View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18658_high_9 (Length: 279)
Name: NF18658_high_9
Description: NF18658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18658_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 263
Target Start/End: Original strand, 40826757 - 40827000
Alignment:
| Q |
19 |
aataggatcatacgcaaacaaacttcacaatattacgttactcatgctacacataaaaccatactcaataacacaaacaaatcacaatgacttgctaata |
118 |
Q |
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| T |
40826757 |
aataggatcatacgcaaacaaacttcacaatattacgttactcatgctacacataaaaccatactcaataacacaaacaaatcacaatgacttgctaata |
40826856 |
T |
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| Q |
119 |
ttattaaatacaataatattataggatgaacaactaaatatannnnnnnngtgaaagaaactaaatacatatagtcatgctatagcatgaaaattatatt |
218 |
Q |
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| T |
40826857 |
ttattaaatactataatattataggatgaacaactaaatat-ttttttttgtgaaagaaactaaatatatatagtcatgctatagcatgaaaattatatt |
40826955 |
T |
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| Q |
219 |
actttatattcttgaagcgggcaacatcgatctctagtcttcctc |
263 |
Q |
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| T |
40826956 |
actttatattcttgaagcgggcaacatcgatctccagtcttcctc |
40827000 |
T |
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