View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18659_low_29 (Length: 223)

Name: NF18659_low_29
Description: NF18659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18659_low_29
NF18659_low_29
[»] chr4 (22 HSPs)
chr4 (1-134)||(24706396-24706529)
chr4 (1-130)||(14261043-14261172)
chr4 (1-130)||(21310424-21310553)
chr4 (1-130)||(22321416-22321545)
chr4 (1-130)||(25704650-25704779)
chr4 (1-130)||(12071560-12071689)
chr4 (1-130)||(44568836-44568965)
chr4 (1-129)||(34324731-34324860)
chr4 (1-130)||(40122634-40122763)
chr4 (1-132)||(50767861-50767992)
chr4 (1-131)||(21661684-21661814)
chr4 (1-131)||(21670448-21670578)
chr4 (1-119)||(20249162-20249279)
chr4 (14-133)||(1988032-1988150)
chr4 (1-81)||(6129097-6129177)
chr4 (1-71)||(20714497-20714567)
chr4 (1-116)||(31892251-31892362)
chr4 (1-78)||(32543532-32543608)
chr4 (6-69)||(34284171-34284234)
chr4 (1-79)||(19692773-19692851)
chr4 (1-79)||(19703358-19703436)
chr4 (1-119)||(26676715-26676833)
[»] chr7 (15 HSPs)
chr7 (1-130)||(10981507-10981636)
chr7 (1-129)||(40348960-40349088)
chr7 (1-131)||(27813809-27813939)
chr7 (1-119)||(36453273-36453391)
chr7 (1-118)||(47110462-47110577)
chr7 (1-129)||(25614502-25614628)
chr7 (1-71)||(3091575-3091645)
chr7 (1-81)||(16662144-16662222)
chr7 (1-81)||(17636504-17636582)
chr7 (1-71)||(16360442-16360510)
chr7 (1-71)||(7743546-7743615)
chr7 (1-69)||(27942188-27942256)
chr7 (1-106)||(37983179-37983280)
chr7 (88-131)||(25060145-25060188)
chr7 (1-38)||(28200298-28200335)
[»] chr6 (17 HSPs)
chr6 (1-130)||(1605578-1605707)
chr6 (1-130)||(29260191-29260320)
chr6 (1-119)||(30734632-30734750)
chr6 (1-119)||(13757218-13757336)
chr6 (1-129)||(8626482-8626610)
chr6 (1-130)||(7761300-7761427)
chr6 (1-132)||(15064843-15064974)
chr6 (1-114)||(31559885-31559998)
chr6 (128-204)||(7228147-7228223)
chr6 (1-114)||(8235639-8235752)
chr6 (1-74)||(4129482-4129555)
chr6 (1-119)||(17942453-17942573)
chr6 (14-119)||(30734772-30734875)
chr6 (7-78)||(21277589-21277659)
chr6 (88-131)||(19996727-19996770)
chr6 (1-71)||(3798161-3798231)
chr6 (2-78)||(11370635-11370711)
[»] chr3 (25 HSPs)
chr3 (1-129)||(46694259-46694387)
chr3 (1-130)||(13364842-13364971)
chr3 (1-129)||(23088080-23088208)
chr3 (1-131)||(3383074-3383204)
chr3 (1-130)||(19241817-19241946)
chr3 (1-129)||(198855-198983)
chr3 (1-130)||(29375137-29375266)
chr3 (1-129)||(36881282-36881408)
chr3 (1-119)||(43750147-43750265)
chr3 (25-119)||(32835129-32835223)
chr3 (8-114)||(13702784-13702890)
chr3 (51-129)||(27707363-27707441)
chr3 (1-78)||(1455297-1455374)
chr3 (1-77)||(19897076-19897152)
chr3 (1-70)||(37780996-37781065)
chr3 (48-112)||(48820448-48820512)
chr3 (88-130)||(44277467-44277509)
chr3 (1-70)||(24064283-24064352)
chr3 (87-135)||(19912173-19912221)
chr3 (87-134)||(38806340-38806387)
chr3 (88-130)||(12094581-12094623)
chr3 (88-130)||(48963155-48963197)
chr3 (1-41)||(27707137-27707177)
chr3 (1-80)||(44522490-44522567)
chr3 (48-100)||(53559806-53559858)
[»] chr1 (30 HSPs)
chr1 (1-129)||(23045428-23045556)
chr1 (1-129)||(284333-284461)
chr1 (1-130)||(40783806-40783935)
chr1 (1-129)||(321626-321754)
chr1 (1-130)||(23526239-23526368)
chr1 (1-129)||(24772054-24772182)
chr1 (1-128)||(27211113-27211240)
chr1 (1-129)||(47038001-47038127)
chr1 (1-109)||(33082765-33082873)
chr1 (5-132)||(46771634-46771761)
chr1 (1-114)||(52037271-52037382)
chr1 (1-83)||(1749353-1749435)
chr1 (1-78)||(1837978-1838053)
chr1 (1-70)||(7765072-7765141)
chr1 (4-69)||(40562733-40562797)
chr1 (7-79)||(3657127-3657199)
chr1 (1-79)||(31003935-31004010)
chr1 (1-80)||(27143160-27143240)
chr1 (87-131)||(44227846-44227890)
chr1 (88-131)||(9588668-9588711)
chr1 (87-130)||(9589630-9589673)
chr1 (1-79)||(40261420-40261499)
chr1 (1-79)||(52478018-52478094)
chr1 (88-130)||(3943059-3943101)
chr1 (88-129)||(13985003-13985044)
chr1 (21-70)||(18396754-18396803)
chr1 (88-129)||(41959078-41959119)
chr1 (1-129)||(51064902-51065033)
chr1 (1-61)||(31061603-31061662)
chr1 (87-131)||(41959808-41959852)
[»] chr8 (22 HSPs)
chr8 (1-132)||(40058452-40058583)
chr8 (1-119)||(2540080-2540198)
chr8 (1-129)||(3585451-3585579)
chr8 (1-129)||(11174372-11174500)
chr8 (1-119)||(11646474-11646592)
chr8 (1-129)||(7146913-7147041)
chr8 (1-129)||(43275548-43275674)
chr8 (1-129)||(37345571-37345699)
chr8 (1-119)||(30999672-30999788)
chr8 (1-130)||(40918880-40919007)
chr8 (1-129)||(36068080-36068208)
chr8 (1-129)||(27034997-27035124)
chr8 (1-118)||(20546438-20546553)
chr8 (1-71)||(13881103-13881174)
chr8 (1-119)||(28562431-28562550)
chr8 (1-79)||(37510316-37510394)
chr8 (1-79)||(28326806-28326881)
chr8 (1-68)||(35866675-35866742)
chr8 (1-70)||(10181006-10181074)
chr8 (88-135)||(41307973-41308020)
chr8 (88-130)||(8697910-8697952)
chr8 (88-129)||(45278713-45278754)
[»] scaffold1431 (1 HSPs)
scaffold1431 (1-119)||(48-166)
[»] chr2 (13 HSPs)
chr2 (1-131)||(3518906-3519036)
chr2 (1-129)||(39938170-39938298)
chr2 (1-128)||(23366790-23366917)
chr2 (1-129)||(1102503-1102631)
chr2 (2-129)||(37673887-37674014)
chr2 (1-130)||(12969888-12970017)
chr2 (1-101)||(1646317-1646415)
chr2 (1-52)||(22388284-22388335)
chr2 (1-79)||(19976382-19976459)
chr2 (14-79)||(35179097-35179162)
chr2 (1-70)||(14779838-14779905)
chr2 (2-81)||(39562037-39562114)
chr2 (88-129)||(34224390-34224431)
[»] chr5 (17 HSPs)
chr5 (1-129)||(12807002-12807130)
chr5 (1-129)||(25773649-25773777)
chr5 (1-132)||(10285206-10285337)
chr5 (1-129)||(30720641-30720769)
chr5 (1-129)||(36561248-36561376)
chr5 (1-129)||(40886759-40886887)
chr5 (1-118)||(7277571-7277688)
chr5 (1-130)||(37900773-37900902)
chr5 (1-79)||(25683377-25683455)
chr5 (9-130)||(16983257-16983380)
chr5 (4-79)||(23098386-23098461)
chr5 (1-79)||(30403110-30403189)
chr5 (1-130)||(39070882-39071011)
chr5 (1-71)||(734487-734556)
chr5 (1-71)||(11319617-11319687)
chr5 (88-129)||(15305224-15305265)
chr5 (1-69)||(1056431-1056498)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-130)||(45453-45582)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-114)||(414-525)
[»] scaffold1770 (1 HSPs)
scaffold1770 (1-74)||(217-290)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-81)||(70872-70952)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-63)||(65312-65375)
[»] scaffold0257 (1 HSPs)
scaffold0257 (88-129)||(23467-23508)


Alignment Details
Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 24706396 - 24706529
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  24706396 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 24706495  T
Q  101 tagacatgtattttgaaaccgaaggagtatttga 134  Q
    | ||||||||||||||||| || |||||||||||    
T  24706496 tggacatgtattttgaaacggatggagtatttga 24706529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 14261172 - 14261043
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  14261172 aaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 14261073  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  14261072 tggacatgtattttgaaacggagggagtat 14261043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 21310553 - 21310424
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  21310553 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 21310454  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  21310453 tggacatgtattttgaaacggagggagtat 21310424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 22321416 - 22321545
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  22321416 aaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 22321515  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| ||||||||||    
T  22321516 tggacatgtattttgaaacggaaggagtat 22321545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 25704779 - 25704650
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  25704779 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 25704680  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  25704679 tggacatgtattttgaaacggagggagtat 25704650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 12071689 - 12071560
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||| |||||||||||||    
T  12071689 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaatttctccaaaa 12071590  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  12071589 tggacatgtattttgaaacggagggagtat 12071560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 44568965 - 44568836
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||| ||||||| |||||    
T  44568965 aaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggttagtgcaatttcttcaaaa 44568866  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| ||||||||||    
T  44568865 tggacatgtattttgaaacggaaggagtat 44568836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 34324731 - 34324860
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaattt-atttggtttcttgattagtgaaatttctccaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||| |||||| ||||||||||||    
T  34324731 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgcaatttctccaaa 34324830  T
Q  100 atagacatgtattttgaaaccgaaggagta 129  Q
    || ||||||||||||||||| || ||||||    
T  34324831 atggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40122634 - 40122763
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||| || |||||||||||||    
T  40122634 aaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggttactgcaatttctccaaaa 40122733  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  40122734 tggacatgtattttgaaacggagggagtat 40122763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 50767992 - 50767861
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  50767992 aaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatttctctaaaa 50767893  T
Q  101 tagacatgtattttgaaaccgaaggagtattt 132  Q
    |  | |||||||||||||| ||| ||||||||    
T  50767892 tgaatatgtattttgaaacggaatgagtattt 50767861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21661684 - 21661814
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| || |||||||||||||    
T  21661684 aaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggttactgcaatttctccaaaa 21661783  T
Q  101 tagacatgtattttgaaaccgaaggagtatt 131  Q
    | ||||||||||||||||  || ||||||||    
T  21661784 tggacatgtattttgaaagggagggagtatt 21661814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 21670448 - 21670578
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| || |||||||||||||    
T  21670448 aaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggttactgcaatttctccaaaa 21670547  T
Q  101 tagacatgtattttgaaaccgaaggagtatt 131  Q
    | ||||||||||||||||  || ||||||||    
T  21670548 tggacatgtattttgaaagggagggagtatt 21670578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 20249162 - 20249279
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||  ||||||||||||||||||||||||||||||| ||| |  ||||| |||||||    
T  20249162 aaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaatttatccaaaa 20249260  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  20249261 tggacatgtattttgaaac 20249279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 1988150 - 1988032
Alignment:
Q  14 ttaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaatagacatgtattt 113  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||| ||||||  ||| || ||||||||| |||||||||| |||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctcc-aaatagacatatattt 1988052  T
Q  114 tgaaaccgaaggagtatttg 133  Q
    | |||| || ||||||||||    
T  1988051 taaaacagatggagtatttg 1988032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6129097 - 6129177
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgat 81  Q
    |||||||||||||||||||||||| ||||||| | ||| | | |||||||||||||||||||||||||||| |||||||||    
T  6129097 aaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttgat 6129177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20714497 - 20714567
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaa-cacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    |||||||||||| |||||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  20714497 aaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttg 20714567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31892362 - 31892251
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| | || ||||||||||||||||||    || ||| ||||||||||| |||||||||||| ||||||| ||| || |||||||  ||||    
T  31892362 aaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggttactgcaatttctttaaaa 31892267  T
Q  101 tagacatgtattttga 116  Q
    |  |||||||||||||    
T  31892266 tgaacatgtattttga 31892251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32543608 - 32543532
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttctt 78  Q
    ||||||||||||||||||||||||||| |||| ||||| | | ||| ||||||| |||||||| ||||||||||||||    
T  32543608 aaataataaatgattaagggtattata-aaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 34284171 - 34284234
Alignment:
Q  6 ataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatt 69  Q
    |||||| |||||||||||||||||||| | ||| ||| ||| ||||||| ||||||||||||||    
T  34284171 ataaataattaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19692851 - 19692773
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    ||||||||||||| ||||| |||||||||||| ||||| | | ||| || |||||| |||| ||||||||| |||||||    
T  19692851 aaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19703436 - 19703358
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    ||||||||||||| ||||| |||||||||||| ||||| | | ||| || |||||| |||| ||||||||| |||||||    
T  19703436 aaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttg 19703358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26676715 - 26676833
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||| |||||||||||||||||| ||||  | | ||| || |||||| |||| ||||||||| || |||| |  ||| ||||||| |||||    
T  26676715 aaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaa 26676814  T
Q  101 tagacatgtattttgaaac 119  Q
    | || | ||||| ||||||    
T  26676815 tggataagtattgtgaaac 26676833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 3e-53; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 10981636 - 10981507
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  10981636 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 10981537  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  10981536 tggacatgtattttgaaacggagggagtat 10981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40349088 - 40348960
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  40349088 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaa 40348989  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| |||||||||    
T  40348988 tggacatgtattttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27813939 - 27813809
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  27813939 aaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 27813840  T
Q  101 tagacatgtattttgaaaccgaaggagtatt 131  Q
    | ||||||||||||||||| || ||||||||    
T  27813839 tggacatgtattttgaaacggagggagtatt 27813809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36453273 - 36453391
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  36453273 aaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggttagtgcaatttctccaaaa 36453372  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  36453373 tggacatgtattttgaaac 36453391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 47110577 - 47110462
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  47110577 aaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaatttctccaaaa 47110480  T
Q  101 tagacatgtattttgaaa 118  Q
    | ||||||||||||||||    
T  47110479 tggacatgtattttgaaa 47110462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 25614502 - 25614628
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||  |||||||||  ||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  25614502 aaataataaatgattaagggtatttcagaaaacac--acatattttcatcaaaaataacaaaatttatttggttttttggttagtgcaatttctccaaaa 25614599  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| |||||||||    
T  25614600 tggacatgtattttgaaacggaaggagta 25614628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3091645 - 3091575
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    |||||||||||| ||||||||||||||||||| ||||| | | ||| ||||||||||||||||||||||||    
T  3091645 aaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttg 3091575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 16662222 - 16662144
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgat 81  Q
    |||||||||||| |||||||||||||| |||| ||||| ||  ||| |||||||||||||||||||||||  |||||||||    
T  16662222 aaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttgat 16662144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17636582 - 17636504
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgat 81  Q
    |||||||||||| |||||||||||||| |||| ||||| ||  ||| |||||||||||||||||||||||  |||||||||    
T  17636582 aaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttgat 17636504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16360510 - 16360442
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    |||||||||||| ||||||||||||||||||  | ||||| | ||| ||||||||||||||||||||||||    
T  16360510 aaataataaatggttaagggtattatagaaa--aaacacagaatttcatcaaaaataacaaaatttatttg 16360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7743546 - 7743615
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    ||||||||||| ||||| |||||||||||||  | ||||||| ||| ||||||||||||||||||||||||    
T  7743546 aaataataaataattaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatttg 7743615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27942188 - 27942256
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatt 69  Q
    |||||||||||| |||| |||||||||||||| ||||||||| | | || |||||||| ||||||||||    
T  27942188 aaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37983280 - 37983179
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| |||| ||||||||| |||||| | |     ||| |||||||||||||||||||||||| |||||||||  ||| ||||||  |||||    
T  37983280 aaataataaatggttaaaggtattataaaaaacataaaa----tttcatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcctcaaaa 37983185  T
Q  101 tagaca 106  Q
    | ||||    
T  37983184 tggaca 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 25060145 - 25060188
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtatt 131  Q
    |||||||||||||| ||||||||||||||||| || ||||||||    
T  25060145 aatttctccaaaatggacatgtattttgaaacggagggagtatt 25060188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28200335 - 28200298
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacaca 38  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28200335 aaataataaatgattaaggatattatagaaaaaacaca 28200298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 3e-53; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 1605707 - 1605578
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  1605707 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 1605608  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  1605607 tggacatgtattttgaaacggagggagtat 1605578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29260320 - 29260191
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  29260320 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 29260221  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  29260220 tggacatgtattttgaaacggagggagtat 29260191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30734632 - 30734750
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  30734632 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 30734731  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  30734732 tggacatgtattttgaaac 30734750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13757336 - 13757218
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  13757336 aaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaatttctccaaaa 13757237  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  13757236 tggacatgtattttgaaac 13757218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8626610 - 8626482
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||| |||||    
T  8626610 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatttcttcaaaa 8626511  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  8626510 tggacatgtattttgaaacggagggagta 8626482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7761427 - 7761300
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  7761427 aaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaatttctccaaaa 7761330  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  7761329 tggacatgtattttgaaacggagggagtat 7761300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 15064843 - 15064974
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||  || |||||||| ||||    
T  15064843 aaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaatttctctaaaa 15064942  T
Q  101 tagacatgtattttgaaaccgaaggagtattt 132  Q
    | ||||||||||||||||| || |||||||||    
T  15064943 tggacatgtattttgaaacggagggagtattt 15064974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31559885 - 31559998
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||| ||| ||| || |||||||||||||    
T  31559885 aaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaatttctccaaaa 31559984  T
Q  101 tagacatgtatttt 114  Q
    | ||||||||||||    
T  31559985 tggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 7228147 - 7228223
Alignment:
Q  128 tatttgaacctcttataattcccaacatttatttcatacctcatcttatatttaactctctttttattacatccttt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7228147 tatttgaacctcttataattcccaacatttatttcatacctcatcttatatttaactctctttttattacatccttt 7228223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8235752 - 8235639
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| | | || |||||||||||| ||||||| |||||||| ||| || ||||||| |||||    
T  8235752 aaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaatttcttcaaaa 8235653  T
Q  101 tagacatgtatttt 114  Q
    |  |||||||||||    
T  8235652 tgtacatgtatttt 8235639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4129555 - 4129482
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtt 74  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  4129555 aaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtt 4129482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 17942573 - 17942453
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaat--aacaaaatttatttggtttcttgattagtgaaatttctccaa 98  Q
    |||||||||||| |||||||||||||||| ||||| |||||| ||| |||||||||  || ||||  |||||||||||||| ||| || |||||||| ||    
T  17942573 aaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggttactgcaatttctcaaa 17942474  T
Q  99 aatagacatgtattttgaaac 119  Q
    ||| |||||||||||||||||    
T  17942473 aatggacatgtattttgaaac 17942453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 30734772 - 30734875
Alignment:
Q  14 ttaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaatagacatgtattt 113  Q
    |||||||||||||||||||||||||  || ||| |||||||||||||||||||||||| ||| ||  ||| || ||||||| |||||| |||||||||||    
T  30734772 ttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtattt 30734869  T
Q  114 tgaaac 119  Q
    ||||||    
T  30734870 tgaaac 30734875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 21277589 - 21277659
Alignment:
Q  7 taaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttctt 78  Q
    ||||| |||||||||||||||||||| ||||| | ||||| || ||||||||||||||||||||| ||||||    
T  21277589 taaataattaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 19996727 - 19996770
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtatt 131  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  19996727 aatttctccaaaatagacatgtattttgaaacggagggagtatt 19996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3798231 - 3798161
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    ||||||||||||  ||||||| |||||||||| ||||| |||  || || |||||||||||||||||||||    
T  3798231 aaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttg 3798161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 11370635 - 11370711
Alignment:
Q  2 aataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttctt 78  Q
    ||||||||||| ||||| |||||||| |||| |||||   | | | |||||||||||||||||||||||| ||||||    
T  11370635 aataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 46694259 - 46694387
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46694259 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatttctccaaaa 46694358  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
      ||||||||||||||||| || ||||||    
T  46694359 aggacatgtattttgaaacggagggagta 46694387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 13364971 - 13364842
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  13364971 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 13364872  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    |  |||||||||||||||| || |||||||    
T  13364871 tgaacatgtattttgaaacggagggagtat 13364842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23088080 - 23088208
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  23088080 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcttcaaaa 23088179  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    ||||||| ||||||||||| || ||||||    
T  23088180 tagacatatattttgaaacagagggagta 23088208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3383204 - 3383074
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  3383204 aaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaa 3383105  T
Q  101 tagacatgtattttgaaaccgaaggagtatt 131  Q
    | ||||| ||||||||||| |||||||||||    
T  3383104 tggacatatattttgaaacggaaggagtatt 3383074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 19241817 - 19241946
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||||    
T  19241817 aaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcaccaaaa 19241916  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  19241917 tggacatgtattttgaaacggagggagtat 19241946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 198983 - 198855
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  198983 aaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtcagtgcaatttctccaaaa 198884  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  198883 tggacatgtattttgaaacggagggagta 198855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 29375266 - 29375137
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| || |||||||||||||    
T  29375266 aaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaatttctccaaaa 29375167  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  29375166 tggacatgtattttgaaacggagggagtat 29375137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36881408 - 36881282
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  36881408 aaataataaataattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 36881311  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  36881310 tggacatgtattttgaaacggagggagta 36881282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 43750265 - 43750147
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||| |  |||||||||||||    
T  43750265 aaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaatttctccaaaa 43750166  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  43750165 tggacatgtattttgaaac 43750147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 32835129 - 32835223
Alignment:
Q  25 atagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaatagacatgtattttgaaac 119  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| ||| || |||||||||||||| |||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaac 32835223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 13702890 - 13702784
Alignment:
Q  8 aaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaatagacat 107  Q
    ||||| |||| |||||||||||||||| ||| ||| ||| |||||||||| ||||||||||||||||||||| ||| || |||||||||||||||| |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  108 gtatttt 114  Q
    |||||||    
T  13702790 gtatttt 13702784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  51 aaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaatagacatgtattttgaaaccgaaggagta 129  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||||||| ||||||||||| ||||| || ||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttctt 78  Q
    |||||||||||| | ||| | ||||||||| | ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19897076 - 19897152
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttct 77  Q
    |||||||||| || |||||||||||||||||| ||||| | | ||| || ||||||||||||||||||||| |||||    
T  19897076 aaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37781065 - 37780996
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttattt 70  Q
    |||||||||||| ||||  ||||||||||||| ||||||| | ||| ||||||||||| |||||||||||    
T  37781065 aaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttattt 37780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 48820448 - 48820512
Alignment:
Q  48 atcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaatagacatgtatt 112  Q
    |||||||||||||||||||||||||||| |||  ||  | ||||||||||||||| |||||||||    
T  48820448 atcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 44277467 - 44277509
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtat 130  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  44277467 aatttctccaaaatagacatgtattttgaaacggagggagtat 44277509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24064352 - 24064283
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttattt 70  Q
    ||||||||||||  |||||||||||||||||| |||||   | |||||| ||| ||||||||||||||||    
T  24064352 aaataataaatgggtaagggtattatagaaaaaacacagtgaattttataaaatataacaaaatttattt 24064283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 19912173 - 19912221
Alignment:
Q  87 aaatttctccaaaatagacatgtattttgaaaccgaaggagtatttgaa 135  Q
    ||||||||| ||||| ||||||||||||||||| || ||||||||||||    
T  19912173 aaatttctctaaaatggacatgtattttgaaacggagggagtatttgaa 19912221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 38806340 - 38806387
Alignment:
Q  87 aaatttctccaaaatagacatgtattttgaaaccgaaggagtatttga 134  Q
    ||||||||| ||||| ||||||||||||||||| || |||||||||||    
T  38806340 aaatttctctaaaatggacatgtattttgaaacggagggagtatttga 38806387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 12094623 - 12094581
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtat 130  Q
    |||||||||||||| ||||||||||||||||| || |||||||    
T  12094623 aatttctccaaaatggacatgtattttgaaacggagggagtat 12094581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 48963197 - 48963155
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtat 130  Q
    ||||||||||||||||| |||||||||||||| || |||||||    
T  48963197 aatttctccaaaatagatatgtattttgaaacggagggagtat 48963155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27707137 - 27707177
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacat 41  Q
    |||||||||||| |||||| |||||||||||||||| ||||    
T  27707137 aaataataaatggttaaggatattatagaaaacacatacat 27707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44522567 - 44522490
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttga 80  Q
    |||||||||||| ||||  ||||||||||||| |||||  |  ||| || |||||||| |||||||||||| ||||||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacaca--tgatttcataaaaaataataaaatttatttgatttcttga 44522490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 53559806 - 53559858
Alignment:
Q  48 atcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||| ||||||||| |||||||||  ||| ||||||| |||||    
T  53559806 atcaaaaataacaacatttatttgttttcttgatatgtgtaatttcttcaaaa 53559858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23045428 - 23045556
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  23045428 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 23045527  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  23045528 tggacatgtattttgaaacggagggagta 23045556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 284461 - 284333
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  284461 aaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 284362  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  284361 tggacatgtattttgaaacggagggagta 284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40783806 - 40783935
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  40783806 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaa 40783905  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    |  |||||||||||||||| || |||||||    
T  40783906 tgaacatgtattttgaaacggagggagtat 40783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 321754 - 321626
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  321754 aaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 321655  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    |  |||||||||||||||| || ||||||    
T  321654 tgaacatgtattttgaaacggagggagta 321626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 23526368 - 23526239
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  23526368 aaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttctccaaaa 23526269  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    |  |||||||||||||||  ||||||||||    
T  23526268 tgaacatgtattttgaaatggaaggagtat 23526239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 24772054 - 24772182
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  24772054 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcttcaaaa 24772153  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  24772154 tggacatgtattttgaaacggagggagta 24772182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27211113 - 27211240
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  27211113 aaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaatttctccaaaa 27211212  T
Q  101 tagacatgtattttgaaaccgaaggagt 128  Q
    | ||||||||||||||||| || |||||    
T  27211213 tggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 47038001 - 47038127
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||  |||||  |||||||||||||    
T  47038001 aaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttgatttcttagttagtacaatttctccaaaa 47038098  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  47038099 tggacatgtattttgaaacggatggagta 47038127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 33082873 - 33082765
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  33082873 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaa 33082774  T
Q  101 tagacatgt 109  Q
    |||||||||    
T  33082773 tagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 46771761 - 46771634
Alignment:
Q  5 aataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaataga 104  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||| ||| || |||||||||||||| ||    
T  46771761 aataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaatttctccaaaatgga 46771662  T
Q  105 catgtattttgaaaccgaaggagtattt 132  Q
    ||||||||||||||| ||  ||||||||    
T  46771661 catgtattttgaaacggatagagtattt 46771634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 52037271 - 52037382
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||| |||||||||||||||||||  || ||||||||||||||| |||||||||||||||| |||  || || |||||||| ||||    
T  52037271 aaataataaatggttaagagtattatagaaaacacaca--taattttatcaaaaataataaaatttatttggttttttggataatgcaatttctctaaaa 52037368  T
Q  101 tagacatgtatttt 114  Q
    | ||||||||||||    
T  52037369 tggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1749435 - 1749353
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgatta 83  Q
    |||||||||||| |||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||||||||    
T  1749435 aaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttgatta 1749353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttctt 78  Q
    ||||||||||||  |||||||||||||||||| |||||  || ||| |||||||||||||||||||||||| ||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7765141 - 7765072
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttattt 70  Q
    |||||||||||| ||| ||||||||  ||||||||||| ||| ||| | |||||||||||||||||||||    
T  7765141 aaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  4 taataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatt 69  Q
    ||||||||| |||| |||||||||||||||||| | |||  |||||||||||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatata-atttatcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 3657199 - 3657127
Alignment:
Q  7 taaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||| |||||| |||||||||||| ||| ||| | ||| || ||||||||||||||||||||| |||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttg 3657127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31003935 - 31004010
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||||||||| ||||||||||||||||||| | ||||||| ||| || ||||||   |||||||||||| |||||||    
T  31003935 aaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttg 31004010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27143160 - 27143240
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaaca-cacacatatttttatcaaaaataacaaaatttatttggtttcttga 80  Q
    ||||||||||||||||||  |||||||||||| | | |||  | |||  ||||||||||||||||||||||| ||||||||    
T  27143160 aaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttga 27143240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 44227890 - 44227846
Alignment:
Q  87 aaatttctccaaaatagacatgtattttgaaaccgaaggagtatt 131  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||    
T  44227890 aaatttctccaaaatggacatgtattttgaaacggagggagtatt 44227846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 9588711 - 9588668
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtatt 131  Q
    |||||||||||||| ||||||||||||||||| || ||||||||    
T  9588711 aatttctccaaaatggacatgtattttgaaacggagggagtatt 9588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 9589630 - 9589673
Alignment:
Q  87 aaatttctccaaaatagacatgtattttgaaaccgaaggagtat 130  Q
    ||||||||| ||||||||||||||||||||||| || |||||||    
T  9589630 aaatttctctaaaatagacatgtattttgaaacggagggagtat 9589673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40261420 - 40261499
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaaca-cacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||||||||| |||| | |||||||||||| | |||||  | ||| ||||||| |||||||||||||||| |||||||    
T  40261420 aaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttg 40261499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 52478094 - 52478018
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||| ||||||  |||||| |||||||||||| ||||| |   ||| |||||||||||||||||||||||| |||||||    
T  52478094 aaatgataaatttttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttg 52478018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 3943101 - 3943059
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtat 130  Q
    |||||||||||||| ||||||||||||||||| || |||||||    
T  3943101 aatttctccaaaatggacatgtattttgaaacggagggagtat 3943059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 13985003 - 13985044
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagta 129  Q
    |||||||||||||| ||||||||||||||||| || ||||||    
T  13985003 aatttctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 18396803 - 18396754
Alignment:
Q  21 tattatagaaaacacacacatatttttatcaaaaataacaaaatttattt 70  Q
    ||||||||||||  |||||||| ||| || ||||||||||||||||||||    
T  18396803 tattatagaaaaaccacacataatttcataaaaaataacaaaatttattt 18396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 41959119 - 41959078
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagta 129  Q
    |||||||||||||| ||||||||||||||||| || ||||||    
T  41959119 aatttctccaaaatggacatgtattttgaaacggagggagta 41959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 51064902 - 51065033
Alignment:
Q  1 aaataataaatgattaagggtatt---atagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctcca 97  Q
    |||||||||| || ||||||||||   |||||||| ||||| | | ||| ||||||||| |||| ||||||||| || |||| |  ||| |||||||  |    
T  51064902 aaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttta 51065001  T
Q  98 aaatagacatgtattttgaaaccgaaggagta 129  Q
    |||| |||| ||||| |||||| || ||||||    
T  51065002 aaatggacaagtattgtgaaacggagggagta 51065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31061603 - 31061662
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaa 61  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||| ||| || |||||||||||    
T  31061603 aaataataaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 41959808 - 41959852
Alignment:
Q  87 aaatttctccaaaatagacatgtattttgaaaccgaaggagtatt 131  Q
    ||||||||| ||||| ||||||||||||||||| || ||||||||    
T  41959808 aaatttctctaaaatggacatgtattttgaaacggagggagtatt 41959852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 5e-52; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 40058452 - 40058583
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| |||    
T  40058452 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccgaaa 40058551  T
Q  101 tagacatgtattttgaaaccgaaggagtattt 132  Q
    | ||||||||||||||||| || |||||||||    
T  40058552 tggacatgtattttgaaacggagggagtattt 40058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2540080 - 2540198
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  2540080 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 2540179  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  2540180 tggacatgtattttgaaac 2540198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3585579 - 3585451
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  3585579 aaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 3585480  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  3585479 tggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11174372 - 11174500
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  11174372 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 11174471  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    |  |||||||||||||||| || ||||||    
T  11174472 tgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 11646474 - 11646592
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  11646474 aaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 11646573  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  11646574 tggacatgtattttgaaac 11646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7147041 - 7146913
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || ||||||| |||||    
T  7147041 aaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttcttcaaaa 7146942  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| |||||||||    
T  7146941 tggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 43275548 - 43275674
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  43275548 aaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 43275645  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  43275646 tggacatgtattttgaaacggagggagta 43275674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 37345699 - 37345571
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| || ||| ||||||| |||||    
T  37345699 aaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggttggtgcaatttcttcaaaa 37345600  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  37345599 tggacatgtattttgaaacggagggagta 37345571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30999672 - 30999788
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  30999672 aaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 30999769  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  30999770 ttgacatgtattttgaaac 30999788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40918880 - 40919007
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||  | |||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  40918880 aaataataaatgattaagggtattatagaaaacacaca--tgttttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 40918977  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  40918978 tggacatgtattttgaaacggagggagtat 40919007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36068208 - 36068080
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||| |||||  |||| ||||||||    
T  36068208 aaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggttagtacaattcctccaaaa 36068109  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  36068108 tggacatgtattttgaaacggagggagta 36068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 27035124 - 27034997
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||||||| |||| ||||||||||||||| ||| || |||||||||||||    
T  27035124 aaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaatttctccaaaa 27035026  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  27035025 tggacatgtattttgaaacggagggagta 27034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20546438 - 20546553
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||  |||||||||| ||| ||||||||||  || ||| |||||||||||||||||||||||  ||||||||||  || ||||||| |||||    
T  20546438 aaataataaattgttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgattgttgcaatttcttcaaaa 20546535  T
Q  101 tagacatgtattttgaaa 118  Q
    | ||||| ||||||||||    
T  20546536 tggacatatattttgaaa 20546553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13881103 - 13881174
Alignment:
Q  1 aaataataaatgattaagggtattatag-aaaacacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    |||||||||||||||||||||||||||| |||| || |||| | ||| ||||||||||||||||||||||||    
T  13881103 aaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttg 13881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 28562550 - 28562431
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaaca-cacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaa 99  Q
    |||| |||||||| |||||||||||||||||| | |||| | | ||| ||||||||| |||| ||||||||| || |||| |  ||| ||||||| ||||    
T  28562550 aaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 28562451  T
Q  100 atagacatgtattttgaaac 119  Q
    || |||| ||||||||||||    
T  28562450 atggacaagtattttgaaac 28562431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37510394 - 37510316
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    ||||| |||||||||||||||||||| ||||| | | | | | |||||| |||||||||||||||||||| ||||||||    
T  37510394 aaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttg 37510316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28326806 - 28326881
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||||||||  ||||| ||||||| |||||   ||||||| ||| |||||||||||||||||||||||| |||||||    
T  28326806 aaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttg 28326881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35866742 - 35866675
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttat 68  Q
    |||||||||||| ||||||||||||||||||| ||||| | | ||| || ||||||||||| ||||||    
T  35866742 aaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttat 35866675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10181006 - 10181074
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttattt 70  Q
    |||||||||||| |||| ||||||||| |||| ||| || || |||||| ||||||||||||||||||||    
T  10181006 aaataataaatggttaacggtattataaaaaa-acaaacgtaattttataaaaaataacaaaatttattt 10181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 41307973 - 41308020
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtatttgaa 135  Q
    |||||||||||||| ||||||||||||||||| || ||||||| ||||    
T  41307973 aatttctccaaaatggacatgtattttgaaacggagggagtatatgaa 41308020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 8697910 - 8697952
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagtat 130  Q
    |||||||||||||| ||||||||||||||||| || |||||||    
T  8697910 aatttctccaaaatggacatgtattttgaaacggagggagtat 8697952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 45278713 - 45278754
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagta 129  Q
    |||||||||||||| ||||||||||||||||| || ||||||    
T  45278713 aatttctccaaaatggacatgtattttgaaacggagggagta 45278754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 48 - 166
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  48 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 147  T
Q  101 tagacatgtattttgaaac 119  Q
    | |||||||||||||||||    
T  148 tggacatgtattttgaaac 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3519036 - 3518906
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  3519036 aaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 3518937  T
Q  101 tagacatgtattttgaaaccgaaggagtatt 131  Q
    | ||||||||||||||||| || ||||||||    
T  3518936 tggacatgtattttgaaacggagggagtatt 3518906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39938298 - 39938170
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  39938298 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 39938199  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | | ||||||||||||||| || ||||||    
T  39938198 tggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23366917 - 23366790
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  23366917 aaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 23366818  T
Q  101 tagacatgtattttgaaaccgaaggagt 128  Q
    | ||||||||||||||||| || |||||    
T  23366817 tggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 1102631 - 1102503
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  1102631 aaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaa 1102532  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  1102531 tggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 37673887 - 37674014
Alignment:
Q  2 aataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaat 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  102 agacatgtattttgaaaccgaaggagta 129  Q
      |||||||||||||||| || ||||||    
T  37673987 gaacatgtattttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12969888 - 12970017
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  12969888 aaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 12969987  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||||||||||||||||| || |||||||    
T  12969988 tggacatgtattttgaaacggagggagtat 12970017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1646415 - 1646317
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||| ||  || |||||||||||||    
T  1646415 aaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttgctgcaatttctccaaaa 1646318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 22388284 - 22388335
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaa 52  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22388284 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19976459 - 19976382
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||||||||   |||||||||||||||||| | ||||||| ||||||||||| || ||||||||||||| |||||||    
T  19976459 aaataataaataggtaagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttg 19976382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 35179097 - 35179162
Alignment:
Q  14 ttaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||| |||||||||||| ||||||| | ||| |||||||||||||||||||||||  |||||||    
T  35179097 ttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttg 35179162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14779905 - 14779838
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttattt 70  Q
    ||||||||||||| ||||  |||||||||||| ||||| ||| ||| ||||||||||| |||||||||||    
T  14779905 aaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttattt 14779838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 39562037 - 39562114
Alignment:
Q  2 aataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgat 81  Q
    ||||||||||| ||||||||||||  ||||| ||| | ||| |||  ||||||||||||||||||||||| ||| |||||    
T  39562037 aataataaatggttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatttgattttttgat 39562114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 34224390 - 34224431
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagta 129  Q
    |||||||||||||| ||||||||||||||||| || ||||||    
T  34224390 aatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 12807002 - 12807130
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  12807002 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatttctccaaaa 12807101  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  12807102 tggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25773777 - 25773649
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  25773777 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaa 25773678  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  25773677 tggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10285206 - 10285337
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| || |||||||||||||    
T  10285206 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggttaatgcaatttctccaaaa 10285305  T
Q  101 tagacatgtattttgaaaccgaaggagtattt 132  Q
    ||||||| ||||||||||| || |||||||||    
T  10285306 tagacatctattttgaaacggagggagtattt 10285337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 30720641 - 30720769
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  30720641 aaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 30720740  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  30720741 tggacatgtattttgaaacggagggagta 30720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36561248 - 36561376
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||| || ||||    
T  36561248 aaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttttctaaaa 36561347  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    | ||||||||||||||||| || ||||||    
T  36561348 tggacatgtattttgaaacggatggagta 36561376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 40886759 - 40886887
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||| |||||| |||||||||||||    
T  40886759 aaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggttagtgcaatttctccaaaa 40886858  T
Q  101 tagacatgtattttgaaaccgaaggagta 129  Q
    |  |||||||||||||||| || ||||||    
T  40886859 tgaacatgtattttgaaacggatggagta 40886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7277571 - 7277688
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||| |  |||||||||||||    
T  7277571 aaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaatttctccaaaa 7277670  T
Q  101 tagacatgtattttgaaa 118  Q
    ||||||||||||||||||    
T  7277671 tagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 37900773 - 37900902
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||| |||||||| ||| || |||||||||||||    
T  37900773 aaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaatttctccaaaa 37900872  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    | ||  ||||||||||||| || |||||||    
T  37900873 tggatgtgtattttgaaacggagggagtat 37900902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25683377 - 25683455
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25683377 aaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttg 25683455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 16983380 - 16983257
Alignment:
Q  9 aatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaat--ttatttggtttcttgattagtgaaatttctccaaaatagaca 106  Q
    |||| ||||||||||| ||||||| ||||| ||  ||| |||||||| || ||||   ||||||||||||||| ||| || |||||||||||||| ||||    
T  16983380 aatggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaatttctccaaaatggaca 16983281  T
Q  107 tgtattttgaaaccgaaggagtat 130  Q
    ||||||||||||| || |||||||    
T  16983280 tgtattttgaaacagagggagtat 16983257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 23098386 - 23098461
Alignment:
Q  4 taataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    ||||||||| ||||||||||||||| |||||  |||||| ||| ||||||||||||||||||||||| ||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 30403110 - 30403189
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacaca-cacatatttttatcaaaaataacaaaatttatttggtttcttg 79  Q
    |||||| ||||||||||| ||||||||||||| | | |||| | ||| ||||||||||||||||||||||||||||||||    
T  30403110 aaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttg 30403189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 39071011 - 39070882
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacac-acatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaa 99  Q
    ||||||||||||| |||||||||||||||||| |||| ||| | ||| ||||||||| |||| ||||||||| || ||| ||  ||| ||||||| ||||    
T  39071011 aaataataaatgagtaagggtattatagaaaaaacacaacaga-tttcatcaaaaatgacaacatttatttgattccttaatatgtgtaatttcttcaaa 39070913  T
Q  100 atagacatgtattttgaaaccgaaggagtat 130  Q
    ||  ||| ||||| |||||| || |||||||    
T  39070912 atgaacaagtattgtgaaacggagggagtat 39070882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 734487 - 734556
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    ||||||||||||| |||||||||||||||||| ||||| | | ||| ||||| ||| ||||||||||||||    
T  734487 aaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttg 734556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11319687 - 11319617
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttg 71  Q
    ||||||||||||| |||||||||||||||||| | ||| | | ||| || |||||| |||| |||||||||    
T  11319687 aaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttg 11319617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 15305224 - 15305265
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagta 129  Q
    |||||||||||||| ||||||||||||||||| || ||||||    
T  15305224 aatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1056431 - 1056498
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatt 69  Q
    |||||||||||||| ||  ||||||||||||| ||||| | | ||| || |||||||||||||||||||    
T  1056431 aaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttatt 1056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 45582 - 45453
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  45582 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaatttctccaaaa 45483  T
Q  101 tagacatgtattttgaaaccgaaggagtat 130  Q
    |  |||||||||||||||| || |||||||    
T  45482 tgaacatgtattttgaaacggagggagtat 45453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 414 - 525
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgattagtgaaatttctccaaaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||| ||| ||||||| || |||||| ||||||    
T  414 aaataataaatgattaagggtattataaaaaacacaca--taattttatcaaaaataacaaaatttatttgattttttgattactgcaatttcgccaaaa 511  T
Q  101 tagacatgtatttt 114  Q
    |  |||||||||||    
T  512 tgaacatgtatttt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 290 - 217
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtt 74  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  290 aaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtt 217  T

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Target: scaffold0056 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 70952 - 70872
Alignment:
Q  1 aaataataaatgattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttgat 81  Q
    |||||||||||| |||||||| ||| |||||| ||||||| | ||| |||||||||||||||||||||||| |||||||||    
T  70952 aaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttgat 70872  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 65312 - 65375
Alignment:
Q  1 aaataataaatgattaagggtattatag-aaaacacacacatatttttatcaaaaataacaaaa 63  Q
    |||||||||||| ||||||||||||||| |||| ||||| ||| ||| ||||||||||| ||||    
T  65312 aaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

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Target: scaffold0257 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 23508 - 23467
Alignment:
Q  88 aatttctccaaaatagacatgtattttgaaaccgaaggagta 129  Q
    |||||||||||||| ||||||||||||||||| || ||||||    
T  23508 aatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

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