View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18661_high_13 (Length: 327)
Name: NF18661_high_13
Description: NF18661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18661_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 9 - 309
Target Start/End: Complemental strand, 34768622 - 34768322
Alignment:
| Q |
9 |
gcaatagaagaattttttccttataagttctaagtgtattccttcgccactaaccttacattgtatcgatcaagaatgacatcttattgactttgaatgt |
108 |
Q |
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| T |
34768622 |
gcaatagaagaattttttccttataagttctaagtgtattccttcgccactaaccttacattgtatcgatcaagaatgacatcttattgactttgaatgt |
34768523 |
T |
|
| Q |
109 |
gtagatccactcaactaataggttttaatgcccctagcctctcaaaaatctccaagtttcattcttttttcaagtgctcttgtctcatcatctatagcat |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
34768522 |
gtagatccactcaactaataggttttaatgcccctagcctctcaaaaatctccaagttccattcttttttcaagtgctcttgtctcatcatctatagcat |
34768423 |
T |
|
| Q |
209 |
tttttagtggaaaacaatgtccatatctttaacttggactcaatatatattctcgagtaagctaagtattcaacatatattgaaattttcactgagtcaa |
308 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34768422 |
tttttagtgggaaacaatgtccatatctttaacttggactcaatatatattctcgagtaagctaagtattcaacatatattgaaattttcactgagtcaa |
34768323 |
T |
|
| Q |
309 |
t |
309 |
Q |
| |
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| T |
34768322 |
t |
34768322 |
T |
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