 (66-184)||(21891304-21891422)
chr6 (66-182)||(2255738-2255854)
chr6 (66-182)||(6758631-6758747)
chr6 (66-184)||(1468178-1468294)
chr6 (95-183)||(7267778-7267866)
chr6 (92-184)||(21025219-21025311)
chr6 (66-184)||(10873988-10874104)
chr6 (66-184)||(17914948-17915065)
chr6 (90-194)||(10054374-10054475)
chr6 (77-184)||(10687309-10687419)
chr6 (117-194)||(10730258-10730331)
chr6 (66-182)||(23239251-23239367)
chr6 (90-185)||(6776809-6776904)
chr6 (97-172)||(7446859-7446934)
chr6 (73-159)||(15054558-15054644)
chr6 (73-159)||(16589778-16589864)
chr6 (73-159)||(16605516-16605602)
chr6 (66-184)||(23314780-23314897)
chr6 (66-184)||(23324947-23325064)
chr6 (97-159)||(34413346-34413408)
chr6 (66-182)||(1240576-1240693)
chr6 (119-184)||(9894768-9894833)
chr6 (90-142)||(1172386-1172438)
chr6 (100-180)||(24625857-24625937)
chr6 (120-184)||(30533982-30534046)
chr6 (90-184)||(8014790-8014884)
chr6 (66-131)||(9202365-9202430)
chr6 (66-159)||(16989727-16989820)
chr6 (113-182)||(17300752-17300820)
chr6 (66-184)||(25430732-25430847)
chr6 (73-194)||(34801023-34801142)
chr6 (75-194)||(991257-991377)
chr6 (66-106)||(10401769-10401809)
chr6 (29-114)||(17300687-17300768)
[»] scaffold1088 (1 HSPs)
scaffold1088 (84-182)||(1298-1396)
[»] scaffold0012 (1 HSPs)
scaffold0012 (29-182)||(178504-178655)
[»] scaffold0332 (1 HSPs)
scaffold0332 (73-194)||(14719-14840)
[»] scaffold0041 (1 HSPs)
scaffold0041 (86-181)||(108980-109073)
[»] scaffold0091 (2 HSPs)
scaffold0091 (143-194)||(2622-2673)
scaffold0091 (73-124)||(2534-2585)
[»] scaffold0512 (1 HSPs)
scaffold0512 (66-175)||(4076-4184)
[»] scaffold0024 (1 HSPs)
scaffold0024 (73-184)||(97182-97290)
[»] scaffold0157 (1 HSPs)
scaffold0157 (29-184)||(24747-24900)
[»] scaffold1367 (1 HSPs)
scaffold1367 (80-182)||(1062-1164)
[»] scaffold0006 (1 HSPs)
scaffold0006 (73-159)||(278965-279050)
[»] scaffold0100 (1 HSPs)
scaffold0100 (66-181)||(38419-38533)
[»] scaffold0027 (1 HSPs)
scaffold0027 (103-194)||(142332-142422)
[»] scaffold0057 (1 HSPs)
scaffold0057 (74-184)||(24363-24472)


Alignment Details
Target: chr8 (Bit Score: 101; Significance: 6e-50; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 14262446 - 14262330
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  14262446 ttttatgttaattcataagatcttactaacaaaaattgtatattcataagttgttttttcataaactaccttaacaaatttataaataacacattaatgc 14262347  T
Q  166 ttctttatttgcataag 182  Q
    |||||||||||||||||    
T  14262346 ttctttatttgcataag 14262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 30974142 - 30973991
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| |||||||||||||| |  ||    ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30974142 cttatgaaaaagagcttatgcaaataaataagctt----ttatgctaattcataagatcttactaacgaaaattgtaaattcataagttgttttttcata 30974047  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||  |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30974046 aactgccttaacaaatttataaataatacattaatgcttctttatttacataagct 30973991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 66 - 193
Target Start/End: Complemental strand, 2669768 - 2669641
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||    
T  2669768 ttttatgttaattcataagatcctactaatgaaaaatgtatattcataagttgttttttcataaactaccttaacaaacttataaataatacattagagc 2669669  T
Q  166 ttctttatttgcataagctctaaaataa 193  Q
    || |||||||||||||||| ||||||||    
T  2669668 ttatttatttgcataagctataaaataa 2669641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 19925355 - 19925469
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  19925355 ttttatgttaattcataatatcttactaacgaaaattgtatattcataagttgttatttcat-aactaccttaacaagtttataaataatacattaatgc 19925453  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  19925454 ttatttatttgcataa 19925469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 74 - 181
Target Start/End: Original strand, 36907618 - 36907729
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaattt----ataaataatacattaatgcttct 169  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    ||||||||||||||||| |||||    
T  36907618 taattcataagatcttactaacgaaaattgtatattcacaagttgttttttcataaactaccttaacaaatttataaataaataatacattaatacttct 36907717  T
Q  170 ttatttgcataa 181  Q
    ||||||||||||    
T  36907718 ttatttgcataa 36907729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 2563478 - 2563363
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| || |||||||| |||||||||||||||||||      
T  2563478 ttttatgttaattcataagatcttactaataaaaattgtatattcaaaagttgttttttcataaactactttaacaaacttataaataatacattaatat 2563379  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  2563378 ttatttatttgcataa 2563363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 43577339 - 43577226
Alignment:
Q  68 ttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgctt 167  Q
    |||| ||||||||||| || ||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||  ||    
T  43577339 ttatgttaattcataaaattttactaacgaaaattttatatttataagttgtttttttataaactaccttaacaaatttataaataatacattaatattt 43577240  T
Q  168 ctttatttgcataa 181  Q
     |||||||||||||    
T  43577239 atttatttgcataa 43577226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 9782335 - 9782209
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| | ||||||  ||||||| |   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  9782335 cttatgaaaaagagctgatgcaa--aaattaact---ttttatgttaattcataagatcttactaacgaaaattgtatattcataagttgttttttaata 9782241  T
Q  129 aacaaccttaacaaatttataaataatacatt 160  Q
    ||| || |||||||  ||||||||||||||||    
T  9782240 aactactttaacaagcttataaataatacatt 9782209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 1184896 - 1184775
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||| |||| ||| ||||||||||||||||||||| | |||||||||||  |||||| ||||||||||| || ||||| |||||||||||||| ||||    
T  1184896 ttaatttataatatcctactaacgaaaattgtatatttagaagttgtttttagataaactaccttaacaaacttttaaatgatacattaatgcttattta 1184797  T
Q  173 tttgcataagctctaaaataag 194  Q
    |||||||||||| |||||||||    
T  1184796 tttgcataagctttaaaataag 1184775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 28280862 - 28280701
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| |||||||||||||| | |    ||||||||||||||||||| ||| |||||| |||  | ||  |||||||   |||||||||||    
T  28280862 cttatgaaaaagagcttatgcaaataaataagt----ttttatcttaattcataagttctcactaacaaaaggtataccttcataaacagttttttcata 28280767  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||| || |||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  28280766 aactacattaacaaacttataaataatacataaatgcatatttatttgcataagctctaaaataag 28280701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 14724931 - 14725058
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    ||||||||||||||||||| ||||| ||||||||||| ||  | |||||||||||||||||||||  || |||||||  |||||||||||| || || |     
T  14724931 ttttatcttaattcataagttcttattaacgaaaattatacctacataagttgttttttcataaattacattaacaatcttataaataatatataaaag- 14725029  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
     |||||||||||||||||| |||||||||    
T  14725030 atctttatttgcataagctttaaaataag 14725058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 32975807 - 32975688
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| || ||| |||||||||| |||||||||||| ||||||||||| ||||| ||||  |||| ||||||| || || ||    
T  32975807 ttttatattaattcataagttctcacaaacaaaaattgtatcttcataagttgtgttttcataaactaccttgacaagcttatgaataatatataaaagc 32975708  T
Q  166 ttctttatttgcataagctc 185  Q
    || |||||||||||||||||    
T  32975707 ttatttatttgcataagctc 32975688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 67 - 184
Target Start/End: Complemental strand, 19925676 - 19925559
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgct 166  Q
    ||||| ||||||  |||| ||| ||||||||||||||||| ||||||| |||||||||| ||||  ||||||||||| ||||||||||||  | || |||    
T  19925676 tttattttaatttgtaagctctcactaacgaaaattgtatcttcataaattgttttttcgtaaaataccttaacaaacttataaataataattaaaagct 19925577  T
Q  167 tctttatttgcataagct 184  Q
    | ||||||||||||||||    
T  19925576 tatttatttgcataagct 19925559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 159
Target Start/End: Original strand, 24866884 - 24867010
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| |||||||||||||| | |    ||||||||||||| ||||| |||   ||||||||||||||  |||||||| ||||||||||||    
T  24866884 cttatgaaaaagagcttatgcaaataaataagt----ttttatcttaatttataagttctcgataacgaaaattgtaccttcataagctgttttttcata 24866979  T
Q  129 aacaaccttaacaaatttataaataatacat 159  Q
    ||| || |||||||  |||||||||||||||    
T  24866980 aactacattaacaatcttataaataatacat 24867010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 34286530 - 34286657
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||  |||||||||||||||| |||||||| || ||||||| |||| ||||| ||||  |||| |||||||||| || ||    
T  34286530 ttttatattaattcataagttctccctaacgaaaattgtatcttcataagctg-tttttcacaaactaccttgacaagcttatgaataatacataaaagc 34286628  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||| ||||||||| ||||||||    
T  34286629 ttatttatttacataagctcaaaaataag 34286657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 41145329 - 41145483
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| ||||||||||||||||| | ||||    ||| |||||||||||| ||| ||||| |||||| |||| || | ||||||||||||||||    
T  41145329 cttatgaaaaatagtttatgcaaataaataagttta----tatattaattcataagttctcactaatgaaaatcgtatcttta-aagttgttttttcata 41145423  T
Q  129 aacaaccttaacaaatttataaataatac---attaatgcttctttatttgcataagctc 185  Q
    ||| ||||||||||| |||| |||||||    || || |||| |||||||||||||||||    
T  41145424 aactaccttaacaaacttatgaataataataaataaaagcttatttatttgcataagctc 41145483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 29 - 181
Target Start/End: Original strand, 37410846 - 37410993
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||| |||||||| | ||||    ||| |||||| ||||| ||||||||||||||||||||| ||||| |  ||||||||||||    
T  37410846 cttatgaaaaatagcttatgtaaataaataagttta----tattttaatttataagttcttactaacgaaaattgtatcttcatgaactgttttttcata 37410941  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||| ||||||| ||| ||||||||||||||| ||  ||| ||||||| |||||    
T  37410942 aactaccttaa-aaaattataaataatacataaaaacttatttatttacataa 37410993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 32131560 - 32131442
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||||  ||||||||||| |||||| ||||||| ||||||||| ||||| ||||| |||  |||||| ||| || ||    
T  32131560 ttttatgttaattcataagttctcactattgaaaattgtatcttcataggttgtttattcataaactaccttgacaaacttaggaataatgcataaaagc 32131461  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  32131460 ttatttatttgcataagct 32131442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 31079106 - 31079260
Alignment:
Q  36 aaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacc 135  Q
    ||||||| |||||||||||||| | |    ||||||||||||||||||| | | |||| |||||||||||  || ||||   |||||||| ||||| ||     
T  31079106 aaaagagcttatgcaaataaataagt----ttttatcttaattcataagttttcactatcgaaaattgtaactttataaacagttttttcgtaaactact 31079201  T
Q  136 ttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    |||||||| ||| ||||||||||| ||||| | ||||||  ||||||||||||||||||    
T  31079202 ttaacaaacttaaaaataatacataaatgcatatttattaccataagctctaaaataag 31079260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 9131061 - 9131218
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || |||||||||||||| |    | |||||| |||||||||||| ||  ||||||||||||||||| |||||||| ||||| |||| |    
T  9131061 cttatgaaaaatagcttatgcaaataaataa----acttttatgttaattcataagttccgactaacgaaaattgtatcttcataagctgtttcttcaga 9131156  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaa 190  Q
    ||| |  |  ||||  ||||||||||||||| || |||| | ||||||||||||||| ||||    
T  9131157 aactaaatcgacaagcttataaataatacataaaagcttatatatttgcataagctcaaaaa 9131218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 11988316 - 11988202
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||   |||||||||| ||| ||||||| ||| ||||||||||||||| ||  |    
T  11988316 ttttattttaatttataagctctcactaacgaaaattgtatcttcataaacggttttttcatgaactaccttaa-aaacttataaataatacataaaaac 11988218  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  11988217 ttatttatttgcataa 11988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 12607199 - 12607086
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||| ||||||||| |||||||   |||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  12607199 ttttattttaatttataagctctcactaacggaaattgtatcttcataaaccgttttttcataaactaccttaa-aaacttataaataatacataaaaac 12607101  T
Q  166 ttctttatttgcata 180  Q
    || ||||||||||||    
T  12607100 ttatttatttgcata 12607086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 28879136 - 28879050
Alignment:
Q  108 ttcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||||||||||||| |||||||||| ||||| ||||  |||| |||||||||| || |||| ||||||||||||||||| ||||||||    
T  28879136 ttcataagttgttatttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataagctcaaaaataag 28879050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 42363283 - 42363400
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| | ||| ||| |||||| |||||||||| |||||||   |||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  42363283 ttttattttaatttaaaagttctcactaacaaaaattgtatcttcataaacggttttttcataaactaccttaa-aaacttataaataatacataaaaac 42363381  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  42363382 ttatttatttgcataagct 42363400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 16972322 - 16972435
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacctta-acaaatttataaataatacattaatg 164  Q
    |||||| || ||||||||| | | ||||||||||||||||| |||||||| ||||||||||| ||| |||||| ||||| |||| ||||||||||  | |    
T  16972322 ttttatattgattcataagttatcactaacgaaaattgtatcttcataagctgttttttcatgaactaccttagacaaacttatgaataatacatacaag 16972421  T
Q  165 cttctttatttgca 178  Q
    ||| ||||||||||    
T  16972422 cttatttatttgca 16972435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 9781255 - 9781207
Alignment:
Q  146 tataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9781255 tataaataatacattaatgcttatttatttgcataagctctaaaataag 9781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 158
Target Start/End: Complemental strand, 14942544 - 14942452
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataataca 158  Q
    |||||| |||||| ||||| |||| ||||| ||||||| || ||||||||| |||||||||||||| | ||||||||  ||||||||||||||    
T  14942544 ttttatgttaatttataagttcttgctaacaaaaattgcatcttcataagtcgttttttcataaactaacttaacaagcttataaataataca 14942452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 24350484 - 24350600
Alignment:
Q  65 attttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    ||||||| |||||||||||| ||||||||||||||||| ||| |||||||| | ||||||||||||  || || ||||  |||| ||||||| || || |    
T  24350484 attttatgttaattcataagttcttactaacgaaaattatatcttcataagctattttttcataaattacgttgacaagcttatgaataatatataaaag 24350583  T
Q  165 cttctttatttgcataa 181  Q
    |||  ||||||||||||    
T  24350584 cttaattatttgcataa 24350600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 35453488 - 35453402
Alignment:
Q  108 ttcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    |||||||| ||||||||||||||| ||||| | ||| |||| |||||||||| || |||| ||||||||||||||||  ||||||||    
T  35453488 ttcataagctgttttttcataaactaccttgataaacttatgaataatacataaaagcttatttatttgcataagctaaaaaataag 35453402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 42102226 - 42102109
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||  ||| | ||||||||||||||| ||||| |   |||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  42102226 ttttattttaatttataacctctcattaacgaaaattgtatcttcattaacggttttttcataaactaccttaa-aaacttataaataatacataaaaac 42102128  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  42102127 ttatttatttgcataagct 42102109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 218220 - 218311
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| ||||||| | | |||||||||||| ||||||| ||| |||||||||||||||    
T  218220 ttttattttaatttataagctattactaacgaaaattgtatcttcataaatag-tttttcataaactaccttaa-aaacttataaataatacat 218311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 694780 - 694871
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| ||||||| | | |||||||||||| ||||||| ||| |||||||||||||||    
T  694780 ttttattttaatttataagctattactaacgaaaattgtatcttcataaatag-tttttcataaactaccttaa-aaacttataaataatacat 694871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 698989 - 699080
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| ||||||| | | |||||||||||| ||||||| ||| |||||||||||||||    
T  698989 ttttattttaatttataagctattactaacgaaaattgtatcttcataaatag-tttttcataaactaccttaa-aaacttataaataatacat 699080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 731843 - 731934
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| ||||||| | | |||||||||||| ||||||| ||| |||||||||||||||    
T  731843 ttttattttaatttataagctattactaacgaaaattgtatcttcataaatag-tttttcataaactaccttaa-aaacttataaataatacat 731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 855739 - 855830
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| ||||||| | | |||||||||||| ||||||| ||| |||||||||||||||    
T  855739 ttttattttaatttataagctattactaacgaaaattgtatcttcataaatag-tttttcataaactaccttaa-aaacttataaataatacat 855830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 10298892 - 10298968
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaa 142  Q
    |||||| |||||||||||| ||| | |||| |||||||||| |||||||| ||||||||||||||| ||||| ||||    
T  10298892 ttttatgttaattcataagttctcattaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaa 10298968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 38895779 - 38895660
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| | | |||||| || ||||||| ||||||| || ||||||||||||| ||||||||||  |||| ||||||| || || |     
T  38895779 ttttatattaatttataagttttcactaacaaatattgtatcttcataaattattttttcataaactaccttaacaagcttatgaataataaataaaagt 38895680  T
Q  166 ttctttatttgcataagctc 185  Q
    || ||| |||||||||||||    
T  38895679 ttatttttttgcataagctc 38895660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 32924179 - 32924296
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| | | ||||| ||||||| ||| |||||||||||||||||||||||| || | |||||  |||||||||| | || || ||    
T  32924179 ttttatattaattcataagttttcactaa-gaaaattttatcttcataagttgttttttcataaactacataaacaagcttataaataacaaataaaagc 32924277  T
Q  166 ttctttatttgcataagct 184  Q
     | |||||| |||||||||    
T  32924278 atatttattcgcataagct 32924296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 38338817 - 38338934
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||||  ||| |||||||  | ||||||||||||| ||||||| ||| ||||||||||||  | ||  |    
T  38338817 ttttattttaatttataagttctcactaacgaaaatcatatcttcataaactattttttcataaactaccttaa-aaacttataaataatatttaaaaac 38338915  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  38338916 ttatttatttgcataagct 38338934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 35055535 - 35055466
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataa---gttgttttttcataaacaaccttaa 139  Q
    |||||||||||| ||| ||||||||||||||||| |||||||   ||| ||||||||||||| |||||||    
T  35055535 ttaattcataagctctcactaacgaaaattgtatcttcataaatggtttttttttcataaactaccttaa 35055466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 35168411 - 35168500
Alignment:
Q  73 ttaattcataagatctt---actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||||||||| ||||   ||| ||||||||||||| |||||||  ||||||||||||||| ||||| ||||  |||| ||||||||||    
T  35168411 ttaattcataagttcttctaactgacgaaaattgtatcttcataaactgttttttcataaactaccttgacaagcttatgaataatacat 35168500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 8216876 - 8216989
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacctta-acaaatttataaataatacat-taatgcttctt 170  Q
    |||||||| ||  ||||||||||||||||||||| |||||||  |  |||||||||||| |||||| ||||  |||| ||||||||||  || |||| ||    
T  8216876 ttaattcacaaattcttactaacgaaaattgtatcttcataacctactttttcataaactaccttagacaagattatgaataatacataaaaagcttatt 8216975  T
Q  171 tatttgcataagct 184  Q
     |||||||||||||    
T  8216976 aatttgcataagct 8216989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 9130983 - 9131048
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||||||||| ||  ||||||||||||||||| |||||| ||||||| |||| ||||    
T  9130983 ttttatgttaattcataagttccgactaacgaaaattgtatcttcataggttgtttcttcagaaac 9131048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 25333709 - 25333773
Alignment:
Q  77 ttcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaa 142  Q
    |||||||| | | ||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||    
T  25333709 ttcataagttttcactaacgaaaattgtatcttcataagttg-tttttcataaactaccttgacaa 25333773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 29243083 - 29243147
Alignment:
Q  119 ttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||| |||||| ||||||| ||| ||||||||||||||| || |||| ||||||||||||||||    
T  29243083 ttttttaataaactaccttaa-aaacttataaataatacataaaagcttatttatttgcataagct 29243147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 38195606 - 38195491
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||  ||| | |||| |||||||||| | |||||  ||||||||| ||||| ||||||| ||| |||||||||||| || ||  |    
T  38195606 ttttattttaatttataaactctcattaacaaaaattgtatttccataaactgttttttcgtaaactaccttaa-aaacttataaataatatataaaaac 38195508  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  38195507 ttatttatttgcataag 38195491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 2656569 - 2656522
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcata 113  Q
    |||||| ||| || ||||||| ||||||||||||||||||||||||||    
T  2656569 ttttatgttagtttataagattttactaacgaaaattgtatattcata 2656522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 16706096 - 16706183
Alignment:
Q  96 gaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagc 183  Q
    |||| |||||||||| || ||||||||||||||||| || ||  |||| |||| |||||||||| ||  | | |||||||||||||||    
T  16706096 gaaagttgtatattcgtatgttgttttttcataaactacattttcaaacttatgaataatacataaaaacatatttatttgcataagc 16706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 25333667 - 25333718
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagtt 117  Q
    |||||| |||||||||||| | | ||||||||||||||||| ||||||||||    
T  25333667 ttttatgttaattcataagttttcactaacgaaaattgtatcttcataagtt 25333718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 13131547 - 13131489
Alignment:
Q  78 tcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacct 136  Q
    ||||||| ||| || ||| |||||||||| |||||||| ||||||||||||||| ||||    
T  13131547 tcataagttctcacaaacaaaaattgtattttcataagctgttttttcataaactacct 13131489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 32751293 - 32751143
Alignment:
Q  27 aacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttg-ttttttc 125  Q
    ||||||||||||| | |||||| |||||||| |||||    |||| |||||| ||||  | ||||||||||||||||||| || ||||  || |||||||    
T  32751293 aacttatgaaaaataatttatgtaaataaataaattt----ttattttaatttataaacttttactaacgaaaattgtatttttataaaatgtttttttc 32751198  T
Q  126 ataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    |||||| || |||| ||| |||| |||| ||||| ||   || |||||||||||||    
T  32751197 ataaactactttaa-aaacttattaatagtacataaaaatttatttatttgcataa 32751143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 25465813 - 25465870
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttt 123  Q
    |||||| |||||||||||| | | | |||| |||||||||| ||||||||||||||||    
T  25465813 ttttatgttaattcataagttttcagtaacaaaaattgtatcttcataagttgttttt 25465870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 8752926 - 8752862
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaa 130  Q
    |||||| |||||||||||| ||| || ||| ||| |||||| ||| |||| ||||||||||||||    
T  8752926 ttttatgttaattcataagttctcacaaacaaaatttgtatcttcttaagctgttttttcataaa 8752862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 9788922 - 9788859
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacctt 137  Q
    |||||||||||| ||| |||||| ||||| |||| |||||||||| | ||||||||||| |||||    
T  9788922 ttaattcataagttctcactaacaaaaat-gtatcttcataagttttattttcataaactacctt 9788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 16708951 - 16708802
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||||| ||||||||||||||| |||||    |||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  16708951 cttatgaaaaaga-tttatgcaaataaataaattt----ttatgttaattcataagatcttactaatgaaaattgtatattcataaattgttttttcata 16708857  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagc 183  Q
    ||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||    
T  16708856 aacaaccttaacagatttataaatagtacattaatatttctttatttgcataagc 16708802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 51162422 - 51162271
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||| ||||| ||||||||||||||| ||||   | |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  51162422 cttataaaaaaaagtttatgcaaataa-ttaa---acttttatgttaatttataagatcttattaacgaaaattgtatattcataagttgttttttcata 51162327  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  51162326 aactaccttaacaaacttgtaaataatacattaatgcttatttatttgcataagct 51162271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 37156886 - 37157002
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||| ||||||||| | |||||||||||||||||||||    
T  37156886 ttttatgttaattcataagatcttactagcgaaaattgtatattcataggtt--tttttcataaactaccttaacatacttataaataatacattaatgc 37156983  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  37156984 ttatttatttgcataagct 37157002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 29333536 - 29333427
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgct 166  Q
    ||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| | | ||||||||| ||||||||||||||||||| ||    
T  29333536 tttatgttaattcatatgatcgtacgaacgaaaattgtatattcataagttgttttttcataagctatcttaacaaacttataaataatacattaatact 29333437  T
Q  167 tctttatttg 176  Q
    | ||||||||    
T  29333436 tatttatttg 29333427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 34265682 - 34265592
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaat 163  Q
    |||||| ||||||||||| |||| ||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34265682 ttaatttataagatcttattaacaaaatttgtctattcataagttgttttttcataaactaccttaacaaatttataaataatacattaat 34265592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 6337722 - 6337850
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||  ||||| |||||||||| |||||||| ||||||||||||||| ||||| ||||  |||| |||||||||| || ||    
T  6337722 ttttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacataaaagc 6337821  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||| ||||||||||||||||||    
T  6337822 ttatttatttacataagctctaaaataag 6337850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 48819419 - 48819291
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||| |||| ||||| |||||||| ||||||||||||||| ||||| ||||  |||| ||||||||||||| ||    
T  48819419 ttttatgttaattcataagttctcactaacaaaaaatgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacattaaagc 48819320  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    |  ||||||||||||||||| ||||||||    
T  48819319 tcatttatttgcataagctcaaaaataag 48819291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 4068235 - 4068117
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||| ||||| ||||  |||| |||||||||| || ||    
T  4068235 ttttatattaattcataagttctcactaacgaaaatagtatcttcataagttgttttttcataaactaccttgacaagcttatgaataatacataaaagc 4068136  T
Q  166 ttctttatttgcataagct 184  Q
    || |||||||||| |||||    
T  4068135 ttatttatttgcacaagct 4068117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 46263517 - 46263421
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaat 163  Q
    |||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||    
T  46263517 ttttatattaatttataagatcttattaac-aaaattgtatattcataagttgttttttcataaattaacctaacaaatttataaataatacattaat 46263421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 37329378 - 37329506
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| || |||||||||||||| |||||||| ||||||||||||||| ||||| |||| ||||| |||||||||| || ||    
T  37329378 ttttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagtttatgaataatacataaaagc 37329477  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    |  ||||||||||||| ||| ||||||||    
T  37329478 tcatttatttgcataatctcaaaaataag 37329506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 26988301 - 26988158
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| |||||||||||||||||||  ||    |||| |||||||||||| | |||||||||| |||||||| |||||||| ||||||||||||    
T  26988301 cttatgaaaaatagtttatgcaaataaattagctt----ttatgttaattcataagtttttactaacgacaattgtatcttcataagctgttttttcata 26988206  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttg 176  Q
    ||| ||||| ||||  |||| ||||| |||| || |||| ||||||||    
T  26988205 aactaccttgacaagcttatgaataagacataaaagcttatttatttg 26988158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 35282560 - 35282678
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| | | |||||  |||||| ||| |||||||||||||||||||||||| |||||||||  ||||||||||||| || || ||    
T  35282560 ttttatattaattcataagttttcactaattaaaattttatcttcataagttgttttttcataaactaccttaacatgtttataaataataaataaacgc 35282659  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  35282660 ttatttatttgcataagct 35282678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 15515320 - 15515441
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| ||||||||||||||||| |||||||| | ||||||||||||| ||||| ||||  |||| |||||||||| || |||| ||||    
T  15515320 ttaattcataagttctcactaacgaaaattgtatcttcataagctcttttttcataaactaccttgacaagcttatgaataatacataaaagcttattta 15515419  T
Q  173 tttgcataagctctaaaataag 194  Q
    || |||||| ||| ||||||||    
T  15515420 ttagcataaactcaaaaataag 15515441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 45267586 - 45267457
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttg-ttttttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    |||||| || ||||||||| ||||||||||||||||||||| |||||||| || ||||||||||||| ||||| ||||  | |||||||||||   || |    
T  45267586 ttttatgtttattcataagttcttactaacgaaaattgtatcttcataagctgtttttttcataaactaccttgacaagctaataaataatactaaaaag 45267487  T
Q  165 cttctttatttgcataagctctaaaataag 194  Q
    ||| ||||||||||||||||| ||||||||    
T  45267486 cttatttatttgcataagctcaaaaataag 45267457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 13039107 - 13038954
Alignment:
Q  22 ttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttt 121  Q
    |||| ||||||||||||| || |||||||||||||| |    | |||||| |||||||||||  ||| ||||||||||| | ||| ||||||||||||||    
T  13039107 ttttgaacttatgaaaaatagcttatgcaaataaataa----acttttatattaattcataacttctcactaacgaaaactttatcttcataagttgttt 13039012  T
Q  122 tttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcat 179  Q
    |||||||||| ||||||||||  | || ||||||| || || |||| |||||||||||    
T  13039011 tttcataaactaccttaacaagctcatgaataatatataaaagcttatttatttgcat 13038954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 37148092 - 37148177
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||||||| |||  |||||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  37148092 aaaattgtatattcataggtt--tttttcataaactaccttaacatacttataaataatacattaatgcttatttatttgcataagct 37148177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 37712220 - 37712073
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||| |||||| || |||||||||||||| |    | |||||| |||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  37712220 cttacgaaaaatagcttatgcaaataaataa----acttttatgttaattcataagttcttactaacgaaagttgtatcttcataagttgttttttcata 37712125  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||| ||||| ||||  |||| ||| |||||| || |||| || ||||||||||    
T  37712124 aactaccttgacaagcttatgaat-atacataaaagcttattcatttgcataa 37712073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 3069820 - 3069938
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||||  ||||||||||| |||||||| ||||||||||||||| ||||| ||||  |||| ||||||||||||| ||    
T  3069820 ttttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacattaaagc 3069919  T
Q  166 ttctttatttgcataagct 184  Q
    ||  ||||||| |||||||    
T  3069920 ttacttatttgtataagct 3069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 3116028 - 3116145
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||| ||||||| || |||| ||       
T  3116028 ttttattttaatttataagatcttactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaacttataaacaaaacataaaaat 3116126  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  3116127 ttatttatttgcataagct 3116145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 32497238 - 32497355
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| |||||||||||||||||  ||||||  ||||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  32497238 ttttattttaatttataagctctcactaacgaaaattgtatcctcataaactgttttttcataaactaccttaa-aaacttataaataatacataaaaac 32497336  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  32497337 ttatttatttgcataagct 32497355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 35590243 - 35590134
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| ||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||  |||| ||  |||||| || |||| ||||    
T  35590243 ttaattcataagttctcactgacgaaaattgtatcttcataagctgttttttcataaacaaccttgacaagcttatgaactatacataaaagcttattta 35590144  T
Q  173 tttgcataag 182  Q
    ||||||||||    
T  35590143 tttgcataag 35590134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 185
Target Start/End: Original strand, 36422971 - 36423066
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctc 185  Q
    |||||||||| || ||| |||||||||||||| ||||||||| ||||||||||| |||| ||||||| || || |||| |||||||||||||||||    
T  36422971 actaacgaaatttttatcttcataagttgtttattcataaactaccttaacaaacttatgaataataaataaaagcttatttatttgcataagctc 36423066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 26543111 - 26542977
Alignment:
Q  44 ttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaa 143  Q
    |||||||||||||| ||||| |    ||||||| | ||||| | | ||||||||||||||||  ||| |||||||||||||||||||| || ||||||||    
T  26543111 ttatgcaaataaataaatttta----atcttaacttataagttttcactaacgaaaattgtactttcttaagttgttttttcataaactacattaacaaa 26543016  T
Q  144 tttataaataatacattaatgcttctttatttgcataag 182  Q
     ||||| ||||||||| || || | ||||||||||||||    
T  26543015 cttatatataatacataaaagcatatttatttgcataag 26542977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 9572750 - 9572869
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat-taatg 164  Q
    |||||| |||||||||||| ||| |||||| |||| | ||| ||||||| |||||||||||||||| ||||||||||| |||| ||||||| ||  || |    
T  9572750 ttttatattaattcataagttctcactaacaaaaactttatcttcataaattgttttttcataaactaccttaacaaacttatgaataataaataaaaag 9572849  T
Q  165 cttctttatttgcataagct 184  Q
    ||| |||||||||| |||||    
T  9572850 cttatttatttgcaaaagct 9572869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 17628391 - 17628508
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| | ||| ||| ||||||||||||||||| |||||||   |||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  17628391 ttttattttaatttagaagctctcactaacgaaaattgtatcttcataaacggttttttcataaactaccttaa-aaacttataaataatacataaaaac 17628489  T
Q  166 ttctttatttgcataagct 184  Q
    || |||||||| |||||||    
T  17628490 ttatttatttgtataagct 17628508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 26435108 - 26435258
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| |||||||||||||||||  | |||    ||| |||||||||||| ||| | ||||||||| ||||| |||||||   |||||||||||    
T  26435108 cttatgaaaaatagtttatgcaaataaatagactta----tatgttaattcataagttctcagtaacgaaaaatgtatcttcataaacagttttttcata 26435203  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| || || ||||| ||| |||||||||| |||  ||| ||||||||||||||||    
T  26435204 aactactttgacaaacttaaaaataataca-taaaacttatttatttgcataagct 26435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 1005453 - 1005332
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| |||| | |||||||||| ||||||||| |||||||||| ||| ||||  ||||  |||| |||||||| | || |||| ||||    
T  1005453 ttaattcataagttctcactatcaaaaattgtatcttcataagtagttttttcattaactacctagacaagcttatgaataatacgtaaaagcttattta 1005354  T
Q  173 tttgcataagctctaaaataag 194  Q
    ||||||||||||  ||||||||    
T  1005353 tttgcataagcttaaaaataag 1005332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 10082371 - 10082254
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtt-ttttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    |||||| |||||||||||| ||| || ||| |||| ||||| ||||||||||||| ||||||||||| ||||| ||||| |||| ||||| |||| ||      
T  10082371 ttttatattaattcataagttctcacgaaccaaaaatgtattttcataagttgtttttttcataaactaccttgacaaacttatcaataacacataaaaa 10082272  T
Q  165 cttctttatttgcataag 182  Q
    ||| ||||||||||||||    
T  10082271 cttatttatttgcataag 10082254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 46689518 - 46689631
Alignment:
Q  68 ttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgctt 167  Q
    |||| |||||||||||| ||| ||||||||||||| ||| ||||||||||||||| | |||||  ||||||||||  | || ||||||| || || ||||    
T  46689518 ttatattaattcataagttctcactaacgaaaattttattttcataagttgttttattataaaataccttaacaagctcatgaataataaataaaagctt 46689617  T
Q  168 ctttatttgcataa 181  Q
     |||||||||||||    
T  46689618 ttttatttgcataa 46689631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 15632024 - 15631908
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||| | ||| ||||||||||||||||| |||||||   |||||||||||||  || |||||||| ||||||||||||||| ||  |    
T  15632024 ttttattttaatttatatgctctcactaacgaaaattgtattttcataaacagttttttcataaaatacattaacaaacttataaataatacataaaaac 15631925  T
Q  166 ttctttatttgcataag 182  Q
    || |||||||| |||||    
T  15631924 ttatttatttgtataag 15631908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 16888932 - 16889042
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||| ||||||  ||| ||||| ||||||||||| |||||||| ||||||||||||||| ||||| ||||  |||| |||||||||| || ||    
T  16888932 ttttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctgttttttcataaactacctt-acaagcttatgaataatacataaaagc 16889030  T
Q  166 ttctttatttgc 177  Q
    || |||||||||    
T  16889031 ttatttatttgc 16889042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 46473215 - 46473096
Alignment:
Q  65 attttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    ||||||| |||||||||||| ||||| ||||||||| | ||| ||||||||||||||||||||| || ||||||| ||  | || ||||||| || || |    
T  46473215 attttatattaattcataagttcttattaacgaaaactttatcttcataagttgttttttcatatactaccttaaaaacctcatgaataataaataaaag 46473116  T
Q  165 cttctttatttgcataagct 184  Q
    ||| ||||||| || |||||    
T  46473115 cttatttatttacacaagct 46473096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 12256726 - 12256637
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    |||||| |||||||||||| ||||||||||||||||||||  ||||||| ||| |||||||||||| || | |||||  ||||||||||||    
T  12256726 ttttattttaattcataagttcttactaacgaaaattgtaccttcataaattg-tttttcataaactacatcaacaatcttataaataata 12256637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 26946094 - 26946188
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat-taatgcttctttatttgcataagc 183  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||  |||| ||||| ||||  || |||| ||||||| |||||||    
T  26946094 actaaggaaaattgtatcttcataagttgttttttcataaactaccttaacaagcttatgaataacacataaaaagcttatttatttacataagc 26946188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 5243396 - 5243487
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||||| |||||||  | ||||||||||||| ||||||| ||| ||||||||||||||  ||  ||| ||||||||||||||||    
T  5243396 taacgaaaattgtatcttcataaactattttttcataaactaccttaa-aaacttataaataatacacaaaaacttatttatttgcataagct 5243487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 25485908 - 25485795
Alignment:
Q  22 ttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttt 121  Q
    |||| ||||||||| |||||| |||||||||||||| |||||    |||| |||||| ||||  | | |||| |||||||| ||| ||||||| ||||||    
T  25485908 ttttgaacttatgagaaagagcttatgcaaataaataaattt----ttatattaatttataaattttcactagcgaaaattttatcttcataaattgttt 25485813  T
Q  122 tttcataaacaaccttaa 139  Q
    |||||||||| |||||||    
T  25485812 tttcataaactaccttaa 25485795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 41196677 - 41196769
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    ||||| |||||||| ||| ||| |||||| |||||||||| |||||||| ||||||||||||||| || || ||||  |||| ||||||||||    
T  41196677 tttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactacattgacaagcttatgaataatacat 41196769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 49971347 - 49971255
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||||||||||||||||| ||| |||| ||||||||||||||| || |||||||  |||||||||||| || || |  | ||||||||||||||    
T  49971347 actaacgaaaattgtatcttcgtaagctgttttttcataaactacattaacaagcttataaataataaataaaggaatatttatttgcataag 49971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 18327617 - 18327526
Alignment:
Q  93 aacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||||||||| | |||||||| ||||||||||||||| | ||| ||||  |||| | |||||||| || |||| ||||||||||||||||    
T  18327617 aacgaaaattgtgtgttcataagctgttttttcataaactatcttgacaagcttatgagtaatacataaaagcttatttatttgcataagct 18327526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 15235127 - 15235244
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| |||||||||||||||| || | |||||||   ||||||||||||||   ||||| ||| ||||||||||||||| ||  |    
T  15235127 ttttattttaatttataagctcttactaacgaaaatggtttcttcataaaccgttttttcataaactgtcttaa-aaacttataaataatacataaaaac 15235225  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||| ||||||||    
T  15235226 ttatttatttacataagct 15235244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 15791503 - 15791386
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| | ||||||||||||||| ||||| |    ||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  15791503 ttttattttaatttataagctctcattaacgaaaattgtatcttcattaacgattttttcataaactaccttaa-aaacttataaataatacataaaaac 15791405  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||| ||||||||    
T  15791404 ttatttatttacataagct 15791386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 17814310 - 17814193
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||  ||||| ||| ||||||||||||||||| |||||||    ||||||||||||| ||||||| ||| ||||||||||||||| ||       
T  17814310 ttttattttaatctataagttctgactaacgaaaattgtattttcataacccattttttcataaactaccttaa-aaacttataaataatacataaaaat 17814212  T
Q  166 ttctttatttgcataagct 184  Q
     | ||||||||||||||||    
T  17814211 gtatttatttgcataagct 17814193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 20169352 - 20169266
Alignment:
Q  98 aaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||||||||| ||||  ||||||||||||||| |  || | ||| ||||||||||||||| || |||| ||||||||||||||||    
T  20169352 aaattgtatatttataaactgttttttcataaactatatttaaaaacttataaataatacataaaagcttatttatttgcataagct 20169266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 28122716 - 28122618
Alignment:
Q  86 tcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||||||| ||| || ||||||| ||||||||||||| ||||||| ||  | || ||||||| || || |||  ||||||||||||||||    
T  28122716 tcttactaacgaaaattttatctttataagttattttttcataaactaccttaagaagctcatgaataataaataaaagctaatttatttgcataagct 28122618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 42591535 - 42591412
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||| |||||||| | |    |||||| |||||| ||||| | | ||||||||||| ||||| |||||||  | ||||||||||    
T  42591535 cttatgaaaaatagcttatgtaaataaataagt----ttttattttaatttataagctttcactaacgaaaagtgtatcttcataaactattttttcata 42591440  T
Q  129 aacaaccttaacaaatttataaataata 156  Q
    ||  ||||||||||| ||||||||||||    
T  42591439 aaataccttaacaaacttataaataata 42591412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 35275864 - 35275956
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| |||| |||| ||||||||||||||||||||| |||   | |||||||||||| ||||||| ||  |||||||||||||||    
T  35275864 ttttattttaatttataaaatctcactaacgaaaattgtatattcctaaacaggtttttcataaactaccttaa-aatcttataaataatacat 35275956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 10365290 - 10365176
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| | ||| | |||||||||||||||||||||||||  |||| |||||||||||| || || ||||  |||| |||||||||| || |     
T  10365290 ttttatgttaatttaaaagtttttactaacgaaaattgtatattcatcggttg-tttttcataaactactttgacaagcttattaataatacataaaagt 10365192  T
Q  166 ttctttatttgcataa 181  Q
    || || ||||||||||    
T  10365191 ttattcatttgcataa 10365176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 45179028 - 45179090
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataat 155  Q
    |||||||||||||||||| ||||||| ||||||||||||| |  |||| |||||||||||||||    
T  45179028 taacgaaaattgtatatttataagttattttttcataaacta-tttaataaatttataaataat 45179090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 13412426 - 13412511
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| ||||| ||| |||||| ||| |||||| ||||| | | |||||||||||||| ||||||| ||| |||||||||||||||    
T  13412426 ttaatttataagctctcactaacaaaatttgtatcttcatgaatggttttttcataaactaccttaa-aaacttataaataatacat 13412511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 47881022 - 47880984
Alignment:
Q  22 ttttcaacttatgaaaaagagtttatgcaaataaattaa 60  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  47881022 ttttgaacttatgaaaaagagtttatgcaaataaattaa 47880984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 1683875 - 1683944
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaa 143  Q
    ||||||||||| |||| |||||||||||||||  || ||||  ||||||||||||||| ||||| |||||    
T  1683875 taattcataagttcttgctaacgaaaattgtagttttataaactgttttttcataaactaccttgacaaa 1683944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 5347274 - 5347182
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||  ||||| ||| | ||||||||||||||| |||||||    ||||||||||||| ||||||| ||| |||||||||||||||    
T  5347274 ttttattttaatctataagttctgattaacgaaaattgtattttcataacccattttttcataaactaccttaa-aaacttataaataatacat 5347182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 19220326 - 19220201
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| ||||||||||||||||| |  ||    |||| |||||| ||||  ||| | || ||||||||| || ||||||| | |||||||||||    
T  19220326 cttatgaaaaatagtttatgcaaataaataagctt----ttattttaatttataatctctcattatcgaaaattgcatcttcataaatagttttttcata 19220231  T
Q  129 aacaaccttaacaaatttataaataatacat 159  Q
    ||| ||||||| |||  ||||||||||||||    
T  19220230 aactaccttaa-aaacctataaataatacat 19220201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 22103229 - 22103138
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||  ||||| ||| ||||||||||||||||| |||||||  |  |||||||||||| ||||||| ||| |||||||||||||||    
T  22103229 ttttattttaatctataagttctaactaacgaaaattgtattttcataa-ctcatttttcataaactaccttaa-aaacttataaataatacat 22103138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 31378724 - 31378845
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||| ||||| | |||||||| |||||||||| || ||||    ||||||||||||| ||||| ||||  || | ||||||| || || |||| ||||    
T  31378724 ttaatttataagtttttactaacaaaaattgtatctttataaacgtttttttcataaactaccttgacaagcttgttaataatatataaaagcttattta 31378823  T
Q  173 tttgcataagctctaaaataag 194  Q
    ||||||||||||  ||||||||    
T  31378824 tttgcataagcttaaaaataag 31378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 16225620 - 16225514
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||| ||||| ||| |||||||||| | |||| |||||||||||||||||| ||||  |||||||| || |||||| |||||||| ||  ||| ||||    
T  16225620 ttaatttataagttctcactaacgaaact-gtatcttcataagttgttttttcctaaattaccttaac-aacttataattaatacataaaaacttattta 16225523  T
Q  173 tttgcataa 181  Q
    ||| |||||    
T  16225522 tttacataa 16225514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 50919581 - 50919517
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    ||||||||||||||| |||||||  |||||||| |||||| || || ||||| ||||||||||||    
T  50919581 taacgaaaattgtatcttcataacctgtttttttataaactacattgacaaacttataaataata 50919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 8061943 - 8062071
Alignment:
Q  30 ttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttt-----tt 124  Q
    |||||||||| || ||||| |||||||| |||||    |||| |||||| ||||| ||| || || ||||||||||| ||||||| || ||||     ||    
T  8061943 ttatgaaaaataggttatgtaaataaataaattt----ttattttaatttataagctctcacaaatgaaaattgtatcttcataaattattttttttctt 8062038  T
Q  125 cataaacaaccttaacaaatttataaataatac 157  Q
    ||||||  ||||||||||| |||||||||||||    
T  8062039 cataaaataccttaacaaacttataaataatac 8062071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 12973101 - 12973050
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttat 148  Q
    |||||||||| |||||||||||||||||||||||  || ||||||| |||||    
T  12973101 aaaattgtattttcataagttgttttttcataaatcacattaacaagtttat 12973050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 41130115 - 41129996
Alignment:
Q  65 attttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    ||||||| ||||||| |||| |   ||||| ||||||||||| |||||||||||||||  ||||||| ||||  | ||  |||| |||||||||| ||      
T  41130115 attttatgttaattcttaagtttgcactaatgaaaattgtatcttcataagttgttttgacataaaccacctagagaagcttatgaataatacataaaaa 41130016  T
Q  165 cttctttatttgcataagct 184  Q
    ||| ||||||| ||||||||    
T  41130015 cttttttatttacataagct 41129996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 391295 - 391232
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||||||||| |||  |||||||||||||||| ||| ||  ||||||||||||||||    
T  391295 ttttatgttaattcataagttctcgctaacgaaaattgtatcttcgta--ttgttttttcataaac 391232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 49738274 - 49738324
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttt 123  Q
    |||||||||||| ||| ||||||||||||||||| ||||||| || |||||    
T  49738274 ttaattcataagttctcactaacgaaaattgtattttcataaatttttttt 49738324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 14461007 - 14461072
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||| ||||| ||| ||||| ||||||||||| || ||||  |||||||||||||||    
T  14461007 ttttatgttaatttataagttctcactaatgaaaattgtatctttataaactgttttttcataaac 14461072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 19284994 - 19284898
Alignment:
Q  90 actaacgaaaattgtatattcataagttg--ttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||||||| |||||||  ||  |||||| |||||  | ||||||||| ||||||||||||||| |  |||| |||||||  |||||||    
T  19284994 actaacgaaaattgtatcttcataaactgtttttttttataaaatatcttaacaaacttataaataatacataatagcttatttatttatataagct 19284898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 23544880 - 23544819
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataataca 158  Q
    |||| ||||| |||||||| ||||||||||||||| ||||| ||||  |||| |||||||||    
T  23544880 aaaaatgtattttcataagctgttttttcataaactaccttgacaagcttatgaataataca 23544819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 28870261 - 28870216
Alignment:
Q  149 aaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||||||||||| |||| || ||||||||||||||||| ||||||||    
T  28870261 aaataatacataaatgtttatttatttgcataagctcaaaaataag 28870216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 38781198 - 38781133
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||||||||| ||| |||||| ||||||||   |||||||| || ||||||||||||    
T  38781198 ttttatgttaattcataagttctcactaaccaaaattgtggcttcataagctgatttttcataaac 38781133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 41003507 - 41003391
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacctta-acaaatttataaataatacattaatg 164  Q
    |||||| |||||| ||||| ||| |||||  |||||| ||| ||  |||| ||||||| ||||||| |||||  ||||| ||||||||||||||| ||      
T  41003507 ttttatgttaattaataagttctcactaataaaaattatatcttagtaagctgttttt-cataaactacctttgacaaacttataaataatacataaaaa 41003409  T
Q  165 cttctttatttgcataag 182  Q
    ||| ||||||||||||||    
T  41003408 cttatttatttgcataag 41003391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 319
Target Start/End: Complemental strand, 47886247 - 47886195
Alignment:
Q  267 ttataagataaagcatatca-ggaaagattttgaaattcatagccactattcaa 319  Q
    |||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||    
T  47886247 ttataagataaaacatatcaaggaaagattt-gaaattcttagccactattcaa 47886195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 18317120 - 18317032
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataat 155  Q
    ||||| || ||||||||| ||| | ||||||| ||||||| |||||| | ||||||||||||| | ||||| ||||  |||| ||||||    
T  18317120 tttatgttgattcataagttctcattaacgaatattgtatcttcataggatgttttttcataacctaccttgacaatcttatgaataat 18317032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 47886037 - 47885997
Alignment:
Q  363 ggaaaaactttgcaacatttacttgataattgaaagtaagt 403  Q
    ||||| ||||||||||||||||||| |||||||| ||||||    
T  47886037 ggaaagactttgcaacatttacttggtaattgaaggtaagt 47885997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 22397236 - 22397398
Alignment:
Q  27 aacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttca 126  Q
    |||||||||||||||||||| |||||||| ||||  |   ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22397236 aacttatgaaaaagagtttacgcaaataa-ttaagct---tttaagttaattcataagatcttactaacgaaaattgtatattcataagttgttttttca 22397331  T
Q  127 taaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataa 193  Q
    ||||| ||||||||| | |||||||||||||||||||  || |||||||| ||||||||||||||||    
T  22397332 taaactaccttaacagacttataaataatacattaatatttatttatttgtataagctctaaaataa 22397398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 2702681 - 2702799
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||| |||| |    
T  2702681 ttttatgttaattcataagatcttactaatgaaaattgtatattcataagttgtcttttcattaactaccttaacaaacttataaataatacactaatac 2702780  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||| ||||||||||    
T  2702781 ttatttatgtgcataagct 2702799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 194
Target Start/End: Original strand, 43983317 - 43983476
Alignment:
Q  33 tgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaaca 132  Q
    ||||||||||||||| ||||||| | |  ||  |||| | |||||| ||||||| ||| ||||||||||||||| || |||||||||||||| ||||||     
T  43983317 tgaaaaagagtttattcaaataattaagctt--ttttttgttaatttataagattttattaacgaaaattgtatgtttataagttgtttttttataaact 43983414  T
Q  133 accttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    | ||||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  43983415 atcttaacaagcttataaataatacattaatgcttatttatttgtataagctctaaaataag 43983476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 26206288 - 26206449
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| |||| ||||||||     | |||||||| |||||| ||||| |||||||||||||||| ||| ||||||||  ||||||||||||    
T  26206288 cttatgaaaaagagcttatccaaataaa-----taaattttattttaatttataagttcttactaacgaaaatagtacattcataaactgttttttcata 26206382  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataaga 195  Q
    ||| || |||||||  ||||||||||||||| ||  | | ||||||||||||| |||||||||||||    
T  26206383 aactacgttaacaatcttataaataatacataaagacatatttatttgcataaactctaaaataaga 26206449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 47202945 - 47202828
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||||||| ||||||||||||||||| ||||||| | |||||||||||||| ||||||| |||||||||| |||||||| ||  |    
T  47202945 ttttattttaatttataagatctcactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaatttataagtaatacataaaaac 47202847  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  47202846 ttatttatttgcataagct 47202828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 2141747 - 2141633
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcat 179  Q
    ||||| ||||||||| ||||||||||| |||||||  |||||||| ||||   ||||||||||| |||||||||| |||| || |||| |||||||||||    
T  2141747 ataagctcttactaatgaaaattgtatcttcataaactgtttttttataatataccttaacaaagttataaataacacataaaagcttatttatttgcat 2141648  T
Q  180 aagctctaaaataag 194  Q
    |||||||||||||||    
T  2141647 aagctctaaaataag 2141633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 184
Target Start/End: Original strand, 46175946 - 46176062
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgct 166  Q
    ||||| |||||| ||||| |||||||| |||||||||||| |||||||  | ||||||||||||| ||||||| ||||||||||||||||||| ||  ||    
T  46175946 tttattttaatttataagctcttactagcgaaaattgtatcttcataaactattttttcataaactaccttaa-aaatttataaataatacataaaaact 46176044  T
Q  167 tctttatttgcataagct 184  Q
    | ||||||||||||||||    
T  46176045 tatttatttgcataagct 46176062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 7148884 - 7148764
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttat 173  Q
    ||||||||||| ||| ||||| ||||||||||| || ||||| |||||||||| |||| ||||| ||||  |||| |||||||||| || |||| |||||    
T  7148884 taattcataagttctgactaaagaaaattgtatttttataagctgttttttcaaaaactaccttgacaagcttatgaataatacataaaagcttatttat 7148785  T
Q  174 ttgcataagctctaaaataag 194  Q
    |||||||||||| ||||||||    
T  7148784 ttgcataagctcaaaaataag 7148764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 29877759 - 29877644
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||| |||||||||| |||||||| || |||||||||||| |||||| |||  |||| |||||||||| || ||    
T  29877759 ttttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgctttttcataaactaccttagcaagcttatgaataatacataaaagc 29877660  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  29877659 ttatttatttgcataa 29877644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 41229056 - 41228933
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||||||||||||||  ||    |||| |||||||||||| ||| ||||| ||||||||||| ||||| |||||||||||||||    
T  41229056 cttatgaaaaatagcttatgcaaataaattagctt----ttatattaattcataagttctaactaatgaaaattgtatcttcatcagttgttttttcata 41228961  T
Q  129 aacaaccttaacaaatttataaataata 156  Q
    ||| ||||||||||  |||| |||||||    
T  41228960 aactaccttaacaagcttatgaataata 41228933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 4603298 - 4603413
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||  ||| ||||||||||||||||| |||||||  ||||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  4603298 ttttattttaatttataaactctcactaacgaaaattgtatcttcataaactgttttttcataaactaccttaa-aaaattataaataatacataaaaac 4603396  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  4603397 ttatttatttgcataag 4603413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 15184666 - 15184549
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||  ||||||||||||||| || |||| ||| ||||||||||||||| ||  |    
T  15184666 ttttattttaatttataagttctcactaacgaaaattgtatcttcataaactgttttttcataaactactttaa-aaaattataaataatacataaaaac 15184568  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||| ||||||||    
T  15184567 ttatttatttacataagct 15184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 17222982 - 17222856
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || |||| ||||||||| | |    |||||| |||||||||||| ||| ||||||||||||||||| |||||||  ||||||||||||    
T  17222982 cttatgaaaaatagcttattcaaataaataagt----ttttatgttaattcataagttctaactaacgaaaattgtatcttcataatctgttttttcata 17222887  T
Q  129 aacaaccttaacaaatttataaataatacat 159  Q
    ||| ||||| ||||  |||| ||||||||||    
T  17222886 aactaccttgacaagcttatgaataatacat 17222856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 48591397 - 48591518
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| | ||||||||||||||| |||||||| ||||||||||||||| ||||| ||||   ||| ||||||| || ||  ||| ||||    
T  48591397 ttaattcataagttctcattaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcgtatgaataatatataaaaacttattta 48591496  T
Q  173 tttgcataagctctaaaataag 194  Q
    |||||||||||||  |||||||    
T  48591497 tttgcataagctcagaaataag 48591518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 185
Target Start/End: Complemental strand, 897131 - 896971
Alignment:
Q  21 tttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtt 120  Q
    ||||| ||||||||||||| ||||||||||||||||| |  ||    |||| |||||| ||||| | | |||||||||||| |||| | | ||| |||||    
T  897131 ttttttaacttatgaaaaatagtttatgcaaataaataagctt----ttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattgtt 897036  T
Q  121 ttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctc 185  Q
    ||||||||||| || || ||||  |||| |||||||||| || | || |||||||||||||||||    
T  897035 ttttcataaactacattgacaagcttatgaataatacataaaagtttatttatttgcataagctc 896971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 52274100 - 52274214
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcat 179  Q
    ||||| ||| ||| ||||||||||||| |||||||| ||||||||| ||||| ||||| | ||  |||| |||||||||| || | || |||||||||||    
T  52274100 ataagttctcactgacgaaaattgtatcttcataagctgttttttcgtaaactaccttgataagcttatcaataatacataaaagtttatttatttgcat 52274199  T
Q  180 aagctctaaaataag 194  Q
    |||||| ||||||||    
T  52274200 aagctcaaaaataag 52274214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 488350 - 488478
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||  |||||||||| || | |||   ||||||||||||| ||||| ||||  |||| |||||||||| || ||    
T  488350 ttttatgttaattcataagttctcactaataaaaattgtatctttacaagcaattttttcataaactaccttgacaagcttattaataatacataaaagc 488449  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    ||  |||||||||||||||| ||||||||    
T  488450 ttacttatttgcataagctcaaaaataag 488478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 18630861 - 18630937
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaa 142  Q
    |||||| |||||||||||| ||| ||||||||||| | ||| |||||||| ||||||||||||||| ||||||||||    
T  18630861 ttttatattaattcataagttctcactaacgaaaactttatcttcataagctgttttttcataaactaccttaacaa 18630937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 184
Target Start/End: Complemental strand, 23297547 - 23297440
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttat 173  Q
    ||||||||||| |||  ||||| |||||||||| |||||||| |||||   ||||||| ||||| ||||| |||| |||||||||| || |||| |||||    
T  23297547 taattcataagttctcgctaacaaaaattgtatcttcataagctgttt---cataaactaccttgacaaacttatgaataatacataaaagcttatttat 23297451  T
Q  174 ttgcataagct 184  Q
    |||||||||||    
T  23297450 ttgcataagct 23297440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 28074459 - 28074368
Alignment:
Q  91 ctaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagc 183  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||| ||||  |||| |||||||||| || |||| |||||||||||||||    
T  28074459 ctaacgaaaattgtatcttcataagct-ttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataagc 28074368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 39932752 - 39932836
Alignment:
Q  98 aaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||||||||| ||||||| ||||||||||||| || ||||||||||  ||||||||||||||| || | || ||||||||||||||    
T  39932752 aaattgtatcttcataaattgttttttcatacactaccttaacaatcttataaataatacataaaagtttatttatttgcataag 39932836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 46704236 - 46704312
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaa 142  Q
    |||||| |||||||||||| ||| ||||| ||||||| ||| |||||||| ||||||||||||||| ||||||||||    
T  46704236 ttttatattaattcataagttctcactaatgaaaattttatcttcataagctgttttttcataaactaccttaacaa 46704312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 18424244 - 18424358
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| | | | |||| |||||||||| ||||||| ||||||| |||||||| ||||| |||| ||||| |||||||||| || ||    
T  18424244 ttttatgttaattcataagttttcaataacaaaaattgtatcttcataaattgtttt-tcataaactaccttcacaagtttatgaataatacataaaagc 18424342  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||| ||||    
T  18424343 ttatttatttgtataa 18424358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 23335762 - 23335643
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||| | ||||||||||| |||||||| ||||||||||||||| ||||| | |   |||| |||||||||| ||  |    
T  23335762 ttttatgttaattcataagttctcacttatgaaaattgtatcttcataagctgttttttcataaactaccttgatatgcttatgaataatacataaaatc 23335663  T
Q  166 ttctttatttgcataagctc 185  Q
    |  |||||||||||||||||    
T  23335662 tcatttatttgcataagctc 23335643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 19725413 - 19725295
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||| ||||||| ||| ||||||   ||||||||||||||  ||||||||||| ||||||||||||||| ||  |    
T  19725413 ttttattttaatttataagctctcactaatgaaaattatatcttcatagactgttttttcataaaataccttaacaaacttataaataatacataaaaac 19725314  T
Q  166 ttctttatttgcataagct 184  Q
     | |||| |||||||||||    
T  19725313 gtatttaattgcataagct 19725295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 38345788 - 38345905
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||  ||||  |||||||||| |||||||||||||||||||||||| || || || || |||| |||| ||||| || ||    
T  38345788 ttttatgttaattcataagttctggctaataaaaattgtatcttcataagttgttttttcataaactactttgac-aacttatgaatactacataaaagc 38345886  T
Q  166 ttctttatttgcataagct 184  Q
    || |||||||| |||||||    
T  38345887 ttatttatttggataagct 38345905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Complemental strand, 7396434 - 7396354
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcat 112  Q
    ||||||||||| || |||||||||||| | |||||   ||||| |||||||||||||| || ||||||||||||||||||||||    
T  7396434 cttatgaaaaatagcttatgcaaataattaaattt---tttatgttaattcataagatttttctaacgaaaattgtatattcat 7396354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 948186 - 948074
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgtttttt-cataaacaaccttaacaaatttataaataatacattaatgcttcttt 171  Q
    |||||||||||| |||  || || |||||||||| || ||||| |||||||| ||||||| ||||| ||||| |||| |||||||||| || |||| |||    
T  948186 ttaattcataagttctctctgacaaaaattgtatctttataagctgtttttttcataaactaccttgacaaagttatgaataatacataaaagcttattt 948087  T
Q  172 atttgcataagct 184  Q
    |||| ||||||||    
T  948086 attttcataagct 948074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 33534048 - 33533932
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||| |||||||| ||| ||||||||||||||||||||| |  | ||||||||||||||| ||||| || || |||| |||||||| || | ||    
T  33534048 ttttatgttagttcataagttctcactaacgaaaattgtatattcgtgggctgttttttcataaactaccttgactaacttatgaataataccttgaagc 33533949  T
Q  166 ttctttatttgcataag 182  Q
    || |  |||||||||||    
T  33533948 ttataaatttgcataag 33533932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 55638047 - 55638174
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||| | ||||||| || ||||  ||||||||||||||| |  || ||||| |||| |||||||||| || ||    
T  55638047 ttttatgttaatttataagttctcactaacggagattgtatctttataaactgttttttcataaactatatttacaaacttatgaataatacataaaagc 55638146  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||||||||| || |||||||||    
T  55638147 ttgtttatttgcataaact-taaaataag 55638174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 22303191 - 22303101
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||||| ||||||||||| ||||||| | |||||||||||||| | | ||| ||||||||||||||||||| ||  ||| |||||||||||||    
T  22303191 actaatgaaaattgtatcttcataaatggttttttcataaacta-cgtaaaaaatttataaataatacataaaaacttatttatttgcataa 22303101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 22273933 - 22273830
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||| |||||| || |||||||||||||| |    | |||||| |||||||||||  ||| |||||| |||||||||| |||||||| ||||||||||||    
T  22273933 cttacgaaaaatagattatgcaaataaataa----acttttatgttaattcataacttctcactaacaaaaattgtatcttcataagctgttttttcata 22273838  T
Q  129 aacaacct 136  Q
    ||| ||||    
T  22273837 aactacct 22273830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 36741014 - 36740896
Alignment:
Q  76 attcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttattt 175  Q
    ||||||||| ||| ||||| ||||||||||| ||||| |  ||| ||||||||||| || || ||||  ||||  |||||| || || |||| |||||||    
T  36741014 attcataagttctcactaatgaaaattgtatcttcatgaactgtattttcataaactactttgacaagcttatgcataatatataaaagcttatttattt 36740915  T
Q  176 gcataagctctaaaataag 194  Q
    |||||||||| ||||||||    
T  36740914 gcataagctcaaaaataag 36740896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 39931510 - 39931603
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacatt 160  Q
    |||||| ||| || ||||| ||| ||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||  || |||||||||||||    
T  39931510 ttttattttattttataagctctcactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aagcttgtaaataatacatt 39931603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 52700524 - 52700626
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcat 179  Q
    ||||| |||||||||||||||| |||| |||||||  | ||||||||||||| || || ||||  ||||||||||||||| ||  ||| ||||||| |||    
T  52700524 ataagttcttactaacgaaaatcgtatcttcataaactattttttcataaaccacttttacaagcttataaataatacataaagacttatttatttacat 52700623  T
Q  180 aag 182  Q
    |||    
T  52700624 aag 52700626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 7206566 - 7206627
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaaca 141  Q
    ||||| ||| ||||||||||| | ||| |||||||||||||||||||||||| |||||||||    
T  7206566 ataagttctcactaacgaaaactttatcttcataagttgttttttcataaactaccttaaca 7206627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 12495610 - 12495730
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacc--ttaacaaatttataaataatacattaat 163  Q
    |||||| |||||| ||||| ||| ||||| ||| ||||||| || || || ||||||||||||||| |||  || ||||  |||| |||||||||| ||     
T  12495610 ttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagcttatgaataatacataaaa 12495709  T
Q  164 gcttctttatttgcataagct 184  Q
    |||| ||||||||||||||||    
T  12495710 gcttatttatttgcataagct 12495730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 42611835 - 42611950
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat-taatg 164  Q
    |||||| |||||||||||| | | |||| |||||| ||||| |||||||||||||||||||||||| | ||  ||||  |||| |||||||||| ||| |    
T  42611835 ttttatgttaattcataagttgtcacta-cgaaaactgtatcttcataagttgttttttcataaacta-ctcgacaagcttatgaataatacatataaag 42611932  T
Q  165 cttctttatttgcataag 182  Q
    ||| ||||||||||||||    
T  42611933 cttatttatttgcataag 42611950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 46650367 - 46650276
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||||||||||||||| | || ||||  | ||||||||||||| ||  | |||||||||| |||||||||| || |||| |||||||||||||    
T  46650367 actaacgaaaattgtttctttataaactattttttcataaactacaattacaaatttatgaataatacatgaaagcttatttatttgcataa 46650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 212956 - 213029
Alignment:
Q  108 ttcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||||||||||||||||||||||| ||||||||||  |||| ||||||| | |||  ||| ||||||||||||||    
T  212956 ttcataagttgttttttcataaactaccttaacaagcttatgaataata-aataaaacttatttatttgcataag 213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 15179937 - 15179820
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||  ||||| ||| ||||||||||||||||| |||||||    ||| ||||||||| ||||||| ||| ||||||||||||||| ||       
T  15179937 ttttattttaatctataagttctgactaacgaaaattgtattttcataatccatttcttcataaactaccttaa-aaacttataaataatacataaaaat 15179839  T
Q  166 ttctttatttgcataagct 184  Q
     | ||||||||||||||||    
T  15179838 atatttatttgcataagct 15179820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 35124483 - 35124389
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||| ||| |||||| |||||||| ||||||||||||||| ||||| ||||  |||| |||| ||||| || | || | ||||||||||||||    
T  35124483 actaacaaaatttgtatcttcataagctgttttttcataaactaccttgacaagcttatgaatagtacataaaaggttatatatttgcataagct 35124389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 42617196 - 42617313
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| | | ||||||||||||  ||| |||||||  | ||||||||||||| ||||||| ||| ||||||||||||| | ||  |    
T  42617196 ttttattttaatttataagttttcactaacgaaaatcatatcttcataaactattttttcataaactaccttaa-aaacttataaataatacttaaaaac 42617294  T
Q  166 ttctttatttgcataagct 184  Q
     | ||||||||||||||||    
T  42617295 gtatttatttgcataagct 42617313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 190
Target Start/End: Complemental strand, 825803 - 825678
Alignment:
Q  65 attttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    ||||||| |||||||||||| | | |||||| |||| ||||| ||||| || ||||||||||||||| | ||  |||   |||| ||||||| |  || |    
T  825803 attttatgttaattcataagctttcactaacaaaaaatgtatcttcatgagctgttttttcataaactaactagacaggcttatgaataatatagaaaag 825704  T
Q  165 cttctttatttgcataagctctaaaa 190  Q
    ||| ||||||||||||||||| ||||    
T  825703 cttatttatttgcataagctcaaaaa 825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 2547980 - 2548078
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||| |||||| |||||||||||||| | |    |||||| |||||| ||||| ||| | || |||||||| ||| ||||||| |||||||||||||    
T  2547980 cttatgagaaagagcttatgcaaataaataagt----ttttatattaatttataagttctcattagcgaaaattttatcttcataaattgttttttcata 2548075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 22117473 - 22117381
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||  ||||| ||| |||||||||||||| || |||||||    ||||||||||||| ||||||| ||| |||||||||||||||    
T  22117473 ttttattttaatctataagttctgactaacgaaaattgcattttcataacccattttttcataaactaccttaa-aaacttataaataatacat 22117381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 35405784 - 35405739
Alignment:
Q  86 tcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  35405784 tcttactaacgaaaattctatcttcataagctgttttttcataaac 35405739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 36255002 - 36255067
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||||||||| ||| |||||  |||||||||| |||||||| |||||||||| ||||    
T  36255002 ttttatgttaattcataagttctcactaattaaaattgtatcttcataagctgttttttcacaaac 36255067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 40699481 - 40699400
Alignment:
Q  65 attttatcttaattcataagatcttactaacgaaaattgtatattcataag----ttgttttttcataaacaaccttaacaa 142  Q
    ||||||| |||||||||||| ||| ||| ||||||| ||||| ||||||||    |||||||||||||||| ||||| ||||    
T  40699481 attttatgttaattcataagttctcacttacgaaaactgtatcttcataagatgtttgttttttcataaactaccttgacaa 40699400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 48721940 - 48721880
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttca 126  Q
    |||||| |||||||||||| ||| |||||| |||||| ||| |||||||||| ||||||||    
T  48721940 ttttatattaattcataagttctcactaacaaaaattatatcttcataagttattttttca 48721880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 10046326 - 10046260
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataataca 158  Q
    ||||||||||||||| |||||||  |||||||| |||||| || || |||| |||||| ||||||||    
T  10046326 taacgaaaattgtattttcataacctgtttttttataaactacattgacaagtttatagataataca 10046260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 31022519 - 31022457
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataa 129  Q
    |||| ||||||||||||| | | ||| ||||||||||||| || ||||| |||||||||||||    
T  31022519 tttaccttaattcataagttttcactgacgaaaattgtatctttataagctgttttttcataa 31022457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 45018619 - 45018577
Alignment:
Q  100 attgtatattcataagttgttttttcataaacaaccttaacaa 142  Q
    ||||||| |||||||||||||||||||||||| || |||||||    
T  45018619 attgtatcttcataagttgttttttcataaactactttaacaa 45018577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 11256627 - 11256684
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttt 123  Q
    |||||| |||||||||||| |||  ||||| |||||||||| |||||||| |||||||    
T  11256627 ttttatgttaattcataagttctcgctaactaaaattgtatcttcataagctgttttt 11256684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 27368145 - 27368234
Alignment:
Q  93 aacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||||| |||||||| || ||||  ||||||||||||| | || || ||||| |||| ||||||| || || |||| ||||||||||||||    
T  27368145 aacgataattgtatctttataaactgttttttcataagctacattgacaaacttatgaataatatataaaagcttatttatttgcataag 27368234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 4398198 - 4398262
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    ||||||||||| ||| |||||||    ||||||||||||| || |||| ||||||||||||||||    
T  4398198 taacgaaaattatatcttcataaccaattttttcataaactacattaaaaaatttataaataata 4398262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 194
Target Start/End: Complemental strand, 8601297 - 8601194
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaa 189  Q
    |||||| |||||||||| |||||||   |||||||||||||| || || |||   |||||||||||| |  || |||  ||||||||||||||||| |||    
T  8601297 actaacaaaaattgtatcttcataaccagttttttcataaactacattgacaggcttataaataatagaaaaaagctcatttatttgcataagctc-aaa 8601199  T
Q  190 ataag 194  Q
    |||||    
T  8601198 ataag 8601194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 23284757 - 23284805
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataa 114  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||    
T  23284757 ttttattttaatttataagctctcactaacgaaaattgtatcttcataa 23284805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 28663692 - 28663617
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaa 142  Q
    |||||| ||| |||||||| ||| | ||||||||||||||| |||| ||  ||||||||||||||| ||||| ||||    
T  28663692 ttttatgttagttcataagttctca-taacgaaaattgtatcttcagaatctgttttttcataaactaccttgacaa 28663617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 34633510 - 34633455
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttt 122  Q
    |||||| |||||||||||| ||| ||| | ||||||||||| |||||||||||||||    
T  34633510 ttttatgttaattcataagttctcacttatgaaaattgtat-ttcataagttgtttt 34633455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 38524241 - 38524080
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| |||||||||||||| |  ||    |||| ||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||    
T  38524241 cttatgaaaaagagcttatgcaaataaataagctt----ttatgttaattcataagatcttactaacgaaaattgcatattcataaatgattttttcata 38524146  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  38524145 aactaccttaacaaatttataaataatacattaatacttatttatttgcataaactctaaaataag 38524080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 30383918 - 30383773
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||| |||||||||||||||||||||||| | |    |||||| |||||||||||||   |||| | |||||||||||||||||| ||||||||||||||    
T  30383918 cttacgaaaaagagtttatgcaaataaataagt----ttttatgttaattcataaga---tacttatgaaaattgtatattcataggttgttttttcata 30383826  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  30383825 aactaccttaacaaatttataaataacacattaatgcttctttattcgcataa 30383773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 20174874 - 20175007
Alignment:
Q  30 ttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataa 129  Q
    ||||||||||||| |||||||||||||| |  ||    ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20174874 ttatgaaaaagagcttatgcaaataaataagctt----ttatgctaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataa 20174969  T
Q  130 acaaccttaacaaatttataaataatacattaatgctt 167  Q
    || | |||| ||| ||||||||||||||||||||||||    
T  20174970 actaacttagcaagtttataaataatacattaatgctt 20175007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 4974464 - 4974313
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| |||||||||||||| |  ||    |||| |||||||||||||| |||| ||| || ||||||||||||||| |||||||||||||    
T  4974464 cttatgaaaaagagcttatgcaaataaataagctt----ttatgttaattcataagattttaccaacaaatattgtatattcataacttgttttttcata 4974369  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| |||||| ||| |||||||||||||||||| ||||| ||||||||||||||||    
T  4974368 aactaccttagcaagtttataaataatacattagtgcttatttatttgcataagct 4974313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 40240543 - 40240661
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||| ||||  |||   |||| |||||||||| || ||    
T  40240543 ttttatcttaattcataagctctcactaacgaaaattgtatcttcataagttgttttttcataaactacctagacacgcttatgaataatacataaaagc 40240642  T
Q  166 ttctttatttgcataagct 184  Q
    |||||||||||||||||||    
T  40240643 ttctttatttgcataagct 40240661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 48816828 - 48816719
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||       |||||||||| |||||||||||||    
T  48816828 ttaatttataagatcttaccaacgaaaattgtatattcataagttgtttattcttaaactaccttaaca-------aaataatacagtaatgcttcttta 48816736  T
Q  173 tttgcataagctctaaa 189  Q
    |||||||||||||||||    
T  48816735 tttgcataagctctaaa 48816719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 45049340 - 45049468
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||  |||||| ||| ||||||| |||||| |||||||||||| |||||||| ||||||||||| ||||||| |||| ||||||||    
T  45049340 ttttatgttaattcatatcatcttattaatgaaaattttatatttataagttgttttgtcataaactaccttaacaaacttataaacaatatattaatgc 45049439  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || |||||||| |||| || |||||||||    
T  45049440 ttgtttatttgtataaactttaaaataag 45049468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 28741152 - 28741298
Alignment:
Q  38 aagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacctt 137  Q
    ||||| ||||| |||||||| | |||  ||||||||||||||||||| ||| ||||||||||||||||  |||||||  ||||||||||||||| || ||    
T  28741152 aagagcttatgtaaataaataagtttttttttatcttaattcataagttctcactaacgaaaattgtaccttcataatctgttttttcataaactacttt 28741251  T
Q  138 aacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||  |||||| |||||||| || |  | ||||||||||||||||    
T  28741252 aacaagcttataagtaatacataaaggaatatttatttgcataagct 28741298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 19308053 - 19307978
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttata 149  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  19308053 taattcataagattttactaacaaaaattgtatattcataggttgttttttcataaactaccttaacaaacttata 19307978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 30473145 - 30473241
Alignment:
Q  102 tgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgc----ataagctctaaaataag 194  Q
    |||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||| || |||||||||    |||||||||||||||||    
T  30473145 tgtacattcataagttgttttttcataaactaccttaacaaccttataaataatacattaatgtttatttatttgcatatataagctctaaaataag 30473241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 29614346 - 29614196
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||| |||||||| | ||||    ||| |||||| ||||| ||| ||||||||||||||||| |||||||  ||||||||||||    
T  29614346 cttatgaaaaatagcttatgtaaataaataagttta----tattttaatttataagctctcactaacgaaaattgtatcttcataaactgttttttcata 29614251  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| ||||||| ||| ||||||||||||||| ||  ||| ||||||| ||||||||    
T  29614250 aactaccttaa-aaaattataaataatacataaaaacttatttatttacataagct 29614196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 43079907 - 43080029
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| | | ||||||||||||| |||||||| ||||||||||||||| ||||| ||||  |||| ||||| |||| || |||| ||||    
T  43079907 ttaattcataagttctcaatcacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataacacataaaagcttattta 43080006  T
Q  173 tttgcataagctctaaaataaga 195  Q
    ||||||||||||  |||||||||    
T  43080007 tttgcataagctaaaaaataaga 43080029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 53218006 - 53218122
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||  |||| |||||||||| ||  |    
T  53218006 ttttattttaatttataagttctcactaacgaaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaataatacataaaatc 53218105  T
Q  166 ttctttatttgcataag 182  Q
    || |||||| |||||||    
T  53218106 ttatttattcgcataag 53218122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 3645455 - 3645305
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||| |||||||| | ||||    ||| |||||| ||||| ||| ||||||||||||||||| ||||| |  ||||||||||||    
T  3645455 cttatgaaaaatagcttatgtaaataaataagttta----tattttaatttataagctctcactaacgaaaattgtatcttcatgaactgttttttcata 3645360  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| ||||||| ||| ||||||||||||||| ||  ||| ||||||| ||||||||    
T  3645359 aactaccttaa-aaaattataaataatacataaaaacttatttatttacataagct 3645305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 182
Target Start/End: Original strand, 40581041 - 40581159
Alignment:
Q  65 attttatcttaattcataagatcttactaacgaaaattgtatattcataagttg-ttttttcataaacaaccttaacaaatttataaataatacattaat 163  Q
    ||||||| |||||||||||| ||| ||||||||||||||| | |||||| | || ||||||||||||| ||||| ||||  |||| |||||||||| ||     
T  40581041 attttatgttaattcataagttctcactaacgaaaattgtttcttcatacgctgtttttttcataaactaccttgacaagcttattaataatacataaaa 40581140  T
Q  164 gcttctttatttgcataag 182  Q
    |||| ||||||||||||||    
T  40581141 gcttatttatttgcataag 40581159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 22809159 - 22809278
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat-taatg 164  Q
    |||||| |||||||||||| ||||  ||||||||||||||| ||||||||  |||||||||||||| ||||| ||||  |||| ||||||| ||  || |    
T  22809159 ttttatgttaattcataagttcttcttaacgaaaattgtatcttcataagcagttttttcataaactaccttgacaagcttatgaataatatataaaaag 22809258  T
Q  165 cttctttatttgcataagct 184  Q
    ||| ||||||||||||||||    
T  22809259 cttatttatttgcataagct 22809278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 37601034 - 37601121
Alignment:
Q  107 attcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||||||||||||||| |  |||||| | ||||||||  |||||||||||||||||| | || ||||||||||||||||||||||||||    
T  37601034 attcataagttgtttctctataaactatcttaacaagcttataaataatacattaacgtttatttatttgcataagctctaaaataag 37601121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 585133 - 585025
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    ||||||| |||| ||  ||||||||||||||||| |||||||||||||||||||||||| |||| || ||  || | |||||| ||| || |||| ||||    
T  585133 ttaattcttaagttcaaactaacgaaaattgtatcttcataagttgttttttcataaactacctcaagaagcttttgaataatgcataaaagcttattta 585034  T
Q  173 tttgcataa 181  Q
    |||||||||    
T  585033 tttgcataa 585025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 45331261 - 45331389
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||| | |||| ||| |||||||||||| |||||||| |||||||||||||||   ||||||||  ||||  ||||||||| || |     
T  45331261 ttttatgttaattcatatgttcttgctagcgaaaattgtatcttcataagatgttttttcataaactgtcttaacaagcttatgcataatacataaaagg 45331360  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||| ||||||||  ||||||||    
T  45331361 ttatttatttacataagctaaaaaataag 45331389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 32901081 - 32901230
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||||||||||||  || |  |||||| ||||   ||||| ||| ||||||||||||| ||| ||||||||||||||| | |||    
T  32901081 cttatgaaaaatagcttatgcaaataaat--atgt--ttttatattaaaatataagttctcactaacgaaaattttatcttcataagttgttttcttata 32901176  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||| | |||||||||||| | ||||||| || || |||| ||||||| ||||||    
T  32901177 aactatcttaacaaatttgtgaataataaataaaagcttatttatttacataag 32901230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 20894655 - 20894505
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||| ||||| |||||||| |||||||| | ||||    ||| |||||| ||||| ||| ||||||||||||||||| ||||| |  |||||||||| |    
T  20894655 cttataaaaaatagtttatgtaaataaataagttta----tattttaatttataagctctcactaacgaaaattgtatcttcatgaactgttttttcaaa 20894560  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| || |||| ||| ||||||||||||||| ||  ||| ||||||| ||||||||    
T  20894559 aactacattaa-aaaattataaataatacataaaaacttatttatttacataagct 20894505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 4257231 - 4257383
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttg--ttttttca 126  Q
    ||||||||||| || ||||| |||||||| | |||   ||| | |||||| ||||| ||| |||| |||||||||||| |||||||  ||  ||||||||    
T  4257231 cttatgaaaaatagcttatgtaaataaataagttt--gttttttttaatttataagctctcactagcgaaaattgtatcttcataaactgttttttttca 4257328  T
Q  127 taaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||||| ||||||| ||| ||||||||||||||| ||  ||| ||||||||||||||    
T  4257329 taaactaccttaa-aaacttataaataatacataaaaacttatttatttgcataag 4257383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 34707679 - 34707772
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| ||||||| |||| |||  |||||||||||||||| ||| | || ||||||||||||||| ||||||||||  |||| ||||||||||    
T  34707679 ttttatgttaattcgtaagttctcgctaacgaaaattgtatcttcgttagctgttttttcataaactaccttaacaagcttatgaataatacat 34707772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 42956145 - 42956258
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| || ||||| |||||| |||||||| || |  |||| ||||| |||||||||| ||  |    
T  42956145 ttttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttatcataaactacttcgacaagtttatgaataatacataaaaac 42956244  T
Q  166 ttctttatttgcat 179  Q
    || |||||||||||    
T  42956245 ttatttatttgcat 42956258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 184
Target Start/End: Complemental strand, 52021353 - 52021248
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgtttttt-cataaacaaccttaacaaatttataaataatacattaatgcttctttatttgca 178  Q
    ||||| ||| ||||||||||||| ||| |||||||| |||||||| ||||||| ||||| ||||  |||| |||||||||| || || | ||||||||||    
T  52021353 ataagttctcactaacgaaaattatatcttcataagctgtttttttcataaactaccttgacaatcttatgaataatacataaaagcatatttatttgca 52021254  T
Q  179 taagct 184  Q
    ||||||    
T  52021253 taagct 52021248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 1516064 - 1516179
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||| ||||||||||| || ||||  || |||| ||||||  ||||||||||| ||||||||||||||| ||||     
T  1516064 ttttattttaatttataagttctcactaatgaaaattgtatctttataaactgattttccataaaataccttaacaaacttataaataatacataaatg- 1516162  T
Q  166 ttctttatttgcataag 182  Q
    || |||||||| |||||    
T  1516163 ttatttatttgaataag 1516179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 3870192 - 3870320
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| | ||| ||||| |||||  ||||| ||||||||||||||||| ||||| ||||  |||| || || |||| || ||    
T  3870192 ttttatgttaattcataagttctcattaatgaaaagtgtatcatcatatgttgttttttcataaactaccttgacaagcttatgaacaaaacataaaagc 3870291  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||| ||||||||||||| | ||||||    
T  3870292 ttatttttttgcataagctcgataataag 3870320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 37243586 - 37243490
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaa 162  Q
    ||||||||||||||||||| ||| || || ||||| ||||  |||||||  | ||||||||||||| || |||||||  ||||||||||||||||||    
T  37243586 ttttatcttaattcataagttctcaccaatgaaaagtgtaccttcataaactattttttcataaactacgttaacaagcttataaataatacattaa 37243490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 48597832 - 48597922
Alignment:
Q  66 ttttatcttaattcat-aagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataat 155  Q
    |||||| ||||||||| ||| ||| ||| ||||||||||||| ||||||||||||||||||||| || ||||  ||||| |||| ||||||    
T  48597832 ttttatgttaattcattaagttctcactgacgaaaattgtatcttcataagttgttttttcatacactacctcgacaaacttatgaataat 48597922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 184
Target Start/End: Complemental strand, 51409481 - 51409395
Alignment:
Q  98 aaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||| ||| |||||||||||||||||||||||| ||||| ||||| | || ||||||| || || | || ||||||||||||||||    
T  51409481 aaattttatcttcataagttgttttttcataaactaccttgacaaactcatgaataataaataaaagattatttatttgcataagct 51409395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 37778253 - 37778161
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| ||| |||||| |||||||||| |||||||    ||||||||||||| ||||||| |||||| ||||||||||||    
T  37778253 ttttattttaatttataagttctcactaacaaaaattgtatcttcataaccgattttttcataaactaccttaa-aaatttctaaataatacat 37778161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 37456401 - 37456492
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    ||||| |||||| ||||  |||||||||| |||||||||| || |||| || ||||||||||||| | ||||| ||| |||||||||||||||    
T  37456401 tttattttaatttataaattcttactaacaaaaattgtatctttataaattattttttcataaactatcttaa-aaacttataaataatacat 37456492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 52421132 - 52421234
Alignment:
Q  91 ctaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaa 190  Q
    ||||| |||||||||| ||||| |  | ||||||||||||| ||||| ||||  |||| |||||||||| || |||| ||||||||| |||||| |||||    
T  52421132 ctaacaaaaattgtatcttcattaactattttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcgtaagct-taaaa 52421230  T
Q  191 taag 194  Q
    ||||    
T  52421231 taag 52421234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 3876196 - 3876347
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || |||||||||||||| | |    |||||| |||||||||||| |   |||||| |||| | ||  ||| |||||||||||||||||    
T  3876196 cttatgaaaaatagcttatgcaaataaataagt----ttttatattaattcataagttagaactaacaaaaactttaccttcttaagttgttttttcata 3876291  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| |||||||| |  |||| ||||||| || || |||  ||||||| ||||||||    
T  3876292 aactaccttaactagattatgaataataaataaaagctaatttatttacataagct 3876347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 10448852 - 10448778
Alignment:
Q  108 ttcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||||||  ||||||||||||||| || |||||||  ||||||||||||||| || || | ||||||||||||||    
T  10448852 ttcataaactgttttttcataaactacattaacaagcttataaataatacataaaggcatatttatttgcataag 10448778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 33946516 - 33946590
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaac 140  Q
    |||||| |||||||||||| ||| | ||||||||||| ||| | ||||||||| |||||||||||  ||||||||    
T  33946516 ttttatattaattcataagttctcattaacgaaaattttatctacataagttggtttttcataaattaccttaac 33946590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 2086690 - 2086775
Alignment:
Q  99 aattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||||| |||||||  | ||||||||||||| ||||| ||||  ||||||||||||||| || | || ||||||| ||||||||    
T  2086690 aattgtatcttcataaactattttttcataaaccacctttacaagattataaataatacataaaagtttatttatttacataagct 2086775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 182
Target Start/End: Complemental strand, 11528980 - 11528895
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||||| ||| ||||||| || |||| |||||||| || ||||||||||||| |||||||||| || |||| |||| || ||||||    
T  11528980 aaaattatatcttcataattttttttatcataaactacattaacaaatttatgaataatacataaaagcttatttacttacataag 11528895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 17752097 - 17752162
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||||||  || | ||||||||||    
T  17752097 ttttatgttaatttataagttcttactaacgaaaattgtatcttcataaactgatctttcataaac 17752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 19053417 - 19053482
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||||||  || | ||||||||||    
T  19053417 ttttatgttaatttataagttcttactaacgaaaattgtatcttcataaactgatctttcataaac 19053482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 20685897 - 20685840
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    ||||||| ||| ||| ||||| ||||||||||| ||||||||||||||||| ||||||    
T  20685897 taattcacaagttctcactaatgaaaattgtatcttcataagttgttttttgataaac 20685840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 32900736 - 32900813
Alignment:
Q  108 ttcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctc 185  Q
    |||||||||| |||||||| |||| |||||||||| ||||| ||||||| || || |||| | || ||||||||||||    
T  32900736 ttcataagttattttttcacaaactaccttaacaagtttatgaataataaataaaagcttatataattgcataagctc 32900813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 47403710 - 47403820
Alignment:
Q  44 ttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttttt-cataaacaaccttaacaa 142  Q
    |||||||||||||| |||||    |||| |||||| |||||  || || |||||||||||||| ||||||| || |||||| ||||||| || || ||||    
T  47403710 ttatgcaaataaataaattt----ttatgttaatttataagccctcacaaacgaaaattgtatcttcataaattattttttgcataaactacatttacaa 47403805  T
Q  143 atttataaataatac 157  Q
    |||||| ||||||||    
T  47403806 atttatgaataatac 47403820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 51662871 - 51662806
Alignment:
Q  119 ttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||| | ||||||||  |||||||||||||||||||| || | |||||| |||||||    
T  51662871 ttttttcataaactatcttaacaagcttataaataatacattaatgtttatctatttgtataagct 51662806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 23816144 - 23816208
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacctt 137  Q
    |||||||||||| ||| ||| || ||| |||||| |||||||| ||||||||||||||| |||||    
T  23816144 ttaattcataagttctcactgaccaaagttgtatcttcataagctgttttttcataaactacctt 23816208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 29830605 - 29830686
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataa----gttgttttttcataaacaaccttaacaaa 143  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||     || ||||||||||||| |||||||||||    
T  29830605 ttttattttaatttataagttctcactaacgaaaattgtatcttcataaactgttttttttttcataaactaccttaacaaa 29830686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 30917484 - 30917575
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttc-ataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    |||| |||||||| ||| || ||||||||||||||  |||||||||||||| || |||||||||||||||| ||   || |||||||||||||    
T  30917484 actaccgaaaattatatttt-ataagttgttttttttataaacaaccttaataattttataaataatacataaaaatttatttatttgcataa 30917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 52895371 - 52895435
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaa 130  Q
    |||||| |||||||||||  ||| ||||||||||||||||  |||| |||||||||||| |||||    
T  52895371 ttttatgttaattcataaattctcactaacgaaaattgtaacttcagaagttgttttttgataaa 52895435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 24841352 - 24841443
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttca-taaacaaccttaacaaatttataaataata 156  Q
    |||||| |||||| ||||| ||| |  |||||||||||||| ||| ||| || ||||||||  ||| |||||||||||| ||||||||||||    
T  24841352 ttttattttaatttataagctctcaaaaacgaaaattgtatcttcgtaacttattttttcacaaaaaaaccttaacaaacttataaataata 24841443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 33468118 - 33468221
Alignment:
Q  96 gaaaattgtatattcataagttgttttttc-----ataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaa 190  Q
    |||||||||||||||||||  ||||||||      |||||| ||| |||||| |||||||||||||  |||||||||  ||||||||||||  | |||||    
T  33468118 gaaaattgtatattcataaaatgttttttttttatataaactaccataacaagtttataaataatatgttaatgcttacttatttgcataaattttaaaa 33468217  T
Q  191 taag 194  Q
    ||||    
T  33468218 taag 33468221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 43971827 - 43971922
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttattt 175  Q
    ||||| ||| ||||||||||||| ||| ||||||| ||||||| |||||||| |  |||||||| || | ||||||| || || |||| |||||||    
T  43971827 ataagttctcactaacgaaaattttatcttcataaattgttttctcataaactattttaacaaacttgtgaataataaataaaagcttatttattt 43971922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 24842072 - 24842189
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaa-ttgtatattcataagttgttttttcataaacaacctta-acaaatttataaataatacattaat 163  Q
    |||||| |||||| ||||| | ||||||||||||| |||||| |||||||||||||||| ||||||  || ||  ||||| |||| |||||||||| ||     
T  24842072 ttttatgttaatttataagtttttactaacgaaaaattgtatcttcataagttgttttt-cataaattacatttgacaaacttatgaataatacataaaa 24842170  T
Q  164 gcttctttatttgcataag 182  Q
      || ||||||||||||||    
T  24842171 atttatttatttgcataag 24842189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 29270455 - 29270417
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaa 130  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  29270455 taacgaaaattgtatcttcataagctgttttttcataaa 29270417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 42381226 - 42381284
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttttt 124  Q
    |||||| |||||| ||||| ||||||||||||||||| ||| |||||||  ||||||||    
T  42381226 ttttattttaatttataagctcttactaacgaaaattttatcttcataaactgtttttt 42381284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 7300459 - 7300418
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    ||||||||||||||||| || |||||||| ||||||||||||    
T  7300459 actaacgaaaattgtatctttataagttgatttttcataaac 7300418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 53787685 - 53787783
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||| ||||||| |||||||||||||| | |    ||||||||||||||||||| ||| | |||| |||||| ||| || ||||  ||||||||| ||    
T  53787685 cttatggaaaagagcttatgcaaataaataagt----ttttatcttaattcataagttctcaataacaaaaattatatctttataaactgttttttcgta 53787780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 10449097 - 10449061
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaatt 102  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  10449097 ttttatcttaattcataagttctcactaacgaaaatt 10449061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 21721059 - 21720981
Alignment:
Q  30 ttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcat 112  Q
    |||||||||| || ||||||||| ||| ||||||   ||||| |||| ||||||| ||| ||||||||||||||||| |||||    
T  21721059 ttatgaaaaatagcttatgcaaa-aaagtaattt---tttatgttaagtcataagttctcactaacgaaaattgtatcttcat 21720981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 36266297 - 36266249
Alignment:
Q  133 accttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||||||||||| ||||||||||||||| || | || |||||||||||||    
T  36266297 accttaacaaacttataaataatacataaaagtttatttatttgcataa 36266249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 227827 - 227698
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttttt-cataaacaaccttaacaaatttataaataatacattaatg 164  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||| ||||||||||    
T  227827 ttttatgttaattcataagatcttactaacgaaaattgtatattcataagctgtttttttcataaactaccttaacaaacttataaatactacattaatg 227728  T
Q  165 cttctttatttgcataagctctaaaataag 194  Q
    ||| |||||| |||||||||||||||||||    
T  227727 cttatttattcgcataagctctaaaataag 227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 194
Target Start/End: Original strand, 12238453 - 12238577
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgct 166  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||| ||||||||||  ||||||||||||||||||||||    
T  12238453 tttatgttaattcataagatcttactaacgaaaattgtatgttcataagtt---ttttcataaactaccttaacaagcttataaataatacattaatgct 12238549  T
Q  167 tctttatttgcataagctctaaaataag 194  Q
    | ||||||||||||||||||||||||||    
T  12238550 tatttatttgcataagctctaaaataag 12238577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 24439138 - 24439025
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgct 166  Q
    |||||||||||| ||||||||||| |||| |||||||||| || ||||||||||||||||||||| ||| ||||||  |||||||||||||||||||| |    
T  24439138 tttatcttaatttataagatcttattaacaaaaattgtatgtttataagttgttttttcataaactaccgtaacaagattataaataatacattaatgtt 24439039  T
Q  167 tctttatttgcata 180  Q
    | | ||||||||||    
T  24439038 tatatatttgcata 24439025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 16108089 - 16108178
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    ||||| |||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  16108089 tttatgttaattcataagatttaattaacaaaaattgtatattcataagttgttttttcataaactaccttaacaaacttataaataata 16108178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 21788577 - 21788461
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||| | ||||||||  |||| ||||||| || || ||    
T  21788577 ttttatattaattcataagctctcactaacgaaaattttatcttcataagttgttttttcataaactatcttaacaagcttatgaataataaataaaagc 21788478  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  21788477 ttatttatttgcataag 21788461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 27880922 - 27881081
Alignment:
Q  21 tttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtt 120  Q
    ||||| |||||||| ||||| |||||||||||||||| |||||    ||||||||||||||||| | | | ||||||||| | ||  ||||||| |||||    
T  27880922 tttttgaacttatggaaaagggtttatgcaaataaataaattt----ttatcttaattcataagttttcattaacgaaaagtatactttcataaattgtt 27881017  T
Q  121 ttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||| | ||||||| ||| ||||||||||||||| |   | | ||||||||||||||||    
T  27881018 ttttcataagctaccttaataaacttataaataatacataataacatatttatttgcataagct 27881081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 29774858 - 29774749
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||  |||||||||||||| ||||||||||| | || |||||| ||| || | || ||||    
T  29774858 ttaattcataagttctcactaacgaaaattgtattttcataagccgttttttcataaactaccttaacaaactaatgaataatgcataaaagtttattta 29774759  T
Q  173 tttgcataag 182  Q
    ||||||||||    
T  29774758 tttgcataag 29774749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 4027078 - 4026929
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || |||||||||||||| ||  ||   |||| |||||||||||| ||| |||||| |||||||||| |||||||| ||||||||||||    
T  4027078 cttatgaaaaatagcttatgcaaataaat-aagcta---ttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgttttttcata 4026983  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagc 183  Q
    ||| ||||| ||||  ||||  ||||||||| || |||| |||||||||||||||    
T  4026982 aactaccttgacaagcttat-gataatacataaaagcttatttatttgcataagc 4026929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 32522019 - 32522129
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||| ||||| ||||||||||||||||||||| ||||| |  ||||||||||||||| ||||||| ||| ||||||||||||||| ||  ||| ||||    
T  32522019 ttaatttataagctcttactaacgaaaattgtatcttcatgaactgttttttcataaactaccttaa-aaaattataaataatacataaaaacttattta 32522117  T
Q  173 tttgcataagct 184  Q
    ||| ||||||||    
T  32522118 tttacataagct 32522129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 43796993 - 43796922
Alignment:
Q  123 ttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  43796993 ttcataaactaccttaacaaacttataaataatacattaatacttatttatttacataagctctaaaataag 43796922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 32366255 - 32366154
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcat 179  Q
    ||||| |||||||||||||||| ||||||||||||  ||||||||||||||| ||||| | ||| ||||||||||||||| ||  ||| |||||||||||    
T  32366255 ataagctcttactaacgaaaatcgtatattcataaactgttttttcataaactaccttta-aaacttataaataatacataaaaacttatttatttgcat 32366157  T
Q  180 aag 182  Q
    |||    
T  32366156 aag 32366154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 12950081 - 12950138
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttt 123  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12950081 ttttatgttaattcataagatcttactaacgaaaattctatattcataagttgttttt 12950138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 4004931 - 4004811
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttat 173  Q
    ||||||||||| ||| ||||||||||||||||  |||||||||||| ||||||||||| || |||| ||  |||| |||| ||||| || | || |||||    
T  4004931 taattcataagttctcactaacgaaaattgtagcttcataagttgtattttcataaactactttaaaaagcttatgaatagtacataaaagattatttat 4004832  T
Q  174 ttgcataagctctaaaataag 194  Q
    ||||||||| || ||||||||    
T  4004831 ttgcataagttcaaaaataag 4004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 15155966 - 15155817
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| ||||| |||||||| | |    ||||||||||||||||||| ||| | ||||| ||||||||  ||| ||| |||||||||||||    
T  15155966 cttatgaaaaagagcttatgaaaataaataagt----ttttatcttaattcataagttctcattaacggaaattgtaccttcttaaattgttttttcata 15155871  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||  | |||||||  ||||||||||||||| || || | ||||||| ||||||    
T  15155870 aacttcattaacaagattataaataatacataaaagcatatttattttcataag 15155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 38471722 - 38471875
Alignment:
Q  27 aacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttca 126  Q
    |||||||||||||||  |||| ||||||||| ||||     ||||||||||||||||| ||| ||||||||||||||||  |||||||  ||||||||||    
T  38471722 aacttatgaaaaagaacttatacaaataaataaattg----ttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttca 38471817  T
Q  127 taaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||| || | || ||  ||||| |||| |||| || || | ||||||||||||||||    
T  38471818 taaactacatcaagaagcttatacataacacataaaagcatatttatttgcataagct 38471875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 887532 - 887413
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||| |||| ||||||||||| ||||||||  | |||| ||||||| ||||| ||||  |||| |||||||||  || ||    
T  887532 ttttatgttaattcataagttcttgctaatgaaaattgtatcttcataagcaggttttacataaactaccttgacaagcttatgaataatacaaaaaagc 887433  T
Q  166 ttctttatttgcataagctc 185  Q
    || |||||||||||||||||    
T  887432 ttatttatttgcataagctc 887413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 33321279 - 33321390
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgct 166  Q
    ||||| |||||||| ||| ||| |||||| |||||||||| |||||||| ||||||||||||||| ||||| ||||  |||| ||||| |||| || |||    
T  33321279 tttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataagacataaaagct 33321378  T
Q  167 tctttatttgca 178  Q
    | ||||||||||    
T  33321379 tatttatttgca 33321390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 11777104 - 11776986
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||| || ||||| ||| |||||| |||| ||||| |||||||| ||| ||||||||||| | ||||||||  ||||||||||||||| || ||    
T  11777104 ttttatgttagtttataagttctcactaacaaaaagtgtatcttcataagctgtgttttcataaactaacttaacaagcttataaataatacataaaagc 11777005  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||| ||||||||||    
T  11777004 ttatttatatgcataagct 11776986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 42064971 - 42064881
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    |||||| |||||||||||| ||||||||||||||||  ||| |||||||||| |||||| |||||| ||||||||||  |||| |||||||    
T  42064971 ttttatattaattcataagttcttactaacgaaaatgatatcttcataagttatttttttataaactaccttaacaagcttatgaataata 42064881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 34913401 - 34913474
Alignment:
Q  111 ataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||||||||||| | ||||||||| |||| |||||||||| || |||| ||||||||||||||||    
T  34913401 ataagttgttttttcataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataagct 34913474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 25836688 - 25836796
Alignment:
Q  76 attcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttattt 175  Q
    ||||||||| ||| |||||||| |||||| | ||||||||  |||||||||||||| ||||| ||||  |||| |||||||||| || || | |||||||    
T  25836688 attcataagttctcactaacgataattgtgtcttcataagccgttttttcataaactaccttgacaagcttatgaataatacataaaagcatatttattt 25836787  T
Q  176 gcataagct 184  Q
    |||||||||    
T  25836788 gcataagct 25836796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 182
Target Start/End: Complemental strand, 5903634 - 5903537
Alignment:
Q  85 atcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||| |||||| |||||||||| |||||||| ||||||||||| ||| || || ||||  |||| | ||||||| |||||||| ||||||||||||||    
T  5903634 atctcactaacaaaaattgtatcttcataagatgttttttcattaactactttgacaagcttatgagtaatacactaatgcttgtttatttgcataag 5903537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 36501481 - 36501574
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| ||||||||| || ||| ||||||| ||||| ||| |||||||| ||||||||||||||| ||||| ||||  |||| ||||||||||    
T  36501481 ttttatgttaattcatgagttctcactaacgcaaattttatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacat 36501574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 43787800 - 43787884
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    |||||||||| |||||||||||||||||||||| | |||| ||||| ||||| |||||||||| || | || |||||||| ||||    
T  43787800 aaaattgtatcttcataagttgttttttcataagctacctaaacaagtttatgaataatacataaaagtttatttatttgtataa 43787884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 4090602 - 4090491
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| |||   ||||||||||||||| ||| |||| |||||||||||  || ||||| ||||  |||| |||||||||| || | || ||||    
T  4090602 ttaattcataagttctcggtaacgaaaattgtatcttcgtaagctgttttttcattgactaccttgacaagattatgaataatacatcaaagtttattta 4090503  T
Q  173 tttgcataagct 184  Q
    ||||||||||||    
T  4090502 tttgcataagct 4090491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 17546585 - 17546473
Alignment:
Q  21 tttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtt 120  Q
    ||||| ||||| ||||||| | |||||| |||||||| |||||    |||| ||| || ||||| | | ||||||||||||  |||||||||||||||||    
T  17546585 tttttgaacttgtgaaaaataatttatgtaaataaataaattt----ttatgttagtttataagttttcactaacgaaaatgatatattcataagttgtt 17546490  T
Q  121 ttttcataaacaacctt 137  Q
    ||||||||||| |||||    
T  17546489 ttttcataaactacctt 17546473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 736084 - 735990
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacatt 160  Q
    |||||| |||||| ||||| ||| | |||| |||||| ||| |||||||  | ||||||||||||| ||||||||||  ||||||||||||||||    
T  736084 ttttatgttaatttataagttctcaataacaaaaattatatcttcataaactattttttcataaaccaccttaacaagcttataaataatacatt 735990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 7480865 - 7480946
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttat 148  Q
    |||||| |||||||||||| ||| ||||| ||||||||||| ||| ||||||||||||| |||||| ||||| ||||| ||||    
T  7480865 ttttatgttaattcataagttctgactaatgaaaattgtatcttcctaagttgtttttt-ataaactaccttcacaaacttat 7480946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 2401548 - 2401705
Alignment:
Q  22 ttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttt 121  Q
    |||| ||||||||||||| | |||||| |||||||| |||    |||||| |||||  ||||| ||| |||||| |||||||||| |||||||    |||    
T  2401548 ttttaaacttatgaaaaataatttatgtaaataaataaat----ttttattttaatctataagttctgactaacaaaaattgtattttcataacccattt 2401643  T
Q  122 tttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||||||| ||||||| ||| ||||||| ||||||| ||    | ||||||||||||||||    
T  2401644 tttcataaactaccttaa-aaacttataaacaatacataaaaatatatttatttgcataagct 2401705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 22898347 - 22898415
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    ||||||||||||||||| |||||||    ||||||||||||| ||||||| |||||||||||||||||||    
T  22898347 actaacgaaaattgtattttcataacccattttttcataaactaccttaa-aaatttataaataatacat 22898415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 38216139 - 38216046
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||| ||||||| ||| ||||||||||||||||| |||||| | | ||||||| ||||| ||||| ||||  |||| ||||||||||    
T  38216139 ttttatgttaactcataagttctcactaacgaaaattgtatcttcatatgctattttttcctaaactaccttgacaagcttatgaataatacat 38216046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 17797233 - 17797289
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataat 155  Q
    |||||||||| |||||||  ||||||||||||||| ||||||||||| |||||||||||    
T  17797233 aaaattgtattttcataa--tgttttttcataaacgaccttaacaaacttataaataat 17797289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 755714 - 755824
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgtttt-ttcataaacaaccttaacaaatttataaataatacattaatgcttcttt 171  Q
    ||||||||| || ||| |||||| |||||||||| |||||||| |||||| ||||||||| ||| ||||||  || | |||||||||| || ||||  ||    
T  755714 ttaattcattagttctcactaacaaaaattgtatcttcataagctgtttttttcataaactaccgtaacaagcttctgaataatacataaaagcttaatt 755813  T
Q  172 atttgcataag 182  Q
    |||||| ||||    
T  755814 atttgcgtaag 755824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 24007882 - 24007820
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||| ||  |||||||||||    
T  24007882 aaaattgtattctcataagttgttttttcacaaactaccttaacaaactttcaaataatacat 24007820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 30382242 - 30382324
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataat 155  Q
    |||||| ||||| | | ||||||||||||||||| ||| ||| ||||| |||| ||||||||||||| |  ||||||||||||    
T  30382242 ttaatttataagctttcactaacgaaaattgtatcttcctaaattgttctttcgtaaacaaccttaaaagttttataaataat 30382324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 13056300 - 13056408
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| |||   |||||||||||| || |||||||| | |||||| |||||| ||||| ||||  |||| || ||||||| || |||| | ||    
T  13056300 ttaattcataagttctcgttaacgaaaattgcatcttcataagctatttttttataaactaccttgacaagcttatgaaaaatacataaaagcttatcta 13056399  T
Q  173 tttgcataa 181  Q
    |||||||||    
T  13056400 tttgcataa 13056408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 22422135 - 22422254
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| |||||| ||||| | || || | ||  ||||||||||||||| ||||||| ||| |||||||||||| || ||  |    
T  22422135 ttttattttaatttataagctctcactaacaaaaatcgcatcttgaaaaactgttttttcataaactaccttaa-aaacttataaataatatataaaaac 22422233  T
Q  166 ttctttatttgcataagctct 186  Q
    || ||||||||||||| ||||    
T  22422234 ttatttatttgcataaactct 22422254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 43797035 - 43796987
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataa 114  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||||    
T  43797035 ttttatgttaattcataagatcttcttgacgaaaattgtatattcataa 43796987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 10574127 - 10574245
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttt-ttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    |||||| |||||| ||||| |||  || |||||| |||||| ||||||| | ||||| ||||||||| ||||||| ||| |||||||||||| || ||      
T  10574127 ttttattttaatttataagctctcgctgacgaaatttgtatcttcataaatggtttttttcataaactaccttaa-aaacttataaataatagataaaaa 10574225  T
Q  165 cttctttatttgcataagct 184  Q
    ||| | ||||||||||||||    
T  10574226 cttatgtatttgcataagct 10574245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 16108511 - 16108545
Alignment:
Q  148 taaataatacattaatgcttctttatttgcataag 182  Q
    |||||||||||||||||||| ||||||||||||||    
T  16108511 taaataatacattaatgcttatttatttgcataag 16108545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 37409737 - 37409647
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||| |||||||||| ||||||| |||||||||||||||| || || ||||| |    |||||||| | || |||| ||||||||||||||    
T  37409737 taacaaaaattgtattttcataaattgttttttcataaactacattgacaaactagagaataatacttaaaagcttatttatttgcataag 37409647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 4533434 - 4533385
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttt 123  Q
    ||||||||||| | | |||||| |||||||||||||||| ||||||||||    
T  4533434 taattcataagttgtcactaacaaaaattgtatattcatgagttgttttt 4533385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 8441536 - 8441475
Alignment:
Q  123 ttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||| || |||||||| ||||||||||||||| ||  | | ||||||||||||||||    
T  8441536 ttcataaactacattaacaaacttataaataatacataaaaacatatttatttgcataagct 8441475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 12223957 - 12223844
Alignment:
Q  81 taagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcata 180  Q
    |||| ||| ||||| |||||| |||| |||||||  ||||||||||||||| ||||| |||   |||| |||||||||| || | ||  ||||||||| |    
T  12223957 taagttctcactaatgaaaatggtatcttcataaactgttttttcataaactaccttgacaggcttatgaataatacatgaaaggttacttatttgcaaa 12223858  T
Q  181 agctctaaaataag 194  Q
    ||||  ||||||||    
T  12223857 agcttaaaaataag 12223844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 27931530 - 27931481
Alignment:
Q  111 ataagttgttttttcataaacaaccttaacaaatttataaataatacatt 160  Q
    ||||||||||||||||||||   | ||||||| |||||||||||||||||    
T  27931530 ataagttgttttttcataaatttcattaacaagtttataaataatacatt 27931481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 40301414 - 40301354
Alignment:
Q  123 ttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||| ||||||| ||| ||||||||||||||| ||  ||| ||||||||||||||||    
T  40301414 ttcataaactaccttaa-aaacttataaataatacataaaaacttatttatttgcataagct 40301354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 446547 - 446499
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataa 114  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||    
T  446547 ttttattttaatttataagctctcactaacgaaaattgtatcttcataa 446499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 5516189 - 5516077
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttg-ttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttt 171  Q
    |||||| ||||| ||| ||||||||||||||||| || ||||  || ||||||||||||| || || ||||| |||| ||||| ||||  | |||| |||    
T  5516189 ttaatttataagctctcactaacgaaaattgtatttttataaactgtttttttcataaactacatttacaaacttatgaataacacatagaagcttattt 5516090  T
Q  172 atttgcataagct 184  Q
     ||| ||||||||    
T  5516089 ttttacataagct 5516077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 9270124 - 9270187
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    |||| |||||||||| |||| ||  |||||||| |||||| || |||||||||||||||||||||    
T  9270124 taacaaaaattgtattttcagaaactgtttttt-ataaactacattaacaaatttataaataata 9270187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 13097996 - 13097944
Alignment:
Q  108 ttcataagttgttttttcataaacaaccttaacaaatttat-aaataatacat 159  Q
    ||||||||||||||||||||||||||| || ||||  |||| |||||||||||    
T  13097996 ttcataagttgttttttcataaacaactttgacaagcttatgaaataatacat 13097944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 41554602 - 41554662
Alignment:
Q  122 tttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||||||||| || ||||||||||||| |||||||||| || | || |||||||| |||||    
T  41554602 tttcataaactactttaacaaatttatgaataatacataaaagtttatttatttgtataag 41554662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 15414112 - 15413994
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||| |||| |||||||||||||| |    
T  15414112 ttttatgttaattcataagatcttactaacaaaaattgtatattcataagttgttttttagtaaactaccttaacaaacttatcaataatacattaatac 15414013  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  15414012 ttatttatttgcataagct 15413994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 40415938 - 40416054
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||     
T  40415938 ttttatcttaattcataagatcttacaaacaaaaattgtatattcttaagttgttttttcatgaactaccttaacaaacttataaataatacattaatgt 40416037  T
Q  166 ttctttatttgcataag 182  Q
    ||  |||||||||||||    
T  40416038 ttagttatttgcataag 40416054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 39990696 - 39990580
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    ||||||||||||||||||||| |||||||  |||||||||||||| |||| ||||||||||||||  |||||||||||  |||||||||||||||||||     
T  39990696 ttttatcttaattcataagattttactaataaaaattgtatattcttaagatgttttttcataaattaccttaacaaacatataaataatacattaatgt 39990597  T
Q  166 ttctttatttgcataag 182  Q
    || |||||||| |||||    
T  39990596 ttatttatttgtataag 39990580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 29659213 - 29659053
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||| |||||||||||||| | |    ||||||||||||||||||| ||| ||||| ||||||||||  |||||||  ||||||||| ||    
T  29659213 cttatgaaaaagagcttatgcaaataaataagt----ttttatcttaattcataagttctcactaatgaaaattgtactttcataaactgttttttctta 29659118  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataaga 195  Q
    ||| || |||||||  ||||||||||||||| ||  | | |||||||||||||||||||||||||||    
T  29659117 aactacattaacaagcttataaataatacataaa--catatttatttgcataagctctaaaataaga 29659053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 28357472 - 28357344
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||||||||||| |||| ||| |||||||||||||| |  |||||||  ||||||||||||||| || |||||||| |||||||||||||||  | ||    
T  28357472 ttttatcttaattcgtaagttctcactaacgaaaattggaccttcataaactgttttttcataaactacattaacaaacttataaataatacatataggc 28357373  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
     | |||||||||||||||| |||||||||    
T  28357372 atatttatttgcataagctttaaaataag 28357344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 28625600 - 28625472
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||| | ||| ||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||  |||| |||||||| | || ||    
T  28625600 ttttatgttaattcataggttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataatacttaaaagc 28625501  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||||||||||||  ||||||||    
T  28625500 ttatttatttgcataagctaaaaaataag 28625472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 36206059 - 36206153
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagtt-gttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||| |||||  ||||||||||| |||||||||||||||    
T  36206059 ttttatgttagttcataagatcttactaacgaaaattgtatattcataagttattttttttataaattaccttaacaaacttataaataatacat 36206153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 41059722 - 41059873
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| ||||||||||||||||| |  ||    |||| |||||||||||| ||| |||||||||||||| || |||||||| || |||||||||    
T  41059722 cttatgaaaaacagtttatgcaaataaataagctt----ttatgttaattcataagttctcactaacgaaaattgaatcttcataaggtgatttttcata 41059817  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||| | ||  |||| |||||||||| || |||| ||| ||||||||||||    
T  41059818 aacaaccttgataagcttatgaataatacataaaagcttatttgtttgcataagct 41059873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 42852141 - 42852024
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||| | ||| ||||  |||| |||||||||| || ||    
T  42852141 ttttatgttaattcataagttctcactaacgaaaattgtatttt-ataagttgttttttcataaactatcttgacaagcttatgaataatacataaaagc 42852043  T
Q  166 ttctttatttgcataagct 184  Q
    || |||||||| |||||||    
T  42852042 ttatttatttgaataagct 42852024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 29 - 183
Target Start/End: Original strand, 29418685 - 29418835
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| ||||||||||||||||| | |    ||||||||||||| ||||  ||| ||||||||||||||||  ||||||| |||||||||||||    
T  29418685 cttatgaaaaaaagtttatgcaaataaataagt----ttttatcttaatttataaattctcactaacgaaaattgtaccttcataaattgttttttcata 29418780  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagc 183  Q
    ||| || ||| ||   ||||||||||||||| ||  | | |||||||||||||||    
T  29418781 aactacattagcatgcttataaataatacataaagacatatttatttgcataagc 29418835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 13060568 - 13060684
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||||||||| |||  |||||||| ||||||||||||||| ||||| ||||  |||| || ||||||| || ||    
T  13060568 ttttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgttttttcataaactaccttgacaagcttatgaacaatacataaaagc 13060667  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  13060668 ttatttatttgcataag 13060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 43319123 - 43319007
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    ||||||||||||||||||| ||| ||||||||||||| ||  |||||||  ||||||||||||||| || |||||||  ||||||||||||||| ||  |    
T  43319123 ttttatcttaattcataagttctcactaacgaaaattataccttcataaactgttttttcataaactacattaacaagcttataaataatacataaagac 43319024  T
Q  166 ttctttatttgcataag 182  Q
     | ||||||||||||||    
T  43319023 atatttatttgcataag 43319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 1868966 - 1868838
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||| | ||| ||||||||||||||||| ||||||||||| |||||||||||| ||||| ||||  || | |||||||||| || ||    
T  1868966 ttttatgttaattgatacgttctcactaacgaaaattgtatcttcataagttgatttttcataaactaccttgacaagcttgtgaataatacataaaagc 1868867  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || |||||| |||| ||||| | ||||||    
T  1868866 ttatttattagcatgagctcaagaataag 1868838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 17657362 - 17657246
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||||||||| |||| |||||||| ||||||||||||||| ||  |  |||  |||| |||||||||| || ||    
T  17657362 ttttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgttttttcataaactacaatggcaagcttatgaataatacataaaagc 17657263  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  17657262 ttatttatttgcataag 17657246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 29922155 - 29922270
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||  |||||||||||| |||||| ||| ||||||||||| ||||| ||||  |||| |||||||||| ||  |    
T  29922155 ttttatattaattcataagctctcactaaaaaaaattgtatatgcataagctgtgttttcataaactaccttgacaagcttatgaataatacataaaaac 29922254  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  29922255 ttatttatttgcataa 29922270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 5203400 - 5203517
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| |||  ||||| ||| |||||| ||||||| |  |||| |||||||| ||||||| ||||||||||||||||||| ||| |    
T  5203400 ttttattttaatttataagctctctctaacaaaatttgtatcttcataaatgattttctcataaactaccttaa-aaatttataaataatacataaatac 5203498  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  5203499 ttatttatttgcataagct 5203517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 25332233 - 25332322
Alignment:
Q  97 aaaattgtatattcataagttgttttt--tcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||| ||||||||||| || |||||  |||||||  ||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  25332233 aaaattatatattcataatttttttttcttcataaattaccttaacaaacttataaataatatattaatgcttatttatttgcataagct 25332322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 41419621 - 41419531
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||  |||| |||||||    
T  41419621 ttttatgttaattgataagttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaataata 41419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 23087745 - 23087838
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||||||||| ||| |||||| |||||||||  ||||| |||||||||||||||||| |  |||||||  |||||||||||||||    
T  23087745 ttttatattaattcataagttctcactaacaaaaattgtaccttcatgagttgttttttcataaactatattaacaagcttataaataatacat 23087838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 41534716 - 41534615
Alignment:
Q  93 aacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaata 192  Q
    |||||||||||||| |||||||| ||||||||| ||||| ||||| ||||  |||| |||||||||| || |||| ||||||||||||| ||  ||||||    
T  41534716 aacgaaaattgtatcttcataagctgttttttcgtaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataatctgaaaaata 41534617  T
Q  193 ag 194  Q
    ||    
T  41534616 ag 41534615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 6144858 - 6144730
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||  ||||| ||||||||||||||||||| | ||||||||||||  ||||| ||||  |||| | ||||| || || ||    
T  6144858 ttttatattaattcataagttctcgctaacaaaaattgtatattcataagctattttttcataaaataccttgacaagcttatgagtaatatataaaagc 6144759  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||| ||| ||||| ||||||||    
T  6144758 ttatttatttacatgagctcaaaaataag 6144730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 9477489 - 9477380
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||||||||||||||||||||| | |    ||||||||||||||||||| ||| | ||||||||||||||  ||||| |  ||||||||||||    
T  9477489 cttatgaaaaagagtttatgcaaataaataagt----ttttatcttaattcataagttctcagtaacgaaaattgtaccttcatgaactgttttttcata 9477394  T
Q  129 aacaaccttaacaa 142  Q
    | | || |||||||    
T  9477393 acctacattaacaa 9477380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 181
Target Start/End: Complemental strand, 12467377 - 12467269
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgtttttt-cataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    ||||||||||| ||| |||||| |||||||| | |||||||| |||||||| ||||||| ||||| ||||  |||| |||||||||| || |||| ||||    
T  12467377 taattcataagttctcactaacaaaaattgtctcttcataagctgtttttttcataaactaccttgacaagcttatgaataatacataaaagcttattta 12467278  T
Q  173 tttgcataa 181  Q
    |||||||||    
T  12467277 tttgcataa 12467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 38461272 - 38461376
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaa 189  Q
    |||||| |||||| ||| |||||||  ||||||||||||||  || || ||||| ||||||||||||||| || |||| |||||||  ||||||||||||    
T  38461272 actaacaaaaattatatcttcataaactgttttttcataaaatacatttacaaacttataaataatacataaaggcttatttatttttataagctctaaa 38461371  T
Q  190 ataag 194  Q
    |||||    
T  38461372 ataag 38461376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 40152802 - 40152924
Alignment:
Q  22 ttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttt 121  Q
    |||| ||||||||||||| |  |||||||||||||| ||| |   ||||| |||||||||||| ||| |  |||||||||| ||| ||||||| ||||||    
T  40152802 ttttgaacttatgaaaaacatcttatgcaaataaat-aatct---tttatattaattcataagttctcaagaacgaaaattttatcttcataaattgttt 40152897  T
Q  122 tttcataaacaaccttaacaaatttat 148  Q
    |||||||||| | ||||||||||||||    
T  40152898 tttcataaactatcttaacaaatttat 40152924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 16722179 - 16722032
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||| |||||||| |    | ||||||||||||| ||||  ||| ||||||||||| ||||| |||||||   |||| ||| ||    
T  16722179 cttatgaaaaatagcttatgtaaataaatca----acttttatcttaatttataaactctcactaacgaaaagtgtatcttcataaacggtttcttcgta 16722084  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||| ||||||| ||||||||||||||||||| ||  ||| |||||||||||||    
T  16722083 aactaccttaa-aaatttataaataatacataaaaacttatttatttgcataa 16722032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 4728964 - 4728848
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||||||||| ||||||| ||| |||||||  ||||||||||||||| ||||||| ||| || || ||||||||| ||  |    
T  4728964 ttttattttaatttataagctcttactaaggaaaattatat-ttcataaactgttttttcataaactaccttaa-aaacttgtagataatacataaaaac 4728867  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  4728866 ttatttatttgcataagct 4728848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 7364275 - 7364365
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    |||||| |||||||||||| ||| |||||| || ||||||| |||||||||||||| || |||||| ||||||||||  |||| |||||||    
T  7364275 ttttatattaattcataagttctcactaacaaatattgtatcttcataagttgtttgttgataaactaccttaacaagcttatgaataata 7364365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 24030334 - 24030217
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||||||||||||||  ||  ||| ||||||||||||||| || || ||||  |||| |||||||||| || ||    
T  24030334 ttttatgttaattcataagttctcactaacgaaaattgtatcctcgcaag-tgttttttcataaactactttgacaagcttatgaataatacataaaagc 24030236  T
Q  166 ttctttatttgcataagct 184  Q
    || |||||||| |||||||    
T  24030235 ttatttatttggataagct 24030217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 6025951 - 6026044
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    ||||||||||||||||||| | | | |||| |||||||||| || ||||   |||||||||||||| || |||||||| |||||||||||||||    
T  6025951 ttttatcttaattcataagttataattaacaaaaattgtatctttataaaccgttttttcataaactacgttaacaaaattataaataatacat 6026044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 12986988 - 12987096
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttat 173  Q
    ||||||||||| ||| |||||| ||||| |||  |||||||  ||||||||||||||| ||||| ||||  |||| || ||||||| || |||| |||||    
T  12986988 taattcataagttctcactaacaaaaatggtaacttcataaactgttttttcataaactaccttgacaagcttatgaacaatacataaaagcttatttat 12987087  T
Q  174 ttgcataag 182  Q
    |||||||||    
T  12987088 ttgcataag 12987096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 15122636 - 15122549
Alignment:
Q  94 acgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||||||||||||| |||||||  ||||||||||||||| ||||||| ||| ||||||||||||||| ||  ||| ||| ||||||||||    
T  15122636 acgaaaattgtatcttcataaactgttttttcataaactaccttaa-aaacttataaataatacataaaaacttatttctttgcataag 15122549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 40452410 - 40452572
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaa-ttgtatattcataagttgttttttcat 127  Q
    ||||||||||| || |||||||||||||| ||  ||   |||| || ||||||||| ||| ||||||||||| || ||| |||||||| ||||| |||||    
T  40452410 cttatgaaaaatagcttatgcaaataaat-aagcta---ttatgtttattcataagttctcactaacgaaaaattatatcttcataagctgtttcttcat 40452505  T
Q  128 aaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    |||| ||||| ||||  |||| |||||| ||| || |||| ||  ||||||||||||| ||||||||    
T  40452506 aaactaccttgacaagcttatgaataatgcataaaagcttattcctttgcataagctcgaaaataag 40452572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 26003117 - 26003002
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| | ||| ||| ||||||||||||||||| |||||||     |||||||||||  | ||||||||| ||||||||||||||| ||  |    
T  26003117 ttttattttaatttacaagctctcactaacgaaaattgtatcttcataaaccactttttcataaaataacttaacaaacttataaataatacataaaaac 26003018  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  26003017 ttatttatttgcataa 26003002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 42706890 - 42706788
Alignment:
Q  94 acgaaaattgtatattcataagttgttttttc--ataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaat 191  Q
    ||||||||||||| |||||||| ||||||||   |||||| ||||| ||||  |||| |||||||| | || |||| ||||||||||||||||| |||||    
T  42706890 acgaaaattgtatcttcataagctgtttttttttataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataagctcaaaaat 42706791  T
Q  192 aag 194  Q
    |||    
T  42706790 aag 42706788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 1473454 - 1473360
Alignment:
Q  89 tactaacgaaaa-ttgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||||||||||| |||||| |||||||| ||||||||||||||  | ||| ||||  |||| |||||||||| || |||| ||||||||||||||    
T  1473454 tactaacgaaaaattgtatcttcataagctgttttttcataaattaacttgacaagcttatgaataatacataaaagcttatttatttgcataag 1473360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 2577361 - 2577459
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaa-ttgtatattcataagttgttttttcat 127  Q
    ||||||||||| || |||||||||||||| ||||     |||| |||||||||||| ||| ||||||||||| |||||| || | |||||||||||||||    
T  2577361 cttatgaaaaatagcttatgcaaataaataaattg----ttatgttaattcataagttctcactaacgaaaaattgtatttttacaagttgttttttcat 2577456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 10537193 - 10537303
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||||||||||||||  |        |||||||||||||| | ||| ||||  ||||||||||||||| || ||    
T  10537193 ttttatgttaattcataagttctcactaacgaaaattgtatcct--------gttttttcataaactatcttgacaagcttataaataatacataaaagc 10537284  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  10537285 ttatttatttgcataagct 10537303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 13625456 - 13625606
Alignment:
Q  32 atgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttt-tcataaa 130  Q
    |||||||| || |||||||||||||| |    | |||||| |||||| ||||| | | ||||||||||||| ||| || ||||| ||||||| |||||||    
T  13625456 atgaaaaatagcttatgcaaataaataa----acttttatattaatttataagttttcactaacgaaaattttatctttataagctgtttttatcataaa 13625551  T
Q  131 caaccttaacaaatttataaataatacattaatgcttctttatttgcataagctc 185  Q
    | |||| |||||  |||| ||||||| || || || | |||||||||||||||||    
T  13625552 ctacctcaacaagcttatgaataataaataaaagcatatttatttgcataagctc 13625606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 40697126 - 40696993
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttttt-----cataaacaaccttaacaaatttataaataatacatt 160  Q
    |||||| |||||||||||| | | |  ||| |||||||||| |||||||| ||||||||     ||||||  ||||| ||||  |||||||||||||||     
T  40697126 ttttatgttaattcataagttttcaggaacaaaaattgtatcttcataagctgttttttttcttcataaaataccttgacaagcttataaataatacata 40697027  T
Q  161 aatgcttctttatttgcataagctctaaaataag 194  Q
    ||  ||| ||||||||||||||||| ||||||||    
T  40697026 aaaacttatttatttgcataagctcaaaaataag 40696993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 42478946 - 42478889
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttt 123  Q
    |||||| |||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  42478946 ttttatattaattcataagattttacaaataaaaattgtatattcataagttgttttt 42478889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 11191450 - 11191575
Alignment:
Q  22 ttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttt 121  Q
    |||| ||||||||||||||||||| | ||||||| ||||  |   ||| | ||||||||||| || |||||||| ||| || ||||||||||||||||||    
T  11191450 ttttaaacttatgaaaaagagtttgtccaaataa-ttaacct---tttgtattaattcataatattttactaacaaaatttatatattcataagttgttt 11191545  T
Q  122 tttcataaacaaccttaacaaatttataaat 152  Q
    |||  ||||| |||||||| || ||||||||    
T  11191546 ttt-gtaaactaccttaactaacttataaat 11191575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 11991424 - 11991309
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||  ||| ||||||||||||||||| |||||||  | ||||||||||||| |  || ||||  ||||||||||||||| || ||    
T  11991424 ttttatgttaatttataaactctcactaacgaaaattgtatgttcataa-ctattttttcataaaccatatttacaagcttataaataatacataaaagc 11991326  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||| ||||||    
T  11991325 ttatttatttacataag 11991309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 11912075 - 11912182
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| |||||| |||||||||| |||||||| | |||||||| |||| || || ||||  |||| || ||||||| || |||| ||||    
T  11912075 ttaattcataagttctcactaacaaaaattgtatcttcataagctcttttttcacaaactactttgacaagattatgaacaatacataaaagcttattta 11912174  T
Q  173 tttgcata 180  Q
    || |||||    
T  11912175 ttagcata 11912182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 131
Target Start/End: Complemental strand, 35536955 - 35536900
Alignment:
Q  76 attcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    ||||||||| ||| | ||||||||||||||| |||||||| |||||||||||||||    
T  35536955 attcataagttctcagtaacgaaaattgtatcttcataagctgttttttcataaac 35536900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 1576750 - 1576633
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||| |||| ||| |||||| |||||||||| |||| ||||||||||| ||||||| || || ||||  |||| || ||||||| || |     
T  1576750 ttttatgttaattcttaagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttatgaa-aatacataaaagt 1576652  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||| ||||||    
T  1576651 ttatttatttgcttaagct 1576633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 1608065 - 1608182
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||| |||| ||| |||||| |||||||||| |||| ||||||||||| ||||||| || || ||||  |||| || ||||||| || |     
T  1608065 ttttatgttaattcttaagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagcttatgaa-aatacataaaagt 1608163  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||| ||||||    
T  1608164 ttatttatttgcttaagct 1608182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 6125448 - 6125279
Alignment:
Q  20 ctttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgt 119  Q
    |||||| ||||||||||||| || |||||||||||||| |  ||    |||| |||||||||||  ||| |||||| || |||||||||||||||| |      
T  6125448 ctttttgaacttatgaaaaatagcttatgcaaataaataagctt----ttatattaattcataatttctcactaacaaatattgtatattcataagct-a 6125354  T
Q  120 tttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    |||||||||||  || || | ||  |||| |||||||||| || | || ||||||| |||||| || ||||||||    
T  6125353 tttttcataaaatacatttataagattatgaataatacataaaagtttatttatttacataagttcaaaaataag 6125279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 31637087 - 31637184
Alignment:
Q  93 aacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaata 192  Q
    |||||||||||||| |||||||| |||| |||||||||  ||||| ||||  |||| |||||||||| || ||    ||||||||||||||||  |||||    
T  31637087 aacgaaaattgtatcttcataagctgttctttcataaattaccttgacaagcttatgaataatacataaaagc----ttatttgcataagctcataaata 31637182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 7565230 - 7565323
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataag---ttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    |||||||||| |||||||  ||| ||||||||||||||||  ||||||||   || |||||| |||||| || |||||||  ||||||||||||    
T  7565230 ttttatcttagttcataaattctcactaacgaaaattgtaccttcataagtttttttttttttataaactacgttaacaagcttataaataata 7565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 11706915 - 11706998
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcata 180  Q
    |||||||||| |||||||||||||| ||||||||  || || |||| ||||  ||| |||||| || |||| ||||||||||||    
T  11706915 aaaattgtatcttcataagttgtttcttcataaaatacattgacaagtttaggaatgatacataaaagcttatttatttgcata 11706998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 18602691 - 18602632
Alignment:
Q  98 aaattgtatattcataagttgtt-ttttcataaacaaccttaacaaatttataaataata 156  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||  |||| |||||||    
T  18602691 aaattgtatattcataagttgtttttttcataagctaccttaacaagcttatgaataata 18602632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 33757156 - 33757090
Alignment:
Q  117 tgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||||| | ||||| ||| ||||||||||||||| ||  ||| ||||||||||||||||    
T  33757156 tgttttttcataaactagcttaa-aaacttataaataatacataaaaacttatttatttgcataagct 33757090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 2878667 - 2878760
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||| |||||||||| ||| |||  |||| |||||||||| || || ||||| |||| ||||||| || || |||| ||||||||||||||||    
T  2878667 actaacaaaaattgtatcttc-taaactgttgtttcataaaccacattgacaaacttatgaataatagataaaagcttatttatttgcataagct 2878760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 20458524 - 20458641
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||  ||||| ||| || |||||||||||||| |||||||    |||||| |||||| ||||||| ||| ||||||||||||||| ||       
T  20458524 ttttattttaatctataagttctgaccaacgaaaattgtattttcataacacatttttttataaactaccttaa-aaacttataaataatacataaaaat 20458622  T
Q  166 ttctttatttgcataagct 184  Q
     | ||||||||||||||||    
T  20458623 gtatttatttgcataagct 20458641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 28357235 - 28357169
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataataca 158  Q
    ||||||||||||||| |||||||  ||||||||||||||| || || ||||  || |||||||||||    
T  28357235 taacgaaaattgtatcttcataacctgttttttcataaactacattgacaagcttttaaataataca 28357169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 780534 - 780626
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||  ||||| ||| ||||| ||||||||||| || ||||    ||||||||||||| ||||||| ||| |||||||||||||||    
T  780534 ttttattttaatctataagttctgactaatgaaaattgtattttgataacccattttttcataaactaccttaa-aaacttataaataatacat 780626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 6150912 - 6150855
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttt 123  Q
    |||||| ||||||| |||| ||| | |||| ||||||||||||||||||| |||||||    
T  6150912 ttttatgttaattcgtaagttctcagtaacaaaaattgtatattcataagctgttttt 6150855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 7984218 - 7984109
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| ||| | ||||||||||| ||  |||  |||||||||  ||||||| || ||||| |||| |||||||||| ||  |||  |||    
T  7984218 ttaattcataagttctcacttatgaaaattgtatctttgtaaactgttttttctcaaacaactttgacaaacttatgaataatacataaaaacttagtta 7984119  T
Q  173 tttgcataag 182  Q
    ||||||||||    
T  7984118 tttgcataag 7984109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 5559885 - 5559959
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttg---ttttttcataaacaacctt 137  Q
    |||||| | |||||||||  ||| ||||||||||||||||| |||||||| ||   ||||||||||||| |||||    
T  5559885 ttttatgtaaattcataaattctcactaacgaaaattgtatcttcataagctgcttttttttcataaactacctt 5559959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 15364087 - 15364035
Alignment:
Q  111 ataagttgttttttcataaacaaccttaacaaatttataaataatacattaat 163  Q
    ||||||| |||||||| |||  | |||||||| ||||||||||||||||||||    
T  15364087 ataagttattttttcaaaaattatcttaacaagtttataaataatacattaat 15364035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 17128348 - 17128280
Alignment:
Q  116 ttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||| ||||||||||| || || | || ||||| |||||||||| || |||| ||||||||||||||||    
T  17128348 ttgtattttcataaactactttgataagtttatgaataatacataaaagcttatttatttgcataagct 17128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 22201923 - 22202020
Alignment:
Q  91 ctaacgaaaattgtatattcataagttgtttt----ttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||||||||||||| |||| ||| | ||||    ||||||||| ||||| ||||  |||| |||||||||| || |||| ||||||| ||||||||    
T  22201923 ctaacgaaaattgtatcttcacaagcttttttttccttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttacataagct 22202020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 33803772 - 33803820
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataa 114  Q
    |||||| ||| |||||||| | ||||||| |||||||||||||||||||    
T  33803772 ttttatattacttcataagtttttactaatgaaaattgtatattcataa 33803820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 35809210 - 35809094
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| ||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||| || |||||||  |||||||||||||||||||||    
T  35809210 ttttatgttaattcataaaatcttactggcgaaaattgtatattcttaagttgttttttcataaactacgttaacaagcttataaataatacattaatgc 35809111  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  35809110 ttatttatttgcataag 35809094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 29378758 - 29378637
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||| | ||||||||||||| || |||| ||||    
T  29378758 ttaattcataagttcttactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaaactcataaataatacataaaagcttattta 29378659  T
Q  173 tttgcataagctctaaaataag 194  Q
    ||||||||||||| || |||||    
T  29378658 tttgcataagctcaaagataag 29378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 22319271 - 22319372
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcat 179  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |  |||||||| |||| ||||||||||||||| || |||||||||||    
T  22319271 ataatatcttactaacgaaaattgtatattcataagttgttgtttcataaactatgttaacaaacttatgaataatacattaatgtttatttatttgcat 22319370  T
Q  180 aa 181  Q
    ||    
T  22319371 aa 22319372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 47862841 - 47862714
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||||| ||| |||||||||||||||||| |||| || ||||||||||||  ||||||| ||| ||| |||||||||| ||||||    
T  47862841 ttttatgttaattcataagattttattaacgaaaattgtatatttataaattattttttcataaatcaccttaaaaaacttaaaaataataca-taatgc 47862743  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||||| ||| ||||||||||||    
T  47862742 ttatttatttgcgtaaactctaaaataag 47862714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 43818811 - 43818971
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgt-atattcataagttgttttttcat 127  Q
    |||||||||||||| |||||||||||||| | |    ||||||||||||||||||| ||| ||||| ||||||||| |  |||||||  |||||||||||    
T  43818811 cttatgaaaaagagcttatgcaaataaataagt----ttttatcttaattcataagttctcactaatgaaaattgtaaccttcataaactgttttttcat 43818906  T
Q  128 aaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||| ||| |||||||  ||||||||||||||| ||  |   ||||||||||||||||||||||||||    
T  43818907 aaataacattaacaagcttataaataatacataaagac--atttatttgcataagctctaaaataag 43818971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 22032915 - 22032766
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || |||||||||||||| | |    ||||||||||||| ||||| ||| ||||||||||||||||  ||||||| |||||||||||||    
T  22032915 cttatgaaaaaaagcttatgcaaataaataagt----ttttatcttaatttataagttctcactaacgaaaattgtaccttcataaattgttttttcata 22032820  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||| || ||||||   ||||||||||||||| ||  | | ||||||||||||||    
T  22032819 aactacattaacatgcttataaataatacataaaaacatatttatttgcataag 22032766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 22575706 - 22575590
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||||||  ||||||||||||||  | ||||||||| ||||||||||||||| ||  |    
T  22575706 ttttattttaatttataagctcttactaacgaaaattgtatcttcataaactgttttttcataaaatatcttaacaaacttataaataatacataaaaac 22575607  T
Q  166 ttctttatttgcataag 182  Q
     | ||||||||||||||    
T  22575606 gtatttatttgcataag 22575590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 44613439 - 44613557
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| | |||  ||||||||||  ||||||||||||||||||||||| ||||||||||  |||| ||||||| || || ||    
T  44613439 ttttatattaattcataagttctaattaataaaaattgtatcgtcataagttgttttttcataaactaccttaacaagcttatgaataataaataaaagc 44613538  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  44613539 ttatttatttgcataagct 44613557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 47654347 - 47654498
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    |||||||||||||  |||||||||||||| | |    ||||||||||||||||||| ||| ||||||||||||||||  |||||||  ||||||||||||    
T  47654347 cttatgaaaaagatcttatgcaaataaataagt----ttttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttcata 47654442  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| || |||||||  ||||| ||||||||| |  || | ||||||| ||||||||    
T  47654443 aactacattaacaagcttatatataatacatcagggcatatttatttacataagct 47654498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 29390484 - 29390632
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| ||||||||||||||||| |  ||    |||| |||||||||||  |||  |||||||||||||||| ||||||||||| |||||||||    
T  29390484 cttatgaaaaatagtttatgcaaataaataagctt----ttatgttaattcataaattctagctaacgaaaattgtatcttcataagttg-tttttcata 29390578  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||| ||||| ||||  |||| |||||||||| || | || ||||||||||||||    
T  29390579 aactacctttacaagcttatgaataatacatcaaagattatttatttgcataag 29390632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 47511165 - 47511035
Alignment:
Q  66 ttttatcttaattcataagatcttact--aacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaat 163  Q
    |||||| |||||||||||| ||| ||   || ||||||||||| |||||||| |||||||||||| ||  |||||||||  |||| |||||||||| ||     
T  47511165 ttttatgttaattcataagttctcaccccaatgaaaattgtatcttcataagctgttttttcatagacttccttaacaagcttatgaataatacataaaa 47511066  T
Q  164 gcttctttatttgcataagctctaaaataag 194  Q
    |||| ||||||||||||||||| ||||||||    
T  47511065 gcttatttatttgcataagctcaaaaataag 47511035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 16932896 - 16932988
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||| |||||||||||||||    
T  16932896 ttttattttaatttataagcttttactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaacttataaataatacat 16932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 16938279 - 16938371
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||| |||||||||||||||    
T  16938279 ttttattttaatttataagcttttactaacgaaaattgtatcttcataaatggttttttcataaactaccttaa-aaacttataaataatacat 16938371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 28004703 - 28004586
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| |||| || |||||| |||||| ||||||| | |||||||||||||| | ||||| ||| ||||||||||||||| ||  |    
T  28004703 ttttattttaatttataagctcttgctgacgaaatttgtatcttcataaatggttttttcataaacta-cttaaaaaaattataaataatacataaaaac 28004605  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  28004604 ttatttatttgcataagct 28004586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 38372678 - 38372560
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||||||||||||||| | ||| | || || |||||| ||||| ||||| ||||| |||| |||||||||| |  ||    
T  38372678 ttttatgttaattcataagttctcactaacgaaaattgtttcttcttgagctgctttttcgtaaactaccttgacaaacttatgaataatacataagagc 38372579  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  38372578 ttatttatttgcataagct 38372560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 16958935 - 16958843
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| | ||||||||||||||||||| |||||||   |||||||||||||| ||||||| ||| |||||||||||||||    
T  16958935 ttttattttaatttataagcttttactaacgaaaattgtatcttcataaacggttttttcataaactaccttaa-aaacttataaataatacat 16958843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 150
Target Start/End: Original strand, 18251490 - 18251573
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataa 150  Q
    |||||| |||||| ||||||| || |||||||||||||||||||||||| ||| |||||||||||| || ||||||| |||||||    
T  18251490 ttttatgttaatttataagattttgctaacgaaaattgtatattcataaattg-tttttcataaactactttaacaagtttataa 18251573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 30181670 - 30181554
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||  ||||| |||||  |||| |||||||| |||||||| |||||| ||||| ||||  |||| |||||||||| || ||    
T  30181670 ttttatgttaattcataagttcccactaatgaaaacagtatcttcataagctgttttttgataaactaccttgacaagcttatgaataatacataaaagc 30181571  T
Q  166 ttctttatttgcataag 182  Q
    |||||||||||| ||||    
T  30181570 ttctttatttgcctaag 30181554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 41094316 - 41094223
Alignment:
Q  86 tcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||| ||||| ||||  |||| | |||||||| || |||| |||||||||||||    
T  41094316 tcttactaacgaaaattgtatcttcataagt--ttttttcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcataa 41094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 34923053 - 34922935
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttc--ataaacaaccttaacaaatttataaataatacattaat 163  Q
    |||||| ||| |||||||| ||| ||||||||||| ||||| |||| ||| ||||||||   |||||| ||||| ||||| |||| |||||||||| ||     
T  34923053 ttttatgttagttcataagttctcactaacgaaaagtgtatcttcacaagctgtttttttttataaactaccttgacaaacttatgaataatacataaaa 34922954  T
Q  164 gcttctttatttgcataag 182  Q
    |||| ||||||||||||||    
T  34922953 gcttatttatttgcataag 34922935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 14691265 - 14691358
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||||||||| ||| ||||||||||||| ||| ||||||| |||||||||||||||  || || ||||  |||| ||||||||||    
T  14691265 ttttatgttaattcataagttctcactaacgaaaattatatcttcataaattgttttttcataaattacattgacaagcttatgaataatacat 14691358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 991619 - 991504
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||  ||| ||||||||||| ||||| ||||||| | |||||||||||||| ||||||| ||| ||||||||||| ||| ||  |    
T  991619 ttttattttaatttataaactctcactaacgaaaagtgtatcttcataaatggttttttcataaactaccttaa-aaacttataaataatgcataaaaac 991521  T
Q  166 ttctttatttgcataag 182  Q
    || ||||| ||||||||    
T  991520 ttatttatgtgcataag 991504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 14675926 - 14676041
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| | |  |||| ||||||||||| |||||||  ||||||||||||||| ||||||| ||| ||||||||||||||| ||  |    
T  14675926 ttttattttaatttataagctttcgctaatgaaaattgtatcttcataaactgttttttcataaactaccttaa-aaacttataaataatacataaacac 14676024  T
Q  166 ttctttatttgcataag 182  Q
     | ||||||||||||||    
T  14676025 ctatttatttgcataag 14676041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 30094665 - 30094825
Alignment:
Q  32 atgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataa---gttgttttttcata 128  Q
    ||||||||||| |||||||||||||| |  ||    ||||||||||||||||||||| || || ||||| |||   |||||||   ||| ||||||||||    
T  30094665 atgaaaaagagcttatgcaaataaataagctt----ttatcttaattcataagatctcaccaatgaaaagtgt-ccttcataaactgtttttttttcata 30094759  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||| || |||||||  |||||||||||| |||||  |   |||||||| |||||||||||||||||    
T  30094760 aactacattaacaatcttataaataatatattaagacacatttatttgtataagctctaaaataag 30094825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 35246789 - 35246676
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| |||||  || |||||||||||||||||  ||||||   |||||||||||||| ||||||| ||| || |||||||||||| ||  |    
T  35246789 ttttattttaatttataagccctcactaacgaaaattgtatcctcataa--agttttttcataaactaccttaa-aaacttttaaataatacataaaaac 35246693  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  35246692 ttatttatttgcataag 35246676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 19914065 - 19913978
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaata 153  Q
    |||||| |||||  ||||| | ||||||||||||||| | | |||||||   |||||||||||||| || ||||||||||||||||||    
T  19914065 ttttattttaatatataagcttttactaacgaaaattatctcttcataaaccgttttttcataaactacattaacaaatttataaata 19913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 21027510 - 21027597
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||||||| |||| ||  ||||||||||||||| ||||||| ||| ||||||||||||||| ||  ||| ||| ||| ||||||||    
T  21027510 aaaattgtatcttcaaaaactgttttttcataaaccaccttaataaacttataaataatacataaaaacttatttgtttacataagct 21027597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 44799555 - 44799409
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| |||||||| |||||||| | |    |||||| |||||| ||||| ||| ||||||||| ||| ||| |||||||  | |||||||| |    
T  44799555 cttatgaaaaatagtttatgtaaataaataagt----ttttattttaatttataagctctcactaacgaatattctatcttcataaactattttttcaaa 44799460  T
Q  129 aacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||| ||||||| ||| |||||||||||| || ||  ||| |||||||||||||    
T  44799459 aactaccttaa-aaacttataaataata-ataaaaacttatttatttgcataa 44799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 48021614 - 48021728
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| | | ||||| ||||||||||| ||||| ||||  |||||||||||| || |||||||  |||| ||||||| || |  ||    
T  48021614 ttttatattaattcataagttttcactaatgaaaattgtatcttcattagtt-atttttcataaactactttaacaagcttatgaataataaataagagc 48021712  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  48021713 ttatttatttgcataa 48021728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 9024885 - 9024791
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttg-ttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    ||||||||||||||||||| ||| |  |||||||||||||  |||||||  || ||||||||||||| || |||||| |  ||||||||||||||    
T  9024885 ttttatcttaattcataagttctcatcaacgaaaattgtaccttcataaactgtttttttcataaactacattaacacacgtataaataatacat 9024791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 20888664 - 20888578
Alignment:
Q  96 gaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat-taatgcttctttatttgcataa 181  Q
    ||||||||||| ||||||| |||||||||||||||| |||||  |||  |||| ||||||||||  || |||| |||||||||||||    
T  20888664 gaaaattgtatcttcataaattgttttttcataaactacctttgcaagcttatgaataatacataaaaagcttatttatttgcataa 20888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 46744073 - 46744003
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacct 136  Q
    |||||| ||||||| |||| ||| ||||||||||||||||| |||||| | ||||||||||| ||| ||||    
T  46744073 ttttatgttaattcgtaagttctcactaacgaaaattgtatcttcatatgctgttttttcattaactacct 46744003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 23137129 - 23137221
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| ||| ||||| ||||||||||| |||||||    ||||| ||||||| ||||||| ||| |||||||||||||||    
T  23137129 ttttattttaatttataagctctcactaatgaaaattgtatcttcataaacgatttttacataaactaccttaa-aaacttataaataatacat 23137221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 24371430 - 24371490
Alignment:
Q  123 ttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||| ||||||| ||| ||||||||||||||||||  ||| ||||||||||||||||    
T  24371430 ttcataaactaccttaa-aaacttataaataatacattaaaacttatttatttgcataagct 24371490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 39279523 - 39279458
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatac 157  Q
    ||||||||||||||| ||| |||| || |||||||||||| ||||||||||  |||| ||||||||    
T  39279523 taacgaaaattgtatcttcctaagctgatttttcataaaccaccttaacaagcttatgaataatac 39279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 2194008 - 2194126
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagt--tgttttttcataaacaaccttaacaaatttataaataa-tacattaa 162  Q
    |||||| |||||| ||||| ||| ||||||||||||| ||| ||||||| |  | ||||||||||||| ||||||| ||| |||||||||| ||||| ||    
T  2194008 ttttattttaatttataagttctaactaacgaaaattatatcttcataaattattttttttcataaactaccttaa-aaacttataaataagtacataaa 2194106  T
Q  163 tgcttctttatttgcataag 182  Q
      |||  |||||||||||||    
T  2194107 aacttaattatttgcataag 2194126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 23356457 - 23356549
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataataca 158  Q
    |||||| |||||||||| | ||| |||||| ||||| |||| |||||||  ||||||||||||||  ||||| ||||| || | |||||||||    
T  23356457 ttttatgttaattcataggttctcactaacaaaaatagtattttcataaactgttttttcataaattaccttgacaaacttgtgaataataca 23356549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 47648687 - 47648543
Alignment:
Q  32 atgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||||| |||||||||||||||||  ||||    |||| |||||||||||| | | ||||||||||| | ||| || |||  ||||||||||||||||    
T  47648687 atgaaaaatagtttatgcaaataaatatattt----ttatattaattcataagttttcactaacgaaaaat-tatcttaatagattgttttttcataaac 47648593  T
Q  132 aaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
     | |||||||| ||  | ||||||| || || | || |||||||||||||    
T  47648592 tatcttaacaagttcgtgaataataaataaaagtttatttatttgcataa 47648543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 37465852 - 37465943
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttc-ataaacaaccttaacaaatttataaataata 156  Q
    |||||| |||||||||||| |||  | ||| || ||||||| || ||||||||||||||| |||||| | |||||||| ||||| |||||||    
T  37465852 ttttatattaattcataagttctcgccaacaaatattgtatcttaataagttgttttttctataaactatcttaacaagtttatgaataata 37465943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 43391810 - 43391751
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataata 156  Q
    |||||| ||| ||||||| || ||||||||||||| ||||||||||| |||| |||||||    
T  43391810 aaaattatatcttcataaattattttttcataaactaccttaacaaacttatgaataata 43391751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 1312266 - 1312144
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||| || ||||| |||||||| |    | |||||| |||||| ||||  ||| ||||| ||||| |||||||||||||   |||||||||||    
T  1312266 cttatgaaaaatagcttatgtaaataaataa----acttttattttaatttataaactctcactaatgaaaagtgtatattcataaacggttttttcata 1312171  T
Q  129 aacaaccttaacaaatttataaataata 156  Q
    |||  |||||| ||| ||||||||||||    
T  1312170 aactgccttaa-aaacttataaataata 1312144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 6406800 - 6406914
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaatta-atttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcat 127  Q
    ||||||||||| |  |||| ||||||||| | |||| || |||  |||||||||| | ||| | || ||||||||| || |||||||| |||||||||||    
T  6406800 cttatgaaaaataacttatacaaataaataagattttatgttaggttaattcataggttctcattagcgaaaattgcatcttcataagctgttttttcat 6406899  T
Q  128 aaacaaccttaacaa 142  Q
    |||| ||||| ||||    
T  6406900 aaactaccttgacaa 6406914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 16012811 - 16012753
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||||||||| | | ||||||||||||||||| |||| |||  ||||||||||||||    
T  16012811 ttaattcataagttttcactaacgaaaattgtatcttcagaagcagttttttcataaac 16012753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 8180517 - 8180647
Alignment:
Q  22 ttttcaacttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttt 121  Q
    |||||||||||||||||  |  |||||||||||||| |    | |||||| |||||||||||| | | |||||  || ||| ||| || |||||||  ||    
T  8180517 ttttcaacttatgaaaattaacttatgcaaataaataa----acttttatattaattcataagttttcactaataaatattatatttttataagttaatt 8180612  T
Q  122 tttcataaacaaccttaacaaatttataaataata 156  Q
    ||| |||||| ||||||||||  ||||||||||||    
T  8180613 ttttataaactaccttaacaagcttataaataata 8180647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 19308481 - 19308550
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| ||||||| || |||||||| |  |||||||||||| ||| ||||||| |||| ||||||||||    
T  19308481 actaacaaaaattggatcttcataagctaatttttcataaactaccctaacaaacttatgaataatacat 19308550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 47582528 - 47582620
Alignment:
Q  64 aattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaacctt-aacaaatttataaataata 156  Q
    |||||||| |||||| ||||| ||| | |||| |||||||||| ||||||| |||||||  ||||||| | ||| |||||| ||||||||||||    
T  47582528 aattttattttaatttataagttctgattaacaaaaattgtatcttcataaattgttttc-cataaactatctttaacaaacttataaataata 47582620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 48949816 - 48949752
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataat 155  Q
    ||||||||| ||| ||| |||||||  ||||||||||||||| ||||||| ||| |||||||||||    
T  48949816 actaacgaatattatatcttcataaactgttttttcataaactaccttaa-aaacttataaataat 48949752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 14730053 - 14730017
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaa 133  Q
    |||||||||| |||||||| |||||||||||||||||    
T  14730053 aaaattgtatcttcataagctgttttttcataaacaa 14730017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 10619351 - 10619231
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaatt----gtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacatta 161  Q
    |||||| ||||||||||||||||||||||||||| ||    ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  10619351 ttttatgttaattcataagatcttactaacgaaatttatttgtatattcataagttgttttttcataaactaccttaacaaacttacaaataatacatta 10619252  T
Q  162 atgcttctttatttgcataagct 184  Q
    ||||   ||||||||||||||||    
T  10619251 atgc--atttatttgcataagct 10619231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 8011020 - 8011130
Alignment:
Q  76 attcataagatcttactaacgaaaattgtatattcataag--ttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttat 173  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||| |||| ||||| ||||| |||||||||||| |||||||||| |||||    
T  8011020 attcataagatcttactaacgaaaattgtatattcataagtttttttttttcaaaaactaccttgacaaacttataaataatatattaatgcttatttat 8011119  T
Q  174 ttgcataagct 184  Q
    || ||| ||||    
T  8011120 tttcattagct 8011130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 2034207 - 2034319
Alignment:
Q  78 tcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgc 177  Q
    ||||||| | ||||| ||||||||||||| ||  |||||||||||||||||||| ||||| ||||| ||||||||||||||| || |||| |||||||||    
T  2034207 tcataagttattacttacgaaaattgtatcttggtaagttgttttttcataaactaccttgacaaacttataaataatacataaaagcttatttatttgc 2034306  T
Q  178 ataagctctaaaa 190  Q
    |||||||| ||||    
T  2034307 ataagctcaaaaa 2034319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 3829849 - 3830002
Alignment:
Q  31 tatgaaaaagagtttatgcaaataaattaa-tttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataa 129  Q
    ||||||||| || ||||| |||||||| |  ||||||||||| |||||||||||| ||||| |||| |||||| ||| ||||||||||||||||||||||    
T  3829849 tatgaaaaatagcttatgtaaataaataagctttaattttatgttaattcataagttcttattaacaaaaattttatcttcataagttgttttttcataa 3829948  T
Q  130 acaaccttaacaaatttataaataatacattaatgcttctttatttgcataagc 183  Q
    || ||| ||| || ||||| ||||| | || || || | |||||||||||||||    
T  3829949 actaccataaaaactttatgaataacaaataaaagcgtatttatttgcataagc 3830002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 32165227 - 32165354
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||  ||||||||||||||| || |||| ||| ||||||||||||||| ||  |    
T  32165227 ttttattttaatttataagctctcactaacgaaaattgtatcttcataaactgttttttcataaactactttaa-aaaattataaataatacataaaaac 32165325  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||| ||||| ||||||||||||    
T  32165326 ttatttattttcataaactctaaaataag 32165354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 32675855 - 32675971
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||  ||  |||| ||||||| || || ||    
T  32675855 ttttatattaattcataagttctcactaatgaaaattgtatcttcataagttattttttcataaacaaccttacgaagcttatgaataataaataaaagc 32675954  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  32675955 ttatttatttgcataag 32675971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 29623444 - 29623559
Alignment:
Q  67 tttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgct 166  Q
    ||||| |||||||||||| ||| ||||||||||| | ||| |||||||||||||||||||||||| || |||||||| | |||||||||| || || | |    
T  29623444 tttatgttaattcataagttctcactaacgaaaactttattttcataagttgttttttcataaactacattaacaaactcataaataataaataaaaggt 29623543  T
Q  167 tctttatttgcataag 182  Q
    | ||||||||||||||    
T  29623544 tatttatttgcataag 29623559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 10184296 - 10184413
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||||||||||||||||||| | ||||||| |||||||||||||||| ||||||| ||| |||||||||||| || ||  |    
T  10184296 ttttattttaatttataagctcttactaacgaaaattgtttcttcataaattgttttttcataaactaccttaa-aaacttataaataatagataaaaac 10184394  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||| ||||||||    
T  10184395 ttatttatttacataagct 10184413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 32615381 - 32615498
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||| | ||| ||||||||||||||||| ||||||| | |||||||||| ||| ||||||| ||||||||||||||||||| ||  |    
T  32615381 ttttattttaatttatatgctctcactaacgaaaattgtatcttcataaatagttttttcatcaactaccttaa-aaatttataaataatacataaaaac 32615479  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  32615480 ttatttatttgcataagct 32615498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 29052453 - 29052325
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| || ||||| ||||||||  ||||||  ||||||||||||||  ||||||||||| ||||||||||||||| || |     
T  29052453 ttttattttaatttataagctctcacaaacgagaattgtatcatcataaactgttttttcataaaataccttaacaaacttataaataatacataaaagt 29052354  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||| |||| |||||||||||||||||    
T  29052353 ttatttttttgtataagctctaaaataag 29052325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 2027142 - 2027260
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||||||||| ||| |||||| |||||||| |||||||||||||||   ||| ||||| || | |||||| ||| || ||    
T  2027142 ttttatgttaattcataagttcttactaacaaaagttgtatcttcataagctgttttttcataaactgtcttgacaaacttctgaataatgcataaaagc 2027241  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  2027242 ttatttatttgcataagct 2027260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 4808691 - 4808574
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| |||||  |||||||||||| ||||||| |||||||  ||||||||||||||| | ||||| ||| ||||||||||||||| ||  |    
T  4808691 ttttattttaatttataagcccttactaacgaatattgtatcttcataaactgttttttcataaactatcttaa-aaacttataaataatacatgaaaac 4808593  T
Q  166 ttctttatttgcataagct 184  Q
    |  ||||||||||||||||    
T  4808592 tcatttatttgcataagct 4808574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 6632737 - 6632663
Alignment:
Q  108 ttcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||| || || | ||||||||||||||    
T  6632737 ttcataagttgttttttcataaactacattaacaagtttataaataatacataaaagcatatttatttgcataag 6632663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 10755249 - 10755374
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||||||||||||||||||   |||||||| | |||||||||||   ||||| ||||  |||| |||||||| | || ||    
T  10755249 ttttatgttaattcataagttcttactaacgaaaattgt---ttcataagctattttttcataagttaccttgacaagcttatgaataatacgtaaaagc 10755345  T
Q  166 ttctttatttgcataagctctaaaataag 194  Q
    || ||||||||||||||||  ||||||||    
T  10755346 ttatttatttgcataagctaaaaaataag 10755374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 21610015 - 21610133
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||||||||||||||||| |||||||||||  | ||||||||||||| || |||||||  ||||||||||| ||| ||       
T  21610015 ttttattttaatttataagttcttactaacgaaaattatatattcataaactattttttcataaactacattaacaagcttataaataattcataaagaa 21610114  T
Q  166 ttctttatttgcataagct 184  Q
     | ||||||||||||||||    
T  21610115 atatttatttgcataagct 21610133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 21891304 - 21891422
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| |||| | |||||||||| ||| ||||||||||||| |||||||||| || || ||||  |||| ||||||| || ||  |    
T  21891304 ttttatgttaattcataagttcttgcgaacgaaaattctatcttcataagttgttatttcataaactacattgacaagcttatgaataatatatcaaaac 21891403  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  21891404 ttatttatttgcataagct 21891422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 2255854 - 2255738
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||| | ||| |||| | |||||||||| |||||||| ||||||||||||||  ||||||||||  |||| ||| |||||| || ||    
T  2255854 ttttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgttttttcataaattaccttaacaagcttatgaatcatacataaaagc 2255755  T
Q  166 ttctttatttgcataag 182  Q
    |  ||||||||||||||    
T  2255754 tcatttatttgcataag 2255738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 6758747 - 6758631
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| |||||||||| |||||| || |||||||  |||||||||||| ||||||||||  ||||  |||||| |  || ||    
T  6758747 ttttatattaattcataagttctcactaacgaaatttgtatcttgataagttaatttttcataaactaccttaacaagcttatggataataaacaaaagc 6758648  T
Q  166 ttctttatttgcataag 182  Q
    || ||||||||||||||    
T  6758647 ttatttatttgcataag 6758631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 1468294 - 1468178
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| |||||||||||||||| || | |||||||  || |||||||||||| ||||||| |||  |||||||||||||| ||  |    
T  1468294 ttttattttaatttataagctcttactaacgaaaatggtttcttcataaactg-tttttcataaactaccttaa-aaacctataaataatacataaaaac 1468197  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  1468196 ttatttatttgcataagct 1468178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 7267866 - 7267778
Alignment:
Q  95 cgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagc 183  Q
    |||||||||||  |||||||||||||||||||||||| |||||  |||  |||| |||||||||| || |||| ||| |||||||||||    
T  7267866 cgaaaattgtaccttcataagttgttttttcataaactaccttggcaagcttatgaataatacataaaagcttatttgtttgcataagc 7267778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 21025219 - 21025311
Alignment:
Q  92 taacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||| ||||||| |||||| | | ||||||||||||| ||||||||||  ||||  ||||||||| || |||| ||||||||||||||||    
T  21025219 taacgaacattgtatcttcataggctcttttttcataaactaccttaacaagcttatgcataatacataaaagcttatttatttgcataagct 21025311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 10874104 - 10873988
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| | | || ||| |||||||||| |||||||| |||||| |||||||| ||||||||||  |||| ||||||  || || ||    
T  10874104 ttttatgttaattcataagttttcaccaactaaaattgtatcttcataagctgttttctcataaactaccttaacaagcttattaataat--ataaaagc 10874007  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||| ||||||||||    
T  10874006 ttatttatatgcataagct 10873988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 17915065 - 17914948
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||  ||||| ||| ||||||||||||||||| |||||||    ||||||||||||| ||||||| ||| ||||||||||||||| ||       
T  17915065 ttttattttaatctataagttctgactaacgaaaattgtattttcataacccattttttcataaactaccttaa-aaacttataaataatacataaaaat 17914967  T
Q  166 ttctttatttgcataagct 184  Q
     | ||||||||||||||||    
T  17914966 gtatttatttgcataagct 17914948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 194
Target Start/End: Complemental strand, 10054475 - 10054374
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaa 189  Q
    ||||| ||||||||||| |  |||| || ||||||||||||| || || ||||| |||| |||||||||| || |||| ||||||||||||||||| |||    
T  10054475 actaatgaaaattgtatct--ataaattattttttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataagctc-aaa 10054379  T
Q  190 ataag 194  Q
    |||||    
T  10054378 ataag 10054374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 10687419 - 10687309
Alignment:
Q  77 ttcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaat---aatacattaatgcttctttat 173  Q
    |||||||| |||  |||||||||||||||| | |||||||||||||| ||||||| ||||||| |   |||| |||   ||||||| || |||| |||||    
T  10687419 ttcataagttctcgctaacgaaaattgtatctccataagttgtttttacataaactaccttaataggcttatgaataaaaatacatcaaagcttatttat 10687320  T
Q  174 ttgcataagct 184  Q
    |||||||||||    
T  10687319 ttgcataagct 10687309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 10730258 - 10730331
Alignment:
Q  117 tgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||||||||||||||| || ||||||| |||||||||||||||| ||    | ||||||||||||| ||||||||||||    
T  10730258 tgttttttcataaactacattaacaagtttataaataatacataaa----tatttatttgcataaactctaaaataag 10730331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 23239367 - 23239251
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||||||||| ||| ||||| |||| ||||||  |||||| ||| ||||| |||||| || |||||||  |||| ||||||| || || ||    
T  23239367 ttttatattaattcataagttctcactaaggaaagttgtatcgtcataatttgctttttgataaaccacgttaacaagcttatgaataataaataaaagc 23239268  T
Q  166 ttctttatttgcataag 182  Q
    || |||||||| |||||    
T  23239267 ttatttatttgtataag 23239251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 6776904 - 6776809
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctc 185  Q
    ||||| |||| |||||| |||||||||| ||||| ||||||| ||||||||||  ||||  ||| || || || |||| |||||||||||||||||    
T  6776904 actaatgaaatttgtatcttcataagttatttttccataaactaccttaacaagcttatggatattaaataaaagcttatttatttgcataagctc 6776809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 7446859 - 7446934
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||   |||| ||| ||||||||| |||| ||||    
T  7446859 aaaattgtatcttcataagttgttgttttataaacaaccttaacaggcttatgaatgatacattaaagcttattta 7446934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 15054558 - 15054644
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| ||||| | | ||||||||||||||||| ||||||| ||| |||||||||||  || || ||||| |||||| ||||||||    
T  15054558 ttaatttataagttttaactaacgaaaattgtatcttcataaattgctttttcataaaatacttttacaaacttataactaatacat 15054644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 16589864 - 16589778
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||||||||| ||| | ||||||||||  ||| ||||||| ||||||||||||||||  | || ||||| |||| ||||||||||    
T  16589864 ttaattcataagttctcaataacgaaaatcatatcttcataaattgttttttcataaactcctttgacaaacttatgaataatacat 16589778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 16605516 - 16605602
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||||||||| ||| | ||||||||||  ||| ||||||| ||||||||||||||||  | || ||||| |||| ||||||||||    
T  16605516 ttaattcataagttctcaataacgaaaatcatatcttcataaattgttttttcataaactcctttgacaaacttatgaataatacat 16605602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 23314780 - 23314897
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||| ||||||||||| |    |||||| |||||| ||||||| ||| ||||||||||  ||| ||  |    
T  23314780 ttttattttaatttataagctctgactaacgaaaactgtatattcatgaacaattttttgataaacgaccttaa-aaacttataaataacgcataaaaac 23314878  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  23314879 ttatttatttgcataagct 23314897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 23324947 - 23325064
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||| ||||||||||| ||||||||||| |    |||||| |||||| ||||||| ||| ||||||||||  ||| ||  |    
T  23324947 ttttattttaatttataagctctgactaacgaaaactgtatattcatgaacaattttttgataaacgaccttaa-aaacttataaataacgcataaaaac 23325045  T
Q  166 ttctttatttgcataagct 184  Q
    || ||||||||||||||||    
T  23325046 ttatttatttgcataagct 23325064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 34413408 - 34413346
Alignment:
Q  97 aaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||||||| || |||| |||||||||||||||| || || ||||| |||||||||||||||    
T  34413408 aaaattgtatgtttataaattgttttttcataaactacatttacaaacttataaataatacat 34413346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 1240576 - 1240693
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttg-ttttttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    |||||| ||||| |||||  ||| ||||| |||||| |||| ||||||||||| ||||||| ||||  ||||| ||||  |||| |||||||||| || |    
T  1240576 ttttattttaatacataaattctcactaatgaaaatcgtatcttcataagttgtttttttcgtaaattaccttgacaagcttatgaataatacataaaag 1240675  T
Q  165 cttctttatttgcataag 182  Q
    ||| |||||||| |||||    
T  1240676 cttatttatttgaataag 1240693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 9894833 - 9894768
Alignment:
Q  119 ttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||||||||||||  ||||||||||| ||||||||||||||| || | || ||||||||| ||||||    
T  9894833 ttttttcataaaataccttaacaaacttataaataatacataaaagattatttatttgcgtaagct 9894768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 1172438 - 1172386
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaa 142  Q
    ||||| ||||||||||| |||| ||||||||||||||||| ||||||| ||||    
T  1172438 actaatgaaaattgtattttcacaagttgttttttcataagcaaccttgacaa 1172386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 24625937 - 24625857
Alignment:
Q  100 attgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcata 180  Q
    ||||||| |||||||| |  |||||||||||| ||||||||||  |||| |||||||||| || || | ||||||||||||    
T  24625937 attgtatcttcataagctaatttttcataaactaccttaacaagcttatgaataatacataaaagcgtatttatttgcata 24625857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 30534046 - 30533982
Alignment:
Q  120 tttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||||||||| || || ||||| |||| |||||||||| || |||| ||||||||||||||||    
T  30534046 tttttcataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataagct 30533982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 8014884 - 8014790
Alignment:
Q  90 actaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    |||||| |||||||||| |||||| |  |||||||||||||| ||||| ||||  |||| ||||||  || || ||||  |||||||||||||||    
T  8014884 actaaccaaaattgtatcttcatatgcagttttttcataaactaccttgacaagcttatgaataatgaataaaagcttacttatttgcataagct 8014790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 9202365 - 9202430
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaac 131  Q
    |||||| |||||||||||| | | |||||  |||||||||| |||||| | |||||||||||||||    
T  9202365 ttttatgttaattcataagttatcactaataaaaattgtatcttcatatgctgttttttcataaac 9202430  T

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Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 16989727 - 16989820
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| |||||| ||||| || |||||||||||||  ||| |||||||  ||||||||| ||||  || || |||||| ||| ||||||||||    
T  16989727 ttttatgttaatttataagttcgtactaacgaaaatcatatcttcataaactgttttttcttaaaatactttcacaaatatatgaataatacat 16989820  T

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Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 17300752 - 17300820
Alignment:
Q  113 aagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    ||||||| | ||||||||||||||||| ||| | ||||||||||||| ||  ||| ||||||||||||||    
T  17300752 aagttgtatattcataaacaaccttaa-aaaatgataaataatacataaaaacttatttatttgcataag 17300820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 25430732 - 25430847
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttt-ttcataaacaaccttaacaaatttataaataatacattaatg 164  Q
    ||||| ||||||||||||  ||| ||| || |||||||||| |||||||| |||||| ||||||||| ||||| ||||  ||||    ||||||| ||||    
T  25430732 ttttaccttaattcataatttctcactgac-aaaattgtatcttcataagctgtttttttcataaactaccttgacaagcttat---gaatacataaatg 25430827  T
Q  165 cttctttatttgcataagct 184  Q
    ||| |||||||| |||||||    
T  25430828 cttatttatttgtataagct 25430847  T

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Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 34801023 - 34801142
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| |||||  |||||||||| | | || ||||||||||||||||| | ||| || || |||| ||||||| || || | || ||||    
T  34801023 ttaattcataagttctcactaattaaaattgtatctccgtaggttgttttttcataaactatctt-accaacttatgaataataaataaaagtttattta 34801121  T
Q  173 tttgcataagctctaaaataag 194  Q
    ||| ||||||||| ||||||||    
T  34801122 tttacataagctc-aaaataag 34801142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 991257 - 991377
Alignment:
Q  75 aattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttat-aaataatacattaatgcttctttat 173  Q
    |||||||||| ||| | || |||||||||||| ||||| | |||||||| |||||||   ||| ||||| ||||  |||| ||||| || |||| ||||     
T  991257 aattcataagttctcattatcgaaaattgtatcttcatcaattgtttttccataaactgacttgacaaacttatctaatattacataaaagcttatttac 991356  T
Q  174 ttgcataagctctaaaataag 194  Q
    |||||| ||||| ||||||||    
T  991357 ttgcatgagctcaaaaataag 991377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 10401769 - 10401809
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtat 106  Q
    |||||| |||||| ||||| |||||||||||||||||||||    
T  10401769 ttttattttaatttataagctcttactaacgaaaattgtat 10401809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 17300687 - 17300768
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataa 114  Q
    ||||||||||| |||||||| |||||||| | |    |||||| |||||| ||||| | | |||||||||| ||||||||||||||    
T  17300687 cttatgaaaaatagtttatgtaaataaataact----ttttattttaatttataagttgtcactaacgaaagttgtatattcataa 17300768  T

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Target: scaffold1088 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 1396 - 1298
Alignment:
Q  84 gatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| |||||||||||| |||||| ||| || |||||||||||    
T  1396 gatcttactaacgaaaattgtatatttataacttgttttttcataaactaccttaacaaacttataaataatatattaatccttattcatttgcataag 1298  T

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Target: scaffold0012 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 178655 - 178504
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgtttttt-cat 127  Q
    ||||||||||| |||||||| |||||||| | ||||| |||   | |||| ||||| ||||||||||||||||||||| |||||||  | |||||| |||    
T  178655 cttatgaaaaatagtttatgtaaataaataattttaaattt---taaatttataagctcttactaacgaaaattgtatcttcataaactatttttttcat 178559  T
Q  128 aaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataag 182  Q
    |||  ||||||| ||| ||||||||||||||| || |||| ||||||||||||||    
T  178558 aaaataccttaagaaacttataaataatacataaaagcttatttatttgcataag 178504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 194
Target Start/End: Original strand, 14719 - 14840
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||| ||||| ||| |||||||||||||||||||| ||||  || |||||||||||| || || | ||| |||| |||||||||| || |||| ||||    
T  14719 ttaatttataagttctcactaacgaaaattgtatatttataaactgatttttcataaactacatttaaaaacttatgaataatacataaaagcttattta 14818  T
Q  173 tttgcataagctctaaaataag 194  Q
    |||| |||||||| ||||||||    
T  14819 tttgtataagctcaaaaataag 14840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 108980 - 109073
Alignment:
Q  86 tcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataa 181  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||| ||||| ||||  |||| | |||||||| || |||| |||||||||||||    
T  108980 tcttactaacgaaaattgtatcttcataagt--ttttttcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcataa 109073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 2622 - 2673
Alignment:
Q  143 atttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  2622 atttataaataatacattaatacttctttatttgcataaactctaaaataag 2673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 2534 - 2585
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgtttttt 124  Q
    |||||||||||||||||||||||||||||| || | ||||||| ||||||||    
T  2534 ttaattcataagatcttactaacgaaaattatacactcataagctgtttttt 2585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 4184 - 4076
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| ||  ||||||||||||||||| | |||||| | ||||||||||||| | ||| ||||  |||||||||||||||||| ||    
T  4184 ttttatgttaatttataagttcccactaacgaaaattgtat-tacataagctattttttcataaactatctttacaagcttataaataatacattaaagc 4086  T
Q  166 ttctttattt 175  Q
    || |||||||    
T  4085 ttatttattt 4076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 97182 - 97290
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttcttta 172  Q
    |||||||||||| ||| |||||||||||||||||   |||||| ||||||||||||||| ||||| || |  |||| |||| ||||| |  |||| ||||    
T  97182 ttaattcataagttctcactaacgaaaattgtat---cataagctgttttttcataaactaccttgactagcttatgaatactacataatagcttattta 97278  T
Q  173 tttgcataagct 184  Q
    ||||||||||||    
T  97279 tttgcataagct 97290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 24900 - 24747
Alignment:
Q  29 cttatgaaaaagagtttatgcaaataaattaatttaattttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcata 128  Q
    ||||||||||  || |||||||||||||| | |    |||||| |||||| ||||| ||| ||||| ||| ||||||| || || || ||||||||||||    
T  24900 cttatgaaaagtagcttatgcaaataaataagt----ttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcata 24805  T
Q  129 aacaacc--ttaacaaatttataaataatacattaatgcttctttatttgcataagct 184  Q
    ||| |||  || ||||  |||| |||||||||| || |||| ||||||||||||||||    
T  24804 aactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataagct 24747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 1164 - 1062
Alignment:
Q  80 ataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcat 179  Q
    ||||| ||| ||||| |||| |||||| |||||||||| ||||| ||||||  ||||||||||  ||||  |||||| || || |||| |||||||||||    
T  1164 ataagttctcactaatgaaatttgtatcttcataagttatttttccataaattaccttaacaatcttatggataataaataaaagcttatttatttgcat 1065  T
Q  180 aag 182  Q
    |||    
T  1064 aag 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 278965 - 279050
Alignment:
Q  73 ttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacat 159  Q
    |||||| ||||| ||| |||||| ||| |||||| || |||| | |||||||||||||| ||||||| ||| |||||||||||||||    
T  278965 ttaatttataagctctcactaacaaaatttgtatctttataaatggttttttcataaactaccttaa-aaacttataaataatacat 279050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 38419 - 38533
Alignment:
Q  66 ttttatcttaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgc 165  Q
    |||||| |||||| ||||| |||  ||||||||||| | || |||||||  ||||||| ||||||  | ||| | ||||||||||||||||||| ||  |    
T  38419 ttttattttaatttataagctctcgctaacgaaaatcgcatcttcataacctgtttttccataaaatagcttga-aaatttataaataatacataaaaac 38517  T
Q  166 ttctttatttgcataa 181  Q
    || |||||||||||||    
T  38518 ttatttatttgcataa 38533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 142422 - 142332
Alignment:
Q  103 gtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttatttgcataagctctaaaataag 194  Q
    |||| ||||||| |||||||||||||||  || |||| || | ||| |||||||||| || |||  ||||||||||||||||| ||||||||    
T  142422 gtatcttcataatttgttttttcataaattacattaataagtatatgaataatacataaaagctcatttatttgcataagctc-aaaataag 142332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 184
Target Start/End: Original strand, 24363 - 24472
Alignment:
Q  74 taattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacaaccttaacaaatttataaataatacattaatgcttctttat 173  Q
    ||||||| ||| | ||||||||||||||| ||| ||| ||||||||| ||| || ||| ||||| ||||  |||| ||||||||||  | || | |||||    
T  24363 taattcacaagtttttactaacgaaaattatatcttcgtaagttgttattttatcaactaccttgacaagcttatgaataatacatacaagc-tatttat 24461  T
Q  174 ttgcataagct 184  Q
    |||||||||||    
T  24462 ttgcataagct 24472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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