View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18659_low_22 (Length: 250)
Name: NF18659_low_22
Description: NF18659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18659_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 34 - 243
Target Start/End: Complemental strand, 48758233 - 48758024
Alignment:
| Q |
34 |
ttagtagaagagattgtttttgttaaaaggacagaatatataaactaaaaaacaatgttctacccaacaaaaaagagttatgaaaagaactcaagttcaa |
133 |
Q |
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| T |
48758233 |
ttagtagaagagattgtttttgttaaaaggacagaatatataaactaaaaaacaatgttctacccaacaaaaaagagttatgagaagaactcaagttcaa |
48758134 |
T |
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| Q |
134 |
aacatcacaacaataatacatcttcaaaacaagttgactttggtaggaattcaattaggaagtaatcttcaaacaaaaagagtgacatttcaaataatgt |
233 |
Q |
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| T |
48758133 |
aacattacaacaataatacatcttcaaaacaagttgactttggtaggaattcaattaggaagtaatcttcaaacaaaaagagtgacatttcaaataatgt |
48758034 |
T |
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| Q |
234 |
tagtattatc |
243 |
Q |
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||||| |||| |
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| T |
48758033 |
tagtaatatc |
48758024 |
T |
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