View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18661_low_14 (Length: 304)

Name: NF18661_low_14
Description: NF18661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18661_low_14
NF18661_low_14
[»] chr7 (64 HSPs)
chr7 (1-142)||(11373475-11373616)
chr7 (1-142)||(41506112-41506253)
chr7 (10-142)||(21350681-21350814)
chr7 (9-142)||(34947441-34947574)
chr7 (1-142)||(37245631-37245772)
chr7 (3-142)||(759140-759279)
chr7 (9-142)||(28202364-28202497)
chr7 (9-141)||(2459413-2459545)
chr7 (1-142)||(83325-83467)
chr7 (9-142)||(23670426-23670560)
chr7 (1-138)||(24516336-24516473)
chr7 (9-142)||(21390235-21390369)
chr7 (1-139)||(34100594-34100732)
chr7 (9-139)||(3178259-3178391)
chr7 (1-142)||(8592487-8592628)
chr7 (26-142)||(19271805-19271920)
chr7 (4-142)||(25571361-25571498)
chr7 (9-142)||(28103671-28103807)
chr7 (2-91)||(46478341-46478430)
chr7 (1-142)||(21760031-21760172)
chr7 (1-141)||(7457468-7457607)
chr7 (9-142)||(42935599-42935735)
chr7 (9-142)||(43873864-43873997)
chr7 (12-142)||(48608808-48608937)
chr7 (1-142)||(40076259-40076397)
chr7 (9-142)||(9785929-9786062)
chr7 (29-142)||(47045546-47045653)
chr7 (14-142)||(36790679-36790809)
chr7 (1-87)||(38391744-38391830)
chr7 (10-87)||(6494990-6495067)
chr7 (1-142)||(7463153-7463295)
chr7 (27-87)||(49101659-49101719)
chr7 (1-142)||(27920927-27921070)
chr7 (26-142)||(32346124-32346240)
chr7 (26-81)||(31930569-31930626)
chr7 (1-141)||(33819154-33819296)
chr7 (1-78)||(42796010-42796090)
chr7 (10-139)||(24166934-24167064)
chr7 (1-91)||(22738693-22738783)
chr7 (9-91)||(26974018-26974100)
chr7 (25-75)||(35333051-35333101)
chr7 (12-84)||(30546413-30546485)
chr7 (9-77)||(30865973-30866041)
chr7 (1-91)||(5524369-5524462)
chr7 (26-77)||(13961965-13962016)
chr7 (26-142)||(44424086-44424201)
chr7 (28-90)||(4958674-4958736)
chr7 (9-91)||(32018971-32019053)
chr7 (3-63)||(16560619-16560679)
chr7 (3-63)||(16604983-16605043)
chr7 (27-91)||(16904371-16904435)
chr7 (228-292)||(29780352-29780416)
chr7 (34-90)||(37850807-37850863)
chr7 (51-86)||(29198777-29198812)
chr7 (1-91)||(29835461-29835550)
chr7 (36-139)||(37490319-37490422)
chr7 (26-77)||(17828423-17828473)
chr7 (9-137)||(21937842-21937970)
chr7 (226-289)||(28909923-28909986)
chr7 (9-91)||(32018767-32018849)
chr7 (27-72)||(17610913-17610958)
chr7 (26-79)||(31665789-31665842)
chr7 (36-89)||(37490457-37490510)
chr7 (10-86)||(46602047-46602123)
[»] chr1 (70 HSPs)
chr1 (9-142)||(35367736-35367869)
chr1 (1-142)||(39864045-39864186)
chr1 (28-142)||(6785190-6785304)
chr1 (1-142)||(12039016-12039157)
chr1 (1-142)||(20209883-20210024)
chr1 (10-190)||(24991705-24991886)
chr1 (1-142)||(49224029-49224170)
chr1 (1-142)||(14757637-14757777)
chr1 (9-142)||(37506058-37506191)
chr1 (1-142)||(23169036-23169175)
chr1 (9-141)||(40144898-40145030)
chr1 (1-87)||(36701910-36701996)
chr1 (1-87)||(36718014-36718100)
chr1 (9-139)||(13579672-13579801)
chr1 (9-141)||(7759150-7759282)
chr1 (9-91)||(9307612-9307694)
chr1 (1-141)||(28748926-28749066)
chr1 (9-83)||(15699115-15699189)
chr1 (1-87)||(37276450-37276536)
chr1 (2-91)||(6023693-6023782)
chr1 (9-90)||(22856288-22856369)
chr1 (1-115)||(44707803-44707917)
chr1 (1-142)||(16395090-16395229)
chr1 (1-142)||(33733305-33733446)
chr1 (9-139)||(52429279-52429411)
chr1 (26-139)||(3260529-3260641)
chr1 (10-84)||(25089137-25089212)
chr1 (25-139)||(2572405-2572520)
chr1 (23-142)||(4659711-4659829)
chr1 (29-91)||(37539112-37539174)
chr1 (43-142)||(35682879-35682977)
chr1 (1-77)||(10495838-10495913)
chr1 (29-142)||(26256159-26256272)
chr1 (26-142)||(26093328-26093444)
chr1 (27-139)||(27721470-27721581)
chr1 (1-136)||(32826034-32826171)
chr1 (26-139)||(9379169-9379282)
chr1 (26-87)||(38787330-38787391)
chr1 (26-86)||(8896400-8896460)
chr1 (26-141)||(39887769-39887885)
chr1 (9-87)||(34031578-34031656)
chr1 (10-87)||(30754993-30755070)
chr1 (9-139)||(45331276-45331408)
chr1 (11-87)||(4441656-4441732)
chr1 (1-142)||(31042731-31042872)
chr1 (26-90)||(37177822-37177886)
chr1 (9-87)||(917013-917091)
chr1 (27-85)||(5179468-5179526)
chr1 (1-91)||(29778439-29778529)
chr1 (26-141)||(31978720-31978832)
chr1 (9-87)||(44761582-44761660)
chr1 (10-87)||(7351625-7351702)
chr1 (10-142)||(41121877-41122007)
chr1 (9-75)||(24880874-24880943)
chr1 (26-89)||(27896942-27897005)
chr1 (1-87)||(6160502-6160588)
chr1 (1-87)||(21910049-21910133)
chr1 (26-84)||(31154120-31154178)
chr1 (69-139)||(3312056-3312126)
chr1 (26-87)||(11449875-11449935)
chr1 (36-142)||(17988823-17988929)
chr1 (26-74)||(32219729-32219777)
chr1 (9-77)||(42409993-42410061)
chr1 (26-77)||(2137437-2137488)
chr1 (28-138)||(9412873-9412982)
chr1 (26-76)||(15904751-15904801)
chr1 (9-50)||(45615557-45615598)
chr1 (26-87)||(52837269-52837330)
chr1 (38-90)||(24500058-24500110)
chr1 (47-87)||(35538644-35538684)
[»] chr2 (53 HSPs)
chr2 (26-142)||(35313821-35313937)
chr2 (26-142)||(3323335-3323451)
chr2 (9-142)||(5789694-5789826)
chr2 (26-142)||(34120500-34120616)
chr2 (1-141)||(8947090-8947232)
chr2 (9-142)||(14523418-14523551)
chr2 (1-142)||(16463621-16463764)
chr2 (26-142)||(36354506-36354621)
chr2 (9-139)||(43410363-43410493)
chr2 (16-142)||(9458319-9458444)
chr2 (26-127)||(35242360-35242461)
chr2 (1-142)||(36794218-36794359)
chr2 (9-142)||(39785519-39785652)
chr2 (9-142)||(37322363-37322495)
chr2 (9-142)||(25637414-25637548)
chr2 (10-139)||(34225527-34225656)
chr2 (9-142)||(15359133-15359268)
chr2 (9-142)||(45235513-45235648)
chr2 (26-142)||(17695262-17695380)
chr2 (28-139)||(5272204-5272314)
chr2 (10-83)||(11742575-11742648)
chr2 (34-142)||(7494909-7495018)
chr2 (26-141)||(26863421-26863539)
chr2 (26-90)||(16377719-16377787)
chr2 (26-77)||(17346425-17346476)
chr2 (9-87)||(39691479-39691557)
chr2 (26-87)||(19937374-19937435)
chr2 (9-78)||(31448739-31448808)
chr2 (9-77)||(32831221-32831289)
chr2 (9-77)||(39329710-39329777)
chr2 (28-91)||(7438917-7438980)
chr2 (24-87)||(17122973-17123036)
chr2 (26-142)||(28186148-28186264)
chr2 (2-129)||(43115841-43115968)
chr2 (1-78)||(16805879-16805956)
chr2 (1-78)||(16845160-16845237)
chr2 (25-139)||(19444083-19444197)
chr2 (26-90)||(28170646-28170710)
chr2 (226-292)||(25441587-25441653)
chr2 (47-87)||(1206775-1206815)
chr2 (29-77)||(18202104-18202152)
chr2 (26-78)||(18853264-18853316)
chr2 (1-57)||(19426474-19426530)
chr2 (41-89)||(45464009-45464057)
chr2 (99-142)||(34120657-34120700)
chr2 (39-90)||(43699672-43699723)
chr2 (26-89)||(43730603-43730665)
chr2 (100-138)||(8928547-8928585)
chr2 (9-87)||(26608189-26608267)
chr2 (51-89)||(36173425-36173463)
chr2 (28-142)||(34451400-34451511)
chr2 (26-75)||(41221009-41221058)
chr2 (226-282)||(30166236-30166292)
[»] chr4 (81 HSPs)
chr4 (1-142)||(35380379-35380521)
chr4 (1-142)||(47773065-47773206)
chr4 (1-91)||(17237342-17237432)
chr4 (1-142)||(11907645-11907786)
chr4 (26-142)||(51624720-51624836)
chr4 (1-142)||(22129976-22130118)
chr4 (1-139)||(34360592-34360730)
chr4 (1-142)||(49175980-49176122)
chr4 (1-190)||(6643706-6643894)
chr4 (1-141)||(49746895-49747036)
chr4 (9-89)||(53346746-53346826)
chr4 (9-142)||(35311277-35311412)
chr4 (10-142)||(49428397-49428528)
chr4 (1-139)||(40122900-40123039)
chr4 (1-139)||(47464411-47464550)
chr4 (9-142)||(5841481-5841615)
chr4 (9-142)||(38405156-38405290)
chr4 (1-142)||(52859845-52859981)
chr4 (26-142)||(42616974-42617090)
chr4 (9-87)||(33790785-33790863)
chr4 (1-142)||(21240750-21240887)
chr4 (1-90)||(43237229-43237318)
chr4 (10-139)||(44536251-44536381)
chr4 (1-91)||(32884786-32884876)
chr4 (1-142)||(7061710-7061851)
chr4 (1-142)||(26147661-26147805)
chr4 (10-142)||(2066725-2066855)
chr4 (24-87)||(54506777-54506840)
chr4 (1-87)||(6609750-6609836)
chr4 (1-139)||(16821377-16821516)
chr4 (1-77)||(17114439-17114515)
chr4 (1-142)||(25233116-25233256)
chr4 (10-139)||(52247483-52247611)
chr4 (26-89)||(18741545-18741608)
chr4 (1-139)||(2942691-2942831)
chr4 (48-139)||(28911249-28911340)
chr4 (1-91)||(36985771-36985861)
chr4 (1-139)||(2653357-2653495)
chr4 (1-90)||(53412094-53412183)
chr4 (1-87)||(3689551-3689637)
chr4 (47-142)||(4972507-4972601)
chr4 (26-142)||(10754308-10754423)
chr4 (26-142)||(10968077-10968192)
chr4 (1-91)||(38663493-38663583)
chr4 (1-90)||(35998798-35998886)
chr4 (4-77)||(44526378-44526451)
chr4 (48-142)||(28500976-28501072)
chr4 (25-88)||(7986962-7987025)
chr4 (26-77)||(11288700-11288751)
chr4 (28-87)||(31370373-31370432)
chr4 (26-138)||(19265744-19265858)
chr4 (10-84)||(20612226-20612300)
chr4 (242-292)||(22866991-22867041)
chr4 (1-83)||(38502528-38502610)
chr4 (9-87)||(50264134-50264212)
chr4 (26-91)||(47359020-47359085)
chr4 (12-142)||(49579235-49579363)
chr4 (26-86)||(10672643-10672703)
chr4 (26-86)||(10886283-10886343)
chr4 (26-90)||(43902237-43902301)
chr4 (10-77)||(2400777-2400844)
chr4 (47-139)||(46396963-46397055)
chr4 (26-85)||(48914219-48914278)
chr4 (10-87)||(461947-462024)
chr4 (10-81)||(23915485-23915555)
chr4 (52-139)||(29295163-29295254)
chr4 (26-87)||(30682267-30682328)
chr4 (31-76)||(43967611-43967656)
chr4 (99-139)||(21698653-21698693)
chr4 (26-78)||(25142450-25142502)
chr4 (39-87)||(35251888-35251936)
chr4 (3-54)||(16506281-16506332)
chr4 (24-91)||(41711525-41711592)
chr4 (9-87)||(42517692-42517773)
chr4 (26-85)||(54202187-54202246)
chr4 (26-84)||(30260996-30261054)
chr4 (9-87)||(39397333-39397411)
chr4 (112-142)||(54921772-54921802)
chr4 (50-86)||(10699504-10699540)
chr4 (50-86)||(10913274-10913310)
chr4 (99-139)||(20681406-20681446)
[»] chr3 (68 HSPs)
chr3 (1-142)||(43253903-43254045)
chr3 (1-142)||(44301495-44301637)
chr3 (25-142)||(10366713-10366830)
chr3 (1-142)||(36460456-36460597)
chr3 (9-142)||(36476518-36476651)
chr3 (1-139)||(37311886-37312025)
chr3 (9-131)||(37695714-37695837)
chr3 (3-138)||(39043799-39043932)
chr3 (1-142)||(30190700-30190841)
chr3 (1-142)||(19822945-19823086)
chr3 (1-142)||(37497425-37497567)
chr3 (26-141)||(38137511-38137626)
chr3 (1-90)||(11632067-11632156)
chr3 (9-90)||(30711059-30711140)
chr3 (26-91)||(12904849-12904914)
chr3 (1-142)||(38795278-38795419)
chr3 (9-142)||(54726419-54726552)
chr3 (9-142)||(37773012-37773147)
chr3 (1-87)||(3313243-3313329)
chr3 (1-87)||(29024006-29024091)
chr3 (13-78)||(23004434-23004499)
chr3 (10-142)||(33491408-33491542)
chr3 (9-78)||(45710848-45710917)
chr3 (9-142)||(51838007-51838141)
chr3 (9-142)||(3901197-3901330)
chr3 (1-77)||(11905821-11905897)
chr3 (9-142)||(27471269-27471402)
chr3 (8-87)||(1778632-1778710)
chr3 (10-77)||(19611908-19611975)
chr3 (1-91)||(8679094-8679184)
chr3 (1-90)||(12736612-12736701)
chr3 (12-142)||(17652687-17652816)
chr3 (26-83)||(38705168-38705225)
chr3 (1-89)||(34750483-34750571)
chr3 (26-89)||(49447856-49447919)
chr3 (9-87)||(5322985-5323063)
chr3 (9-139)||(27549333-27549464)
chr3 (10-75)||(24569149-24569214)
chr3 (48-142)||(31158598-31158691)
chr3 (9-142)||(53560150-53560284)
chr3 (26-139)||(41038458-41038571)
chr3 (26-138)||(23068137-23068248)
chr3 (26-142)||(34957438-34957553)
chr3 (26-87)||(19609288-19609349)
chr3 (9-86)||(28690830-28690907)
chr3 (1-78)||(52290891-52290968)
chr3 (29-142)||(40462255-40462366)
chr3 (26-77)||(41351629-41351680)
chr3 (1-87)||(14194545-14194630)
chr3 (26-83)||(30682131-30682188)
chr3 (26-91)||(40194488-40194553)
chr3 (26-71)||(43719272-43719317)
chr3 (39-88)||(50036510-50036559)
chr3 (46-139)||(24703599-24703692)
chr3 (9-77)||(36462994-36463062)
chr3 (26-90)||(38512011-38512075)
chr3 (24-91)||(1018922-1018989)
chr3 (253-292)||(3985645-3985684)
chr3 (99-142)||(30710583-30710626)
chr3 (13-72)||(37804839-37804898)
chr3 (225-292)||(41380614-41380681)
chr3 (103-142)||(45710783-45710822)
chr3 (226-292)||(14170146-14170212)
chr3 (111-141)||(24569246-24569276)
chr3 (26-77)||(26467108-26467161)
chr3 (25-89)||(24245157-24245221)
chr3 (26-70)||(48541065-48541109)
chr3 (26-66)||(54477524-54477564)
[»] chr8 (58 HSPs)
chr8 (1-142)||(44761535-44761674)
chr8 (9-142)||(9300162-9300297)
chr8 (1-142)||(13335151-13335291)
chr8 (1-142)||(39482546-39482690)
chr8 (9-142)||(22771884-22772017)
chr8 (9-190)||(21216150-21216330)
chr8 (1-139)||(10179988-10180126)
chr8 (1-142)||(34948728-34948867)
chr8 (1-141)||(45425707-45425848)
chr8 (9-142)||(4428400-4428531)
chr8 (10-138)||(17719308-17719436)
chr8 (1-142)||(17823856-17823996)
chr8 (4-139)||(11976980-11977115)
chr8 (9-139)||(31231667-31231797)
chr8 (1-86)||(42886990-42887075)
chr8 (9-142)||(5053202-5053334)
chr8 (4-87)||(32678392-32678475)
chr8 (9-142)||(10953787-10953914)
chr8 (9-142)||(10961792-10961919)
chr8 (26-141)||(29226594-29226708)
chr8 (9-139)||(14854983-14855115)
chr8 (26-142)||(26626178-26626294)
chr8 (27-90)||(36006954-36007017)
chr8 (1-91)||(7172899-7172989)
chr8 (10-87)||(31082608-31082685)
chr8 (9-77)||(10098040-10098108)
chr8 (9-85)||(32476278-32476354)
chr8 (1-139)||(34393995-34394137)
chr8 (1-141)||(39405697-39405837)
chr8 (1-139)||(396652-396790)
chr8 (9-78)||(40996414-40996483)
chr8 (52-137)||(1875831-1875916)
chr8 (27-87)||(35732110-35732170)
chr8 (26-142)||(39301022-39301138)
chr8 (26-84)||(31271013-31271071)
chr8 (26-90)||(1739529-1739593)
chr8 (26-90)||(35504937-35505001)
chr8 (26-77)||(27294125-27294176)
chr8 (1-142)||(39466078-39466219)
chr8 (24-89)||(43719300-43719365)
chr8 (1-138)||(2767332-2767475)
chr8 (1-90)||(4924108-4924197)
chr8 (26-79)||(5356597-5356650)
chr8 (1-53)||(1875633-1875685)
chr8 (221-292)||(3184050-3184121)
chr8 (26-77)||(12559562-12559613)
chr8 (10-65)||(31331419-31331474)
chr8 (36-87)||(40028501-40028552)
chr8 (242-292)||(22277431-22277481)
chr8 (100-142)||(40996501-40996543)
chr8 (25-54)||(6796394-6796423)
chr8 (109-142)||(32476222-32476255)
chr8 (11-79)||(42972559-42972630)
chr8 (9-53)||(135716-135760)
chr8 (99-139)||(15675373-15675413)
chr8 (33-73)||(34057691-34057731)
chr8 (61-142)||(40109647-40109727)
chr8 (26-90)||(41091981-41092044)
[»] chr6 (46 HSPs)
chr6 (1-142)||(181491-181631)
chr6 (9-142)||(11655993-11656127)
chr6 (1-142)||(30716833-30716975)
chr6 (1-142)||(31894249-31894387)
chr6 (9-142)||(6801864-6801998)
chr6 (3-142)||(29363238-29363379)
chr6 (9-142)||(23142602-23142734)
chr6 (26-142)||(34657626-34657745)
chr6 (26-142)||(3720305-3720421)
chr6 (1-87)||(13909413-13909499)
chr6 (9-91)||(24983496-24983578)
chr6 (9-139)||(15058055-15058184)
chr6 (1-142)||(1781739-1781877)
chr6 (1-142)||(21010105-21010252)
chr6 (26-142)||(5302285-5302401)
chr6 (1-85)||(3291807-3291891)
chr6 (1-142)||(11143626-11143766)
chr6 (9-87)||(13087519-13087597)
chr6 (28-89)||(15046111-15046171)
chr6 (1-142)||(32440684-32440827)
chr6 (26-142)||(7920175-7920289)
chr6 (10-89)||(10923426-10923505)
chr6 (9-84)||(17828932-17829007)
chr6 (40-141)||(21425635-21425738)
chr6 (26-77)||(22398412-22398463)
chr6 (1-139)||(34299931-34300070)
chr6 (33-139)||(15582222-15582326)
chr6 (30-86)||(1063671-1063727)
chr6 (26-78)||(16205222-16205274)
chr6 (26-89)||(7071997-7072060)
chr6 (99-142)||(21478232-21478275)
chr6 (61-142)||(27367524-27367607)
chr6 (61-142)||(27457871-27457954)
chr6 (26-87)||(4367317-4367378)
chr6 (26-87)||(33510129-33510190)
chr6 (1-133)||(1956018-1956150)
chr6 (99-142)||(27367236-27367279)
chr6 (99-142)||(27457583-27457626)
chr6 (225-292)||(30539125-30539192)
chr6 (226-292)||(12134630-12134696)
chr6 (26-84)||(13206896-13206954)
chr6 (10-83)||(21425397-21425470)
chr6 (99-141)||(23397754-23397796)
chr6 (46-141)||(28106013-28106105)
chr6 (9-77)||(6834416-6834484)
chr6 (228-292)||(22911321-22911385)
[»] chr5 (49 HSPs)
chr5 (9-142)||(6315823-6315956)
chr5 (1-141)||(40530262-40530403)
chr5 (1-142)||(40899852-40899993)
chr5 (1-141)||(6753696-6753836)
chr5 (9-142)||(41496014-41496147)
chr5 (9-140)||(19929882-19930013)
chr5 (1-142)||(4818484-4818626)
chr5 (9-142)||(8698242-8698376)
chr5 (9-142)||(6753963-6754096)
chr5 (1-142)||(42803658-42803799)
chr5 (1-142)||(6615918-6616059)
chr5 (9-142)||(27542729-27542862)
chr5 (10-142)||(15818529-15818661)
chr5 (9-142)||(1248650-1248783)
chr5 (10-90)||(29570378-29570458)
chr5 (26-141)||(31654987-31655103)
chr5 (1-139)||(7827964-7828102)
chr5 (9-87)||(8725055-8725133)
chr5 (35-141)||(9515668-9515777)
chr5 (25-91)||(11796229-11796295)
chr5 (9-90)||(29374328-29374409)
chr5 (1-138)||(21060569-21060705)
chr5 (10-90)||(22848431-22848511)
chr5 (9-142)||(27580540-27580667)
chr5 (26-89)||(4441008-4441071)
chr5 (1-142)||(41062198-41062338)
chr5 (10-142)||(3348177-3348309)
chr5 (39-89)||(2232145-2232195)
chr5 (1-88)||(41492290-41492377)
chr5 (9-88)||(41478815-41478894)
chr5 (13-142)||(2588111-2588242)
chr5 (32-87)||(37101274-37101329)
chr5 (1-87)||(15439357-15439442)
chr5 (9-66)||(38161458-38161515)
chr5 (36-77)||(39325862-39325903)
chr5 (26-57)||(29856066-29856097)
chr5 (29-91)||(11904190-11904252)
chr5 (27-77)||(26285542-26285592)
chr5 (99-141)||(29374128-29374170)
chr5 (226-292)||(37995781-37995847)
chr5 (48-90)||(41480137-41480179)
chr5 (46-91)||(32439857-32439902)
chr5 (48-89)||(41478772-41478813)
chr5 (46-78)||(3076622-3076654)
chr5 (9-77)||(18841478-18841546)
chr5 (34-78)||(30512757-30512801)
chr5 (34-78)||(30553097-30553141)
chr5 (9-77)||(37184125-37184193)
chr5 (48-88)||(41480181-41480221)
[»] scaffold0159 (1 HSPs)
scaffold0159 (9-142)||(34067-34199)
[»] scaffold1809 (1 HSPs)
scaffold1809 (9-142)||(732-864)
[»] scaffold0328 (1 HSPs)
scaffold0328 (10-142)||(8030-8163)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-142)||(252848-252984)
[»] scaffold0018 (1 HSPs)
scaffold0018 (9-89)||(136085-136165)
[»] scaffold0110 (2 HSPs)
scaffold0110 (1-87)||(1693-1779)
scaffold0110 (99-139)||(1493-1533)
[»] scaffold0012 (1 HSPs)
scaffold0012 (11-87)||(105673-105749)
[»] scaffold0095 (2 HSPs)
scaffold0095 (1-141)||(50139-50279)
scaffold0095 (1-142)||(22282-22423)
[»] scaffold0182 (1 HSPs)
scaffold0182 (1-87)||(20393-20479)
[»] scaffold0016 (1 HSPs)
scaffold0016 (40-139)||(76229-76328)
[»] scaffold0330 (1 HSPs)
scaffold0330 (9-77)||(5389-5457)
[»] scaffold0011 (1 HSPs)
scaffold0011 (26-90)||(14233-14297)
[»] scaffold0583 (1 HSPs)
scaffold0583 (9-87)||(2014-2092)
[»] scaffold0302 (1 HSPs)
scaffold0302 (9-78)||(16096-16165)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-91)||(17020-17110)
[»] scaffold0068 (1 HSPs)
scaffold0068 (29-73)||(56664-56708)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11373475 - 11373616
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       ||    
T  11373475 attagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatagtgggaaaaaata 11373574  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  ||||||| ||||||||||| ||||||||||||||    
T  11373575 ataaatgctgcattgatattgtaaagtaacaattattttgag 11373616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41506112 - 41506253
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||        ||    
T  41506112 attagtagcatttactaaaacactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatattgaaaaaaatta 41506211  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  41506212 ataaatattgcattgatattgtaaagtgataattattttgag 41506253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 21350681 - 21350814
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaatat 108  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||        ||||||||      
T  21350681 atttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgc 21350780  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||||||||||||||||||||||||||    
T  21350781 tgcattggtattgtaaagtgacaattattttgag 21350814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 34947574 - 34947441
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||       |||||||| |    
T  34947574 catttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataataatggaaaaaaataataaatgt 34947475  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  34947474 tgcattggtattctaaagtgacaattattttgag 34947441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 37245772 - 37245631
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| |  |||||||||||| | |||||||| |||||||| |||||||||||||||||||| |||||||||||        ||    
T  37245772 attagtagcatttactaaaacactcttattaattgtaataagtggagtggttaagttggatgaaattcaataaataagggtataatagtgagaaaaaata 37245673  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  37245672 ataaatgttgcattggtattgtaaagtgacaattattttgag 37245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 759140 - 759279
Alignment:
Q  3 tagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaat 102  Q
    ||||| |||||||||||||  | ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||       ||||    
T  759140 tagtatcatttactaaaacatccttattaattgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatggaaaaaaataat 759239  T
Q  103 aaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||  |||||||||||| |||||||||||||||||||||    
T  759240 aaatgctgcattggtattctaaagtgacaattattttgag 759279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 28202364 - 28202497
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||||||||||  | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||       ||||||||      
T  28202364 catttactaaaacatccttattaattgtagttagtggagtagtaaagttggatgaaattcaataaataagagtataataatggaaaaaaataataaatgc 28202463  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    || ||||||||| |||||||||||||||||||||    
T  28202464 tgtattggtattctaaagtgacaattattttgag 28202497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 2459545 - 2459413
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||        ||||||||      
T  2459545 catttactacaacacccttattaattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtataatagtgaaaaaaaataataaatgc 2459446  T
Q  109 tgcattggtattgtaaagtgacaattattttga 141  Q
    |||||||||||||||||||| ||||||||||||    
T  2459445 tgcattggtattgtaaagtgtcaattattttga 2459413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 83467 - 83325
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| |||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||        |    
T  83467 attagtatcatttactaaaacattcttattaattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatggaaaaaaaat 83368  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||  |||||||||||| |||||||||||||||||||||    
T  83367 aataaatgctgcattggtattctaaagtgacaattattttgag 83325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 23670560 - 23670426
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatag-tggnnnnnnntaataaata 107  Q
    ||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||       ||||||||     
T  23670560 catttactaaaacactcttattaatggtagttagtggagtagttaagtttgatgaaatttaataaataagagtataatagcggggggaaaataataaatg 23670461  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
     |||||| |||||||||||||||||||||||||||    
T  23670460 atgcattagtattgtaaagtgacaattattttgag 23670426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24516336 - 24516473
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||||||||   || ||||||||       ||    
T  24516336 attagtaacatttactaaaaaaaccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaagataaaatagtgggaaaagata 24516435  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattt 138  Q
    |||||| |||||||| ||||||||| ||||||||||||    
T  24516436 ataaatgttgcattgatattgtaaaatgacaattattt 24516473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 21390369 - 21390235
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaata 107  Q
    |||||||||||||  | ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||        |||||||      
T  21390369 catttactaaaacatccttattgattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaacg 21390270  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||||| |||||||||||||||||||||    
T  21390269 ttgcattggtattataaagtgacaattattttgag 21390235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 34100594 - 34100732
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||   | |||||||||||||||| || |||||||||||| ||||| |||||||||||||| |||||||||||        ||    
T  34100594 attagtagcatttactaaaatatctttattaattgtagttactgaagtagttaagttggatgacattcaataaataagggtataatagtgaaaaaacata 34100693  T
Q  101 ataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  34100694 ataaatgttgcattagtattgtaaagtgacaattatttt 34100732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 3178259 - 3178391
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaata- 107  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |||       |||||||||     
T  3178259 catttactaaaacacctttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtatattaatgggaaaacataataaatat 3178358  T
Q  108 -ttgcattggtattgtaaagtgacaattatttt 139  Q
     ||||||| ||||| |||||| |||||||||||    
T  3178359 gttgcattagtattctaaagtaacaattatttt 3178391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8592487 - 8592628
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||  ||||| |||||| || |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |       ||    
T  8592487 attagtagtatttaataaaacacccttattaattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataatagtaggaaaaaata 8592586  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  ||||||| ||||||||| ||| ||||||||||||    
T  8592587 ataaatgctgcattgatattgtaaaatgaaaattattttgag 8592628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 19271805 - 19271920
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||| |||       |||||||| ||||||||||||||||||    
T  19271805 ttattaattgtagttagtggagtagttaagttggatgaaaattaataaataagggtataatattgg-aaaaaataataaatgttgcattggtattgtaaa 19271903  T
Q  126 gtgacaattattttgag 142  Q
    || ||||||||||||||    
T  19271904 gtaacaattattttgag 19271920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 25571498 - 25571361
Alignment:
Q  4 agtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaata 103  Q
    |||| ||||||||||||  || |||||| |||||||||||||| |||||||||| |||||||||||||||||||| |||||||| |         |||||    
T  25571498 agtatcatttactaaaatacccttattagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataat-taaaaaaataata 25571400  T
Q  104 aatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||| ||||||||||||| |||||||||||||||||||||    
T  25571399 aatgttgcattggtattctaaagtgacaattattttgag 25571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 28103807 - 28103671
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg---nnnnnnntaataaa 105  Q
    ||||||| ||||| || ||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||          |||||||    
T  28103807 catttaccaaaacacccttattaattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataatagtggaaaaaaaaaataataaa 28103708  T
Q  106 tattgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||||| | |||||||||||||||||||||||||||    
T  28103707 tgttgcaattgtattgtaaagtgacaattattttgag 28103671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 46478341 - 46478430
Alignment:
Q  2 ttagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||| ||||||||||||  || |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||    
T  46478341 ttagtagcatttactaaaatacccttattaattgtagttaattgagtagttaagttggatgaaattcaataaataagagtataatagtgg 46478430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21760031 - 21760172
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||| |||||| || ||| |||||||||||| ||||||||||||||| ||||||||||||||| | || ||||||||  ||       ||    
T  21760031 attagtatcatttaataaaacacccttactaattgtagttaatggagtagttaagttggatgaaattcaataattgagggtataataaaggaaaaatata 21760130  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||| |||| |||||||||||||||||||||    
T  21760131 ataaatgttgcattgatattctaaagtgacaattattttgag 21760172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 7457468 - 7457607
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||| |||||||||||||  || ||||||| ||||||||| ||| || |||||||  || |||||||||||||||||||||||||||||       ||    
T  7457468 attagttacatttactaaaagacccttattaaatgtagttagcggaataattaagttaaattaaattcaataaataagagtataatagtgg-aaaaaata 7457566  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    |||||| |||||||| ||||||||||||| |||||||||||    
T  7457567 ataaatgttgcattgatattgtaaagtgataattattttga 7457607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 42935735 - 42935599
Alignment:
Q  9 catttactaaaactccattattaattgtagttagt---ggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaa 105  Q
    ||||||||||||| || ||||||||||||||||||   |||| ||||||||| |||||| |||||||||||||||||| ||| | |       |||||||    
T  42935735 catttactaaaacacccttattaattgtagttagtggaggaggagttaagttggatgaagttcaataaataagagtattataattggaaaaaataataaa 42935636  T
Q  106 tattgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||||||| ||||| |||||||||||||||||||||    
T  42935635 tgttgcatttgtattctaaagtgacaattattttgag 42935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 43873997 - 43873864
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || ||||||| |||||||||||||||||||||||| |||||| || |||||||||  |||| ||| |||       ||||||||      
T  43873997 catttactaaaacacccttattaaatgtagttagtggagtagttaagttggatgaagtttaataaataaatgtattataatgggaaaaaataataaatgc 43873898  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||| |||||||||||||||||||||    
T  43873897 tgcattgatattctaaagtgacaattattttgag 43873864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 48608937 - 48608808
Alignment:
Q  12 ttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgc 111  Q
    ||||||||||  | |||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||       ||||||||| |||    
T  48608937 ttactaaaacatccttattaatcgtagttagtgatgtagttaagttggatgaaattcaataaataagagtataataatgg-aaaaaataataaatactgc 48608839  T
Q  112 attggtattgtaaagtgacaattattttgag 142  Q
    |||  |||| |||||||||||||||||||||    
T  48608838 attaatattttaaagtgacaattattttgag 48608808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 40076397 - 40076259
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| | ||||||||||||| ||||   | |||||||||| |||||||||||||||||||| || | ||| |||       ||    
T  40076397 attagtatcatttactaaaacactattattaattgtacttag---attagttaagttggatgaaattcaataaataagggtgtgataatggaaaaaaata 40076301  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||||||||| |||||||||||||||||||||    
T  40076300 ataaatgctgcattggtattataaagtgacaattattttgag 40076259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 9786062 - 9785929
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| |  ||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||  |        ||||||||      
T  9786062 catttactaaaacacgcttattaattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataataaagaaaaataataataaatgc 9785963  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||| |||||||||||||||||||||    
T  9785962 tgcattaatattttaaagtgacaattattttgag 9785929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 47045546 - 47045653
Alignment:
Q  29 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtg 128  Q
    |||||||| ||||||| |||||||||||| |||||||||||| ||||||||||||||||||||        || |||  ||||||||||||| |||||||    
T  47045546 ttaattgtggttagtgtagtagttaagttggatgaaattcaacaaataagagtataatagtggaa------aaaaaaagttgcattggtattctaaagtg 47045639  T
Q  129 acaattattttgag 142  Q
    ||||||||||||||    
T  47045640 acaattattttgag 47045653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 36790809 - 36790679
Alignment:
Q  14 actaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnntaataaatattgc 111  Q
    |||||||| || |||||||||||||||||| ||||||||| ||  |||||||||||||||||||| |||||||| |||         ||||||||  |||    
T  36790809 actaaaacacccttattaattgtagttagttgagtagttatgtcggatgaaattcaataaataagggtataataatggaaaaaataataataaatgctgc 36790710  T
Q  112 attggtattgtaaagtgacaattattttgag 142  Q
    |||| |||| |||||||||||||||||||||    
T  36790709 attgctattctaaagtgacaattattttgag 36790679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38391830 - 38391744
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||||||||| |  || |||||||||||||||||| || ||||||| ||||||||||||||||||| |||||||||    
T  38391830 attagtatcatttactaaaacactcttgttaattgtagttagtggaataattaagttggatgaaattcaataaataaaagtataata 38391744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 6494990 - 6495067
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||| |  |||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||    
T  6494990 atttactaaaacacttttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataata 6495067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 7463295 - 7463153
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||| |||  || | |||||||||||||||||||||||||||||| |||||||||||||||||||   || |||||||        ||    
T  7463295 attagtagcatttacttaaataccctcattaattgtagttagtggagtagttaagttggatgaaattcaataaataaagatagaatagtgaaaaataata 7463196  T
Q  101 ataaatattgca-ttggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||| ||| |||||||||||||| |||||||||||    
T  7463195 ataaatgatgcatttgttattgtaaagtgacgattattttgag 7463153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 49101719 - 49101659
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  49101719 tattaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaagtataata 49101659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 27921070 - 27920927
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata--gtggnnnnnnn 98  Q
    ||||||| |||||| |||||| |  ||||||||||||||||||| | |||||||||| |||||| |||||| ||||||||||| |||  | ||           
T  27921070 attagtatcatttattaaaacactcttattaattgtagttagtgcattagttaagttggatgaagttcaatcaataagagtattataatggggaaaaaaa 27920971  T
Q  99 taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||| |||||||  |||| |||||||||||||||||||||    
T  27920970 taataaatgttgcattaatattctaaagtgacaattattttgag 27920927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 32346124 - 32346240
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||| || |||||||||||||||||||  ||||||||||||||||||| |||||||| |||       ||||||||  |||||| ||||| ||||    
T  32346124 ttattaattataattagtggagtagttaagttgaatgaaattcaataaataagggtataataatggaaaaagataataaatgctgcattagtattctaaa 32346223  T
Q  126 gtgacaattattttgag 142  Q
     ||| ||||||||||||    
T  32346224 atgataattattttgag 32346240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 31930569 - 31930626
Alignment:
Q  26 ttattaattgtagttagtggagta--gttaagtttgatgaaattcaataaataagagt 81  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  31930569 ttattaattgtagttagtggagtatagttaagtttgatgaaattcaataaataagagt 31930626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 33819296 - 33819154
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg--gnnnnnnn 98  Q
    ||||||| ||||||| ||| | |  ||||||||||| ||| |||||||||| |||||  |||||||||| |||||||| |||||||||||              
T  33819296 attagtagcatttacaaaatcactcttattaattgttgtttgtggagtagtgaagttgaatgaaattcattaaataagggtataatagtgaaaataataa 33819197  T
Q  99 taataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  33819196 taataaatgctgcattggtattgtaaagtgacaattattttga 33819154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42796090 - 42796010
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagta---gttaagtttgatgaaattcaataaataag 78  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||   |||||||| ||||||||||| ||||||||    
T  42796090 attagtaacatttattaaaacacccttattaattgtagttagtggagtagttgttaagttggatgaaattcattaaataag 42796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 24167064 - 24166934
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnn-taataaatat 108  Q
    |||||||||||  || |||||||| |||||||||| ||||||||  ||  ||||||||||| ||||||| | |||| ||||         ||||||||||    
T  24167064 atttactaaaatacccttattaatagtagttagtgcagtagttacattgaatgaaattcaagaaataagggaataaaagtgaaataaaaataataaatat 24166965  T
Q  109 tgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||||||||||||||||||||||    
T  24166964 tgcattggtattgtaaagtgacaattatttt 24166934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22738783 - 22738693
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| ||||||||||||   | | |||||||||||||||| || |||||||||| ||||||||| |||||||||  ||||||||||||    
T  22738783 attagtatcatttactaaaatatcctcattaattgtagttagtagattagttaagttggatgaaatttaataaataaaggtataatagtgg 22738693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 26974100 - 26974018
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||||||||  |  ||||||||||||||||||||||||||||||||  |||||||| | |||||||  ||||||||||||    
T  26974100 catttactaaaatactcttattaattgtagttagtggagtagttaagttgaatgaaatttattaaataaatgtataatagtgg 26974018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 35333101 - 35333051
Alignment:
Q  25 attattaattgtagttagtggagtagttaagtttgatgaaattcaataaat 75  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  35333101 attattaattgtagttagtggagtagttaagttagatgaaattcaacaaat 35333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 30546413 - 30546485
Alignment:
Q  12 ttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    |||||||||| || |||||||||||||||| ||||||||||||||    |||||||||||||||||| |||||    
T  30546413 ttactaaaacacctttattaattgtagttattggagtagttaagtggagtgaaattcaataaataagggtata 30546485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 30866041 - 30865973
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||  |  ||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  30866041 catttactaaaatactcttattaattataattagtggagtagttaagttagatgaaattcaataaataa 30865973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5524462 - 5524369
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaat---tcaataaataagagtataatagtgg 91  Q
    |||||||||||||| |||||| |  ||||||||| |||||||| ||||||||||||| ||||||||   | |||||||||  ||||||||||||    
T  5524462 attagtaacatttaataaaacacttttattaattatagttagttgagtagttaagttggatgaaatttattaataaataaaggtataatagtgg 5524369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 13962016 - 13961965
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  13962016 ttattaagtgtagttagtggagtagttaagttggatgaaatttaataaataa 13961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 44424201 - 44424086
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||| |||||||||||||||| ||||||| |||||| ||||||||||||| |||| ||| | |       ||||||||  ||||||| |||| ||||    
T  44424201 ttattaaatgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataat-gaaaaaaataataaatgctgcattgatattttaaa 44424103  T
Q  126 gtgacaattattttgag 142  Q
    |||| ||||||||||||    
T  44424102 gtgataattattttgag 44424086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 4958674 - 4958736
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||| |||| | |||||||||||    
T  4958674 attaattatagttagtgaagtagttaagtttgatgaagttcaatcaataggggtataatagtg 4958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 32018971 - 32019053
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||||||||  |  ||||||||||| |||||||||||| ||||||| ||||||||| |||||||||| |  |||||||||    
T  32018971 catttactaaaatactcttattaattgttgttagtggagtaattaagttggatgaaatttaataaataagggattaatagtgg 32019053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 16560619 - 16560679
Alignment:
Q  3 tagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatga 63  Q
    ||||| |||||||||||||  | |||||||||||||||||||| ||||||||||| |||||    
T  16560619 tagtatcatttactaaaacatccttattaattgtagttagtggggtagttaagttggatga 16560679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 16605043 - 16604983
Alignment:
Q  3 tagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatga 63  Q
    ||||| |||||||||||||  | |||||||||||||||||||| ||||||||||| |||||    
T  16605043 tagtatcatttactaaaacatccttattaattgtagttagtggggtagttaagttggatga 16604983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 16904435 - 16904371
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||| ||||||||| | || ||||||| ||| |||||||||||||||| ||||||||||||    
T  16904435 tattaattatagttagtgaaataattaagttggatcaaattcaataaataagggtataatagtgg 16904371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 29780352 - 29780416
Alignment:
Q  228 ttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||||| |||||| ||||||| || ||||||||||||| || ||||||||| |||||||||||||    
T  29780352 ttggaaattccacctttattgcggtccgcccctagtcgcctaaattgcggcttttagtttgcctt 29780416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 37850807 - 37850863
Alignment:
Q  34 tgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||| |||||| |||||||| ||||||| ||||||||||||| ||||||||||    
T  37850807 tgtagttaatggagttgttaagttagatgaaaatcaataaataagaatataatagtg 37850863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 29198777 - 29198812
Alignment:
Q  51 ttaagtttgatgaaattcaataaataagagtataat 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  29198777 ttaagtttgatgaaattcaataaataagagtataat 29198812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29835461 - 29835550
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| ||||||||||||| |  |||||||||| |||||  ||||||||| |||| |||| ||||||||||||||   |||||||||||    
T  29835461 attagtagcatttactaaaacactcttattaattgcagttaacggagtagtt-agttggatgtaattcaataaataaagatataatagtgg 29835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 37490422 - 37490319
Alignment:
Q  36 tagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaatta 135  Q
    |||||||||||||| |||| ||  ||||||||||||||||||||| ||| ||||         |||||||| ||||||||||||| ||||||||| |||     
T  37490422 tagttagtggagtaattaaattgaatgaaattcaataaataagagcatactagtaaaaaataataataaatgttgcattggtattttaaagtgactattg 37490323  T
Q  136 tttt 139  Q
    ||||    
T  37490322 tttt 37490319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 17828423 - 17828473
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||| ||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  17828423 ttatcaattgtagttagtggagtaattaagttggatg-aattcaataaataa 17828473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 21937842 - 21937970
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||| | |  ||||||||||||||||||||||||||||| |  | || |||| |||||| ||| || || ||||||       ||||||||      
T  21937842 catttactaaagcactcttattaattgtagttagtggagtagttaattgaggtggaatttaataaacaagggtgtattagtgggggaaaataataaatgc 21937941  T
Q  109 tgcattggtattgtaaagtgacaattatt 137  Q
    |||||||| ||| |||| |||||||||||    
T  21937942 tgcattggcattctaaattgacaattatt 21937970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 28909923 - 28909986
Alignment:
Q  226 tgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgc 289  Q
    |||||||| |||| | |||||||||| ||||||||||||| || ||||||| ||||| ||||||    
T  28909923 tgttggaaattccgcctttattgtggtccgcccctagtcgcctaaattgcgccctttggtttgc 28909986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 32018767 - 32018849
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||||||||  |  ||||||||||| |||||| ||||| ||||||| ||| ||||| |||||||||| |  |||||||||    
T  32018767 catttactaaaatactcttattaattgtcgttagtagagtaattaagttggattaaatttaataaataagggcttaatagtgg 32018849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 17610958 - 17610913
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaata 72  Q
    ||||||||||||||| || | |||||||||| ||||||||||||||    
T  17610958 tattaattgtagttattgaaatagttaagttggatgaaattcaata 17610913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 31665789 - 31665842
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataaga 79  Q
    |||||||| ||||||||| |||||||||| || ||| || ||||||||||||||    
T  31665789 ttattaatagtagttagtagagtagttaaattagataaatttcaataaataaga 31665842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 37490510 - 37490457
Alignment:
Q  36 tagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||||||||| |||| ||  ||||||||||||||||||||| ||| ||||    
T  37490510 tagttagtggagtaattaaattgaatgaaattcaataaataagagcatactagt 37490457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 46602123 - 46602047
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataat 86  Q
    |||||||||||| || ||||| ||||||||||||| ||||||| |||    || |||| |||||||||| |||||||    
T  46602123 atttactaaaacacccttattcattgtagttagtgcagtagtttagtgcagtggaattgaataaataagggtataat 46602047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 35367869 - 35367736
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||        |||||||| |    
T  35367869 catttactaaaacacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataatagtgaaaaagactaataaatgt 35367770  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||||||||||||||||||||||||||||||||    
T  35367769 ttcattggtattgtaaagtgacaattattttgag 35367736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 39864186 - 39864045
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||  |  |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||       ||    
T  39864186 attagtagcatttactaaaatactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaata 39864087  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  39864086 ataaatgttgcattgatattgtaaagtgacaattattttgag 39864045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 6785304 - 6785190
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||| |||||| |||||||||||||    
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataatagtggaaaaaaataataaatgttgcataggtattgtaaagt 6785205  T
Q  128 gacaattattttgag 142  Q
    |||||||||||||||    
T  6785204 gacaattattttgag 6785190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 12039157 - 12039016
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||||||||||||| || |  |||||||||||||||| ||||||| ||||||| |||| ||||||||||||||| ||||||||||||       ||    
T  12039157 attagtaacatttactaatacactcttattaattgtagttaatggagtatttaagttggatgtaattcaataaataagggtataatagtggaaaataata 12039058  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  12039057 ataaatgttgcattagtattgtaaagtgacaattattttgag 12039016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20209883 - 20210024
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||||||||  | |||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||| |||       ||    
T  20209883 attagtatcatttactaaaacatccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaata 20209982  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||||||||| |||||||||||||||||||||    
T  20209983 ataaatgctgcattggtattctaaagtgacaattattttgag 20210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 24991705 - 24991886
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnntaataaatat 108  Q
    |||||||| ||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||||  |||||||||| ||       |||||||| |    
T  24991705 atttactacaacacctttattaattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaatgt 24991804  T
Q  109 tgcattggtattgtaaagtgacaattattttgagnnnnnnnnnnnntgctaaagaaacaataattgtgagacgaatggagta 190  Q
    |||||| |||||||||||||||||||||||||||            ||||||||| ||||||||||||||||| ||||||||    
T  24991805 tgcattagtattgtaaagtgacaattattttgagaaggaaaaaaaatgctaaagagacaataattgtgagacggatggagta 24991886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 49224029 - 49224170
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||| ||        ||    
T  49224029 attagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaaata 49224128  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||||| ||||| |||||||||||||||||||||    
T  49224129 ataaatgttgcattagtattctaaagtgacaattattttgag 49224170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 14757637 - 14757777
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||||||||||||||||| |  ||||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||||       |     
T  14757637 attagtaacatttactaaaacactcttattaattgtagttagtgaagtagttaagttcgatgaaatttaataaataagggtataatagtggaaaaaaatt 14757736  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||| ||||||||||| |||||||||||||||    
T  14757737 ataaattctgcatttgtattgtaaag-gacaattattttgag 14757777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 37506191 - 37506058
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||| |||       |||||||| |    
T  37506191 catttactaaaacacttttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtattataatggaaaaaaataataaatgt 37506092  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||| |||||||||||||||||||||    
T  37506091 tgcattgatattctaaagtgacaattattttgag 37506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 23169036 - 23169175
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||||||||  | ||||||||| ||||||||  | |||||||||  | |||||||||||||||||||||||||||||||       ||    
T  23169036 attagtagcatttactaaaacatccttattaattatagttagttaaatagttaagtgaggtgaaattcaataaataagagtataatagtgg--aaaagta 23169133  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  23169134 ataaatgttgcattggtattgtaaagtgacaattattttgag 23169175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 40144898 - 40145030
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || |||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||| |||       |||||||| |    
T  40144898 catttactaaaacacccttattaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaataataaatgt 40144997  T
Q  109 tgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||| |||| ||||||||||||||||||||    
T  40144998 tgcattgatattctaaagtgacaattattttga 40145030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36701996 - 36701910
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  36701996 attagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataata 36701910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36718100 - 36718014
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  36718100 attagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataata 36718014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 13579672 - 13579801
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||| ||||| ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |         ||||||||||    
T  13579672 catttacaaaaacacccatattaattgtagttagtggagtatttaagtttgatgaaattcaataaataagggtataataat-aaaaataataataaatat 13579770  T
Q  109 tgcattggtattgtaaagtgacaattatttt 139  Q
    ||||| |||||| ||||||||||||||||||    
T  13579771 tgcatcggtattttaaagtgacaattatttt 13579801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 7759282 - 7759150
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  |  ||||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||||||| |||       ||||||||      
T  7759282 catttactaaaatactcttattaattgtagttagtggaatagttaagttgaatgaaattcaataaataagggtataataatggaaaaaaataataaatga 7759183  T
Q  109 tgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||  |||||||||||||||||||||||||    
T  7759182 tgcattattattgtaaagtgacaattattttga 7759150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 9307694 - 9307612
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  9307694 catttactaaaacacccttgttaattgtagttagtggagtagttaagttggatgaaattcaataaataaaggtataatagtgg 9307612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 28749066 - 28748926
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||| ||||| || | |||||||| |||||||||  ||||||||| ||||||||||||       ||    
T  28749066 attagtagcatttactaaaacacccttattaattgtaattagtagaattgttaagttggatgaaattttataaataagggtataatagtgggaaaaaata 28748967  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||  ||||||| |||| |||||||| |||||||||||    
T  28748966 ataaatgctgcattgctattataaagtgataattattttga 28748926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 15699189 - 15699115
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtat 83  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  15699189 catttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 15699115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37276536 - 37276450
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| | ||||||||||| || ||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||    
T  37276536 attagtatcgtttactaaaacacccttattaattgtagttagtggaatagttaaattggatgaaattcaataaataagggtataata 37276450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 6023693 - 6023782
Alignment:
Q  2 ttagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||| | ||||||||||  || |||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||    
T  6023693 ttagtagcttttactaaaatacctttattaattgtagttattggagtagttaagttggatgaaattcaatacatgagagtataatagtgg 6023782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 22856288 - 22856369
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||||||  || | |||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  22856288 catttactaaaataccctaattaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataatagtg 22856369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 44707803 - 44707917
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||  |||||||||||| |  ||||||||||||||||||| || ||||||||| |||||||||||||||||||  ||||||||||||       ||    
T  44707803 attagtagtatttactaaaacacatttattaattgtagttagtgaagcagttaagttggatgaaattcaataaataaaggtataatagtggaaacaaata 44707902  T
Q  101 ataaatattgcattg 115  Q
    |||||||||||||||    
T  44707903 ataaatattgcattg 44707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16395090 - 16395229
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||  || || ||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||| | |       ||    
T  16395090 attagtatcatttactaaaataccttt-ttaattgtagttagtggagtagttaagttagatgaaattcaataaataatgatataataat-gaaaaaaata 16395187  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  | |||||||||| |||||||||||||||||||||    
T  16395188 ataaatcctacattggtattctaaagtgacaattattttgag 16395229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 33733305 - 33733446
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||| |||||||||||||||  |  |||||||||||||||||| |||| |||| ||   ||||||||||||||||||| |||||||| |||       ||    
T  33733305 attattaacatttactaaaatacttttattaattgtagttagtagagtggttaggtagaatgaaattcaataaataagggtataataatggaaaagaata 33733404  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  | |||||||||| |||||||||||||||||||||    
T  33733405 ataaatgcttcattggtattctaaagtgacaattattttgag 33733446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 52429411 - 52429279
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata--gtggnnnnnnntaataaat 106  Q
    |||||| |||||  || ||||||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||||  | |        ||||||||    
T  52429411 catttattaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaataagggtataataatgagaaaaaaaataataaat 52429312  T
Q  107 attgcattggtattgtaaagtgacaattatttt 139  Q
     |||||||| |||||||||||||||||||||||    
T  52429311 gttgcattgatattgtaaagtgacaattatttt 52429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 3260641 - 3260529
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||| |       |||||||||||| ||| ||||| ||||    
T  3260641 ttattaattgtagttagtggagaagttaagtttgatgaaattgaataaataagtttataatagtag-aacaaataataaatattgtattagtattctaaa 3260543  T
Q  126 gtgacaattatttt 139  Q
    |||| |||||||||    
T  3260542 gtgataattatttt 3260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 25089137 - 25089212
Alignment:
Q  10 atttactaaaac-tccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  25089137 atttactaaaacatcctttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtata 25089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 2572520 - 2572405
Alignment:
Q  25 attattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnt-aataaatattgcattggtattgta 123  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| | ||||||| |||       | |||||||||||||||| |||| ||    
T  2572520 attattaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaaatataataatggaaaaaaataaataaatattgcattgatatttta 2572421  T
Q  124 aagtgacaattatttt 139  Q
    ||||| ||||| ||||    
T  2572420 aagtggcaattgtttt 2572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 4659829 - 4659711
Alignment:
Q  23 ccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgt 122  Q
    |||| ||||||  |||||||||||||| |||||||  |||||||||||||||||||  |||||||||||        ||| ||| |||||||||||||||    
T  4659829 ccatcattaatgatagttagtggagtaattaagttgaatgaaattcaataaataaggatataatagtggaaaaaataaat-aatgttgcattggtattgt 4659731  T
Q  123 aaagtgacaattattttgag 142  Q
    ||||||||||||||||||||    
T  4659730 aaagtgacaattattttgag 4659711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 37539174 - 37539112
Alignment:
Q  29 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  37539174 ttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtatcatagtgg 37539112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 35682879 - 35682977
Alignment:
Q  43 tggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||       ||||||||||||||||| |||| |||| || |||||||||||||    
T  35682879 tggagtagttaagttggatgaaattcaataaataagggtataatagtgg-aaaaaataataaatattgcattgatattctaaattggcaattattttgag 35682977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10495913 - 10495838
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||| ||||||||||||| |  |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  10495913 attagtatcatttactaaaacact-ttattaattgtaattagtggagtagttaagttggatgaaattcaataaataa 10495838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 26256159 - 26256272
Alignment:
Q  29 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtg 128  Q
    ||||||||||||| | ||||||||||||| ||||||| |||||||| |||| |||||||||||       ||||||||  | |||||||||| |||||||    
T  26256159 ttaattgtagttaatagagtagttaagttggatgaaagtcaataaagaagaatataatagtggaaagaattaataaatgatacattggtattataaagtg 26256258  T
Q  129 acaattattttgag 142  Q
     |||||||||||||    
T  26256259 gcaattattttgag 26256272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 26093444 - 26093328
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||| |||| ||||||| |||||| ||||||||||||| |||||||| |||       |||||||| || |||| ||||  ||||    
T  26093444 ttattaattgtagttagtgaagtaattaagttagatgaagttcaataaataagggtataataatggaaaaatataataaatgttacattagtatactaaa 26093345  T
Q  126 gtgacaattattttgag 142  Q
    ||||||||| |||||||    
T  26093344 gtgacaattgttttgag 26093328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 27721581 - 27721470
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaag 126  Q
    ||||||||||||||||| || ||||||| || ||| ||||||||||||||| |||||||||||||       ||||||||  |||||| |||||||||||    
T  27721581 tattaattgtagttagtagaatagttaaattggataaaattcaataaataaaagtataatagtgg-aaaaaataataaatgatgcatttgtattgtaaag 27721483  T
Q  127 tgacaattatttt 139  Q
    || ||||||||||    
T  27721482 tggcaattatttt 27721470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 32826034 - 32826171
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagt---ggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnn 97  Q
    ||||||| ||||||||||||| || |||||||||||| |||||   |||||||||||||| |||||| ||||||||||||| |||| ||| |||          
T  32826034 attagtatcatttactaaaacacctttattaattgtaattagtggaggagtagttaagttggatgaagttcaataaataagggtattataatgg-aaaaa 32826132  T
Q  98 ntaataaatattgcattggtattgtaaagtgacaattat 136  Q
     |||||||| ||| |||||||||  ||||||||||||||    
T  32826133 ataataaatgttgtattggtatttcaaagtgacaattat 32826171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 9379282 - 9379169
Alignment:
Q  26 ttattaattgtagttagtgg-agtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaa 124  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||   |||||||| |||        |||||||||||||||| |||| |||    
T  9379282 ttattaattgtagttagtgggagtagttaagtttgatgaaatttaataaatataggtataataatggaaaaata-aataaatattgcattgatattctaa 9379184  T
Q  125 agtgacaattatttt 139  Q
    | |||||||||||||    
T  9379183 aatgacaattatttt 9379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 38787391 - 38787330
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||||    
T  38787391 ttattaattatagttagtggagtagttaaattggatgaaattcaataaataagggtataata 38787330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 8896400 - 8896460
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataat 86  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||||||    
T  8896400 ttattaattgtagttagtggagtggttaagttggatgaaattcaataaataaaggtataat 8896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 39887885 - 39887769
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg-gnnnnnnntaataaatattgcattggtattgtaa 124  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||||||  |||||| |||| |       ||| |||||||||| |  |||| |||    
T  39887885 ttattaatagtagttagttgagtaattaagtttgatgaaattcaataaataaatgtataacagtgagaaaaaaataacaaatattgcactaatattttaa 39887786  T
Q  125 agtgacaattattttga 141  Q
    |||||||||||||||||    
T  39887785 agtgacaattattttga 39887769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 34031578 - 34031656
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  || ||||||||||||||||||| | |||| | |||  ||||||||||||||||||||||||||||    
T  34031578 catttactaaaataccgttattaattgtagttagtgtaatagtaaggttgaatgaaattcaataaataagagtataata 34031656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 30754993 - 30755070
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||   ||||||||||| ||||||||| | |||||||||| |||||||||||||||||||  ||||||||    
T  30754993 atttactaaaatatcattattaattatagttagtgaaatagttaagttagatgaaattcaataaataaaggtataata 30755070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 45331408 - 45331276
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggag---tagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaa 105  Q
    ||||||||||||| || |||||||||||||||| |||||   |||||||||| |||||| |||||||||| || |||  ||| |||       |||||||    
T  45331408 catttactaaaacacccttattaattgtagttaatggaggaatagttaagttggatgaagttcaataaattagggtaatataatgg-aaaaaataataaa 45331310  T
Q  106 tattgcattggtattgtaaagtgacaattatttt 139  Q
    | ||||||||||||| |||||| |||||||||||    
T  45331309 tgttgcattggtattttaaagtaacaattatttt 45331276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 4441656 - 4441732
Alignment:
Q  11 tttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||| || || ||||||||||||||||||||| |||| || ||||||||| |||||||||  ||||||||    
T  4441656 tttactaaaacacccttgttaattgtagttagtggagtaattaaattagatgaaatttaataaataaaggtataata 4441732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31042872 - 31042731
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||  ||  || ||||||||||||| ||||| |||| |||||||  ||||||||||||||||||   ||| |||||||       ||    
T  31042872 attagtatcatttactgtaatacccttattaattgtaggtagtgaagtaattaagttgaatgaaattcaataaataaagatatcatagtggaaaaaaata 31042773  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  || |||| |||| |||||||||||||||||||||    
T  31042772 ataaatgatgtattgatattctaaagtgacaattattttgag 31042731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 37177886 - 37177822
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||| |||||||||  |||||||||||| ||| ||||| ||||||||||||||||||||||    
T  37177886 ttattaatggtagttagtatagtagttaagttggataaaattaaataaataagagtataatagtg 37177822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 917091 - 917013
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  || |||||||||||||||||| || ||||||||||  |||||||| |||||||||| ||| ||||    
T  917091 catttactaaaatacccttattaattgtagttagtagattagttaagttgcatgaaatttaataaataagggtaaaata 917013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 5179468 - 5179526
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataa 85  Q
    |||||||||||||||||||||||| ||| || |||||||||||  ||||||||||||||    
T  5179468 tattaattgtagttagtggagtagataaattggatgaaattcaggaaataagagtataa 5179526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29778439 - 29778529
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| ||||||||||||   ||||||||||||||||||||  || |  |||||| ||| ||||||||||||||| | |||||||||||    
T  29778439 attagtatcatttactaaaatatcattattaattgtagttagttaagaacctaagttggataaaattcaataaataataatataatagtgg 29778529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 31978720 - 31978832
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||| |||||| |||||||||||||||  || ||||||| |||||||| |||||||| |||        || ||||| | |||||||||||||||    
T  31978720 ttattaattatagttaatggagtagttaagttgaattaaattcattaaataagggtataataatgggaaaa---aaaaaatactacattggtattgtaaa 31978816  T
Q  126 gtgacaattattttga 141  Q
    || |||||||||||||    
T  31978817 gtaacaattattttga 31978832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 44761582 - 44761660
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||   | ||||||||| ||||||||||| | ||||||||  ||||||||||||||||||| ||||||||    
T  44761582 catttactaaaatatctttattaattatagttagtggaatggttaagttgaatgaaattcaataaataagggtataata 44761660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 7351702 - 7351625
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||   | ||||||||| ||||||||||| || ||||||| ||  |||||||||||||||||||||||||    
T  7351702 atttactaaaataaccttattaattctagttagtggaataattaagttggacaaaattcaataaataagagtataata 7351625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 41121877 - 41122007
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataa---ataagagtataatagtggnnnnnnntaataaat 106  Q
    |||||||||||  || |||||||||||||||||||||||     |||||||||||||| |||||   ||||| |||||||| ||        ||||||||    
T  41121877 atttactaaaatacccttattaattgtagttagtggagt-----agtttgatgaaatttaataaattataagggtataataatgaaaaaaaataataaat 41121971  T
Q  107 attgcattggtattgtaaagtgacaattattttgag 142  Q
     ||| |||| |||| |||||||||||||||||||||    
T  41121972 gttgtattgatattttaaagtgacaattattttgag 41122007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 24880943 - 24880874
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagt---taagtttgatgaaattcaataaat 75  Q
    ||||||||||||  |  ||||||||||||||||||||||||||   |||||| |||||||||||||||||    
T  24880943 catttactaaaatacttttattaattgtagttagtggagtagttagtaagttggatgaaattcaataaat 24880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 27897005 - 27896942
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||||| |||||||||||||| || |||| ||||||||| |||||||||  ||||||||||    
T  27897005 ttattaattatagttagtggagtaatttagttggatgaaatttaataaataaaggtataatagt 27896942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6160502 - 6160588
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||  |||||||||||  |  |||||||||||||||| |||| ||||||||||  ||| ||||||||||| ||| ||||||||    
T  6160502 attagtattatttactaaaatactcttattaattgtagttaatggaatagttaagttgaatgtaattcaataaacaagggtataata 6160588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21910049 - 21910133
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| | ||| ||||||| || ||||||| | ||||| | ||||||||||||||||||| ||||||||||||||| ||||||||    
T  21910049 attagtatcgtttgctaaaacacc-ttattaactatagtttgaggagtagttaagtttgatggaattcaataaataag-gtataata 21910133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 31154178 - 31154120
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    ||||||||||||||| || ||||  ||||||||||||||||||| |||||||| |||||    
T  31154178 ttattaattgtagttggtagagtgcttaagtttgatgaaattcagtaaataagtgtata 31154120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 3312126 - 3312056
Alignment:
Q  69 aataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||||||||||||||       |||||||| ||| |||| |||| ||||||||||||||||||    
T  3312126 aataaataagagtataatagtggaatataataataaatgttgtattgatattataaagtgacaattatttt 3312056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 11449935 - 11449875
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||||||| | ||||||| || || |||||||||||||||||||| ||||||||    
T  11449935 ttattaattgtagttaatagagtagtaaaattggatgaaattcaataaataag-gtataata 11449875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 17988823 - 17988929
Alignment:
Q  36 tagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaatta 135  Q
    |||||| |||||||||||| || |||| ||   |||||||| ||||||||||||||       |||||||| |||||||  |||| |||| |||||||||    
T  17988823 tagttaatggagtagttaatttggatgtaacaaaataaatatgagtataatagtggaaagaaataataaatgttgcattaatattttaaaatgacaatta 17988922  T
Q  136 ttttgag 142  Q
    |||||||    
T  17988923 ttttgag 17988929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 32219729 - 32219777
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaa 74  Q
    ||||||||| ||||| ||||||| |||||||| ||||||||||||||||    
T  32219729 ttattaattatagtttgtggagtggttaagttggatgaaattcaataaa 32219777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 42410061 - 42409993
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||| | || |||||||||||||||||| |  |||||||||  |||||| ||||||||||||    
T  42410061 catttactaaagcacccttattaattgtagttagttggatagttaagtaggatgaagttcaataaataa 42409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 2137437 - 2137488
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||| |||| ||||||| ||||||| ||| |||||||||||||||    
T  2137437 ttattaattgttgttattggagtatttaagttggataaaattcaataaataa 2137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 9412873 - 9412982
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaa-taaatattgcattggtattgtaaag 126  Q
    |||||||||||||| |||| |||||  ||| |||||||||||||||||||  |||  ||||||        ||| ||||| ||||||| |||||||||||    
T  9412873 attaattgtagttaatggaatagttgggttggatgaaattcaataaataattgta--atagtgaaaataaataaataaattttgcattagtattgtaaag 9412970  T
Q  127 tgacaattattt 138  Q
    ||||||||||||    
T  9412971 tgacaattattt 9412982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 15904801 - 15904751
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaata 76  Q
    ||||||||||||||||||| |||||||||||    ||||||||||||||||    
T  15904801 ttattaattgtagttagtgaagtagttaagtgaagtgaaattcaataaata 15904751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 45615598 - 45615557
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtag 50  Q
    |||||||||||| ||| |||||||| ||||||||||||||||    
T  45615598 catttactaaaattcccttattaatagtagttagtggagtag 45615557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 52837330 - 52837269
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||| |||||||||||||||  |  |||||||||||||| |||  ||||||||    
T  52837330 ttattaattgtagctagtggagtagttaatatgaatgaaattcaataattaaaggtataata 52837269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 24500058 - 24500110
Alignment:
Q  38 gttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||| ||||||||||||| |||||||||||| ||||||  || ||||||||    
T  24500058 gttagttgagtagttaagttagatgaaattcaacaaataatggtgtaatagtg 24500110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 35538684 - 35538644
Alignment:
Q  47 gtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||| ||||||||||||||||||| | |||||||    
T  35538684 gtagttaagttagatgaaattcaataaataatattataata 35538644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 35313937 - 35313821
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||  |||||||||    
T  35313937 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggaaaaaagtaataaatgttgcattattattgtaaa 35313838  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  35313837 gtgacaattattttgag 35313821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 3323335 - 3323451
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||       ||||||||  |||||||||||||||||    
T  3323335 ttattaattgtagttagtggagtagttaagttggatgaaattcaataagtaagagtgtaatagtgggaaaaaataataaatgctgcattggtattgtaaa 3323434  T
Q  126 gtgacaattattttgag 142  Q
    |||| ||||||||||||    
T  3323435 gtgagaattattttgag 3323451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 5789694 - 5789826
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || ||||||||||||||||||| | |||||||||| |||||||||||||||||||  ||||||||||||       ||||||||      
T  5789694 catttactaaaacacccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtgg-aaaaaataataaatga 5789792  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||||||||||||||||||||||||||    
T  5789793 tgcattgatattgtaaagtgacaattattttgag 5789826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 34120500 - 34120616
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||       ||||||||  |||||||||||| ||||    
T  34120500 ttattaattgtagttagtggaatagttaagttggatgaaattcaataagtaagagtataataatggaaaaaaataataaatgctgcattggtattttaaa 34120599  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  34120600 gtgacaattattttgag 34120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 8947090 - 8947232
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||| ||||||||||||  | ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| | |       ||    
T  8947090 attagtaatatttactaaaacatccttattaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataataat-gaaaaaaata 8947188  T
Q  101 ataaatattgcattggta---ttgtaaagtgacaattattttga 141  Q
    ||||||||||||||||||   ||||||| |||||||||||||||    
T  8947189 ataaatattgcattggtattgttgtaaaatgacaattattttga 8947232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 14523418 - 14523551
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||   | |||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||| |||       |||||||| |    
T  14523418 catttactaaaatatccttattaattgtagttagtggagtagttaagttagatgaaattcaattaataaggatataataatggaaaataataataaatgt 14523517  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||| |||||||||||||||||||||    
T  14523518 tgcattgatattctaaagtgacaattattttgag 14523551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 16463764 - 16463621
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnn 98  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||| |||| |||             
T  16463764 attagtatcatttactaaaacacccttattaattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaataatggaaaaaataa 16463665  T
Q  99 taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||  |||||||||||| |||||||||||||||||||||    
T  16463664 taataaatgctgcattggtattctaaagtgacaattattttgag 16463621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 36354506 - 36354621
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| |||       ||||||||  |||||||||||| ||||    
T  36354506 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataataatgg-aaaaaataataaattctgcattggtattctaaa 36354604  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  36354605 gtgacaattattttgag 36354621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 43410493 - 43410363
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||   | |||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||||||| |||       |||||||| |    
T  43410493 catttactaaaatatccttattaattgtagttaatggagtagttaagttgaatgaaattcaataaatgagagtataataatggaaaaaaataataaatgt 43410394  T
Q  109 tgcattggtattgtaaagtgacaattatttt 139  Q
    |||||| ||||| ||||||||||||||||||    
T  43410393 tgcattagtattctaaagtgacaattatttt 43410363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 9458319 - 9458444
Alignment:
Q  16 taaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattg 115  Q
    |||||| || |||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||| |||       ||||||||  |||||||    
T  9458319 taaaacacccttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataatgg-aaaaaataataaatgctgcattg 9458417  T
Q  116 gtattgtaaagtgacaattattttgag 142  Q
    ||||| |||||||||||||||||||||    
T  9458418 gtattctaaagtgacaattattttgag 9458444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 35242360 - 35242461
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||        |||||||||||||||||||||| ||||    
T  35242360 ttattaattgtagttagttgagtagttaagttggatgaaattcaataaataaaagtataatagtgaaaactaataataaatattgcattggtattctaaa 35242459  T
Q  126 gt 127  Q
    ||    
T  35242460 gt 35242461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36794359 - 36794218
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| | ||||||||||| || ||||||| |||||||||||||||||||||||| |||||| ||||||||||||| |||| ||| ||        ||    
T  36794359 attagtatcttttactaaaacgcccttattaactgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaaata 36794260  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||||||||| |||||||| ||||||||||||    
T  36794259 ataaatgctgcattggtattttaaagtgataattattttgag 36794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 39785652 - 39785519
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| |  |||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||| |||       || |||||      
T  39785652 catttactaaaacactcttattaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaaaatagtaaatgc 39785553  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  39785552 tgcattggtattctaaagtgacaattattttgag 39785519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 37322495 - 37322363
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||| |||||  || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||       ||||||||      
T  37322495 catttattaaaatacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatgg-aaaaaataataaatgc 37322397  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||| |||||| |||||||||||||||||||||    
T  37322396 tacataggtattctaaagtgacaattattttgag 37322363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 25637548 - 25637414
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaata 107  Q
    ||||||||||||| || ||||||||||||||||  |||||||||||||| ||||||||| |||||||||| || ||||| |||        ||||||||     
T  25637548 catttactaaaacacctttattaattgtagttataggagtagttaagttggatgaaatttaataaataagggtgtaataatggaaaaaaaataataaatg 25637449  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
     |||||||||||| |||||||||||||||||||||    
T  25637448 ctgcattggtattctaaagtgacaattattttgag 25637414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 34225656 - 34225527
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatatt 109  Q
    |||||||||||| || |||||||||||||||| ||||||| |||||||  |||||||| |||||||||| |||||||| ||        ||||||||| |    
T  34225656 atttactaaaacacccttattaattgtagttaatggagtatttaagttgaatgaaatttaataaataagggtataataatgaaaaaaaataataaatact 34225557  T
Q  110 gcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||  |||||||||||||||||    
T  34225556 gcattggtattccaaagtgacaattatttt 34225527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 15359133 - 15359268
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg--gnnnnnnntaataaat 106  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||| ||          ||||||||    
T  15359133 catttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaatactaataaat 15359232  T
Q  107 attgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||||||| |||| |||||| ||||||||||||||    
T  15359233 actgcattgatattctaaagtaacaattattttgag 15359268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 45235648 - 45235513
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg--gnnnnnnntaataaat 106  Q
    ||||||||||||| || |||||||||||||||| || | |||||||||||||||||||||||||||||||  |||| || ||          ||||||||    
T  45235648 catttactaaaacacccttattaattgtagttaatgaaatagttaagtttgatgaaattcaataaataaggatatagtaatgaaaaaaataataataaat 45235549  T
Q  107 attgcattggtattgtaaagtgacaattattttgag 142  Q
     ||||||||||||| |||||||||||||||||||||    
T  45235548 gttgcattggtattataaagtgacaattattttgag 45235513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 17695380 - 17695262
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnntaataaatattgcattggtattgta 123  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||         ||||||||  ||||||| |||| ||    
T  17695380 ttattaattatagttagtagagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaataataataaatgctgcattgatattcta 17695281  T
Q  124 aagtgacaattattttgag 142  Q
    |||||||||||||||||||    
T  17695280 aagtgacaattattttgag 17695262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 5272204 - 5272314
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagt 127  Q
    |||||||||||||||||||||| |||| || |||||||||||||||||||| |||||||| |||       |||||||| ||||||| ||||| ||||||    
T  5272204 attaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtataataatgg-gaaaaataataaatgttgcatttgtattctaaagt 5272302  T
Q  128 gacaattatttt 139  Q
    ||||||||||||    
T  5272303 gacaattatttt 5272314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 11742575 - 11742648
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtat 83  Q
    ||||| |||||| || |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  11742575 atttattaaaacacccttattaattgtagttaatggagtagttaagtttgatgaagttcaataaataagggtat 11742648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 7494909 - 7495018
Alignment:
Q  34 tgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg-gnnnnnnntaataaatattgcattggtattgtaaagtgacaa 132  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||         ||||||||  |||||||||||| |||||||||||    
T  7494909 tgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatgaaaaaaaaataataaatgctgcattggtattctaaagtgacaa 7495008  T
Q  133 ttattttgag 142  Q
    ||||||||||    
T  7495009 ttattttgag 7495018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 26863421 - 26863539
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg---nnnnnnntaataaatattgcattggtattgt 122  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||  ||||||||||||          |||||||| || ||| | ||||||    
T  26863421 ttattaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataatagtggaaaagaaatataataaattttacatagatattgt 26863520  T
Q  123 aaagtgacaattattttga 141  Q
    |||||||||||||||||||    
T  26863521 aaagtgacaattattttga 26863539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 16377719 - 16377787
Alignment:
Q  26 ttattaattgtagttagtggagtagttaa----gtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||||||||||||||||||||||||    ||| ||||||||||||||||||| ||||||||||||    
T  16377719 ttattaattgtagttagtggagtagttaattaagttggatgaaattcaataaataaaagtataatagtg 16377787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 17346425 - 17346476
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  17346425 ttattaattgtagttagtggagtagttaagttggaagaaattcaataaataa 17346476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 39691557 - 39691479
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  |  |||||||||| ||||||||||||||| |||||  ||||||||||||||||||| ||||||||    
T  39691557 catttactaaaatactcttattaattgcagttagtggagtagtaaagttgaatgaaattcaataaataagggtataata 39691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 19937435 - 19937374
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||  ||||||||    
T  19937435 ttattaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataata 19937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 31448739 - 31448808
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||||||| || ||| |||||| |||||||| | |||||||||| ||||||||||||||||||||    
T  31448739 catttactaaaacacccttactaattgcagttagtgaaatagttaagttggatgaaattcaataaataag 31448808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 32831221 - 32831289
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||||||||||  | |||||||||||||||| |||||||||||| |  |||||||||||||||||||    
T  32831221 catttactaaaacatctttattaattgtagttattggagtagttaaatgagatgaaattcaataaataa 32831289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 39329710 - 39329777
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||| |  |||||||||||||||| |||||||||||| || |||||||||||||||||||    
T  39329710 catttactaaaacactcttattaattgtagtta-tggagtagttaaattggatgaaattcaataaataa 39329777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 7438917 - 7438980
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| || ||| |||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  7438917 attaattataattattggagtagttaagttgaatgaaattcaataaataagggtataatagtgg 7438980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 17123036 - 17122973
Alignment:
Q  24 cattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||||| ||||| |||| ||||  || |||||||||||||||||||||||||||||    
T  17123036 cattattaattgtaattagttgagttgttagattagatgaaattcaataaataagagtataata 17122973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 28186264 - 28186148
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||| ||| |||||||  |||||||||||||  |||||||||||||||||| |  ||||||||||       |||| |||| ||||||  |||| ||||    
T  28186264 ttattcattttagttagcagagtagttaagttgaatgaaattcaataaataaaaaaataatagtggaaaaatataattaatactgcatttatattataaa 28186165  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  28186164 gtgacaattattttgag 28186148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 43115841 - 43115968
Alignment:
Q  2 ttagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaa 101  Q
    |||||| ||||||||||||  |  ||||| ||||||||||||||||||||||||||  |||||||||||  |||||  |||||||| |||       |||    
T  43115841 ttagtagcatttactaaaatactcttatttattgtagttagtggagtagttaagttgaatgaaattcaacgaataatggtataataatggaaaaaaataa 43115940  T
Q  102 taaatattgcattggtattgtaaagtga 129  Q
    |||||  | ||||| |||||||||||||    
T  43115941 taaatgctacattgatattgtaaagtga 43115968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16805956 - 16805879
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||| ||||||||||||   | ||||||||||||||||||||||| |||||||| ||| ||||| |||| |||||    
T  16805956 attagtatcatttactaaaatatccttattaattgtagttagtggagttgttaagttggattaaatttaatagataag 16805879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16845237 - 16845160
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||| ||||||||||||   | ||||||||||||||||||||||| |||||||| ||| ||||| |||| |||||    
T  16845237 attagtatcatttactaaaatatccttattaattgtagttagtggagttgttaagttggattaaatttaatagataag 16845160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 19444197 - 19444083
Alignment:
Q  25 attattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaa 124  Q
    ||||||||||||| ||||| ||||||||||| | ||| || ||||||||| ||| |||||||| ||        |||||||| |||||||| |||| | |    
T  19444197 attattaattgtaattagtcgagtagttaagatggataaatttcaataaacaagggtataataatgtaaaaaaataataaatgttgcattgatattttga 19444098  T
Q  125 agtgacaattatttt 139  Q
    |||||||||||||||    
T  19444097 agtgacaattatttt 19444083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 28170646 - 28170710
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||||||||||| | || || |||| || |||||||||| |||||||||||||||||||||    
T  28170646 ttattaattgtagttaatagaataattaaattggatgaaattctataaataagagtataatagtg 28170710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 25441587 - 25441653
Alignment:
Q  226 tgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||||||| |||||| ||||||| || ||||||||||||| || ||||||||||||| ||| |||||    
T  25441587 tgttggaaattccacctttattgcggtccgcccctagtcgcctaaattgcggcctttggttagcctt 25441653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 1206775 - 1206815
Alignment:
Q  47 gtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  1206775 gtagttaagttggatgaaattcaataaatatgagtataata 1206815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 18202152 - 18202104
Alignment:
Q  29 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||| ||||||||||| |||||||||||| ||||||||| |||||||||    
T  18202152 ttaaatgtagttagtgaagtagttaagttggatgaaatttaataaataa 18202104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 18853264 - 18853316
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    |||||| ||||||||||| ||||| |||| || ||||||||||||||||||||    
T  18853264 ttattagttgtagttagtagagtaattaatttggatgaaattcaataaataag 18853316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19426530 - 19426474
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtt 57  Q
    ||||| ||||||||||||||   |||||||||||||||| ||| |||||||||||||    
T  19426530 attagcaacatttactaaaatatcattattaattgtagtaagtcgagtagttaagtt 19426474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 45464057 - 45464009
Alignment:
Q  41 agtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||| ||||||||| || ||||||||||||||||||| |||||||||||    
T  45464057 agtgaagtagttaaattagatgaaattcaataaataaaagtataatagt 45464009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 34120657 - 34120700
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||  |||||||||||| |||||||||||||||||||||    
T  34120657 taataaatgctgcattggtattttaaagtgacaattattttgag 34120700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 43699672 - 43699723
Alignment:
Q  39 ttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||||| ||||||| ||| |||||||||||| ||| |||||||||||    
T  43699672 ttagtggagtaattaagttggataaaattcaataaacaagggtataatagtg 43699723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 43730665 - 43730603
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||||||||||| | ||||||||||| | | ||||||||||||||||| |||||| ||||    
T  43730665 ttattaattgtagttactagagtagttaag-taggtgaaattcaataaataaaagtatattagt 43730603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 8928585 - 8928547
Alignment:
Q  100 aataaatattgcattggtattgtaaagtgacaattattt 138  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  8928585 aataaatactgcattggtattataaagtgacaattattt 8928547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 26608189 - 26608267
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  |  ||||||||| ||||||||||| ||||||||||  |||||| | | |||||||| ||||||||    
T  26608189 catttactaaaatactcttattaattatagttagtggattagttaagttgaatgaaaataattaaataagggtataata 26608267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 36173425 - 36173463
Alignment:
Q  51 ttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  36173425 ttaagtttaatgaaattcaataaataaaagtataatagt 36173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 142
Target Start/End: Original strand, 34451400 - 34451511
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagt 127  Q
    ||||||| |||||| || | ||||| |||| |||||||||||||||||||  | |||||| |||        | ||||| |||||||| |||| ||||||    
T  34451400 attaattctagttattgaaatagtttagttggatgaaattcaataaataaaggcataatactgggaaaa---attaaatgttgcattgatattctaaagt 34451496  T
Q  128 gacaattattttgag 142  Q
    |||||||||||||||    
T  34451497 gacaattattttgag 34451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 41221009 - 41221058
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaat 75  Q
    |||||||||||||||| || |||||||||||  |||||| ||||||||||    
T  41221009 ttattaattgtagttaatgaagtagttaagtcagatgaagttcaataaat 41221058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 30166292 - 30166236
Alignment:
Q  226 tgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggccttt 282  Q
    |||||||| |||| | || ||||||| ||||||||||||| |||||||||| |||||    
T  30166292 tgttggaaattccgccttaattgtggtccgcccctagtcgccttaattgcgaccttt 30166236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 35380379 - 35380521
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||        |    
T  35380379 attagtagcatttactaaaacatcattattaattgtagttagtggagtggttaagttggatgaaattcaataaataagagtataataatggaaaaaaaat 35380478  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  35380479 aataaatgttgcattggtattataaagtgacaattattttgag 35380521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 47773065 - 47773206
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||| |||       ||    
T  47773065 attagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatggaaaaaaata 47773164  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||||||||| |||||||||||||||||||||    
T  47773165 ataaatgctgcattggtattctaaagtgacaattattttgag 47773206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17237342 - 17237432
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  17237342 attagtaacatttactaaaacaaccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtgg 17237432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11907645 - 11907786
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||||||| ||||||||||||||| |||||| ||||||||||||  |||| ||| |||       ||    
T  11907645 attagtatcatttactaaaacacccttattaattgtagttattggagtagttaagttggatgaagttcaataaataaatgtattataatggaaaaaaata 11907744  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||||||||| |||||||||||||||||||||    
T  11907745 ataaatgctgcattggtattctaaagtgacaattattttgag 11907786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 51624836 - 51624720
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||       |||||||| || ||||| |||||||||    
T  51624836 ttattatttgtagttagtggagtagttaagttggatgaaattcaataaataagggtatgatagtggaaaaaaataataaatgttacattgatattgtaaa 51624737  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  51624736 gtgacaattattttgag 51624720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 22130118 - 22129976
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| ||||||| |||||  | |||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||| |||        |    
T  22130118 attagtatcatttacaaaaacatccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataataatggaaaaaaaat 22130019  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  22130018 aataaatgttgcattggtattgtaaaatgacaattattttgag 22129976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 34360730 - 34360592
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||        |    
T  34360730 attagtagcatttactaaaacactcttattaattgtagttagtggagtagttaagttgaataaaattcaataaataagggtataatagtggaaaaaaaaa 34360631  T
Q  101 ataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    | |||| ||  ||||||||||||||||||||||||||||    
T  34360630 aaaaatgttaaattggtattgtaaagtgacaattatttt 34360592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 49175980 - 49176122
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnnt 99  Q
    ||||||| ||||||||||||   | ||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||||||| ||       |    
T  49175980 attagtatcatttactaaaataaccttattaattgtagttagcggagtagttaagttggataaaattcaataaataagggtataatagtgggaaaaaaat 49176079  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||| | ||||||||||||| |||||||||||||||||||||    
T  49176080 aataattgttgcattggtattctaaagtgacaattattttgag 49176122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 6643706 - 6643894
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||||||||  | ||||||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||||        |    
T  6643706 attagtagcatttactaaaacatctttattaattgtagttagtggtatagttaagttggatgaaattcaataaataagggtataatagtggaaaaata-a 6643804  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgagnnnnnnnnnnnntgctaaagaaacaataattgtgagacgaatggagta 190  Q
    ||||||  ||| |||  |||||||||||||||||||||||||            ||||||||| ||||||||||||||||| ||||||||    
T  6643805 ataaatgctgcgttgaaattgtaaagtgacaattattttgaggaaaagaaaatatgctaaagagacaataattgtgagacggatggagta 6643894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 49747036 - 49746895
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    |||||||  |||||||||||  || | ||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||        |    
T  49747036 attagtagtatttactaaaataccttcattaattatagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaaaaataat 49746937  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  49746936 aataaatgttgcattggtattgtaaagtgacaattattttga 49746895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 53346826 - 53346746
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53346826 catttactaaaacacccttattaattttagttagtggagtagttaagtttgatgaaattcaataaatatgagtataatagt 53346746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 35311277 - 35311412
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnntaataaat 106  Q
    ||||||||| ||| |  |||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||| |||         ||||||||    
T  35311277 catttactagaacactcttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataatattggaaaaaataataataaat 35311376  T
Q  107 attgcattggtattgtaaagtgacaattattttgag 142  Q
     |||||||||||||||||||||||||||||||||||    
T  35311377 gttgcattggtattgtaaagtgacaattattttgag 35311412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 49428397 - 49428528
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatatt 109  Q
    |||||||||||  || |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||       |||||||| ||    
T  49428397 atttactaaaatacccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataataatggaaaaaagtaataaatgtt 49428496  T
Q  110 gcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| | || |||||||||||||||||||||    
T  49428497 gcattgat-ttctaaagtgacaattattttgag 49428528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 40122900 - 40123039
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnnt 99  Q
    ||||||| ||||||||||||| || ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||| ||| || ||       |    
T  40122900 attagtagcatttactaaaacacccttattgattgtagttagtggagcagttaagttcgacgaaattcaataaataagggtacaatggtgggaaaaaaat 40122999  T
Q  100 aataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  40123000 aataaatgttgcattggtattgtaaagtgataattatttt 40123039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 47464411 - 47464550
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| ||||||||||||  |  ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||        |    
T  47464411 attagtagcatttactaaaaaactcttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaat 47464510  T
Q  100 aataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||| |||||||||||||||||  || |||||||||    
T  47464511 aataaataatgcattggtattgtaaaacgataattatttt 47464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 5841481 - 5841615
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtag-ttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaata 107  Q
    ||||||||||||  || ||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||| |||       ||||||||     
T  5841481 catttactaaaatacccttattaattgtagttagtggagtagtttaagttggatgaaattcaataaataaaggtataataatggaaattaataataaatg 5841580  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
     ||||||| |||| |||||||||||||||||||||    
T  5841581 atgcattgatattctaaagtgacaattattttgag 5841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 38405156 - 38405290
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaata 107  Q
    ||||||||||||  || |||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||||| |||        ||||||||     
T  38405156 catttactaaaatacccttattaattgtagttagtggtgtagttaagttggatgaaattcaataaataaaggtataataatggaaaaaaagtaataaatg 38405255  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||| |||| |||||||||||||||||||||    
T  38405256 ttgcattgctattctaaagtgacaattattttgag 38405290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 52859845 - 52859981
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||||||||  | ||||||||||||||||||||||||||||||||  ||||||||||||     || |||||||| |||       ||    
T  52859845 attagtatcatttactaaaacatccttattaattgtagttagtggagtagttaagttgaatgaaattcaat-----agggtataataatgggaaaaaata 52859939  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  52859940 ataaatgttgcattggtattctaaagtgacaattattttgag 52859981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 42616974 - 42617090
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||||||||| |||||||| |||       |||||||| ||||||| ||||| ||||    
T  42616974 ttattaattgtagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataataatggaaaataataataaatgttgcatttgtattctaaa 42617073  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  42617074 gtgacaattattttgag 42617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 33790785 - 33790863
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  33790785 catttgctaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataata 33790863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21240750 - 21240887
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||||| ||  | |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||             
T  21240750 attagtatcatttactaacacatccttattaattgtagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaaaat---- 21240845  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||| |||| |||||||||| ||||||||||    
T  21240846 ataaatgttgcattgatattctaaagtgacatttattttgag 21240887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43237318 - 43237229
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||| |||||||||||   ||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  43237318 attagtaatatttactaaaaaatcattattaattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtataatagtg 43237229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 44536251 - 44536381
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnt--aataaata 107  Q
    ||||| |||||| || ||||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||       |  |||||||     
T  44536251 atttattaaaacacccttattaattgtagttagtggagtagctaagttagatgaaattcaa-aaataagggtataatagtggaaaagaataaaataaatg 44536349  T
Q  108 ttgcattggtattgtaaagtgacaattatttt 139  Q
     |||||| ||||||||||||||||||||||||    
T  44536350 ctgcattagtattgtaaagtgacaattatttt 44536381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32884876 - 32884786
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| |||||| |||||| |  |||||||||||||||||||||||||||||||| |||| |||||||||||||||  |||||||||||    
T  32884876 attagtagcatttagtaaaacactcttattaattgtagttagtggagtagttaagttggatggaattcaataaataaggatataatagtgg 32884786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 7061710 - 7061851
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||| ||   | ||||||||||||||||||||| || |||||||  ||||||||||||||||||| |||||||||||        ||    
T  7061710 attagtatcatttactataatatctttattaattgtagttagtggattaattaagttgaatgaaattcaataaataagggtataatagtgaaaataaata 7061809  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||| |||| |||| |||||| ||||||||||||||    
T  7061810 ataaatgttgtattgatattttaaagtaacaattattttgag 7061851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26147661 - 26147805
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaa-attcaataaataagagtataatagtggnnnnnnnt 99  Q
    ||||||| |||||||||||||    |||||||||||||||||||||||| ||||||| ||||||  ||||||||||||| |||||||| |||       |    
T  26147661 attagtatcatttactaaaacattcttattaattgtagttagtggagtaattaagttggatgaattttcaataaataagggtataataatggaaaaaaat 26147760  T
Q  100 --aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
      ||||||| ||| ||||||||| |||||||||||||||||||||    
T  26147761 aaaataaatgttgtattggtattctaaagtgacaattattttgag 26147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 2066855 - 2066725
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatatt 109  Q
    ||||| |||||| || ||||||||| |||||||||| ||||||||||| |||||||||||||||||||  |||||||| ||        ||||||||  |    
T  2066855 atttattaaaacacccttattaattttagttagtggggtagttaagttagatgaaattcaataaataaaggtataataatg--aaaaaataataaatgct 2066758  T
Q  110 gcattggtattgtaaagtgacaattattttgag 142  Q
     |||||||||| |||||||||||||||||||||    
T  2066757 tcattggtattctaaagtgacaattattttgag 2066725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 54506840 - 54506777
Alignment:
Q  24 cattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  54506840 cattatcaattgtagttagtggagtagttaagtttgatgaaattcaattaataagaatataata 54506777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6609836 - 6609750
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||| |||||  | |||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  6609836 attagtatcatttacaaaaacatctttattaattgtaattattggagtagttaagttggatgaaactcaataaataagagtataata 6609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 16821377 - 16821516
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg-gnnnnnnnt 99  Q
    ||||||| ||||||||| ||   | ||||||||| |||||||||||||| |||||||  ||||||||||||||||||| |||||||||||         |    
T  16821377 attagtatcatttactataatatccttattaattatagttagtggagtatttaagttgaatgaaattcaataaataagggtataatagtgcaaaaataat 16821476  T
Q  100 aataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||  |||||||||||| ||||||||||||||||||    
T  16821477 aataaatgctgcattggtattctaaagtgacaattatttt 16821516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17114515 - 17114439
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||||||||| || || ||| ||||||||||||    
T  17114515 attagtatcatttactaaaacacccttattaattgtagttagtggagtagttaatttggaggaagttcaataaataa 17114439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 25233256 - 25233116
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| | | |||||||| ||||||||| |||||||||||| |||||| ||||||||||||   ||| ||| | |       ||    
T  25233256 attagtatcatttactaaaacactagtattaattatagttagtgaagtagttaagttggatgaagttcaataaataaagatattataat-gaaaaaaata 25233158  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||| |||| |||||||||||||||||||||    
T  25233157 ataaatgttgcattgatattctaaagtgacaattattttgag 25233116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 52247483 - 52247611
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatatt 109  Q
    |||||||||||   | ||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||||  |||       |||||||| ||    
T  52247483 atttactaaaatatccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaataagtgtataatgatggaaaagaataataaatgtt 52247582  T
Q  110 gcattggtattgtaaagtgacaattatttt 139  Q
      |||||| |||||||||||||||||||||    
T  52247583 ctattggt-ttgtaaagtgacaattatttt 52247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 18741545 - 18741608
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||    
T  18741545 ttattaattgtagttaatggagtagttaagttggatgaaattcaataaataagtttataatagt 18741608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2942691 - 2942831
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg---nnnnnn 97  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||  ||||| ||||||||| ||   |||||||||||             
T  2942691 attagtagcatttactaaaacacc-ttattaattgtagttagtggagtggttaagttgaatgaatttcaataaacaaagatataatagtggaaaaaaata 2942789  T
Q  98 ntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
     ||||||||||| ||||| ||||||||| |||||||||||||    
T  2942790 ataataaatatttcattgatattgtaaaatgacaattatttt 2942831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 28911249 - 28911340
Alignment:
Q  48 tagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||||||||||||||||||||||||||||||| |||       |||||||| |||||||| |||| ||||  ||||||||||||    
T  28911249 tagttaagtttgatgaaattcaataaataagagtataataatggaaaaaaataataaatgttgcattgatattctaaatcgacaattatttt 28911340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36985861 - 36985771
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| ||||||||||||  ||  ||||||||||||||||| || || ||||||| |||||||||||||||||||| ||||||| ||||    
T  36985861 attagtatcatttactaaaatacccgtattaattgtagttagtagaataattaagttggatgaaattcaataaataagggtataatggtgg 36985771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 2653495 - 2653357
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||| |||||  |  ||||||||||||||||  ||||||||||| || ||||||||| |||||||||  |||||||| |||       ||    
T  2653495 attagtatcatttattaaaatactcttattaattgtagttaaaggagtagttaaattggatgaaatttaataaataaaggtataataatggaaaaagata 2653396  T
Q  101 ataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||| |||||||| |||| ||||||||||| ||||||    
T  2653395 ataaatgttgcattgatattctaaagtgacaactatttt 2653357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 53412183 - 53412094
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||| ||||||||||||     ||||||||| ||||| ||||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  53412183 attagtatcatttactaaaatatttttattaattatagtttgtggaatagttaagttggatgaaattcaataaataaaagtataatagtg 53412094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3689637 - 3689551
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||||||||| |  ||||||||| |||||||| |||| |||||||| ||||||||| ||| |||||| ||||||||    
T  3689637 attagtatcatttactaaaacactcttattaattatagttagttgagttgttaagttagatgaaattaaattaataagggtataata 3689551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 4972601 - 4972507
Alignment:
Q  47 gtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||        |||||||| || ||||||||||||||||||||| ||||||||||    
T  4972601 gtagttatgttagatgaaattcaataaataagtgtataatagtg-aaaaaaataataaatgttacattggtattgtaaagtgacagttattttgag 4972507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 10754423 - 10754308
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||||| || |||||||  |||||||| |||||||||||||||||| || |       |||||| | ||||||||||||| || |    
T  10754423 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttg-gaaaaataataattgttgcattggtattttaga 10754325  T
Q  126 gtgacaattattttgag 142  Q
     ||||||||||||||||    
T  10754324 ttgacaattattttgag 10754308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 10968192 - 10968077
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||||| || |||||||  |||||||| |||||||||||||||||| || |       |||||| | ||||||||||||| || |    
T  10968192 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttg-gaaaaataataattgttgcattggtattttaga 10968094  T
Q  126 gtgacaattattttgag 142  Q
     ||||||||||||||||    
T  10968093 ttgacaattattttgag 10968077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 38663493 - 38663583
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| ||||||||||||| |  |||||||| |||||||||  |||||||||||| ||||||||| |||||||| | ||| ||||||||    
T  38663493 attagtagcatttactaaaacacttttattaatcgtagttagtaaagtagttaagttggatgaaatttaataaatatgggtacaatagtgg 38663583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35998886 - 35998798
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||||||||| |||||   |||||||||||||||||  ||||||||||||||| |||| ||||||||||||||   ||||||||||    
T  35998886 attagtaacatttattaaaatatcattattaattgtagttgatggagtagttaagttggatg-aattcaataaataaagatataatagtg 35998798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 44526451 - 44526378
Alignment:
Q  4 agtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||| ||||||  | ||||||||||||||||||||| |||| ||||| ||||||||| |||||||||    
T  44526451 agtaacatttattaaaacatccttattaattgtagttagtggaatagtgaagttggatgaaatttaataaataa 44526378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 28500976 - 28501072
Alignment:
Q  48 tagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnntaataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||||||||||||||||||||||| |||||||| |||         |||||||| ||| ||||||||| ||||| |||||||||||||||    
T  28500976 tagttaagtttgatgaaattcaataaataagggtataataatgggaaaaaaaataataaatgttgtattggtattctaaagagacaattattttgag 28501072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 7987025 - 7986962
Alignment:
Q  25 attattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatag 88  Q
    |||||||||| | |||||| |||||||||||||| |||||||| ||||||||| ||||||||||    
T  7987025 attattaattattgttagtagagtagttaagtttaatgaaattaaataaataaaagtataatag 7986962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 11288700 - 11288751
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  11288700 ttattaattgtagttggtggagtagttaagttggataaaattcaataaataa 11288751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 31370373 - 31370432
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||||||  ||||||||    
T  31370373 attaattatagttagtggagtagttaagttggatgaaaatcaataaataaatgtataata 31370432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 19265858 - 19265744
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata--atagtggnnnnnnntaataaatattgcattggtattgta 123  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||| |||| || ||  ||| |||       || ||||| ||||||| ||||| ||    
T  19265858 ttattaattatagttagtggagtagttaagttgaatgaaattcaataattaagggtgtaatataatggaaaaaaatactaaatgttgcattagtattcta 19265759  T
Q  124 aagtgacaattattt 138  Q
    |||||||||||||||    
T  19265758 aagtgacaattattt 19265744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 20612226 - 20612300
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    |||||||||||| |||||||||||||||| || || |||||||||||    ||||||||||||||||| ||||||    
T  20612226 atttactaaaacaccattattaattgtagataatgaagtagttaagtgaattgaaattcaataaataatagtata 20612300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 22866991 - 22867041
Alignment:
Q  242 tttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  22866991 tttattgtggtctgcccctagtcgccttaattgcggcctttagtttgcctt 22867041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38502528 - 38502610
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtat 83  Q
    ||||||| |||||| |||||  |  ||||||||| |||||| || |||||||||||| ||| |||||||||||||||||||||    
T  38502528 attagtatcatttattaaaatacttttattaattatagttaatgtagtagttaagttggataaaattcaataaataagagtat 38502610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 50264134 - 50264212
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  |  ||||||||||||||||||| | || |||||||  ||||||||||||||||||| ||||||||    
T  50264134 catttactaaaatactcttattaattgtagttagtgaaatatttaagttgaatgaaattcaataaataagggtataata 50264212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 47359020 - 47359085
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||||| ||||||||| |||||||  ||||||||||||||||||| ||  ||||||||    
T  47359020 ttattaattgtagtcagtggagtaattaagttgaatgaaattcaataaataagggtgcaatagtgg 47359085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 49579235 - 49579363
Alignment:
Q  12 ttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgc 111  Q
    |||||||||| |  |||||||||||||||| || | | |||||||| ||||||||||||||||||||| | || ||||         ||| |||||||||    
T  49579235 ttactaaaacacttttattaattgtagttattgaaattgttaagttggatgaaattcaataaataagaatgtactagt-aaaaaaaataa-aaatattgc 49579332  T
Q  112 attggtattgtaaagtgacaattattttgag 142  Q
    |||| |||| |||||||||||||||||||||    
T  49579333 attgatattttaaagtgacaattattttgag 49579363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 10672703 - 10672643
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataat 86  Q
    ||||||||| |||| | || | |||||||||| ||||||||||||||||||||||||||||    
T  10672703 ttattaattttagtcaatgaaatagttaagttggatgaaattcaataaataagagtataat 10672643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 10886343 - 10886283
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataat 86  Q
    ||||||||| |||| | || | |||||||||| ||||||||||||||||||||||||||||    
T  10886343 ttattaattttagtcaatgaaatagttaagttggatgaaattcaataaataagagtataat 10886283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 43902301 - 43902237
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||  |||||||||||||| |||||||  ||||||||||||||||||| | |||||||||    
T  43902301 ttattaatcatagttagtggagtaattaagttgcatgaaattcaataaataagggcataatagtg 43902237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 2400844 - 2400777
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||||||||| || | ||| ||||||||| ||||||||||||||| | || |||||||||||||||    
T  2400844 atttactaaaacaccctcattgattgtagtttgtggagtagttaagtataataaaattcaataaataa 2400777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 46396963 - 46397055
Alignment:
Q  47 gtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    ||||||||||| ||| ||||||| |||||||| |||||||| |||       |||||||| ||| ||| |||| |||||||||||||||||||    
T  46396963 gtagttaagttggataaaattcattaaataagggtataataatggaaaaaactaataaatgttgtattcgtatcgtaaagtgacaattatttt 46397055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 48914219 - 48914278
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataa 85  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||| || ||||||    
T  48914219 ttattatttgtagttagtgaagtaattaagtttaatgaaattcaataaattagggtataa 48914278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 462024 - 461947
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||   | |||||||||||| |||| ||||||||||||||  || |||||||| ||||||| ||||||||    
T  462024 atttactaaaatatccttattaattgtaattagcggagtagttaagttgaataaaattcaacaaataagggtataata 461947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 23915485 - 23915555
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttga-tgaaattcaataaataagagt 81  Q
    ||||||||||||  ||||||||||| |||||||||||||||||| |  ||| |||||| ||||||||||||||    
T  23915485 atttactaaaacatcattattaattatagttagtggagtagttagg--tgattgaaatacaataaataagagt 23915555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 29295254 - 29295163
Alignment:
Q  52 taagtttgatgaaattcaataaataagagtataatagtgg----nnnnnnntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||||||||||||||||||||||| ||| |||           ||||||||| |||||||||||| |||||||| |||||||||    
T  29295254 taagtttgatgaaattcaataaataagagtattataatggaagaaaaaaaataataaatactgcattggtattctaaagtgataattatttt 29295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 30682267 - 30682328
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||| ||||||||||| |||||||||| ||  |||||||||||||||||| || ||||||    
T  30682267 ttattagttgtagttagtagagtagttaatttgaatgaaattcaataaataaaagcataata 30682328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 43967611 - 43967656
Alignment:
Q  31 aattgtagttagtggagtagttaagtttgatgaaattcaataaata 76  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||    
T  43967611 aattgtagtcagtagaatagttaagtttgatgaaattcaataaata 43967656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 21698653 - 21698693
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  21698653 taataaatattgcattgatattttaaagtgacaattatttt 21698693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 25142450 - 25142502
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||| |||| ||||||||  ||||||||||| ||||||||||||||||||||    
T  25142450 ttattgattgcagttagtgatgtagttaagttggatgaaattcaataaataag 25142502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 35251936 - 35251888
Alignment:
Q  39 ttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||| ||||||| ||||||||||||||||||||  |||||||    
T  35251936 ttagtggagtaattaagttagatgaaattcaataaataaggatataata 35251888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 16506281 - 16506332
Alignment:
Q  3 tagtaacatttactaaaactccattattaattgtagttagtggagtagttaa 54  Q
    ||||||||||||||||||| |  |||||||||||||||| ||||||| ||||    
T  16506281 tagtaacatttactaaaacacatttattaattgtagttaatggagtaattaa 16506332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 41711525 - 41711592
Alignment:
Q  24 cattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||| |||||| || |||| ||||| ||||||||| |||||||||||||||||||  || ||||||||    
T  41711525 catttttaattttatttagcggagttgttaagttttatgaaattcaataaataaggatacaatagtgg 41711592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 42517692 - 42517773
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtg---gagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  || ||||||||| |||||||||    | |||| ||||| ||||||||||||||||||| |||||||||    
T  42517692 catttactaaaatacccttattaattatagttagtgaaatactagtaaagttagatgaaattcaataaataacagtataata 42517773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 54202246 - 54202187
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataa 85  Q
    |||||||||||| |||||| |||| || |||  ||||||||||||||||||||| |||||    
T  54202246 ttattaattgtaattagtgaagtaattgagtgggatgaaattcaataaataagaatataa 54202187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 30261054 - 30260996
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    |||||||||||| ||||| ||||||||||||    ||||||||||||||||||| ||||    
T  30261054 ttattaattgtaattagtagagtagttaagtagagtgaaattcaataaataagactata 30260996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 39397411 - 39397333
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  ||  ||||||||||||||| | || |||||||  | ||||||||| |||||||||| ||||||||    
T  39397411 catttactaaaatccccatattaattgtagttactagattagttaaaatggatgaaatttaataaataagggtataata 39397333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 54921772 - 54921802
Alignment:
Q  112 attggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||||||||||||||||||||||    
T  54921772 attggtattgtaaagtgacaattattttgag 54921802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 10699504 - 10699540
Alignment:
Q  50 gttaagtttgatgaaattcaataaataagagtataat 86  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  10699504 gttaagttggatgaaatttaataaataagagtataat 10699540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 10913274 - 10913310
Alignment:
Q  50 gttaagtttgatgaaattcaataaataagagtataat 86  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  10913274 gttaagttggatgaaatttaataaataagagtataat 10913310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 20681446 - 20681406
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||| |||| |||| ||||||||||||||||||    
T  20681446 taataaatattgtattgatattttaaagtgacaattatttt 20681406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 43253903 - 43254045
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||        |    
T  43253903 attagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagtgggatgaaattcattaaataagggtataatagtggaaaaaaact 43254002  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  43254003 aataaatgttgcattggtattgtaaagtgacaattattttgag 43254045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44301637 - 44301495
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| ||||||||||||  || |||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||        |    
T  44301637 attagtatcatttactaaaatacccttatcaattgtaattagtggagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaatatt 44301538  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||||||| |||| |||||||||||||||||||||    
T  44301537 aataaatgttgcattgatattataaagtgacaattattttgag 44301495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 10366713 - 10366830
Alignment:
Q  25 attattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaa 124  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| |||       |||||||| ||||||||||||| |||    
T  10366713 attattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatgggaaaaaataataaatgttgcattggtattctaa 10366812  T
Q  125 agtgacaattattttgag 142  Q
    ||||||||||||||||||    
T  10366813 agtgacaattattttgag 10366830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 36460456 - 36460597
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||||||||| |||||     |||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||       ||    
T  36460456 attagtaacatttattaaaatattcttattaattgtagttaatggagtaattaagttggatgaaattcaataaataagggtataatagtggaaacaaata 36460555  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  36460556 ataaatattgcattgatatcgtaaagtgacaattattttgag 36460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 36476651 - 36476518
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| | |       ||||||||      
T  36476651 catttactaaaatacccttattaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtataataatagaaaaaagtaataaatgc 36476552  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  36476551 tgcattggtattctaaagtgacaattattttgag 36476518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 37312025 - 37311886
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnnt 99  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |        |    
T  37312025 attagtagcatttactaaaaaacccttattaattgtagttagtggagtagttaaatttaatgaaattcaataaataagagtataataatagaaaaataat 37311926  T
Q  100 aataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||  ||||||| |||||||||||||||||||||||    
T  37311925 aataaatgctgcattgatattgtaaagtgacaattatttt 37311886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 37695714 - 37695837
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaata 107  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||        ||||||||     
T  37695714 catttactaaaacacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaatg 37695813  T
Q  108 ttgcattggtattgtaaagtgaca 131  Q
    ||||||||||||| ||||||||||    
T  37695814 ttgcattggtattctaaagtgaca 37695837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 39043799 - 39043932
Alignment:
Q  3 tagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaat 102  Q
    ||||| ||||||||||||  || ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||        ||||    
T  39043799 tagtatcatttactaaaatacctttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtataataatg--aaaaaataat 39043896  T
Q  103 aaatattgcattggtattgtaaagtgacaattattt 138  Q
    |||| ||||||||||||| |||||||||||||||||    
T  39043897 aaatgttgcattggtattctaaagtgacaattattt 39043932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 30190700 - 30190841
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||| |||       ||    
T  30190700 attagtatcatttactaaaatacccttattaattgtagttagtggagtagttaagttggatgaaattcaattaataagggtaaaataatggaaattaata 30190799  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| || ||||  |||| |||||||||||||||||||||    
T  30190800 ataaatgttacatttttattctaaagtgacaattattttgag 30190841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19823086 - 19822945
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| || | |       ||    
T  19823086 attagtatcatttactaaaacacccttattaattgtagttagtggaatagttaagttggatgaaattcaataaataagggtatattaat-gaaaaaaata 19822988  T
Q  101 ataaatattgcattggtattgt-aaagtgacaattattttgag 142  Q
    ||||||  |||||||||||| | ||||||||||||||||||||    
T  19822987 ataaatgctgcattggtattctaaaagtgacaattattttgag 19822945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 37497567 - 37497425
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg-gnnnnnnnt 99  Q
    ||||||| ||||||||||||| || || |||| |||||||||||||||||||||||| |||||||||||||||||||  |||||||| ||         |    
T  37497567 attagtatcatttactaaaacaccgttgttaactgtagttagtggagtagttaagttggatgaaattcaataaataaacgtataataatgaaaaaataat 37497468  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||    
T  37497467 aataaatgttgtattggtattataaagtgacaattattttgag 37497425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 38137511 - 38137626
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||| |||||||||||| |||||||| || |||||||||||||||||||   |||||||||||       |||||||||||||||| |||||| |||    
T  38137511 ttattaactgtagttagtggggtagttaaattcgatgaaattcaataaataaagatataatagtggaaaataataataaatattgcattagtattgcaaa 38137610  T
Q  126 gtgacaattattttga 141  Q
    ||||||||||||||||    
T  38137611 gtgacaattattttga 38137626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11632156 - 11632067
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||  |||||||||||| || |||||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||    
T  11632156 attagtagtatttactaaaacacctttattaattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataatagtg 11632067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 30711140 - 30711059
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||||||| ||||||||||||||||||| ||||| | ||||||| ||||||||||||||||||||| ||||||||||    
T  30711140 catttactaaaacaccattattaattgtagttaatggagcaattaagttagatgaaattcaataaataagattataatagtg 30711059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 12904914 - 12904849
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  12904914 ttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataatagtgg 12904849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 38795419 - 38795278
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||  |||  || ||||||||||||||| ||||||| |||||||| ||||||||| |||||| ||| | ||||||||||        |    
T  38795419 attagtatcatttacccaaatgcccttattaattgtagttggtggagttgttaagttggatgaaatttaataaaaaagggcataatagtggaaaataaaa 38795320  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
      |||||||||||||||||| |||||||||||||||||||||    
T  38795319 taaaatattgcattggtattctaaagtgacaattattttgag 38795278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 54726552 - 54726419
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||||||||||  | |||||||||||||||| ||||||||||||||| |||||| || |||||||||| |||| ||| |||       |||||||| |    
T  54726552 catttactaaaacatctttattaattgtagttaatggagtagttaagttagatgaagtttaataaataagggtattataatgggaaaaactaataaatgt 54726453  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||| ||||||  |||||||||||||    
T  54726452 tgcattagtattctaaagttgcaattattttgag 54726419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 37773012 - 37773147
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnt--aataaat 106  Q
    ||||||||||||  || ||||||||| |||| |||||| ||||||||||  |||||||||| |||||||| |||||||| |||       |  |||||||    
T  37773012 catttactaaaatacccttattaattatagtcagtggaatagttaagttgaatgaaattcattaaataagggtataataatggaaaaaaataaaataaat 37773111  T
Q  107 attgcattggtattgtaaagtgacaattattttgag 142  Q
      ||||||||||||||||||||||||||||||||||    
T  37773112 gctgcattggtattgtaaagtgacaattattttgag 37773147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3313329 - 3313243
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||  ||| |||||||| || |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||    
T  3313329 attagtagaattaactaaaacacccttattaattgtagttaatggagtatttaagttggatgaaattcaataaataagattataata 3313243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29024006 - 29024091
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| |||||||||||||  | |||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||    
T  29024006 attagtatcatttactaaaacatc-ttattaattgtagttagtggagtaattaagttggatgaaattcaataaataatggtataata 29024091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 23004434 - 23004499
Alignment:
Q  13 tactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  23004434 tactaaaacacccttattaattgtagttagtggagtagttaagttgtatgaaattcaataaataag 23004499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 33491408 - 33491542
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaa-ttcaataaataagagtataatagtg-gnnnnnnntaataaata 107  Q
    |||||||||||| |  ||||||||| ||||||||||||||||||||||  |||||| || |||||||||| ||||||||||| |       | |||||||    
T  33491408 atttactaaaacactcttattaattatagttagtggagtagttaagttgtatgaaattttaataaataagggtataatagtgcgaaaaaaatcataaata 33491507  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
     | |||| |||||||||||||||||||||||||||    
T  33491508 ctacattagtattgtaaagtgacaattattttgag 33491542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 45710917 - 45710848
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  45710917 catttactaaaacacttttattaattgtagttagtggagtagttaagttggatgaagttcaataaataag 45710848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 51838007 - 51838141
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaata 107  Q
    ||||||||||||  || |||||| |||||| |||||||||||||| |||  |||||||||| |||||||| ||||||||||||        ||||||||     
T  51838007 catttactaaaatacccttattagttgtagctagtggagtagttacgttgaatgaaattcattaaataagggtataatagtggaaaaaaaataataaatg 51838106  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||   |||||||||||||||||||||||||    
T  51838107 ttgcattataattgtaaagtgacaattattttgag 51838141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 3901197 - 3901330
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||||||||||    |||||| ||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||| |||       |||||||| |    
T  3901197 catttactaaaacattcttattagttgtagttagtggggtacttaagttggatgaaattcaataaataagggtataataatggaaaaaaataataaatgt 3901296  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||||||||||  | ||| ||||||||||||||    
T  3901297 tacattggtattcaagagtaacaattattttgag 3901330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11905897 - 11905821
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||| ||||||||||| | || |||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  11905897 attagtatcatttactaaagcacccttattaattgtagttaatggagttgttaagttggatgaaattcaataaataa 11905821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 27471402 - 27471269
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| |  ||||||||| ||  ||||||||||||||||||  ||||||||||||||||||  ||||  ||||||       ||||||||      
T  27471402 catttactaaaacactcttattaattataagtagtggagtagttaagttgaatgaaattcaataaataaaggtatggtagtggacaaaaataataaatgc 27471303  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    || ||||||||| |||||||||||||||||||||    
T  27471302 tgtattggtattataaagtgacaattattttgag 27471269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 1778710 - 1778632
Alignment:
Q  8 acatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||||  | |||||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  1778710 acatttactaaaacatccttatta-ttgtagttagtggagtagataagttggatgaaattcaataaataagggtataata 1778632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 19611975 - 19611908
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||||||||   | ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19611975 atttactaaaatatccttattaattgttgttagtggagtagttaagtttgatgaaattcaataaataa 19611908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8679094 - 8679184
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| ||||||||||||   | ||||||||| ||||||||| | || ||||||| |||||||||||||||||||| ||||||||||||    
T  8679094 attagtagcatttactaaaagatccttattaattatagttagtgaattaattaagttggatgaaattcaataaataagggtataatagtgg 8679184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12736612 - 12736701
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||| ||||||||| ||  || |||||||||||| |||||| ||||||||| || ||| |||||||||||||||| |||||||||||    
T  12736612 attagtatcatttactacaatacccttattaattgtacttagtgtagtagttaatttggataaaattcaataaataagggtataatagtg 12736701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 17652816 - 17652687
Alignment:
Q  12 ttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgc 111  Q
    ||||||||||  | |||||||||||||||||||  ||||||||||| ||||||||| |||||||||| |||||||| | |       | ||||||| |||    
T  17652816 ttactaaaacatccttattaattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataataattgaaaaaatt-ataaatactgc 17652718  T
Q  112 attggtattgtaaagtgacaattattttgag 142  Q
    |||  |||| |||||||||||||||||||||    
T  17652717 attaatattctaaagtgacaattattttgag 17652687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 38705225 - 38705168
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtat 83  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  38705225 ttattaattgtagttagttgagtaattaagttagatgaaattcaataaataagagtat 38705168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34750571 - 34750483
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||| |||||||||||||  | ||||||||||||||| ||||||||||||| || ||||||| | |||||||||  ||||||||||    
T  34750571 attagtatcatttactaaaacatccttattaattgtagttggtggagtagttaacttggatgaaaattaataaataatggtataatagt 34750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 49447856 - 49447919
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||||||||||||| || ||||||| |||||||||||| |||||||||| ||||||||||    
T  49447856 ttattaattgtagttagtagaatagttaaatttgatgaaatttaataaataagggtataatagt 49447919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 5322985 - 5323063
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||  |  ||||||||| || |||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  5322985 catttactaaaatacacttattaattataattagtaaagtagttaagtttgatgaaattcaataaataagggtataata 5323063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 27549333 - 27549464
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnntaataaata 107  Q
    |||||||||||||  |||||||| || |||||||||| |||||||| ||  || |||||||||||||||   ||||||||| ||       ||||||||     
T  27549333 catttactaaaacaacattattagttatagttagtggcgtagttaaattaaattaaattcaataaataaagttataatagtgggaaaaaaataataaatg 27549432  T
Q  108 ttgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||| ||||||||||||||| |||||||    
T  27549433 ttgcattgatattgtaaagtgacagttatttt 27549464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 24569149 - 24569214
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaat 75  Q
    |||||||||||  || ||||||||||||||||||||||||||||||||  |||||||||| |||||    
T  24569149 atttactaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaat 24569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 31158598 - 31158691
Alignment:
Q  48 tagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||| |||||||||||||||||||  |||||||||||        ||||||||| |||||| |||||||||||||| ||||||||||||    
T  31158598 tagttaagttagatgaaattcaataaataatggtataatagtg-aaaaaaataataaatactgcatttgtattgtaaagtgagaattattttgag 31158691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 53560284 - 53560150
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnt-aataaata 107  Q
    ||||||||||||| || ||||||| | |||||||| |||||||||||||  ||||| ||||||||||||| || | ||| |||       | |||||||     
T  53560284 catttactaaaacacccttattaaatatagttagtagagtagttaagttgaatgaagttcaataaataagggtgttataatggaaaaaaataaataaatg 53560185  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
     |||||| ||||| |||||||||||||||||||||    
T  53560184 ctgcattagtattctaaagtgacaattattttgag 53560150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 41038458 - 41038571
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||| || |||||||||||| | |||| |||||||||||||  ||| ||| |||       ||||||||  |||||| ||||| ||||    
T  41038458 ttattaattgtagttaatgaagtagttaagttggttgaagttcaataaataaggatattataatggaaaaaaataataaatgctgcatttgtattttaaa 41038557  T
Q  126 gtgacaattatttt 139  Q
    ||||||||||||||    
T  41038558 gtgacaattatttt 41038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 23068248 - 23068137
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||| ||| | || ||||||| ||||||||||||||||||| ||||||||| | |       |||||||| ||| |||| |||||||||    
T  23068248 ttattaattgtagtttgtgaaatatttaagttagatgaaattcaataaataaaagtataataat-gacaaaaataataaatgttgtattgatattgtaaa 23068150  T
Q  126 gtgacaattattt 138  Q
    || ||||||||||    
T  23068149 gtaacaattattt 23068137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 34957553 - 34957438
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||| ||||||||||||||||| ||||  |||||||||||||||||||  |||| ||  ||       |||||||| || |||||||||| ||||    
T  34957553 ttattaattatagttagtggagtagttcagttaaatgaaattcaataaataaggatatagtaacgg-aaaaaataataaatgttacattggtattttaaa 34957455  T
Q  126 gtgacaattattttgag 142  Q
    |||| ||||||||||||    
T  34957454 gtgataattattttgag 34957438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 19609349 - 19609288
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||| |||| ||||||||||||| |||||||||| |||||||||||||||  ||||||||    
T  19609349 ttattacttgttgttagtggagtagataagtttgataaaattcaataaataaatgtataata 19609288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 28690830 - 28690907
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataat 86  Q
    ||||||||||||   | |||||||||||||||||||   |||||||||| |||||||||||||||||||  |||||||    
T  28690830 catttactaaaatatctttattaattgtagttagtgagatagttaagttggatgaaattcaataaataaatgtataat 28690907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 52290968 - 52290891
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||| |||||| ||||||  | ||||||||| ||||||||||||||||||||||  || || |||||||||||||    
T  52290968 attagtaccatttattaaaacagccttattaattatagttagtggagtagttaagttgaataaagttcaataaataag 52290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 40462366 - 40462255
Alignment:
Q  29 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtg 128  Q
    ||||||||||||||  ||||||||||||| ||| ||||||||||||||   ||||||||||||        ||||||| ||||||||  ||| |||||||    
T  40462366 ttaattgtagttagaagagtagttaagttggataaaattcaataaatagttgtataatagtgggaaaaa--aataaatgttgcattgacattctaaagtg 40462269  T
Q  129 acaattattttgag 142  Q
    |||| |||||||||    
T  40462268 acaactattttgag 40462255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 41351629 - 41351680
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||  ||||||||||||||||||||||  ||||||||||||||||||    
T  41351629 ttattaatgatagttagtggagtagttaagttgaatgaaattcaataaataa 41351680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 14194630 - 14194545
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||||||||  |  |||| |||||| |||||||||||| ||||||| ||||||||||||| |||||  ||||||||    
T  14194630 attagtaccatttactaaaatacttttatgaattgt-gttagtggagtaattaagttggatgaaattcaattaataaaggtataata 14194545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 30682131 - 30682188
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtat 83  Q
    |||||||||||||||| |||| || ||||||| || |||||||||||||||| |||||    
T  30682131 ttattaattgtagttaatggaataattaagttggacgaaattcaataaataatagtat 30682188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 40194553 - 40194488
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||||||||||| |||||| |||| || |||||| |||||||||   |||||||||||    
T  40194553 ttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtgg 40194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 43719317 - 43719272
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaat 71  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||    
T  43719317 ttattaattgtagttagtggagtagttaaattggatggaattcaat 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 50036510 - 50036559
Alignment:
Q  39 ttagtggagtagttaagtttgatgaaattcaataaataagagtataatag 88  Q
    ||||| || ||||||||||||||||||||||||||||||  |||||||||    
T  50036510 ttagttgaatagttaagtttgatgaaattcaataaataaaggtataatag 50036559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 24703692 - 24703599
Alignment:
Q  46 agtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||| |||||||||||||||||||   |||||||||||       ||| ||||||| |||||| | | |||| |||||||||||||    
T  24703692 agtagttaagttggatgaaattcaataaataaagatataatagtggaaagaaataacaaatattacattggcactttaaaatgacaattatttt 24703599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 36462994 - 36463062
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||   | ||||||||||| ||| |||||||| ||||||| ||||||||| |||||||||    
T  36462994 catttactaaaataaccttattaattgttgtttgtggagtaattaagttggatgaaattaaataaataa 36463062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 38512075 - 38512011
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||| |||||| ||| |||||||||||||||||||| |||| || ||||||| ||||| |||||    
T  38512075 ttattgattgtaattattggagtagttaagtttgatggaatttaaaaaataagggtatagtagtg 38512011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 1018922 - 1018989
Alignment:
Q  24 cattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||| ||||||||||||||||| |||   ||| || |||||||||| |||||| ||||||    
T  1018922 cattattaattgcagttagtggagtagttaggttgcttgagatacaataaataaaagtatattagtgg 1018989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 3985645 - 3985684
Alignment:
Q  253 ccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  3985645 ccgcccctagtcgccttaattgcggcctttggtttgcctt 3985684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 30710626 - 30710583
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||| |||||||| |||| |||||||||||||||||||||    
T  30710626 taataaatgttgcattgatattctaaagtgacaattattttgag 30710583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 37804898 - 37804839
Alignment:
Q  13 tactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaata 72  Q
    ||||||||  || ||||||||| | ||||||||||||||||||||| |||||||| ||||    
T  37804898 tactaaaatacccttattaattatggttagtggagtagttaagttttatgaaattaaata 37804839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 41380614 - 41380681
Alignment:
Q  225 ctgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    ||||||||| |||| | || |||| |||||||||||||||| |||||||||| ||||| ||| |||||    
T  41380614 ctgttggaaattccgccttaattgcggcccgcccctagtcgccttaattgcgacctttggttagcctt 41380681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 45710822 - 45710783
Alignment:
Q  103 aaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  45710822 aaatattgtattggtattataaagtgacaattattttgag 45710783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 14170212 - 14170146
Alignment:
Q  226 tgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||||||| |||| | ||||||| ||||||||||||| || || ||||||||| ||| |||||||||    
T  14170212 tgttggaagttccgcctttattgcggcccgcccctagccgcctaaattgcggcatttggtttgcctt 14170146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 141
Target Start/End: Original strand, 24569246 - 24569276
Alignment:
Q  111 cattggtattgtaaagtgacaattattttga 141  Q
    |||||||||||||||||||||||||||||||    
T  24569246 cattggtattgtaaagtgacaattattttga 24569276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 26467161 - 26467108
Alignment:
Q  26 ttattaattgtagttag--tggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||||||   || |||||||||||| |||||||||||||||||||    
T  26467161 ttattaattgtagttataatgaagtagttaagttagatgaaattcaataaataa 26467108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 24245157 - 24245221
Alignment:
Q  25 attattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||||||||| |||||  ||||||||| |  |||| |||||||||||||| | |||||||||    
T  24245157 attattaattgtacttagtaaagtagttaaatcggatgcaattcaataaataataatataatagt 24245221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 48541065 - 48541109
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaa 70  Q
    |||||||||||| ||||| |||||||||||||  |||||||||||    
T  48541065 ttattaattgtaattagttgagtagttaagttgaatgaaattcaa 48541109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 54477524 - 54477564
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaat 66  Q
    |||||||||||||||| |||||||||||||||  |||||||    
T  54477524 ttattaattgtagttaatggagtagttaagttgaatgaaat 54477564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 44761535 - 44761674
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||       ||    
T  44761535 attagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataatagtggaaaaaacta 44761634  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||  ||  ||||||||||||||||||||||||||||||||||    
T  44761635 at--atgctgcattggtattgtaaagtgacaattattttgag 44761674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 9300162 - 9300297
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt--ggnnnnnnntaataaat 106  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||  |||||||||||||||||||  |||||||||  ||       ||||||||    
T  9300162 catttactaaaacacccttattaattttagttagtggagtagttaagttgaatgaaattcaataaataaggatataatagtggggaaagaaataataaat 9300261  T
Q  107 attgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||||||||||||||||||||||||||||||||||    
T  9300262 actgcattggtattgtaaagtgacaattattttgag 9300297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 13335291 - 13335151
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||| |||||| |  |||||||||| ||||||| ||||||||||||||||||||||||||||||| || |||||||| |||       ||    
T  13335291 attagtatcatttagtaaaacacatttattaattgcagttagtagagtagttaagtttgatgaaattcaataaatcagggtataataatgg-aaaaaata 13335193  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  13335192 ataaatgttgcattggtattctaaagtgacaattattttgag 13335151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 39482690 - 39482546
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagt---ataatagtggnnnnnn 97  Q
    |||||||  |||||||||||| || ||||||||| ||||||||||| |||||||||   ||||||||||||||||||| ||   ||||||||||          
T  39482690 attagtagaatttactaaaacacccttattaattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataatagtgggaaaaa 39482591  T
Q  98 ntaataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
     ||||||||| ||||||||||||||||||||||||||||||||||    
T  39482590 ataataaatactgcattggtattgtaaagtgacaattattttgag 39482546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 22771884 - 22772017
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||| |||||| || ||||||||||||||||||| |||| ||| ||| |||||||||||||||||||| |||||||| ||        |||||||| |    
T  22771884 catttattaaaacacccttattaattgtagttagtgaagtaattatgttggatgaaattcaataaataagggtataataatgaaaagtaataataaatgt 22771983  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  22771984 tgcattggtattctaaagtgacaattattttgag 22772017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 21216150 - 21216330
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnt-aataaata 107  Q
    |||||||||||||  | |||||||||||||||||||||||||||||||| |||||||||||||||  ||  |||||||||| |       | |||||||     
T  21216150 catttactaaaacatccttattaattgtagttagtggagtagttaagttggatgaaattcaataa--aatggtataatagtagaaaaaaataaataaatg 21216247  T
Q  108 ttgcattggtattgtaaagtgacaattattttgagnnnnnnnnnnnntgctaaagaaacaataattgtgagacgaatggagta 190  Q
    |||||||||||||||||||||||||||||||| ||            ||||||||| |||||||||||||||| |||||||||    
T  21216248 ttgcattggtattgtaaagtgacaattattttcagaaaaagaaaaaatgctaaagagacaataattgtgagacaaatggagta 21216330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 10179988 - 10180126
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||  |||||||||||  |  ||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||| | |       ||    
T  10179988 attagtataatttactaaaatacacttattaattgtagttagtggagtagttaagttgaatgaaattcaattaataagtgtataataatagaaaataata 10180087  T
Q  101 ataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  10180088 ataaatgttgcattggtattctaaagtgacaattatttt 10180126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34948728 - 34948867
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||  |||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | | |       ||    
T  34948728 attagtatcatttacagaaacacatttattaattgtagttagtggagtagttaagttggatgaaattcaataaataag-gtataacaat-gaaaaaaata 34948825  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  34948826 ataaatattgcattggtattctaaagtaacaattattttgag 34948867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 45425707 - 45425848
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    |||| ||||||||| ||||||    |||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||        |    
T  45425707 attaataacatttattaaaacattcttattaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataatagtggaaaaaaaat 45425806  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||| || ||||| |||||||||||||||||||||||||    
T  45425807 aataaatgttacattgatattgtaaagtgacaattattttga 45425848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 4428400 - 4428531
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  | |||||||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||||||||       |||||| | |    
T  4428400 catttactaaaatacaattattaattgtagttagtgaattagttaagttagatgaaattcaataaataaaagtataatagtgg--aaaaataataattgt 4428497  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    | ||||| |||| |||||||||||||||||||||    
T  4428498 tacattgatattctaaagtgacaattattttgag 4428531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 17719308 - 17719436
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatatt 109  Q
    |||||||||||   | ||||||||| |||||||||||||||||||||| ||||||||| |||||||||  |||||||| |||       |||||||| ||    
T  17719308 atttactaaaatatccttattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataataatggaaaaagataataaatgtt 17719407  T
Q  110 gcattggtattgtaaagtgacaattattt 138  Q
    ||||||||||| |||||||||||||||||    
T  17719408 gcattggtattctaaagtgacaattattt 17719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17823996 - 17823856
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| | ||||||| ||  || ||||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||       ||    
T  17823996 attagtatcttttactagaatacctttattaattgtagttagtgaagtagttaagttggatgaaattaaataaataatagtataatagtgg-aggaaata 17823898  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||| |||| |||| |||| ||||||||||||||||    
T  17823897 ataaatattgtattgttattataaattgacaattattttgag 17823856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 11976980 - 11977115
Alignment:
Q  4 agtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaata 103  Q
    |||| ||||||||||||  || |||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||||||||| ||       |||||    
T  11976980 agtagcatttactaaaatacccttattaattgtagttagtagagtagttaagttagatgaaattcaataaataaaggtataatagcggaaaaaaataata 11977079  T
Q  104 aatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||  | |||| |||||||||| |||||||||||||    
T  11977080 aatgctacattagtattgtaaaatgacaattatttt 11977115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 31231797 - 31231667
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||||| |||| || |||||||||||||||||||||||||||||||| ||| || ||||||||||||| |||| ||| |||       ||||||||      
T  31231797 catttactgaaacacccttattaattgtagttagtggagtagttaagttggataaagttcaataaataagggtattataatggaaaaaaataataaatga 31231698  T
Q  109 tgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||| |||| |||||||||||||    
T  31231697 tgcattggtattataaaatgacaattatttt 31231667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42887075 - 42886990
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataat 86  Q
    ||||||| ||||||||||||  || |||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  42887075 attagtatcatttactaaaatacctttattaattgtagttagtggcgtagttaagttggataaaattcaataaataagagtataat 42886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 5053202 - 5053334
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||||||||||    ||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||| |||        ||||||| |    
T  5053202 catttactaaaacagtcttattaattgtagttagcggagtagttaaattggatgagattcaataaataagagtataataatggggaaaaa-aataaatgt 5053300  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||| |||||||||||||||||||||    
T  5053301 tgcattgatattttaaagtgacaattattttgag 5053334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 32678475 - 32678392
Alignment:
Q  4 agtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||| |||||||||||||  | |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  32678475 agtatcatttactaaaacatccttattaattgtagttagtggagtagttaagttggatgaaattaaataaataagaatataata 32678392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 10953787 - 10953914
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || |||||||||||   |||||||||||||||||| ||| |||||||||| ||||| |||||||| ||        |||||||| |    
T  10953787 catttactaaaacacccttattaattgt---tagtggagtagttaagttagatcaaattcaatatataagggtataataatg---aaaaataataaatgt 10953880  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||| ||||||||||||||||||||||    
T  10953881 tgcattggtatcgtaaagtgacaattattttgag 10953914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 10961792 - 10961919
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || |||||||||||   |||||||||||||||||| ||| |||||||||| ||||| |||||||| ||        |||||||| |    
T  10961792 catttactaaaacacccttattaattgt---tagtggagtagttaagttagatcaaattcaatatataagggtataataatg---aaaaataataaatgt 10961885  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||| ||||||||||||||||||||||    
T  10961886 tgcattggtatcgtaaagtgacaattattttgag 10961919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 29226594 - 29226708
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| | |       ||||||||  ||||||| |||| ||||    
T  29226594 ttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtacaataat-gaaaaatataataaatgctgcattgatattttaaa 29226692  T
Q  126 gtgacaattattttga 141  Q
    ||||||||||||||||    
T  29226693 gtgacaattattttga 29226708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 14854983 - 14855115
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnntaataaat 106  Q
    ||||| ||||||| || |||||||||||||||||||||||||||| | |  ||||||||||||||| ||  ||||||||||||         ||||||||    
T  14854983 catttgctaaaacacctttattaattgtagttagtggagtagttaggctgaatgaaattcaataaagaatggtataatagtggaaaaaaaaataataaat 14855082  T
Q  107 attgcattggtattgtaaagtgacaattatttt 139  Q
    ||||||||  |||||||||||||||||||||||    
T  14855083 attgcattaatattgtaaagtgacaattatttt 14855115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 26626178 - 26626294
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||||||||||   |||  ||||||||||||||||||| |||||||| |||       ||||||||  ||||||| |||| ||||    
T  26626178 ttattaattgtagttagtggagtagtccggttgaatgaaattcaataaataagggtataataatgggaaaaaataataaatgctgcattgatattttaaa 26626277  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  26626278 gtgacaattattttgag 26626294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 36006954 - 36007017
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  36006954 tattaattgtagttagtggggtaattaagtttgatgaaattcaataaataagagcataatagtg 36007017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7172989 - 7172899
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| |||||||||||||    |||||||||||||||| || ||||||||||||  ||||||||||||||||||| ||||||||||||    
T  7172989 attagtagcatttactaaaacatatttattaattgtagttaatgaagtagttaagttgaatgaaattcaataaataagggtataatagtgg 7172899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 31082685 - 31082608
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||| |||||||||  ||||||||    
T  31082685 atttactaaaacacccttattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataata 31082608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 10098040 - 10098108
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  10098040 catttactataacacccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataa 10098108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 32476354 - 32476278
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataa 85  Q
    |||||| |||||  || |||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  32476354 catttattaaaatacccttattaattgtagttaatgaagtagttaagtttgatgaaattcaataaataagggtataa 32476278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 34393995 - 34394137
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagtta----gtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnn 96  Q
    |||||||  |||||||||||| || ||||||||| ||||||    |||||||||||||||| ||| || ||||||||||||||||||  || |||         
T  34393995 attagtataatttactaaaacacctttattaattatagttaactagtggagtagttaagttggataaagttcaataaataagagtattgtaatggaaaaa 34394094  T
Q  97 nntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
      ||||||||  |||||||||||| ||||||||||||||||||    
T  34394095 gttaataaattatgcattggtattttaaagtgacaattatttt 34394137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 39405837 - 39405697
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||| ||   | |||||||||  ||||||||||||| |||||||  |||||||| |||||||||| |||||||||||        ||    
T  39405837 attagtatcatttactataatatctttattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataata 39405738  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||  ||||||| |||| ||||||||||||||||||||    
T  39405737 ataaatgctgcattgatattctaaagtgacaattattttga 39405697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 396652 - 396790
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||| ||   | |||||||||||||||| || ||||||||  || ||| ||||||||| |||||| |||||||| ||        ||    
T  396652 attagtatcatttactacaatatccttattaattgtagttaatgaagtagttatattggataaaattcaattaataagggtataataatgaaaaataata 396751  T
Q  101 ataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  396752 ataaatgttgcattggtattctaaagtgacaattatttt 396790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 40996414 - 40996483
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||||||| || ||||||||||||||||||| | | |||||||| ||||||||||||||||||||    
T  40996414 catttactaaaacacccttattaattgtagttagtgaaatggttaagttggatgaaattcaataaataag 40996483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 1875831 - 1875916
Alignment:
Q  52 taagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattatt 137  Q
    ||||||| |||||||| |||||||||| ||||| ||||||       |||||||| ||||||||||||||||||||||||||||||    
T  1875831 taagttttatgaaatttaataaataagggtatactagtggaaaaaagtaataaatgttgcattggtattgtaaagtgacaattatt 1875916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 35732170 - 35732110
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  35732170 tattaattgtaattagtggagtagtaaagttagatgaaattcaatatataagagtataata 35732110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 39301022 - 39301138
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||||||| ||||||||| |||       |||||||   | ||||| |||| ||||    
T  39301022 ttattaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataataatggaaaataataataaacgattcattgatattctaaa 39301121  T
Q  126 gtgacaattattttgag 142  Q
     ||||||||||||||||    
T  39301122 atgacaattattttgag 39301138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 31271071 - 31271013
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  31271071 ttattaattatagttagtggagtagttaagttggataaaattcaataaataagggtata 31271013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 1739593 - 1739529
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||||||||||||  ||||||||| |||||||||||| |||||||||| |||||| ||||    
T  1739593 ttattaattgtagttagttaagtagttaattttgatgaaatttaataaataagggtataaaagtg 1739529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 35504937 - 35505001
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||||||||||| | || ||||||| || ||| ||||||||||||||||||||||||||||    
T  35504937 ttattaattgtagttaatagaatagttaaattcgataaaattcaataaataagagtataatagtg 35505001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 27294125 - 27294176
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  27294125 ttattaattgcagttagtggagtaattaagttggatgaaattcaataaataa 27294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 39466078 - 39466219
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagtt-aagtttgatgaaattcaataaataagagtataatagtggnnnnnnnt 99  Q
    ||||||| ||||||||||||   | |||||||| || ||||||| ||||||| || || ||| ||||||||||||||||  ||||||||| |       |    
T  39466078 attagtatcatttactaaaatatctttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataaggatataatagt-gaaaaaaat 39466176  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||| || ||||||||||||||| ||||||||||||    
T  39466177 aataaatgttgtatcggtattgtaaagtgataattattttgag 39466219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 43719300 - 43719365
Alignment:
Q  24 cattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||||||| |||||||| || || ||||||| |||||||||||||||||||  ||||||||||    
T  43719300 cattattaattatagttagttgaataattaagttggatgaaattcaataaataaaggtataatagt 43719365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2767332 - 2767475
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggag------tagttaagtttgatgaaattcaataaataagagtataatagtggnnn 94  Q
    ||||||| |||||| ||||||  | |||||| |||||||||||||||      |||||||||| ||| || ||||||||||||| |||| ||| |||       
T  2767332 attagtatcatttattaaaacatccttattatttgtagttagtggaggatgagtagttaagttggattaagttcaataaataagggtattatattggaaa 2767431  T
Q  95 nnnntaataaatattgcattggtattgtaaagtgacaattattt 138  Q
        |||||||| ||| ||| ||||| |||||||||||||||||    
T  2767432 aaagtaataaatgttgtattagtattctaaagtgacaattattt 2767475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4924108 - 4924197
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||  |||||||||||   | |||||||||||||||| | |||||||||||||  |||||| | |||||||||| ||||| |||||    
T  4924108 attagtattatttactaaaatatctttattaattgtagttaatagagtagttaagttgaatgaaacttaataaataagggtatattagtg 4924197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 5356650 - 5356597
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataaga 79  Q
    |||||||||||||||| |||| || ||||||| |||||||||||||||| ||||    
T  5356650 ttattaattgtagttaatggaataattaagttggatgaaattcaataaaaaaga 5356597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1875633 - 1875685
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagtta 53  Q
    ||||||| ||||||||||||| || ||||||||||||||||||| | ||||||    
T  1875633 attagtagcatttactaaaacacccttattaattgtagttagtgaaatagtta 1875685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 3184121 - 3184050
Alignment:
Q  221 gtttctgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||| ||||| || |||| | ||||||| || ||||||||||||| || ||||||||||||| |||||||||    
T  3184121 gtttttgttgtaaattccgcctttattgcggtccgcccctagtcgcctaaattgcggcctttggtttgcctt 3184050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 12559613 - 12559562
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||||||||| | |||| |||||||||||| || |||||||||    
T  12559613 ttattaattgtagttagtgaactagtcaagtttgatgaatttaaataaataa 12559562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 31331474 - 31331419
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaa 65  Q
    |||||||||||   ||||||||||||||||||||| |||| ||||||| |||||||    
T  31331474 atttactaaaatatcattattaattgtagttagtgaagtaattaagttggatgaaa 31331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 40028552 - 40028501
Alignment:
Q  36 tagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||| |||| ||||||| |||||||||||||||| |||| |||||||    
T  40028552 tagttagtgaagtaattaagttagatgaaattcaataaacaagaatataata 40028501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 22277431 - 22277481
Alignment:
Q  242 tttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    ||||||| || ||||||||||||| || |||||| ||||||||||||||||    
T  22277431 tttattgcggtccgcccctagtcgcctaaattgcagcctttagtttgcctt 22277481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 40996501 - 40996543
Alignment:
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||| ||| ||||||||||||| |||||||||||||||||||||    
T  40996501 aatgaatgttgcattggtattctaaagtgacaattattttgag 40996543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 6796394 - 6796423
Alignment:
Q  25 attattaattgtagttagtggagtagttaa 54  Q
    ||||||||||||||||||||||||||||||    
T  6796394 attattaattgtagttagtggagtagttaa 6796423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 32476255 - 32476222
Alignment:
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  32476255 tgcattggtattctaaagtgacaattattttgag 32476222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 42972559 - 42972630
Alignment:
Q  11 tttactaaaactccattattaattgtagttagtgga---gtagttaagtttgatgaaattcaataaataaga 79  Q
    ||||||||||  || ||||||||| |||||||||||   |||||||||||  ||||||||||||||| ||||    
T  42972559 tttactaaaatacccttattaattatagttagtggagacgtagttaagttgaatgaaattcaataaacaaga 42972630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 135716 - 135760
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagtta 53  Q
    ||||| ||||||| | |||||||||| ||||||||||||||||||    
T  135716 catttgctaaaacactattattaattatagttagtggagtagtta 135760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 15675413 - 15675373
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||| ||||||||| |||||||||| |||||||    
T  15675413 taataaatattgtattggtattctaaagtgacagttatttt 15675373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 34057691 - 34057731
Alignment:
Q  33 ttgtagttagtggagtagttaagtttgatgaaattcaataa 73  Q
    |||||||||||| | |||||||||| |||||||||||||||    
T  34057691 ttgtagttagtgaaatagttaagttggatgaaattcaataa 34057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 40109727 - 40109647
Alignment:
Q  61 tgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||||||||||| |||| ||||||       |||||||| |||||||  |||| |||| ||||||||||||||||    
T  40109727 tgaaattcaataaataagaatatattagtggaaaaatataataaatgttgcatt-atattctaaaatgacaattattttgag 40109647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 41092044 - 41091981
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||||||||||||   | || |||||||| ||| ||||||||||||||| |||||||||||    
T  41092044 ttattaattgtagttagaaaaatatttaagttt-atgtaattcaataaataagggtataatagtg 41091981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 9e-36; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 181631 - 181491
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||  ||||||||||||  ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||        ||    
T  181631 attagtagtatttactaaaacatcattattaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtgaaaaataata 181532  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  181531 ataaatgttgcatt-gtattgtaaagtgacaattattttgag 181491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 11655993 - 11656127
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnntaataaata 107  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| | ||       ||||||||     
T  11655993 catttactaaaacacccttattaattgtagttagtggagtagtaaagttggatgaaattcaataaataagggtataataatgggaaaaaaataataaatg 11656092  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
     ||||||| |||| |||||||||||||||||||||    
T  11656093 ctgcattgatattctaaagtgacaattattttgag 11656127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30716975 - 30716833
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| |||||||| |||| || |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||| |||        |    
T  30716975 attagtatcatttacttaaacacccttattaattgtagttagtggagtagtaaagttggataaaattcaataaataagagtattataatggaaaaaaaat 30716876  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||    
T  30716875 aataaatgttgcactggtattctaaagtgacaattattttgag 30716833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 31894249 - 31894387
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||||||||||  ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||        ||    
T  31894249 attagtagcatttactaaaacgtcattattaattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataatagtg--aaaaaata 31894346  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||| ||||||||| ||||| ||||||||||    
T  31894347 ataaatgttgcattgatattgtaaa-tgacatttattttgag 31894387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 6801998 - 6801864
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaata 107  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||| ||||||||| |||| ||| |||        ||||||||     
T  6801998 catttactaaaacgcccttattaattgtagttagtggagtagttaagttggatgaagttcgataaataagggtattataatggaaaaaaaataataaatg 6801899  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||| |||| |||||||||||||||||||||    
T  6801898 ttgcattgatattataaagtgacaattattttgag 6801864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 29363379 - 29363238
Alignment:
Q  3 tagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnnta 100  Q
    ||||| |||||||||||||  | ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| |||         ||    
T  29363379 tagtatcatttactaaaacatccttattaattgtagttagcggattagttaagttggatgaaattcaataaataagagtataataatggaaaaaataata 29363280  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||||||||| | |||||||||||||||||||    
T  29363279 ataaatgctgcattggtattctgaagtgacaattattttgag 29363238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 23142734 - 23142602
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||| | |||||||||||||||| ||| |||||||| |||         |||||| |    
T  23142734 catttactaaaacacccttattaattgtaggtagtggagtagttaagctagatgaaattcaataaagaag-gtataataatgggaaaaaacgataaatgt 23142636  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||||||||||||||||||||||||||    
T  23142635 tgcattgatattgtaaagtgacaattattttgag 23142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 34657626 - 34657745
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg---nnnnnnntaataaatattgcattggtattgt 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||          ||||||||  ||||| ||||||||    
T  34657626 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaatgtataatagtggaaaaaaaatataataaattctgcataggtattgt 34657725  T
Q  123 aaagtgacaattattttgag 142  Q
    ||||||||||||||||||||    
T  34657726 aaagtgacaattattttgag 34657745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 3720305 - 3720421
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||||||        |||||||  |||||||| ||||||||    
T  3720305 ttattaattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataatagtgggggggaaaaataaatgatgcattggcattgtaaa 3720404  T
Q  126 gtgacaattattttgag 142  Q
     ||||||||||||||||    
T  3720405 ttgacaattattttgag 3720421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13909499 - 13909413
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||| |||||||||||||  || |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  13909499 attagtgacatttactaaaatacccttattaattgtagttagtggagtaattaagttagatgaaattgaataaataagagtataata 13909413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 24983496 - 24983578
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||||||    
T  24983496 catttactaaaacacccttattaattgtagttagtggagtagttaagttgggtgaaattcaataaataagggtatattagtgg 24983578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 15058184 - 15058055
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  || ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||         |||||||| |    
T  15058184 catttactaaaatacccttattaattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtataatagt-acaaaaaataataaatgt 15058086  T
Q  109 tgcattggtattgtaaagtgacaattatttt 139  Q
    ||||| |||||| ||||||||||||||||||    
T  15058085 tgcatcggtattataaagtgacaattatttt 15058055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 1781877 - 1781739
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||  ||||||||||||||| ||| ||||||||||||        |    
T  1781877 attagtagcatttactaaaacacccttattaattgtagttagtggagt-gttaagttgaatgaaattcaataaaaaag-gtataatagtgggaagaaa-a 1781781  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    | |||| ||||| || ||||||||||||||||||||||||||    
T  1781780 aaaaatgttgcaatgatattgtaaagtgacaattattttgag 1781739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 21010252 - 21010105
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagtta----gtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnn 94  Q
    ||||||| ||||||||||||| || |||| |||||||||||    |||||||||||||||| ||||||||||||||||||| ||||||||| |||         
T  21010252 attagtatcatttactaaaacacccttataaattgtagttaattagtggagtagttaagttggatgaaattcaataaataacagtataataatggaaaaa 21010153  T
Q  95 nnnntaataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
        | ||||||  |||||||||||| |||||||||||||||||||||    
T  21010152 aaaattataaatgctgcattggtattataaagtgacaattattttgag 21010105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 5302401 - 5302285
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||||| | |||| ||| |||       ||||||||  |||||| ||||| ||||    
T  5302401 ttattaattgtagttaatggagtagttaagttggatgaagttcaataaatacgggtattataatggaaaaaaataataaatgctgcattagtattctaaa 5302302  T
Q  126 gtgacaattattttgag 142  Q
    |||||||||||||||||    
T  5302301 gtgacaattattttgag 5302285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3291807 - 3291891
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataa 85  Q
    |||||||  |||||||||||  || ||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||    
T  3291807 attagtattatttactaaaatacctttattaattgtagttagtgaagtagttaagttggataaaattcaataaataagtgtataa 3291891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11143626 - 11143766
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||| | || ||||||||| ||||||||| |||||||||||| |||||| ||||||||||||| |||| ||| | |       ||    
T  11143626 attagtatcatttactaaatcacccttattaattatagttagtgaagtagttaagttggatgaagttcaataaataagggtattataat-gaaaaaaata 11143724  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||||||| | ||||||||||||| |||||||    
T  11143725 ataaatgctgcattggtagtctaaagtgacaatttttttgag 11143766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 13087597 - 13087519
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||||  | ||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||| |||||||    
T  13087597 catttactaaaacatccttattaattatagttagtgaagtaattaagttggatgaaattcaataaataagaatataata 13087519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 15046171 - 15046111
Alignment:
Q  28 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  15046171 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 15046111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 32440684 - 32440827
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||  |||||||||||| || |||||||||||| ||||| ||||||||||||| ||||||||  |||||||||  ||| |||| |||       ||    
T  32440684 attagtattatttactaaaacacccttattaattgtaattagtagagtagttaagttggatgaaatgtaataaataaaggtacaataatggaaaataata 32440783  T
Q  101 ataaatattgcattggta--ttgtaaagtgacaattattttgag 142  Q
    ||||||  ||||||| ||  || |||||||||||||||||||||    
T  32440784 ataaatgctgcattgatattttctaaagtgacaattattttgag 32440827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 7920289 - 7920175
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaa 125  Q
    ||||||||||||||||||| |||| |||| ||  ||||||||||||||||||  |||||||||||         ||||||| |||||||| |||| ||||    
T  7920289 ttattaattgtagttagtgaagtatttaatttgaatgaaattcaataaataatggtataatagtg--aaaaataaataaatgttgcattgatattctaaa 7920192  T
Q  126 gtgacaattattttgag 142  Q
    |||| ||||||||||||    
T  7920191 gtgataattattttgag 7920175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 10923426 - 10923505
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||||||  || || |||||||||| ||||||| || |||| || ||||||||||||||||||||| |||||||||    
T  10923426 atttactaaaataccgttgttaattgtagctagtggaataattaaattagatgaaattcaataaataagaatataatagt 10923505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 17829007 - 17828932
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    ||||||||||||   | ||||||||||||||||||| |||| ||||||| ||||||||| ||| ||||||||||||    
T  17829007 catttactaaaatatctttattaattgtagttagtgaagtaattaagttggatgaaatttaattaataagagtata 17828932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 21425635 - 21425738
Alignment:
Q  40 tagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg--nnnnnnntaataaatattgcattggtattgtaaagtgacaattatt 137  Q
    ||||| |||||||||||| ||||||||||||||||||||  |||||| ||||         |||||||| |||||||| ||||||||||| |||||||||    
T  21425635 tagtgaagtagttaagttggatgaaattcaataaataaggatataatggtggaaaaaataataataaatgttgcattgatattgtaaagtaacaattatt 21425734  T
Q  138 ttga 141  Q
    ||||    
T  21425735 ttga 21425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 22398463 - 22398412
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  22398463 ttattaattgtagttattgaagtagttaagttagatgaaattcaataaataa 22398412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 34300070 - 34299931
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    |||||||  |||||||||||   | ||||||||||| ||||||| |||||||||||| ||||  ||||||||||||||  |||| ||||||        |    
T  34300070 attagtattatttactaaaatatccttattaattgtggttagtgaagtagttaagttggatggtattcaataaataaggatatattagtggaaagaaaat 34299971  T
Q  100 aataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    ||||||| ||| |||| |||| ||||||||||||||||||    
T  34299970 aataaatgttgtattgatattctaaagtgacaattatttt 34299931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 15582326 - 15582222
Alignment:
Q  33 ttgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaa 132  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||  ||| ||||||        |||||| |||||||||| |||| |||| ||||||    
T  15582326 ttgtagttagtgaagtggttaagtttaatgaaattcaataaataaggatatgatagtg--aaaaaataataattattgcattgatattctaaaatgacaa 15582229  T
Q  133 ttatttt 139  Q
    |||||||    
T  15582228 ttatttt 15582222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 1063671 - 1063727
Alignment:
Q  30 taattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataat 86  Q
    ||||||||||||||||||||||||||||  |||||||| ||||| |||| |||||||    
T  1063671 taattgtagttagtggagtagttaagttaaatgaaatttaataagtaagggtataat 1063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 16205222 - 16205274
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||||||||||||||| || ||||||| ||||||| ||||||||||||    
T  16205222 ttattaattgtagttagtggaatatttaagttagatgaaactcaataaataag 16205274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 7072060 - 7071997
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||| ||| ||||||||| |||||  | |||||||||||||||||||||||| ||||||||||    
T  7072060 ttattgattatagttagtgaagtagcaacgtttgatgaaattcaataaataagtgtataatagt 7071997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 21478232 - 21478275
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||| ||| |||||||||||||||||||||||||||||||    
T  21478232 taataaatgttgtattggtattgtaaagtgacaattattttgag 21478275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 27367524 - 27367607
Alignment:
Q  61 tgaaattcaataaataagagtataatagtggnnnnnnn--taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||||||||| ||||||||||||         |||||||| || ||||||||||||||||||||||||||| ||||    
T  27367524 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggtattgtaaagtgacaattattctgag 27367607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 27457871 - 27457954
Alignment:
Q  61 tgaaattcaataaataagagtataatagtggnnnnnnn--taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||||||||| ||||||||||||         |||||||| || ||||||||||||||||||||||||||| ||||    
T  27457871 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggtattgtaaagtgacaattattctgag 27457954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 4367317 - 4367378
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||||||| ||||||||||||  |||||||| |||||||||| | ||||||    
T  4367317 ttattaactgtagttagtgaagtagttaagttgcatgaaatttaataaataagggaataata 4367378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 33510190 - 33510129
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||| ||| | ||||||||||||| ||||||||| | |||||||| ||||||||    
T  33510190 ttattaattgtaattaattgagtagttaagttggatgaaatttattaaataagggtataata 33510129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 1956018 - 1956150
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg-gnnnnnnnt 99  Q
    ||||||| |||||||||| |  |  ||||||||||||||||||| ||||| |  ||| ||| |||||||||||||||| |||||||| || |       |    
T  1956018 attagtatcatttactaatatactcttattaattgtagttagtgaagtagctgtgttcgataaaattcaataaataag-gtataataatgagaaaaaaat 1956116  T
Q  100 aataaatattgcattggtattgtaaagtgacaat 133  Q
    ||||||| |||||||| |||| ||||||||||||    
T  1956117 aataaatgttgcattgttattataaagtgacaat 1956150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 27367236 - 27367279
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||  |||||||||||| |||||||||||||||||||||    
T  27367236 taataaatgatgcattggtattctaaagtgacaattattttgag 27367279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 27457583 - 27457626
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||  |||||||||||| |||||||||||||||||||||    
T  27457583 taataaatgatgcattggtattctaaagtgacaattattttgag 27457626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 30539125 - 30539192
Alignment:
Q  225 ctgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    ||||||||| |||| | ||||||| || ||||||||||||| || |||||| |||||| |||||||||    
T  30539125 ctgttggaaattccgcctttattgcggtccgcccctagtcgcctaaattgcagcctttggtttgcctt 30539192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 12134696 - 12134630
Alignment:
Q  226 tgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||||||| |||| | |||||| ||| ||||||||||||  || ||||||||||||| |||||||||    
T  12134696 tgttggaaattccgcctttattctggtccgcccctagtcacctaaattgcggcctttggtttgcctt 12134630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 13206896 - 13206954
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtata 84  Q
    ||||||||||||||||||||||| ||||| ||   || ||||||||||||||| |||||    
T  13206896 ttattaattgtagttagtggagttgttaaattgagtgtaattcaataaataagggtata 13206954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 21425397 - 21425470
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttga-tgaaattcaataaataagagtat 83  Q
    |||||||||||| | |||||||||| |||||||||||||| ||||   ||| |||||| ||||||||||||||||    
T  21425397 atttactaaaacac-attattaattatagttagtggagtacttaaaaatgattgaaatgcaataaataagagtat 21425470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 23397754 - 23397796
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    |||||||| |||||||| |||| ||||||||||||||||||||    
T  23397754 taataaatgttgcattgatattctaaagtgacaattattttga 23397796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 141
Target Start/End: Original strand, 28106013 - 28106105
Alignment:
Q  46 agtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||||||||  ||||||||||||||||||   |||||||||||        | ||||  |||||||| |||||||||||||||||||||||||    
T  28106013 agtagttaagttgaatgaaattcaataaataatgatataatagtggaaaaa---attaaaacttgcattgttattgtaaagtgacaattattttga 28106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 6834416 - 6834484
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||| || ||||||||| |||||||| || ||| ||| ||  |||| |||||||||||||    
T  6834416 catttactaaaacacctttattaattatagttagtagaatagataaattgaatgagattcaataaataa 6834484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 22911385 - 22911321
Alignment:
Q  228 ttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||||| |||||| ||||||  || ||||||||||||| || ||||||| ||||| |||||||||    
T  22911385 ttggaaattccacctttattacggtccgcccctagtcgcctaaattgcgacctttggtttgcctt 22911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 6315823 - 6315956
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  || ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| |||       |||||||| |    
T  6315823 catttactaaaatacccttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatggaaaataataataaatgt 6315922  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  6315923 tgcattggtattctaaagtgacaattattttgag 6315956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 40530262 - 40530403
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnnt 99  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||| ||       |    
T  40530262 attagtagcatttactaaaacacccttattaattgtagttagtggagtggttaagttggatgaaattaaataaataagggtataatagtgggaaataaat 40530361  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  40530362 aataaatgctgcattggtattgtaaagtgacaattattttga 40530403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 40899993 - 40899852
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||       ||    
T  40899993 attagtatcatttactaaaacacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaataata 40899894  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||| || |||| |||||||||||||||||||||    
T  40899893 ataaatgctgcaatgttattctaaagtgacaattattttgag 40899852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 6753696 - 6753836
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||       ||    
T  6753696 attagtatcatttactaaaatacccttattaattgtagttagtggagtagttaagttggatgaaatttaataaataagggtataataatggaaaaagata 6753795  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    |||||| ||||||||||||| |||||||| |||||||||||    
T  6753796 ataaatgttgcattggtattctaaagtgataattattttga 6753836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 41496147 - 41496014
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||| || |||||||| ||||||||||  ||||||||||||       |||||||| |    
T  41496147 catttagtaaaacatcattattaattgtagttagtggagtagttaaattggatgaaatgcaataaataaaggtataatagtggaaaagaataataaatgt 41496048  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| |||||||||||||||||||||||||||    
T  41496047 tgcattagtattgtaaagtgacaattattttgag 41496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 19930013 - 19929882
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    |||||||||||||  | ||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||||||| |||       |||||||| |    
T  19930013 catttactaaaacatccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataagggtataataatggaaaataataataaatgt 19929914  T
Q  109 tgcattggtattgtaaagtgacaattattttg 140  Q
    |||||||||||| |||||||||||||||||||    
T  19929913 tgcattggtattctaaagtgacaattattttg 19929882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4818626 - 4818484
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnnt 99  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||||||||| ||       |    
T  4818626 attagtagcatttactaaaacacccttattaattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataatagtgggaaaaaaat 4818527  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||  | |||||||||| |||||||||||||||||||||    
T  4818526 aataaatgctacattggtattataaagtgacaattattttgag 4818484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 8698376 - 8698242
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnntaataaata 107  Q
    ||||||| ||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||        |||||||||    
T  8698376 catttaccaaaacacccttattaattgtagttagtggagtggttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaata 8698277  T
Q  108 ttgcattggtattgtaaagtgacaattattttgag 142  Q
     | ||||| ||||||||||||||||||||||||||    
T  8698276 ctacattgatattgtaaagtgacaattattttgag 8698242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 6754096 - 6753963
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |  |||        || |||| |    
T  6754096 catttactaaaacactcttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtatattgatggaaaaaaaaaaaaaatgt 6753997  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  6753996 tgcattggtattataaagtgacaattattttgag 6753963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 42803658 - 42803799
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||  |||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||| |         ||    
T  42803658 attagtagtatttactaaaacaccattattaattgtagttaatggagtggttaagttggatgaaattcaataaataagagtataatattaaaagaaaata 42803757  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||  |||||| ||| |||||| ||||||||||||||||    
T  42803758 ataaatgatgcattagtactgtaaaatgacaattattttgag 42803799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6615918 - 6616059
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg-nnnnnnnt 99  Q
    ||||||| ||||||| |||||  | ||||||||| ||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||||        |    
T  6615918 attagtagcatttaccaaaacatccttattaattttagttagtggagtggttaagttggatg-aattcaataaataagggtataatagtggaaaaaaaat 6616016  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  6616017 aataaatgttgcataggtattgtaaagtgacaattattttgag 6616059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 27542862 - 27542729
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  |  |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||       ||||| ||      
T  27542862 catttactaaaatactcttattaattgtagttagtggagtagttaagttggataaaattcaataaataagagtataataatggaaaaaagtaatacatgc 27542763  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||| |||||| ||||||||||||||    
T  27542762 tgcattagtattctaaagtcacaattattttgag 27542729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 15818529 - 15818661
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatatt 109  Q
    |||||||||||| || |||||||||||| | |||||||||||||| || ||||||||| |||||||||  | ||||||||||       |||| ||| ||    
T  15818529 atttactaaaacacctttattaattgtaatcagtggagtagttaaattggatgaaatttaataaataaaggcataatagtggaaacaagtaattaatgtt 15818628  T
Q  110 gcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||||||||||||| ||||||||||    
T  15818629 gcattggtattgtaaagtgacagttattttgag 15818661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 1248650 - 1248783
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  || ||||||||||||||||||| ||||||||||||  || ||||||||| |||||| |||||||| ||        |||||||| |    
T  1248650 catttactaaaatacccttattaattgtagttagtgaagtagttaagttgaataaaattcaattaataagggtataataatgaaaaataataataaatgt 1248749  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| |||| |||||||||||||||||||||    
T  1248750 tgcattgatattctaaagtgacaattattttgag 1248783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 29570458 - 29570378
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||| ||||||| || |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  29570458 atttgctaaaacacctttattaattgtagttaatggaatagttaagttggatgaaattcaataaataagagtataatagtg 29570378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 31655103 - 31654987
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggta-ttgtaa 124  Q
    |||||||||||||||||||||||| ||| |||  ||||||||||||||||||| ||||||||||||       |||||| ||||| ||||||| || |||    
T  31655103 ttattaattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtataatagtggaaataaataataattattgtattggtatttttaa 31655004  T
Q  125 agtgacaattattttga 141  Q
    |||||||||||||||||    
T  31655003 agtgacaattattttga 31654987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 7827964 - 7828102
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| |||||| |||||  || |||||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||||| ||        ||    
T  7827964 attagtatcatttattaaaatacccttattaattgtagttagtggagtagttaagttggatgaaatttaataaataaggatataataatgaaaaaagata 7828063  T
Q  101 ataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    ||||||||||||||| |||| |||| ||| |||| ||||    
T  7828064 ataaatattgcattgatattttaaaatgataattttttt 7828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 8725055 - 8725133
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||||||    
T  8725055 catttactaaaacacacttattaattgtagttagtggagtagttaacttgaatgaaattcaataaataatagtataata 8725133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 9515777 - 9515668
Alignment:
Q  35 gtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg---nnnnnnntaataaatattgcattggtattgtaaagtgaca 131  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||||||||          ||||||||  |||||| ||||||||||||||||    
T  9515777 gtagttagtggagtagttaagttgaatgaaattcattaaataagagtataatagtggaaaataataataataaatgatgcattagtattgtaaagtgaca 9515678  T
Q  132 attattttga 141  Q
    ||||||||||    
T  9515677 attattttga 9515668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 11796229 - 11796295
Alignment:
Q  25 attattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||    
T  11796229 attattaattgtagttagtgtagtagttaagttagatgaaatttaataaataagagtatactagtgg 11796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 29374409 - 29374328
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||||||  || ||||||||||||||||||||||||||||| ||  || |||||||||||||||| |||||||||||    
T  29374409 catttactaaaagacctttattaattgtagttagtggagtagttaaattgaataaaattcaataaataagggtataatagtg 29374328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 21060705 - 21060569
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    |||||||  |||||||||||  |  |||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||| |||        |    
T  21060705 attagtattatttactaaaatactcttattaattgtagttagtggagtagttaagttggataaaattcaataaataatggtataataatggaaaataa-a 21060607  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattt 138  Q
    ||||||  ||||||| |||| |||||||||||||||||    
T  21060606 ataaatgatgcattgatattctaaagtgacaattattt 21060569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 22848431 - 22848511
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||| |||||| || |||||||||||||||| |||||||||||  || |||||||||||||||||||| |||||||||||    
T  22848431 atttattaaaacacccttattaattgtagttaatggagtagttagattggatgaaattcaataaataagggtataatagtg 22848511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 27580667 - 27580540
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||  || ||||||||||||||||||||||||||||||||  |||||||| | |||||||  |||||||| |||        || |||| |    
T  27580667 catttactaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaattaattaaataaatgtataataatggga------aaaaaatgt 27580574  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||  |||||||||||||||||||||||    
T  27580573 tgcattggttatgtaaagtgacaattattttgag 27580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 4441071 - 4441008
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||||||||    
T  4441071 ttattaattgtagttagtggagtagttaaattggatgaaattcaataaataacggtataatagt 4441008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 41062198 - 41062338
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||||||| || |||||||||||||||||| || || ||||| | |||| | ||||||||||||| |||| ||| |||       ||    
T  41062198 attagtatcatttactaaaacacccttattaattgtagttagtagaataattaagctggatggagttcaataaataagggtattataatgg-aaaaaata 41062296  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||| ||||||||||||| |||||| | ||||||||||||    
T  41062297 ataaatgttgcattggtattctaaagttataattattttgag 41062338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 3348177 - 3348309
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatatt 109  Q
    ||||| |||||| || ||||||| ||||||| ||| |||| ||||||| |||||| |||||||||||||  ||| ||| |||       ||||||||  |    
T  3348177 atttattaaaacacccttattaaatgtagttggtgaagtaattaagttggatgaagttcaataaataaggatattataatggaaaaaaataataaatgct 3348276  T
Q  110 gcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||||||| |||| ||||||||||||||||    
T  3348277 gcattggtattctaaaatgacaattattttgag 3348309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 2232145 - 2232195
Alignment:
Q  39 ttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  2232145 ttagtggagtagttaagttggatgaaattcaataaataagggtataatagt 2232195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41492377 - 41492290
Alignment:
Q  1 attagtaacatttactaaaac-tccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatag 88  Q
    |||||| |||||||||||||  ||| || |||| |||||||| |||| |||||||||| |||||||||||||||||||| |||||||||    
T  41492377 attagtgacatttactaaaatatcccttgttaaatgtagttaatgga-tagttaagttagatgaaattcaataaataagggtataatag 41492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 41478894 - 41478815
Alignment:
Q  9 catttactaaaac-tccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatag 88  Q
    ||||||||||||  ||| || ||||||| ||||| |||| |||||||||| |||||||||||||||||||| |||||||||    
T  41478894 catttactaaaatatcccttgttaattgcagttaatgga-tagttaagttagatgaaattcaataaataagggtataatag 41478815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 2588111 - 2588242
Alignment:
Q  13 tactaaaactccattattaattgtagtta--gtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattg 110  Q
    ||||||||| || ||||||||||||||||  ||| ||||||||| || ||| || ||||||||||||| |||| ||| ||         |||||||  ||    
T  2588111 tactaaaacacccttattaattgtagttagtgtgcagtagttaaattggataaagttcaataaataagggtattataatgaaaaaataaaataaatgctg 2588210  T
Q  111 cattggtattgtaaagtgacaattattttgag 142  Q
    ||||| |||| |||||||||||||||||||||    
T  2588211 cattgatattctaaagtgacaattattttgag 2588242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 37101274 - 37101329
Alignment:
Q  32 attgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||| | |||||||    
T  37101274 attgtagttagtagagtaattaaatttgatgaaattcaataaataaaaatataata 37101329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15439357 - 15439442
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| ||||||||||||  |  |||||||||||| |||| | ||||||||||||||||  |||| |||||||||| ||||||||    
T  15439357 attagtatcatttactaaaatacttttattaattgtatttagagtagtagttaagtttgat-taatttaataaataagggtataata 15439442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 38161458 - 38161515
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaat 66  Q
    ||||||||||||   | |||||||| ||||||||||||||||||||||| ||||||||    
T  38161458 catttactaaaatatccttattaatcgtagttagtggagtagttaagttggatgaaat 38161515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 39325903 - 39325862
Alignment:
Q  36 tagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  39325903 tagttagtggagtagttaagttggattaaattcaataaataa 39325862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 29856097 - 29856066
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtt 57  Q
    ||||||||||||||||||||||||||||||||    
T  29856097 ttattaattgtagttagtggagtagttaagtt 29856066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 11904252 - 11904190
Alignment:
Q  29 ttaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||| ||||||||||||| || ||| ||| ||||||| ||||  |||||||||||    
T  11904252 ttaattgtagttggtggagtagttaaattcgataaaaatcaataattaaggctataatagtgg 11904190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 26285542 - 26285592
Alignment:
Q  27 tattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||||| || ||||||||||||  || |||||||||||||||    
T  26285542 tattaattgtagttaatgaagtagttaagttgtataaaattcaataaataa 26285592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 29374170 - 29374128
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    |||||||| |||||||| ||||||||||||| |||||||||||    
T  29374170 taataaatgttgcattgatattgtaaagtgataattattttga 29374128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 37995847 - 37995781
Alignment:
Q  226 tgttggaacttccacttttattgtggcccgcccctagtcgtcttaattgcggcctttagtttgcctt 292  Q
    |||||||| |||| | ||||||| || | ||||||||||| || ||||||||||||| |||||||||    
T  37995847 tgttggaaattccgcctttattgcggtctgcccctagtcgcctaaattgcggcctttggtttgcctt 37995781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 41480179 - 41480137
Alignment:
Q  48 tagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    |||||||||| |||||||||||||||||||  |||||||||||    
T  41480179 tagttaagttggatgaaattcaataaataaaggtataatagtg 41480137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 32439902 - 32439857
Alignment:
Q  46 agtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    |||||||||||| |||||||||||||||||| |  |||||||||||    
T  32439902 agtagttaagttggatgaaattcaataaatagggatataatagtgg 32439857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 41478813 - 41478772
Alignment:
Q  48 tagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    |||||||||| |||||||||||||||||||  ||||||||||    
T  41478813 tagttaagttggatgaaattcaataaataaaggtataatagt 41478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 3076654 - 3076622
Alignment:
Q  46 agtagttaagtttgatgaaattcaataaataag 78  Q
    |||||||||||| ||||||||||||||||||||    
T  3076654 agtagttaagttagatgaaattcaataaataag 3076622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 18841546 - 18841478
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    |||||| |||||  || ||||||||||||||||||| | || |||| || | |||||||||||||||||    
T  18841546 catttaataaaataccgttattaattgtagttagtgaaataattaaattgggtgaaattcaataaataa 18841478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 30512757 - 30512801
Alignment:
Q  34 tgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||||| | |||||||||| ||||||||| ||||||||||    
T  30512757 tgtagttagtgaaatagttaagttggatgaaatttaataaataag 30512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 30553097 - 30553141
Alignment:
Q  34 tgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||||| | |||||||||| ||||||||| ||||||||||    
T  30553097 tgtagttagtgaaatagttaagttggatgaaatttaataaataag 30553141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 37184125 - 37184193
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||   | ||||| |||||||||| | || |  |||||||||||||||||||||||||||    
T  37184125 catttactaaaatatctttattcattgtagttaatagactgattaagtttgatgaaattcaataaataa 37184193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 41480221 - 41480181
Alignment:
Q  48 tagttaagtttgatgaaattcaataaataagagtataatag 88  Q
    |||||||||| ||||||||||||||||||||| ||| ||||    
T  41480221 tagttaagttagatgaaattcaataaataagattatgatag 41480181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 34067 - 34199
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || ||||||||||||||||||| | |||||||||| |||||||||||||||||||  ||||||||||||       ||||||||      
T  34067 catttactaaaacacccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtgg-aaaaaataataaatga 34165  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||||||||||||||||||||||||||    
T  34166 tgcattgatattgtaaagtgacaattattttgag 34199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 732 - 864
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatat 108  Q
    ||||||||||||| || ||||| |||||||||||||||||  |||| || |||||||||||||||||||| ||||||||||||       || | ||| |    
T  732 catttactaaaacacctttattgattgtagttagtggagtgtttaaattggatgaaattcaataaataagggtataatagtgg-aaaaaatattcaatgt 830  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||| |||||||||||||||||||||||||||||    
T  831 tgcaatggtattgtaaagtgacaattattttgag 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 8030 - 8163
Alignment:
Q  10 atttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt-ggnnnnnnntaataaatat 108  Q
    |||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||| ||| | ||       ||||||||      
T  8030 atttaccaaaacacccttattaattgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatgggaaaaaaataataaatgc 8129  T
Q  109 tgcattggtattgtaaagtgacaattattttgag 142  Q
    |||||||||||| |||||||||||||||||||||    
T  8130 tgcattggtattctaaagtgacaattattttgag 8163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 252848 - 252984
Alignment:
Q  4 agtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaata 103  Q
    |||| ||||||||||||   | |||||||||||||| | |||||||||||||||  |||||||||||||||||||||||||||| | |       |||||    
T  252848 agtatcatttactaaaatatcgttattaattgtagt-attggagtagttaagttgaatgaaattcaataaataagagtataataat-gaaaaaaataata 252945  T
Q  104 aatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||| ||||||||||||| ||||||||||||| |||||||    
T  252946 aatgttgcattggtattataaagtgacaatttttttgag 252984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 136085 - 136165
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagt 89  Q
    ||||||||||||| || ||||||||| ||||||||| |||||||||||||||||||||| |||||||||  ||||||||||    
T  136085 catttactaaaacacccttattaattatagttagtgaagtagttaagtttgatgaaattaaataaataatggtataatagt 136165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1779 - 1693
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| |||||||| |||| ||  ||||||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  1779 attagtatcatttacttaaacacccgtattaattgtagtcagtggagtagttaagttggattaaattcaataaataagggtataata 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 1533 - 1493
Alignment:
Q  99 taataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||| |||||| |||||| ||||||||||||||||||    
T  1533 taataaatgttgcatcggtattctaaagtgacaattatttt 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 105749 - 105673
Alignment:
Q  11 tttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||||||| || ||||||||||||||||||| ||||||||||||  ||||||||| ||||||||| ||||||||    
T  105749 tttactaaaacacccttattaattgtagttagtgaagtagttaagttgaatgaaattcgataaataagggtataata 105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 50279 - 50139
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnnta 100  Q
    ||||||| ||||||||| ||   | |||||||||  ||||||||||||| |||||||  |||||||| |||||||||| |||||||||||        ||    
T  50279 attagtatcatttactataatatctttattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagtgaaaaataata 50180  T
Q  101 ataaatattgcattggtattgtaaagtgacaattattttga 141  Q
    ||||||  ||||||| |||| ||||||||||||||||||||    
T  50179 ataaatgctgcattgatattctaaagtgacaattattttga 50139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 22423 - 22282
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagtt-aagtttgatgaaattcaataaataagagtataatagtggnnnnnnnt 99  Q
    ||||||| ||||||||||||   | |||||||| || ||||||| ||||||| || || ||| ||||||||||||||||  ||||||||| |       |    
T  22423 attagtatcatttactaaaatatctttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataaggatataatagt-gaaaaaaat 22325  T
Q  100 aataaatattgcattggtattgtaaagtgacaattattttgag 142  Q
    ||||||| ||| || ||||||||||||||| ||||||||||||    
T  22324 aataaatgttgtatcggtattgtaaagtgataattattttgag 22282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 20393 - 20479
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    ||||||| |||||| |||||  || |||||||||| |||||||| |||||||||||| ||||||||||||||||| || ||||||||    
T  20393 attagtatcatttagtaaaatacccttattaattgcagttagtgaagtagttaagttggatgaaattcaataaatgagggtataata 20479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 76328 - 76229
Alignment:
Q  40 tagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggnnnnnnntaataaatattgcattggtattgtaaagtgacaattatttt 139  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||         ||||||||| ||||||| |||| || |||||||||||||||    
T  76328 tagtggagtagttaagttagatgaaattcaataaataagggtataatagtcaaaaaaaataataaatactgcattgatattatagagtgacaattatttt 76229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 5457 - 5389
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataa 77  Q
    ||||||||||||   | ||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  5457 catttactaaaatatccttattaattttagttagtggagtagttaagttggatgaaattcaataaataa 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 14233 - 14297
Alignment:
Q  26 ttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtg 90  Q
    ||||||||| |||||| |||||||||||| ||||||||||||||||||||||  |||||||||||    
T  14233 ttattaattatagttaatggagtagttaaatttgatgaaattcaataaataaaggtataatagtg 14297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 2092 - 2014
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataata 87  Q
    |||||||||||||  | ||||||||||||||||||||| || |||  || |||||||||||||||||||| ||||||||    
T  2092 catttactaaaacatccttattaattgtagttagtggattaattacattcgatgaaattcaataaataagggtataata 2014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 16165 - 16096
Alignment:
Q  9 catttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataag 78  Q
    ||||||||||||| |  |||||||||||||||| || || ||||||| | ||||||||||||||||||||    
T  16165 catttactaaaacacacttattaattgtagttaatgaagcagttaagatggatgaaattcaataaataag 16096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17110 - 17020
Alignment:
Q  1 attagtaacatttactaaaactccattattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtgg 91  Q
    ||||||| |||||| || ||| || ||||||||| |||||| ||| ||| ||| |||  |||||||||||||||||| | |||||||||||    
T  17110 attagtagcatttattagaacacccttattaattatagttaatggcgtaattacgttgaatgaaattcaataaataaaattataatagtgg 17020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 56708 - 56664
Alignment:
Q  29 ttaattgtagttagtggagtagttaagtttgatgaaattcaataa 73  Q
    |||||||||||||||||| || ||||||| || ||||||||||||    
T  56708 ttaattgtagttagtggaataattaagttggaagaaattcaataa 56664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University