View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1865_low_11 (Length: 248)

Name: NF1865_low_11
Description: NF1865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1865_low_11
NF1865_low_11
[»] chr7 (30 HSPs)
chr7 (1-236)||(42805303-42805538)
chr7 (18-173)||(42762919-42763070)
chr7 (175-236)||(32758214-32758275)
chr7 (176-236)||(21172128-21172188)
chr7 (176-236)||(42798623-42798683)
chr7 (174-236)||(48735242-48735304)
chr7 (176-236)||(7193039-7193099)
chr7 (174-230)||(35334941-35334997)
chr7 (176-236)||(46354148-46354208)
chr7 (176-236)||(47077974-47078034)
chr7 (177-236)||(18326989-18327048)
chr7 (175-236)||(2541140-2541202)
chr7 (174-236)||(42495956-42496018)
chr7 (179-231)||(29140486-29140538)
chr7 (175-230)||(42476826-42476881)
chr7 (194-236)||(11617709-11617751)
chr7 (176-230)||(21447544-21447598)
chr7 (172-229)||(12473254-12473311)
chr7 (176-229)||(43557426-43557479)
chr7 (177-229)||(5180285-5180337)
chr7 (176-236)||(47716413-47716473)
chr7 (181-236)||(7794627-7794682)
chr7 (176-227)||(22699100-22699151)
chr7 (179-214)||(25198679-25198714)
chr7 (174-216)||(34626348-34626390)
chr7 (182-236)||(40463837-40463891)
chr7 (183-236)||(10693192-10693245)
chr7 (180-221)||(14732958-14732999)
chr7 (175-236)||(28078252-28078313)
chr7 (194-230)||(1424037-1424073)
[»] chr8 (25 HSPs)
chr8 (175-236)||(28817747-28817808)
chr8 (175-236)||(36720749-36720810)
chr8 (176-236)||(35261633-35261693)
chr8 (176-229)||(7136657-7136710)
chr8 (175-236)||(30454216-30454277)
chr8 (176-236)||(12670369-12670429)
chr8 (176-236)||(24245405-24245465)
chr8 (174-236)||(25250474-25250536)
chr8 (174-236)||(39461117-39461179)
chr8 (175-236)||(13160655-13160716)
chr8 (176-236)||(20869617-20869677)
chr8 (176-236)||(29521806-29521866)
chr8 (176-236)||(44530103-44530163)
chr8 (185-236)||(28407379-28407430)
chr8 (174-236)||(2626471-2626533)
chr8 (175-236)||(17823529-17823590)
chr8 (176-236)||(26954086-26954146)
chr8 (176-236)||(45071219-45071279)
chr8 (174-236)||(6760775-6760836)
chr8 (174-216)||(23286434-23286476)
chr8 (175-236)||(18164880-18164941)
chr8 (175-216)||(40605046-40605087)
chr8 (180-236)||(20284194-20284250)
chr8 (180-236)||(21070823-21070879)
chr8 (197-229)||(40607852-40607884)
[»] chr5 (17 HSPs)
chr5 (171-236)||(41014268-41014333)
chr5 (175-236)||(37024675-37024736)
chr5 (176-236)||(24448844-24448904)
chr5 (176-236)||(35710267-35710327)
chr5 (179-236)||(4619227-4619284)
chr5 (175-236)||(38879534-38879595)
chr5 (175-236)||(22600407-22600468)
chr5 (175-236)||(23974734-23974794)
chr5 (179-236)||(43334159-43334216)
chr5 (176-228)||(1565385-1565437)
chr5 (179-236)||(27328709-27328766)
chr5 (176-236)||(8170103-8170163)
chr5 (181-216)||(31299591-31299626)
chr5 (176-214)||(19438703-19438741)
chr5 (177-221)||(2838733-2838777)
chr5 (175-235)||(22187238-22187298)
chr5 (174-214)||(41956884-41956924)
[»] chr4 (24 HSPs)
chr4 (176-236)||(13256518-13256578)
chr4 (176-236)||(47528649-47528709)
chr4 (176-236)||(21646918-21646978)
chr4 (174-236)||(48598944-48599006)
chr4 (175-236)||(5648212-5648273)
chr4 (175-236)||(6430746-6430807)
chr4 (172-236)||(5306784-5306848)
chr4 (176-236)||(23501747-23501807)
chr4 (176-236)||(37494805-37494865)
chr4 (174-236)||(5313115-5313177)
chr4 (175-229)||(20224937-20224991)
chr4 (176-230)||(20405047-20405101)
chr4 (183-236)||(16408724-16408777)
chr4 (173-230)||(29879624-29879681)
chr4 (175-236)||(30639333-30639394)
chr4 (176-236)||(10660358-10660418)
chr4 (176-236)||(10874503-10874563)
chr4 (176-236)||(11054267-11054327)
chr4 (175-230)||(14590790-14590845)
chr4 (176-230)||(55766593-55766647)
chr4 (179-236)||(16911519-16911576)
chr4 (179-236)||(17315419-17315476)
chr4 (176-230)||(55830848-55830902)
chr4 (179-216)||(18969698-18969735)
[»] chr1 (28 HSPs)
chr1 (176-236)||(20004213-20004273)
chr1 (176-236)||(46991781-46991841)
chr1 (176-236)||(18944620-18944680)
chr1 (175-236)||(8197019-8197080)
chr1 (175-236)||(34725217-34725278)
chr1 (176-236)||(45812656-45812716)
chr1 (176-229)||(22930195-22930248)
chr1 (175-236)||(27474257-27474318)
chr1 (175-236)||(34714599-34714660)
chr1 (170-235)||(41319928-41319993)
chr1 (174-230)||(14617013-14617069)
chr1 (173-229)||(19932880-19932936)
chr1 (176-236)||(32632677-32632737)
chr1 (176-236)||(47214488-47214548)
chr1 (194-236)||(23768441-23768483)
chr1 (175-229)||(27201623-27201677)
chr1 (178-236)||(40424721-40424779)
chr1 (195-236)||(6925096-6925137)
chr1 (176-216)||(10668197-10668237)
chr1 (181-229)||(18742089-18742137)
chr1 (180-236)||(19414420-19414476)
chr1 (176-236)||(38478401-38478461)
chr1 (176-236)||(46248074-46248134)
chr1 (196-235)||(4430148-4430187)
chr1 (179-230)||(25290143-25290194)
chr1 (185-236)||(52910204-52910254)
chr1 (182-236)||(30395849-30395903)
chr1 (182-235)||(12126957-12127010)
[»] chr2 (25 HSPs)
chr2 (175-236)||(25079839-25079900)
chr2 (176-236)||(8455437-8455497)
chr2 (176-236)||(17705449-17705509)
chr2 (174-229)||(23397718-23397773)
chr2 (178-236)||(11514392-11514450)
chr2 (175-236)||(14530271-14530332)
chr2 (176-236)||(5840982-5841042)
chr2 (176-236)||(12024039-12024099)
chr2 (168-236)||(21779380-21779448)
chr2 (173-236)||(22371008-22371071)
chr2 (171-236)||(10543647-10543712)
chr2 (177-236)||(24200746-24200805)
chr2 (193-236)||(44604825-44604868)
chr2 (194-236)||(17667974-17668016)
chr2 (174-236)||(25249858-25249920)
chr2 (175-221)||(39189557-39189603)
chr2 (177-234)||(14544018-14544075)
chr2 (176-224)||(9671134-9671182)
chr2 (182-229)||(27573581-27573628)
chr2 (197-236)||(40416992-40417031)
chr2 (194-236)||(17623536-17623578)
chr2 (178-236)||(19977835-19977893)
chr2 (196-230)||(39914433-39914467)
chr2 (176-229)||(7214488-7214541)
chr2 (178-230)||(17896215-17896267)
[»] chr3 (21 HSPs)
chr3 (176-236)||(13730725-13730785)
chr3 (176-236)||(52926331-52926391)
chr3 (174-236)||(8247810-8247872)
chr3 (175-229)||(40272940-40272994)
chr3 (171-236)||(4495785-4495850)
chr3 (176-236)||(10870072-10870132)
chr3 (177-233)||(25517297-25517353)
chr3 (177-236)||(29366843-29366902)
chr3 (174-236)||(1217064-1217126)
chr3 (175-236)||(7697006-7697067)
chr3 (175-236)||(16735416-16735477)
chr3 (175-236)||(39203491-39203552)
chr3 (176-236)||(46421158-46421218)
chr3 (175-229)||(9607178-9607232)
chr3 (194-236)||(26869701-26869743)
chr3 (176-221)||(6411957-6412002)
chr3 (176-236)||(12914156-12914216)
chr3 (174-236)||(13628913-13628976)
chr3 (175-236)||(5173841-5173903)
chr3 (174-215)||(9276248-9276289)
chr3 (175-236)||(22609742-22609802)
[»] scaffold0168 (1 HSPs)
scaffold0168 (176-236)||(30533-30593)
[»] chr6 (15 HSPs)
chr6 (176-236)||(1346918-1346978)
chr6 (176-236)||(1354876-1354936)
chr6 (176-228)||(1941809-1941861)
chr6 (170-230)||(14975207-14975267)
chr6 (174-230)||(8409195-8409251)
chr6 (173-236)||(9161074-9161137)
chr6 (178-236)||(3815198-3815256)
chr6 (179-232)||(32728281-32728334)
chr6 (180-236)||(20400625-20400681)
chr6 (176-236)||(33922949-33923009)
chr6 (194-236)||(12222038-12222080)
chr6 (179-236)||(12063424-12063481)
chr6 (187-236)||(14553477-14553525)
chr6 (180-229)||(24734591-24734640)
chr6 (194-230)||(6024205-6024241)
[»] scaffold0311 (1 HSPs)
scaffold0311 (185-236)||(10773-10824)
[»] scaffold0057 (1 HSPs)
scaffold0057 (174-229)||(24895-24950)
[»] scaffold0024 (1 HSPs)
scaffold0024 (174-236)||(83827-83889)
[»] scaffold0005 (1 HSPs)
scaffold0005 (175-230)||(226533-226588)
[»] scaffold0258 (1 HSPs)
scaffold0258 (178-236)||(13144-13202)
[»] scaffold0187 (4 HSPs)
scaffold0187 (175-236)||(8898-8959)
scaffold0187 (179-236)||(10169-10226)
scaffold0187 (175-236)||(19226-19287)
scaffold0187 (179-236)||(20497-20554)
[»] scaffold0116 (1 HSPs)
scaffold0116 (196-236)||(8865-8905)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 42805303 - 42805538
Alignment:
Q  1 atgagctctctgtttatgccaaactgcatatcaaagtaaatttatacttcnnnnnnngtttctttaaatggagggctgttcatttagttatttctttctt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  42805303 atgagctctttgtttatgccaaactgcatatcaaagtaaatttatacttctttttttgtttctttaaatggagggctgttcatttagttatttctttctt 42805402  T
Q  101 ttataacatggttgcataatttcctattaattgcgtatcaaatgttttaattttattagggaaaattataaaaatgaggggtaaccttggtgtaactggt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  42805403 ttataacatggttgcataatttcctattaattgcgtatcaaatgttttaattttattagtgaaaattataaaaatgaggggtaaccttggcgtaactggt 42805502  T
Q  201 aaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| ||||||||||||| |||||    
T  42805503 aaagttgttgtcatgtgactggaaggtcacgggttc 42805538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 42762919 - 42763070
Alignment:
Q  18 gccaaactgcatatcaaagtaaatttatacttcnnnnnnngtttctttaaatggagggctgttcatttagttatttctttcttttataacatggttgcat 117  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42762919 gccaaactgcatatcaaagtaaatttatactatcttttttgtttctttaaatggagagctgttcatttagttatttctttcttttataacatggttgcat 42763018  T
Q  118 aatttcctattaattgcgtatcaaatgttttaattttattagggaaaattataaaa 173  Q
    |    ||| |||| || |||||||||||||||||||||||||  ||||||||||||    
T  42763019 a----cctcttaactgtgtatcaaatgttttaattttattagtaaaaattataaaa 42763070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 32758214 - 32758275
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||||    
T  32758214 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttc 32758275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 21172188 - 21172128
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttc 21172128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 42798623 - 42798683
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 42798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 48735304 - 48735242
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  48735304 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 48735242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 7193039 - 7193099
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||| |||||||| |||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttc 7193099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 35334997 - 35334941
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  35334997 atgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 35334941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 46354148 - 46354208
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| | ||||||||||| |||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttc 46354208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 47078034 - 47077974
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 47077974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 18326989 - 18327048
Alignment:
Q  177 aggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||| | ||||||||||||||||||||||| ||| ||||||||| |||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttc 18327048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 2541202 - 2541140
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactgg-aaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||| |||||||| |||||    
T  2541202 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttc 2541140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 42496018 - 42495956
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | ||||||||||||||||||||| | |||| |||||||| |||||    
T  42496018 atgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttc 42495956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 29140538 - 29140486
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcaca 231  Q
    |||||| ||||| | |||||||||||||||||||||||||||| |||||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcaca 29140486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 42476826 - 42476881
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||  ||||||||    
T  42476826 tgaggggtaacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcac 42476881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 11617751 - 11617709
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  11617751 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttc 11617709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 21447544 - 21447598
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||| | ||||| |||| |||||||||||||| |||||||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcac 21447598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 12473254 - 12473311
Alignment:
Q  172 aaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||||| |||||| | ||| |||||||||||||||||||| ||| |||||||    
T  12473254 aaatgaggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtca 12473311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 43557426 - 43557479
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||| |||||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtca 43557479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 5180337 - 5180285
Alignment:
Q  177 aggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||||||  | ||||||||||||||||||||||| |||| |||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtca 5180285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 47716413 - 47716473
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||   |||||| |||||||||| ||||| ||||||||||||| |||||    
T  47716413 gaggggtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttc 47716473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 7794682 - 7794627
Alignment:
Q  181 gtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||| | | |||||||||||||||||| |||| ||||||||||||| |||||    
T  7794682 gtaaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttc 7794627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 22699151 - 22699100
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggt 227  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||| |||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggt 22699100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 25198679 - 25198714
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcat 214  Q
    |||||||||||| |||||||||||||||||||||||    
T  25198679 gggtaaccttggcgtaactggtaaagttgttgtcat 25198714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 34626390 - 34626348
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgt 216  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  34626390 atgaggggtaaccttagcgcaactggtaaagttgttgtcatgt 34626348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 40463837 - 40463891
Alignment:
Q  182 taaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||| | ||| ||||||||||||||||||| |||| |||||||| |||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttc 40463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 10693245 - 10693192
Alignment:
Q  183 aaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||| | |||| |||||||||||||||||| |||| |||||||| |||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttc 10693192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 14732999 - 14732958
Alignment:
Q  180 ggtaaccttggtgtaactggtaaagttgttgtcatgtaactg 221  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 14732958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 28078313 - 28078252
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||| ||| | |||| || ||||||||||||||| |||| |||||||| |||||    
T  28078313 tgaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttc 28078252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 1424073 - 1424037
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    |||||||||||||||||| |||| |||||||||||||    
T  1424073 aactggtaaagttgttgttatgtgactggaaggtcac 1424037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 28817808 - 28817747
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  28817808 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 28817747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 36720749 - 36720810
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||    
T  36720749 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 36720810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 35261633 - 35261693
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 35261693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 7136710 - 7136657
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtca 7136657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 30454277 - 30454216
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  30454277 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 30454216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 12670429 - 12670369
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 12670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 24245405 - 24245465
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 24245465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 25250474 - 25250536
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||| |||||||||||   ||||||||||||||||||||||| |||||||||||||| ||||    
T  25250474 atgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttc 25250536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 39461179 - 39461117
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | ||||||||||||||||||||||  |||| |||||||| |||||    
T  39461179 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttc 39461117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 13160655 - 13160716
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||| || | ||||||||||||||||||||||| |||| |||||||| |||||    
T  13160655 tgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttc 13160716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 20869677 - 20869617
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||| ||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 20869617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 29521866 - 29521806
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||| ||||||||||||| ||| ||||||||||||| |||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttc 29521806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 44530103 - 44530163
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | |||||||||||||| |||||||| ||| ||||||||| |||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttc 44530163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 28407379 - 28407430
Alignment:
Q  185 ccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 28407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 2626471 - 2626533
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | || |||||||||||||||||||| || | |||||||| |||||    
T  2626471 atgaggggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttc 2626533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 17823529 - 17823590
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||| ||||| | ||||||||||||||||||||||| || | |||||||| |||||    
T  17823529 tgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttc 17823590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 26954086 - 26954146
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||| |||| |||| |||||||||||||||||||| | | ||||||||| |||||    
T  26954086 gaggggtaactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttc 26954146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 45071219 - 45071279
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| |  |||||||||||||||||||||| | || |||||||| |||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttc 45071279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 6760775 - 6760836
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||| |||| | ||||||||||||||||||||| | ||| ||||||||| |||||    
T  6760775 atgaggggtaac-ttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttc 6760836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 23286476 - 23286434
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgt 216  Q
    ||||||||||||||||  | |||||||||||||||||||||||    
T  23286476 atgaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 23286434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 18164941 - 18164880
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||| ||||| | ||| ||| ||||||||||||||| |||| |||||||| |||||    
T  18164941 tgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttc 18164880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 40605087 - 40605046
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgt 216  Q
    ||||||||||| |||| | |||||||||||||||||||||||    
T  40605087 tgaggggtaactttggcgcaactggtaaagttgttgtcatgt 40605046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 20284250 - 20284194
Alignment:
Q  180 ggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||  | ||| ||||||||||||||||||| |||| |||||||| |||||    
T  20284250 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttc 20284194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 21070879 - 21070823
Alignment:
Q  180 ggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||  | ||| ||||||||||||||||||| |||| |||||||| |||||    
T  21070879 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttc 21070823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 40607884 - 40607852
Alignment:
Q  197 tggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||||||||||||||||||||| ||||    
T  40607884 tggtaaagttgttgtcatgtaactggaatgtca 40607852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 41014268 - 41014333
Alignment:
Q  171 aaaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  41014268 aaaatgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 41014333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 37024736 - 37024675
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||    
T  37024736 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 37024675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 24448844 - 24448904
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 24448904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 35710267 - 35710327
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttc 35710327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 4619284 - 4619227
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 4619227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 38879534 - 38879595
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  38879534 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 38879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 22600407 - 22600468
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||  |||||||||||||||||| |||||| |||||||||| || |||||    
T  22600407 tgaggggtaaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttc 22600468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 23974734 - 23974794
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||| ||||||||||||||||||| ||||||||||||| |||||    
T  23974734 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttc 23974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 43334159 - 43334216
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 43334216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 1565385 - 1565437
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtc 228  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| ||||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtc 1565437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 27328709 - 27328766
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||  | || |||||||||||||||||||| |||| ||||||||||||||    
T  27328709 gggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttc 27328766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 8170163 - 8170103
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||| ||||||||| | ||||||||||||||||||||||| || | |||||||| |||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttc 8170103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 31299591 - 31299626
Alignment:
Q  181 gtaaccttggtgtaactggtaaagttgttgtcatgt 216  Q
    |||||||||||| |||||||||||||||||||||||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgt 31299626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 19438703 - 19438741
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcat 214  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcat 19438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 2838733 - 2838777
Alignment:
Q  177 aggggtaaccttggtgtaactggtaaagttgttgtcatgtaactg 221  Q
    |||||||||||||| | ||| ||||||||||||||||||| ||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactg 2838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 22187238 - 22187298
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggtt 235  Q
    ||||||||||| |||| | |||| |||||||||||||||| | |||| |||||||| ||||    
T  22187238 tgaggggtaactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtt 22187298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 41956884 - 41956924
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcat 214  Q
    |||||||||||| |||| | |||||||||||||||||||||    
T  41956884 atgaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 13256578 - 13256518
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  13256578 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttc 13256518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 47528709 - 47528649
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttc 47528649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 21646918 - 21646978
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttc 21646978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 48599006 - 48598944
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  48599006 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 48598944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 5648212 - 5648273
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  5648212 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttc 5648273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 6430807 - 6430746
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  6430807 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 6430746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 5306848 - 5306784
Alignment:
Q  172 aaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||| | |||||||||||||| |||||||| |||| |||||||| |||||    
T  5306848 aaatgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttc 5306784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 23501747 - 23501807
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 23501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 37494805 - 37494865
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||||||||    
T  37494805 gaggggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttc 37494865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 5313177 - 5313115
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||| |||||||||||| ||||||||||||||||||||||||| | || |||||||| |||||    
T  5313177 atgacgggtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttc 5313115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 20224937 - 20224991
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||    
T  20224937 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 20224991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 20405047 - 20405101
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||||||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcac 20405101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 16408777 - 16408724
Alignment:
Q  183 aaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 16408724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 29879681 - 29879624
Alignment:
Q  173 aatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||| ||| |||||||||    
T  29879681 aatgaggggtaacattggtgcaactgataaagttgttgtcatgtgactagaaggtcac 29879624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 30639333 - 30639394
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||| ||| |||| |||||||| |||||    
T  30639333 tgaggggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttc 30639394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 10660358 - 10660418
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| ||||| ||| ||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttc 10660418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 10874503 - 10874563
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| ||||| ||| ||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttc 10874563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 11054327 - 11054267
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||| |||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 11054267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 14590790 - 14590845
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    |||| ||||||||||| | ||||||||||||||||||||||| |||| ||||||||    
T  14590790 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 14590845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 55766647 - 55766593
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||  | ||||||||||||||||||||||| || ||||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcac 55766593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 16911519 - 16911576
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||| | ||||||||||||||||||||||| |||  |||||||| |||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttc 16911576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 17315476 - 17315419
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||| | ||| ||||||||||||||||||| |||| |||||||| |||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttc 17315419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 55830902 - 55830848
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||  | ||||||||||||||||||||||| |  ||||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgatcggaaggtcac 55830848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 18969698 - 18969735
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgt 216  Q
    |||||||||||| | |||||||||||||||||||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgt 18969735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 20004273 - 20004213
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 20004213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 46991781 - 46991841
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 46991841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 18944620 - 18944680
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttc 18944680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 8197019 - 8197080
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||| |||||    
T  8197019 tgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttc 8197080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 34725278 - 34725217
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  34725278 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 34725217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 45812716 - 45812656
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||| ||||||||||||||||| |||| ||||||||||||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttc 45812656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 22930248 - 22930195
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 22930195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 27474257 - 27474318
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||| |   ||||||||||||||||||||||| |||| ||||||||||||||    
T  27474257 tgaggggtaaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttc 27474318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 34714599 - 34714660
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| | || |||||||| |||||    
T  34714599 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttc 34714660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 41319993 - 41319928
Alignment:
Q  170 aaaaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggtt 235  Q
    |||| |||||||||||||||    ||||||||||||||||||||||| |||| |||||||||||||    
T  41319993 aaaattgaggggtaaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtt 41319928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 14617013 - 14617069
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||||| | ||| ||||||||||||||||||| |||| ||||||||    
T  14617013 atgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcac 14617069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 19932936 - 19932880
Alignment:
Q  173 aatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||| ||||||| | ||||||||||||||||||||||| |||| |||||||    
T  19932936 aatgaggggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 19932880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 32632737 - 32632677
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||| | |||| |||||||| |||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttc 32632677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 47214488 - 47214548
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||| |||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 47214548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 23768483 - 23768441
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  23768483 aactggtaaagttgttgtcatgtgactgtaaggtcacaggttc 23768441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 27201623 - 27201677
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||||||| | |||| |||||||||||||||||||| |||| |||||||    
T  27201623 tgaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtca 27201677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 40424721 - 40424779
Alignment:
Q  178 ggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||| | ||||||||||||||||||||||| |||| |||| ||| |||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttc 40424779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 6925096 - 6925137
Alignment:
Q  195 actggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttc 6925137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 10668197 - 10668237
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgt 216  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 10668237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 18742137 - 18742089
Alignment:
Q  181 gtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||| | ||||||||||||||||||||||| |||| |||||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 18742089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 19414420 - 19414476
Alignment:
Q  180 ggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||| |||| |||||||||||||||||| | |||| |||||||| |||||    
T  19414420 ggtaaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttc 19414476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 38478461 - 38478401
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | |||| ||||| |||||||||||| |||| |||||||| |||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttc 38478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 46248134 - 46248074
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||   ||||||||||||||||||||||| |||| || ||||| |||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttc 46248074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 4430187 - 4430148
Alignment:
Q  196 ctggtaaagttgttgtcatgtaactggaaggtcacaggtt 235  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  4430187 ctggtaaagttgttgtcatgtgactggaaggtcacgggtt 4430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 25290143 - 25290194
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    |||||||||||| | ||| ||||||||||||||||||| |||| ||||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcac 25290194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 52910204 - 52910254
Alignment:
Q  185 ccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||| ||| ||||||||||||||||||| |||| ||||||||||||||    
T  52910204 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacaggttc 52910254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 30395903 - 30395849
Alignment:
Q  182 taaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||| | ||||||||||||||||||||||| |||  |||||||| |||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttc 30395849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 12127010 - 12126957
Alignment:
Q  182 taaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggtt 235  Q
    ||||||||| | |||| |||||||||||||||||||| || |||||||| ||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtt 12126957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 25079900 - 25079839
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  25079900 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 25079839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 8455497 - 8455437
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 8455437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 17705449 - 17705509
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttc 17705509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 23397718 - 23397773
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  23397718 atgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtca 23397773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 11514392 - 11514450
Alignment:
Q  178 ggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 11514450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 14530271 - 14530332
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  14530271 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 14530332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 5840982 - 5841042
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| || || ||||||||||||||||| ||||||||||||| |||||    
T  5840982 gaggggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttc 5841042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 12024099 - 12024039
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 12024039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 21779448 - 21779380
Alignment:
Q  168 ataaaaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||| |||||||||||||||| | ||||||| ||||||||||||||| |||| |||||||| |||||    
T  21779448 ataaaagtgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttc 21779380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 22371008 - 22371071
Alignment:
Q  173 aatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||   ||||||||||||||||||||||| ||||| ||||||| |||||    
T  22371008 aatgaggggtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttc 22371071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 10543647 - 10543712
Alignment:
Q  171 aaaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||| |||| |||||||| |||||    
T  10543647 aaaataaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttc 10543712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 24200805 - 24200746
Alignment:
Q  177 aggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||| || ||||||||||||||||||||||| |||| || ||||| |||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttc 24200746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 44604825 - 44604868
Alignment:
Q  193 taactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  44604825 taactgctaaagttgttgtcatgtgactggaaggtcacaggttc 44604868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 17667974 - 17668016
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  17667974 aactggtaaagttgttgtcatgtgactggaaggtcacgggttc 17668016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 25249920 - 25249858
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||| |||||||||||| | || |||||||||||||||||||| |||| |||||||| |||||    
T  25249920 atgatgggtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttc 25249858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 39189603 - 39189557
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactg 221  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||    
T  39189603 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 39189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 14544018 - 14544075
Alignment:
Q  177 aggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggt 234  Q
    |||||||||||||| | || |||||||||||||||||||| |||| ||||| ||||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggt 14544075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 9671134 - 9671182
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaa 224  Q
    ||||||||||||||| | ||| ||||||||||||||||||| |||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaa 9671182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 27573581 - 27573628
Alignment:
Q  182 taaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    ||||||||| | ||||||||||||||||||||||| |||| |||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 27573628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 40417031 - 40416992
Alignment:
Q  197 tggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttc 40416992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 17623536 - 17623578
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||||||  ||||||||||||| |||||    
T  17623536 aactggtaaagttgttgtcatgcgactggaaggtcacgggttc 17623578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 19977893 - 19977835
Alignment:
Q  178 ggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||| | ||||||| ||||||||||||||| || | |||||||| |||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttc 19977835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 230
Target Start/End: Complemental strand, 39914467 - 39914433
Alignment:
Q  196 ctggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||||||||| |||||||||||||    
T  39914467 ctggtaaagttgttgtcatgtgactggaaggtcac 39914433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 7214488 - 7214541
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||| ||||   ||||||||||||||||||||||| |||| |||||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgtgactgaaaggtca 7214541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 17896215 - 17896267
Alignment:
Q  178 ggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||  | ||||||||||||||||||||||| || | ||||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcac 17896267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 13730785 - 13730725
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 13730725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 52926391 - 52926331
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 52926331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 8247872 - 8247810
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  8247872 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 8247810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 40272994 - 40272940
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  40272994 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtca 40272940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 4495850 - 4495785
Alignment:
Q  171 aaaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||| ||||||||||||| | | ||||||||||||||||||||||| ||||||||||||| |||||    
T  4495850 aaaaggaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 4495785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 10870132 - 10870072
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 10870072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 25517353 - 25517297
Alignment:
Q  177 aggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacagg 233  Q
    |||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacagg 25517297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 29366902 - 29366843
Alignment:
Q  177 aggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||| ||||||||||||||||||||||||| |||  |||||||| |||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttc 29366843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 1217064 - 1217126
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | ||||||||||||||| ||||||| |||| |||||||| |||||    
T  1217064 atgaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttc 1217126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 7697067 - 7697006
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||  |||||||| |||||    
T  7697067 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttc 7697006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 16735416 - 16735477
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||| || ||||| |||||    
T  16735416 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttc 16735477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 39203491 - 39203552
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||   |||| |||||||||||||||||| |||| ||||||||||||||    
T  39203491 tgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttc 39203552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 46421218 - 46421158
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||  |||||||| |||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttc 46421158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 9607178 - 9607232
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||||||||||||| | |||| |||||||||||||||||| |||| |||||||    
T  9607178 tgaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtca 9607232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 26869701 - 26869743
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  26869701 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttc 26869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 6412002 - 6411957
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactg 221  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtaactg 6411957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 12914216 - 12914156
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | |||||||||||||||||| |||| || | ||||||||| ||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttc 12914156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 13628976 - 13628913
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaa-gttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||   |||||||||| ||||||||||||| |||| |||||||| |||||    
T  13628976 atgaggggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttc 13628913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 5173903 - 5173841
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaa-gttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | |||| ||||| ||||||||||||| |||| |||||||| |||||    
T  5173903 tgaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttc 5173841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 9276248 - 9276289
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatg 215  Q
    ||||||||||||||||| | |||| |||||||||||||||||    
T  9276248 atgaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 22609742 - 22609802
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||| ||||||||||||||||||| |||| ||||| || |||||    
T  22609742 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttc 22609802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 30533 - 30593
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttc 30593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 1346918 - 1346978
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 1346978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 1354936 - 1354876
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttc 1354876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 1941809 - 1941861
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtc 228  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgactggaaggtc 1941861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 14975267 - 14975207
Alignment:
Q  170 aaaaatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||| ||||||||| | ||| ||||||||||||||||||| |||||||||||||    
T  14975267 aaaaatgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcac 14975207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 8409195 - 8409251
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||||| | |||||||||||||||||| |||| |||| ||||||||    
T  8409195 atgaggggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcac 8409251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 9161074 - 9161137
Alignment:
Q  173 aatgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||||  | ||  ||||||||||||||||||| |||| ||||||||||||||    
T  9161074 aatgaggggtaaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttc 9161137  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 3815256 - 3815198
Alignment:
Q  178 ggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||| | ||||||||||||||||||||||| |||| || ||||| |||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttc 3815198  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 32728334 - 32728281
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacag 232  Q
    |||||||||||||| |||  |||||||||||||||||| |||| ||||||||||    
T  32728334 gggtaaccttggtggaacgagtaaagttgttgtcatgtgactgaaaggtcacag 32728281  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 20400625 - 20400681
Alignment:
Q  180 ggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||| | || ||||| |||||||||||||| |||| ||||||||||||||    
T  20400625 ggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttc 20400681  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 33923009 - 33922949
Alignment:
Q  176 gaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||| | ||| ||||||||||||||||| | |||| || |||||||||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttc 33922949  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 12222080 - 12222038
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||||||| |||| |||||||| |||||    
T  12222080 aactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 12222038  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 12063424 - 12063481
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||| ||||| |||||||||| |||||  |||| |||||||| |||||    
T  12063424 gggtaaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttc 12063481  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 14553477 - 14553525
Alignment:
Q  187 ttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||| ||||||||||||||||||||||| |||  ||||||||||||||    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttc 14553525  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 24734591 - 24734640
Alignment:
Q  180 ggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    |||||| |||| | ||||||||||||||||||||||| |||| |||||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 24734640  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 6024205 - 6024241
Alignment:
Q  194 aactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    ||||||||||||||||||||||| | |||||||||||    
T  6024205 aactggtaaagttgttgtcatgtgattggaaggtcac 6024241  T

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Target: scaffold0311 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 10773 - 10824
Alignment:
Q  185 ccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttc 10824  T

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Target: scaffold0057 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 24950 - 24895
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtca 229  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||    
T  24950 atgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 24895  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 83827 - 83889
Alignment:
Q  174 atgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||| | |||| |||||||||||||||||| |||| |||||||| |||||    
T  83827 atgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttc 83889  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 226588 - 226533
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcac 230  Q
    |||| ||||||||||| | ||||||||||||||||||||||| |||| ||||||||    
T  226588 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcac 226533  T

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Target: scaffold0258 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 13202 - 13144
Alignment:
Q  178 ggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||| | ||| ||||||||||||||||||| |||| |||||||| |||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttc 13144  T

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Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 8898 - 8959
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||| ||| ||||||||||||||| |||| || |||||||||||    
T  8898 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttc 8959  T

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Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 10226 - 10169
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||  | ||||||||||||||||||||||| |||| |||||||| |||||    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 10169  T

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Target: scaffold0187; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 19226 - 19287
Alignment:
Q  175 tgaggggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||||||| | ||| ||| ||||||||||||||| |||| || |||||||||||    
T  19226 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttc 19287  T

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Target: scaffold0187; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 20554 - 20497
Alignment:
Q  179 gggtaaccttggtgtaactggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    |||||||||||  | ||||||||||||||||||||||| |||| |||||||| |||||    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttc 20497  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 8865 - 8905
Alignment:
Q  196 ctggtaaagttgttgtcatgtaactggaaggtcacaggttc 236  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcacaggttc 8905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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