View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18662_low_13 (Length: 305)
Name: NF18662_low_13
Description: NF18662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18662_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 5 - 292
Target Start/End: Original strand, 8205005 - 8205292
Alignment:
| Q |
5 |
ctaaatgtgttaagtcaaatttctttatgcttcacaccaatcaaatttggaacccaagactcggaactcatggcttgttagaatgcatttacattttagg |
104 |
Q |
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| T |
8205005 |
ctaaatgtgttaagtcaaatttctttatgcttcacaccaatcaaatttggaacccaagactcggaactcatggcttgttagaatgcatttacattttagg |
8205104 |
T |
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| Q |
105 |
ctcgatgattaggagtgaggcaaccaggtgaactagagaaatcttaattgtaggagaagtggacatatgactgatctatgcctgaaaacaacttggacgg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8205105 |
ctcgatgattaggagtgaggcaaccaggtgaactagagaaatctcaattgtaggagaagtggacatatgactgatctatgcctgaaaacaacttggacgg |
8205204 |
T |
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| Q |
205 |
aaggggtgaggcgacgaccaatccggagtacccaataagtcgtaaatatgaagagttatttcacacatgacgcgctatgttgcatcat |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8205205 |
aaggggtgaggcgacgaccaatccggagtacccaataagtcgtaaatatgaagagttatttcacacatgacgcgctatgttgcatcat |
8205292 |
T |
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