View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18657_high_7 (Length: 487)
Name: NF18657_high_7
Description: NF18657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18657_high_7 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 288; Significance: 1e-161; HSPs: 24)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 30749229 - 30748761
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30749229 |
aacctcggtggaaaactgagtatcaaaggattaaacaatgttggcagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaat |
30749130 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaa |
200 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
30749129 |
tatgcttgtcatgggtatacaaggaggaatctacggttagtgctgagcaagtacttgaagtgcttcaacctcactcaaatctcaaatgcttgacaataaa |
30749030 |
T |
|
| Q |
201 |
ttgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccatta |
300 |
Q |
| |
|
|| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||| ||| |
|
|
| T |
30749029 |
ttactatgaaggattatcgttaccaagttggataattattcttagtaatttaatttctcttgaacttgagatttgcaacaaaattgtgcggcttccgtta |
30748930 |
T |
|
| Q |
301 |
cttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
400 |
Q |
| |
|
|||||||||||||||||||| || ||||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
30748929 |
cttggtaaactaccatctctaaaaaaactaagattatatggtatgaataatctgaaatacttggatgatgatgaatctgagtatggtatggaggtgagcg |
30748830 |
T |
|
| Q |
401 |
ttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
||||||||||||| |||||||| | ||| || |||||||||||||||||| |||||||||||||||| |
|
|
| T |
30748829 |
ttttcccatctctagaggaactcaacttaaaatccctaccaaacatagagggattattgaaagtggaaa |
30748761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 30677685 - 30678153
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| |
|
|
| T |
30677685 |
aacctcagtggaaaactgagtatcaaaggattaaacaatgttgctagtttatctgaagctgaagcggctaaattgatggataaaaaagaccttcatgaat |
30677784 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaa |
200 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||| |||||| ||||| |
|
|
| T |
30677785 |
tatgcttgtcatggggatacaaggaggaatctacggttagtgctgagcaagtacttgaagtgcttaaacctcactcaaatctcaaatgcttgacaataaa |
30677884 |
T |
|
| Q |
201 |
ttgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccatta |
300 |
Q |
| |
|
|| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||| ||| |
|
|
| T |
30677885 |
ttactatgaaagattatcgttaccaagttggataattattcttagtaatttaatttctcttgaacttgaggaatgcaacaaaattgtgcggcttccgtta |
30677984 |
T |
|
| Q |
301 |
cttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
400 |
Q |
| |
|
| |||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
30677985 |
cgtggtaaactaccatctctaaaaagactgagattatctcgtatgaataatctgaaatacttggatgatgatgaatctgaggatggtatgaaggtgaggg |
30678084 |
T |
|
| Q |
401 |
ttttcccatctctggaggaacttatattacgatac-ctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
||||||||||||||||| |||| ||||| ||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
30678085 |
ttttcccatctctggagaaactcttatta-gattctctaccaaacatagaggggttattgaaagtggaaa |
30678153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 4 - 469
Target Start/End: Complemental strand, 29871769 - 29871304
Alignment:
| Q |
4 |
ctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattat |
103 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29871769 |
ctcggtggaaaactgagtatcgaaggattaaacaatgttggcagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattat |
29871670 |
T |
|
| Q |
104 |
gcttgtcatggagatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaattg |
203 |
Q |
| |
|
|||||||||||| || | ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
29871669 |
gcttgtcatggatatcgcaacaggaatctataattagtgctgagcaagtactcgaagagcttcaacctcactcaaatctcaaatgcttgacaataaatta |
29871570 |
T |
|
| Q |
204 |
ctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccattactt |
303 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | | || ||||| |||||||||||||| |||||| |
|
|
| T |
29871569 |
ctatgaaggattatcgttaccaagttggataattattcttagtaatttaatttctcttaaacttgaggattgcaacaagattgtgcggcttccgttactt |
29871470 |
T |
|
| Q |
304 |
ggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttt |
403 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
29871469 |
ggtaaactaccatctctaaaaaaactggaattatcttatatggataatctgaaatacttggatgatgatgaatctcaggatggtatggaggtgaggattt |
29871370 |
T |
|
| Q |
404 |
tcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
||||||||||||||||||| ||||| | |||||||||||||||| ||||||||||| |||| |
|
|
| T |
29871369 |
tcccatctctggaggaactcgtattatataagttaccaaacatagagggtttattgaaagttgaaa |
29871304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 30435408 - 30434940
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
30435408 |
aacctcggtggaaaactgagtatcaaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgaagggtaaaaaagaccttcatgaat |
30435309 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaa |
200 |
Q |
| |
|
|||||||||| |||| || | ||||||||| | || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30435308 |
tatgcttgtcgtggatatcgcaacaggaatctataattagatctgagcaattactcgaagagcttcaacctcactcaaatctcaagtgcttggatataaa |
30435209 |
T |
|
| Q |
201 |
ttgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccatta |
300 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | | || |||||||||||||||||||| ||| |
|
|
| T |
30435208 |
ttgctatgacggattatcgttaccaagttggataattattcttagtaatttaatttctcttaaacttggggattgcaacaaaattgtgcggcttccgtta |
30435109 |
T |
|
| Q |
301 |
cttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
400 |
Q |
| |
|
||||||||||||||||||| || ||| ||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30435108 |
tttggtaaactaccatctctaaaaaaacttagagtatatggtatgaataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
30435009 |
T |
|
| Q |
401 |
ttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30435008 |
ctttcccatctttggaggtactcgaattacatgggttaccaaacatagaggggttattgaaagtggaaa |
30434940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 30482990 - 30482522
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30482990 |
aacctcggtggaaaactgcatatccaaggattaaacaatgttggcaggttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaat |
30482891 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaa |
200 |
Q |
| |
|
||||||||||||||| || | | ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
30482890 |
tatgcttgtcatggatatcccaacaggaatctataattagtgctgagcaagtacttgaagagcttcaacctcactcaaatctcaaatgcttgacaataaa |
30482791 |
T |
|
| Q |
201 |
ttgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccatta |
300 |
Q |
| |
|
|| | |||| || ||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||| |
|
|
| T |
30482790 |
ttacaatgaagggttatcgttaccaagttggataagccttcttagtaatttaatttctcttgaacttcggaattgcaacaaaattgtgcggcttccgtta |
30482691 |
T |
|
| Q |
301 |
cttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
400 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || |
|
|
| T |
30482690 |
cttggtaaactaccatctctaaaaaaactggaattatcttatatggataatctgaaatacttggatgatgatgaatctcaggatggtgtggaggtgatgg |
30482591 |
T |
|
| Q |
401 |
ttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||| ||||||| ||| || ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30482590 |
ttttccgatctctgatggatctccatttacgatacctacgaaacatagaggggttattgaaagtggaaa |
30482522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 30242889 - 30243357
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30242889 |
aacctcggtggaaaactgagtatccaacacttaaacaatgttggcagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaat |
30242988 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaa |
200 |
Q |
| |
|
||||||||||||||| || | | | ||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
30242989 |
tatgcttgtcatggatatcccaacatgaatctataattagtgctgagcaagtacttgaagtgcttcaacctcactcaaatctcaagtgcttgaaaataag |
30243088 |
T |
|
| Q |
201 |
ttgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccatta |
300 |
Q |
| |
|
|| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||| |
|
|
| T |
30243089 |
tttctatgagggattatccttaccaagttggataattcttcttagtaatttaatttctcttgaacttcggaattgcaacaaaattgtgcggcttccgtta |
30243188 |
T |
|
| Q |
301 |
cttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
400 |
Q |
| |
|
|||||||||||||||| ||| ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30243189 |
cttggtaaactaccatatctaaaaaaactggaattattcgaaatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
30243288 |
T |
|
| Q |
401 |
ttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
||||||||||||| |||| ||| |||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
30243289 |
ttttcccatctctagaggtactccaattatcttgtctaccaaacatagaggggttattgaaagtggaaa |
30243357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 30339042 - 30339510
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30339042 |
aacctcggtggaaaactgcatatccaaggattaaacaatgttggcaggttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
30339141 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaagaaggaatctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaa |
200 |
Q |
| |
|
|||||||||| |||| || | ||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||| | |||| |||| |
|
|
| T |
30339142 |
tatgcttgtcgtggatatcgcaacaggaatctataattagtgctgagcaagtgctcgaagagcttcaacctcactcaaatctcaattccttgacagtaaa |
30339241 |
T |
|
| Q |
201 |
ttgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccatta |
300 |
Q |
| |
|
|| |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| | |||| ||| || ||||||||||||| ||||| ||| |
|
|
| T |
30339242 |
tttctatgaaggattatcgttaccaagttggataagccttcttagtaatttaatttctcttaatctttggaattgcaacaaaattgtgctgcttcagtta |
30339341 |
T |
|
| Q |
301 |
cttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
400 |
Q |
| |
|
|||||||||||||||||||| || ||| ||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30339342 |
cttggtaaactaccatctctaaaaaatcttagagtatatcgtatgaataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgaggg |
30339441 |
T |
|
| Q |
401 |
ttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
30339442 |
ttttcccatctctggaggtactctacttacaacgcctaccaaacatagaggggttattgaaagtggaaa |
30339510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 30713939 - 30714419
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30713939 |
aacctcggtggaaaactgagtatcaaaggattaaacaatgttggcagtttatttgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaat |
30714038 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaag-aaggaat-----------ctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtg |
188 |
Q |
| |
|
||| ||||||||||| | |||| ||||||| || || |||||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
30714039 |
tatacttgtcatggaaagacaaacaaggaattccaaagacccctgttgttagtgctgagcaagtactcgaagagcttcaacctcactcaaatctcaaatg |
30714138 |
T |
|
| Q |
189 |
cttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtg |
288 |
Q |
| |
|
|||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | | || || ||||||||| |
|
|
| T |
30714139 |
cttgacaataaattactatgaaggattatcattaccaagttggataattattcttagtaatttagtttctcttgtacttctccattgcaagaaaattgtg |
30714238 |
T |
|
| Q |
289 |
cggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggta |
388 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30714239 |
cggcttccgttacttggtaaactaccatctctaaaaaaactgagattatatggtatcaataatctgaaatacttggatgatgatgaatctgaggatggta |
30714338 |
T |
|
| Q |
389 |
tggaggtgagggttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||| |||| | |||| |||||||| |||||||||||||||||||| |
|
|
| T |
30714339 |
tggaggtgagggttttcccctctctggagatactcgaattatcttgtctacgaaacatagtggggttattgaaagtggaaa |
30714419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 30059955 - 30059475
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30059955 |
aacctcggtggaaaactgcatatccaaggattaaacaatgttggcaggttatttgaagctgaagcggctaatttgatgggtaaaaaagaccttcatgaat |
30059856 |
T |
|
| Q |
101 |
tatgcttgtcatggagatac-aagaaggaat-----------ctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtg |
188 |
Q |
| |
|
||| ||||||||||| | || || ||||||| || || |||| |||||||||||| ||| ||||||||||||||||||||||| || |
|
|
| T |
30059855 |
tatacttgtcatggaaagacaaacaaggaattccaaagaaccctgttgttagtgttgagcaagtacttgaagttcttcaacctcactcaaatctcaactg |
30059756 |
T |
|
| Q |
189 |
cttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtg |
288 |
Q |
| |
|
|||| | |||| || |||||| |||||||| || |||||||||||||||||||||||||||||| |||||||| ||||| | ||||| ||| ||||| |
|
|
| T |
30059755 |
cttgaaaataagtttctatgagggattatccttgccaagttggataattattcttagtaatttagtttctcttaaacttaagcgttgtaagaaagttgtg |
30059656 |
T |
|
| Q |
289 |
cggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggta |
388 |
Q |
| |
|
||||||| |||||||||| |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30059655 |
cggcttcagttacttggtatactaccatctttaaaaaacctggaattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggta |
30059556 |
T |
|
| Q |
389 |
tggaggtgagggttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
30059555 |
tggaggtgagggttttcccatctctggaggaactcgtattatatcagttaccaaacatagagggtttattgaaagtggaaa |
30059475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 139 - 469
Target Start/End: Complemental strand, 30399513 - 30399183
Alignment:
| Q |
139 |
agtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataatta |
238 |
Q |
| |
|
|||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
30399513 |
agtgctcagcaagtactcgaagtgcttcaacctcactcaaatctcaagtgcttgaaaataaattactatgacggattatcattaccaagttggataatta |
30399414 |
T |
|
| Q |
239 |
ttcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatc |
338 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||| || || ||| ||||||| |||| ||| ||||||||||||| ||||| ||| |||||| |
|
|
| T |
30399413 |
ttcttagtaatttagtttctcttgaacttgggaattgcaagaaagttgtgcgacttcagttaattggtaaactaccgtctctaaaaaaactggaattatc |
30399314 |
T |
|
| Q |
339 |
ttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggaggaacttatattacgataccta |
438 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| || |||| |
|
|
| T |
30399313 |
tgatatggataatctgaaatacttggatgatgatgaatctcaggatggtgtggaggtgagggttttcccatctctggaggaactccatttactatgccta |
30399214 |
T |
|
| Q |
439 |
ccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
30399213 |
ccaaacatagaggggttattgaaagtggaaa |
30399183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 144 - 469
Target Start/End: Complemental strand, 29852742 - 29852417
Alignment:
| Q |
144 |
tgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattatcattaccaagttggataattattctt |
243 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||||||||||||| ||||| |
|
|
| T |
29852742 |
tgagcaagtactcgaagagcttcaacctcactcaaatctcaagtgcttggacataaattactatgaaggattatcgttaccaagttggataagccttctt |
29852643 |
T |
|
| Q |
244 |
agtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttata |
343 |
Q |
| |
|
|||| ||||||||||||| ||||| ||| || |||||||||||||||||||| |||||| |||||||||||| ||| || ||||| | | |
|
|
| T |
29852642 |
agtagtttaatttctcttgaacttcggaattgcaacaaaattgtgcggcttccgttactttgtaaactaccatatctaaaaaagttggtattattcaaaa |
29852543 |
T |
|
| Q |
344 |
tggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggaggaacttatattacgatacctaccaaa |
443 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||| ||| |
|
|
| T |
29852542 |
tggataatctgaaatacttagatgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggagatacttctattacaacgcctacgaaa |
29852443 |
T |
|
| Q |
444 |
catagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
29852442 |
catagaggggttattgaaagtggaaa |
29852417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 242 - 469
Target Start/End: Complemental strand, 4381003 - 4380776
Alignment:
| Q |
242 |
ttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatctta |
341 |
Q |
| |
|
|||||||||||||||||||| |||||| || |||||| ||||||||||||| | ||||||||||||| ||||||| || ||||| | |
|
|
| T |
4381003 |
ttagtaatttaatttctcttaaactttgtgtttgcaacaaagttgtgcggcttccgtcacttggtaaactaacatctctaaaaaaattggaattatttcg |
4380904 |
T |
|
| Q |
342 |
tatggataatctgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggaggaacttatattacgatacctacca |
441 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||| |
|
|
| T |
4380903 |
tacggataatctgaaatacttggatgatgatgaatttgaggatggtatggaggtgagggttttcccatctctggaggtactcgaattatattgtctacca |
4380804 |
T |
|
| Q |
442 |
aacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
4380803 |
aacataaaggggttattgaaagtggaaa |
4380776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30399663 - 30399550
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| || |||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
30399663 |
aacctcggtggaaaactgcgtatcgaaggcttaaaagattttggcagtttatctcaagctcaagcggctgatttgatgggtaaaaaagaccttcatgaat |
30399564 |
T |
|
| Q |
101 |
tatgcttgtcatgg |
114 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
30399563 |
tatgcttgtcatgg |
30399550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 374
Target Start/End: Original strand, 17418674 - 17419059
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
||||||||||||||| || ||||| |||| ||||| ||||||||| ||||||||||||| ||| ||||| ||||| |||||||||||||| || ||| |
|
|
| T |
17418674 |
aacctcggtggaaaattgagtatcaaaggcttaaaagatgttggtaatttatctgaagctcaagaagctaagttgataggtaaaaaagacctccaagaat |
17418773 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaagaaggaat------------ctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtg |
188 |
Q |
| |
|
|||||||||| |||| | ||| | |||| ||| || |||||||||||| |||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
17418774 |
tatgcttgtcgtggaaaagcaacgatgaattgacaaagacccctattgttagtgctgagcaactacttgaagtgcttcaacctcactcaaatctcaagtg |
17418873 |
T |
|
| Q |
189 |
cttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtg |
288 |
Q |
| |
|
|||| | |||| || |||||| ||| ||| |||||||||||||||| |||||||||||||||| || | || |||| || ||| | || |||| |
|
|
| T |
17418874 |
cttgaaaataacttactatgatggaatattgttaccaagttggataagtattcttagtaatttagttaatgttgcacttagtaattgtgagaactgtgtg |
17418973 |
T |
|
| Q |
289 |
cggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatga |
374 |
Q |
| |
|
|||||| | | | |||||||||||| |||||| ||| ||||||||| ||| | |||||||||||||||||||||||||| |
|
|
| T |
17418974 |
cggctttcgtcatttggtaaactacaatctctaaaattactggaattatcttacatgaaaaatctgaaatacttggatgatgatga |
17419059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29852897 - 29852784
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
||||| |||||||| ||| ||||| |||| ||||| |||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| |
|
|
| T |
29852897 |
aaccttggtggaaagctgagtatcaaaggcttaaaagatgtgggcagtttatctgaagctgaagcggctaatttgatgggtaaaacagacattcatgaat |
29852798 |
T |
|
| Q |
101 |
tatgcttgtcatgg |
114 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
29852797 |
tatgtttgtcatgg |
29852784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 469
Target Start/End: Complemental strand, 30205938 - 30205628
Alignment:
| Q |
162 |
gcttcaacctcactcaaatctcaagtgcttggatataaattg---ctatgacggattatcattaccaagttggataattattcttagtaatttaatttct |
258 |
Q |
| |
|
||||||||||||||||||||||||| | ||| |||| ||| |||| || |||||| |||||||||||||||| |||||| ||||||||| || || |
|
|
| T |
30205938 |
gcttcaacctcactcaaatctcaagaggttg---ataatttgtcactataacagattattcttaccaagttggataagtattctcagtaatttagttgct |
30205842 |
T |
|
| Q |
259 |
cttcaacttttgaaatgtaacaaaattgtgcggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaat |
358 |
Q |
| |
|
||| ||||| ||| ||| | ||| |||||||||||| | | |||||||||||| |||| | || || | ||||| || || |||||| |
|
|
| T |
30205841 |
cttgtactttggaattgtgagaaatgtgtgcggcttccgtcatttggtaaactacaatctttgaaaaaactcgctttgcataatatgaatgatttgaaat |
30205742 |
T |
|
| Q |
359 |
acttggatgatgatgaa---tctgaggatggtatggaggtgagggttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggtt |
455 |
Q |
| |
|
||||||||||||||||| ||| | |||||||| | || |||| |||||||||||||||||| ||| |||||| | |||||||||| |||| ||||| |
|
|
| T |
30205741 |
acttggatgatgatgaagaatctcaagatggtattgtggcgaggattttcccatctctggaggtactcatattagaaatcctaccaaacttagaagggtt |
30205642 |
T |
|
| Q |
456 |
attgaaagtggaaa |
469 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
30205641 |
attgaaagtggaaa |
30205628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30206111 - 30206020
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagacct |
92 |
Q |
| |
|
||||| || |||||||| ||||| |||| ||||| ||||| ||||||||||||||||| |||| || ||||||||||||||||||||||| |
|
|
| T |
30206111 |
aacctgggaggaaaactaagtatcaaaggtttaaatgatgtttgtagtttatctgaagctcaagcagccaatttgatgggtaaaaaagacct |
30206020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 30474818 - 30474742
Alignment:
| Q |
141 |
tgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggattat |
217 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||| | ||| | ||| || |||||||||||||| |
|
|
| T |
30474818 |
tgctgagcaagtacttgaaatgcttcaacctcactcaaatctcaagaggttgaaaatactttactatgacggattat |
30474742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 17982470 - 17982400
Alignment:
| Q |
44 |
gtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatgg |
114 |
Q |
| |
|
||||||||||||||| ||||| || ||||| || |||||||||||||| || |||||||| |||||||| |
|
|
| T |
17982470 |
gtagtttatctgaagttgaagaagcaaattttataggtaaaaaagacctcaatgaattatgcctgtcatgg |
17982400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 468
Target Start/End: Original strand, 17419060 - 17419133
Alignment:
| Q |
395 |
tgagggttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaa |
468 |
Q |
| |
|
||||| |||| |||||||| ||| || ||||||||| | ||||||||| |||||||||| |||||||||||| |
|
|
| T |
17419060 |
tgaggatttttccatctctagagtttctcatattacgacaactaccaaacttagaggggttgttgaaagtggaa |
17419133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 30522309 - 30522362
Alignment:
| Q |
162 |
gcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggatt |
215 |
Q |
| |
|
||||||||||||||||||||||||| |||| | ||| || ||||||||||||| |
|
|
| T |
30522309 |
gcttcaacctcactcaaatctcaagatcttgaaaatacatggctatgacggatt |
30522362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 30562649 - 30562702
Alignment:
| Q |
162 |
gcttcaacctcactcaaatctcaagtgcttggatataaattgctatgacggatt |
215 |
Q |
| |
|
||||||||||||||||||||||||| |||| | ||| || ||||||||||||| |
|
|
| T |
30562649 |
gcttcaacctcactcaaatctcaagatcttgaaaatacatggctatgacggatt |
30562702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 417
Target Start/End: Complemental strand, 17982152 - 17982088
Alignment:
| Q |
353 |
tgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggag |
417 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||| ||||| ||| |||||||||||||||| |
|
|
| T |
17982152 |
tgaaatacttggatgatgatgaatttgaaaatggtgtggagatgataaatttcccatctctggag |
17982088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 30203372 - 30203320
Alignment:
| Q |
366 |
tgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggagg |
418 |
Q |
| |
|
||||||||||||| | ||||||||||||||||| ||||||||| | |||||| |
|
|
| T |
30203372 |
tgatgatgaatctcacaatggtatggaggtgaggattttcccatatttggagg |
30203320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 469
Target Start/End: Complemental strand, 26706930 - 26706450
Alignment:
| Q |
1 |
aacctcggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaat |
100 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||| ||||||| ||||||||||||||| ||| || ||||||||||| |||||| |||| | ||| |
|
|
| T |
26706930 |
aacctcggtggaaaactgagtatcgaaggcttaaaagatgttggcagtttatctgaagctcaagaagccaatttgatggggaaaaaaaacctcgaaaaat |
26706831 |
T |
|
| Q |
101 |
tatgcttgtcatggagatacaa-gaaggaat-----------ctacggtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtg |
188 |
Q |
| |
|
|||||||||||||| | |||| || ||| | | || | |||| |||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
26706830 |
tatgcttgtcatgggaaaacaatgatggatttaccaagccaccaactattagtgttgagcagctactcaaagtgcttcaacctcactcaaatctcaagtg |
26706731 |
T |
|
| Q |
189 |
cttggatataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtg |
288 |
Q |
| |
|
|||||| ||||| | ||| |||||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||| | | || || ||| ||||| |
|
|
| T |
26706730 |
cttggaaataaagtactacgacggattatcattaccaagttgggtaagtattcttagtaatttagtttctcttgaacttggggattgcaagaaatttgtg |
26706631 |
T |
|
| Q |
289 |
cggcttccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggta |
388 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
26706630 |
cggcttccgttacttggtaaactaccatctctagaaaaactggaattatcttctatggttaatctgaaatacttggatgatgatgaatctcaggatggca |
26706531 |
T |
|
| Q |
389 |
tggaggtgagggttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
26706530 |
tggaggtgagggttttcccatctctgaaggtactccacttatatgagttaccaaacatagaggggttattgaaagtggaaa |
26706450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 161; Significance: 1e-85; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 7 - 469
Target Start/End: Original strand, 20297114 - 20297588
Alignment:
| Q |
7 |
ggtggaaaactgcgtatccaaggattaaacaatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgct |
106 |
Q |
| |
|
|||||||||||| ||||| |||| ||||| ||||||| ||| ||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20297114 |
ggtggaaaactgagtatcaaaggcttaaaagatgttggcagtatatctgaagctcaagaagccaatttgatgggtaaaaaagaccttcatgaattatgct |
20297213 |
T |
|
| Q |
107 |
tgtcatggagatacaagaaggaatctacg------------gtcagtgctgagcaagtactcaaagagcttcaacctcactcaaatctcaagtgcttgga |
194 |
Q |
| |
|
|||| ||| | ||| | ||| ||| || ||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
20297214 |
tgtcttgggaaagcaatgataaatttaccaagccaccaactgtaagtgctgagaaagtactcgaagtgcttcaacctcagtcaaatctcaagtgcttgga |
20297313 |
T |
|
| Q |
195 |
tataaattgctatgacggattatcattaccaagttggataattattcttagtaatttaatttctcttcaacttttgaaatgtaacaaaattgtgcggctt |
294 |
Q |
| |
|
|||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||| || ||||| ||| || ||| ||||||||| |||| |
|
|
| T |
20297314 |
aataaattgctatgatggattgtggttaccaagttggataattattcttagtaatttagtttcttttgaacttgagaattgcaacgaaattgtgcagctt |
20297413 |
T |
|
| Q |
295 |
ccattacttggtaaactaccatctctnnnnnnnctgagattatcttatatggataatctgaaatacttggatgatgatgaatctgaggatggtatggagg |
394 |
Q |
| |
|
|| ||| ||||||||||||||||||| |||| | ||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
20297414 |
ccgttaattggtaaactaccatctctaaaaaaactgacaatatctggtatgtataatctgaaatacttggatgatgatgaatctcgggatggtagggagg |
20297513 |
T |
|
| Q |
395 |
tgagggttttcccatctctggaggaacttatattacgatacctaccaaacatagaggggttattgaaagtggaaa |
469 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| | |||| ||||||||||||||||||||||||||||| |
|
|
| T |
20297514 |
tgagggttttcccatctctggaggtactcgacttattttgtctacaaaacatagaggggttattgaaagtggaaa |
20297588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 469
Target Start/End: Complemental strand, 13615838 - 13615722
Alignment:
| Q |
353 |
tgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggaggaacttatattacgatacctaccaaacatagaggg |
452 |
Q |
| |
|
||||| ||||| |||| ||||||| ||| ||||| ||||| |||| |||||||||||||||||||||| ||| || | || |||||||| |||| | |
|
|
| T |
13615838 |
tgaaacacttgaatgaggatgaatttgaaaatggtgtggagatgagaattttcccatctctggaggaactaataatagaagacttaccaaacttagatag |
13615739 |
T |
|
| Q |
453 |
gttattgaaagtggaaa |
469 |
Q |
| |
|
||| || |||||||||| |
|
|
| T |
13615738 |
gttgttaaaagtggaaa |
13615722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 416
Target Start/End: Complemental strand, 52351175 - 52351128
Alignment:
| Q |
369 |
tgatgaatctgaggatggtatggaggtgagggttttcccatctctgga |
416 |
Q |
| |
|
|||||||||| | |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
52351175 |
tgatgaatctcacgatggtgtgggggtgagggttttcccatctctgga |
52351128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 7098974 - 7098896
Alignment:
| Q |
37 |
aatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatgga |
115 |
Q |
| |
|
|||||||||||||||||||||||| ||| || ||||| ||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
7098974 |
aatgttggtagtttatctgaagctaaagaagccaatttaatgggtaaaaaagacctcgatgaattatgcttgtcatgga |
7098896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 7582272 - 7582349
Alignment:
| Q |
37 |
aatgttggtagtttatctgaagctgaagcggctaatttgatgggtaaaaaagaccttcatcaattatgcttgtcatgg |
114 |
Q |
| |
|
||||| |||||||||||||||||| ||| || || |||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
7582272 |
aatgtcggtagtttatctgaagctcaagaagccaacttgatgggtaaaaaagacctcgatgaattatgcttgtcatgg |
7582349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 469
Target Start/End: Original strand, 7582597 - 7582713
Alignment:
| Q |
353 |
tgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttttcccatctctggaggaacttatattacgat-acctaccaaacatagagg |
451 |
Q |
| |
|
|||||||||||||||||||||||| | | ||||| |||| ||||| ||||||||||||| |||| ||||||| | ||| || |||||||| |||||| |
|
|
| T |
7582597 |
tgaaatacttggatgatgatgaatttcacaatggtttggaagtgagaattttcccatctcttgaggtacttataat-tgatgacttaccaaacttagagg |
7582695 |
T |
|
| Q |
452 |
ggttattgaaagtggaaa |
469 |
Q |
| |
|
|||| ||||||||||||| |
|
|
| T |
7582696 |
ggttgttgaaagtggaaa |
7582713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 7098649 - 7098589
Alignment:
| Q |
353 |
tgaaatacttggatgatgatgaatctgaggatggtatggaggtgagggttttcccatctct |
413 |
Q |
| |
|
||||||||||||||||| |||||| | | ||||||||||||| ||| ||||||||||||| |
|
|
| T |
7098649 |
tgaaatacttggatgataatgaatttcacaatggtatggaggtaaggattttcccatctct |
7098589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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