View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18659_high_24 (Length: 241)
Name: NF18659_high_24
Description: NF18659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18659_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 9973605 - 9973832
Alignment:
| Q |
1 |
gatgaaatcatatatgttggaacatctactagaagtaatgtatcatactgagatacagaaagaacaaaaatataaaagatttattagcaatgcttgtgct |
100 |
Q |
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| T |
9973605 |
gatgaaatcatatatgttggaacatctactagaagtaatgtatcatactgagatacagaaagaacaaaaatataaaagatttattagcaatgcttgtgct |
9973704 |
T |
|
| Q |
101 |
ggcaagttaccatttttggttttggccatacttcttggtgtgcactactcaattatcttatcttgaattcttataatgctcattaacattatcttggtcg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
9973705 |
ggcaagttaccatttttggttttggccatacttcttggtgtgctctactcaattatcttatcttgaattcttataatactcattaacattatcttggtcg |
9973804 |
T |
|
| Q |
201 |
ttttcactctttccacaatgttgatatt |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
9973805 |
ttttcactctttccacaatgttgatatt |
9973832 |
T |
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