View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18662_low_14 (Length: 287)

Name: NF18662_low_14
Description: NF18662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18662_low_14
NF18662_low_14
[»] chr8 (38 HSPs)
chr8 (59-287)||(41479083-41479318)
chr8 (59-287)||(24501788-24502033)
chr8 (83-282)||(26374429-26374645)
chr8 (59-287)||(2704794-2705039)
chr8 (83-287)||(42938116-42938337)
chr8 (59-287)||(42735252-42735497)
chr8 (83-287)||(23115168-23115388)
chr8 (59-287)||(42937339-42937582)
chr8 (59-287)||(43959644-43959878)
chr8 (59-282)||(7506874-7507114)
chr8 (95-287)||(32711305-32711502)
chr8 (59-287)||(5576595-5576841)
chr8 (84-284)||(10392237-10392454)
chr8 (90-287)||(18305977-18306181)
chr8 (90-287)||(7466321-7466525)
chr8 (90-284)||(32497514-32497715)
chr8 (90-284)||(16362185-16362386)
chr8 (83-147)||(9770439-9770503)
chr8 (90-287)||(42305801-42306005)
chr8 (83-191)||(4403196-4403314)
chr8 (90-287)||(9288463-9288677)
chr8 (90-287)||(14782141-14782355)
chr8 (159-287)||(39467553-39467688)
chr8 (90-287)||(44725816-44726030)
chr8 (90-287)||(19717887-19718101)
chr8 (149-276)||(31623692-31623826)
chr8 (149-287)||(4031333-4031478)
chr8 (90-190)||(37857209-37857309)
chr8 (83-191)||(39189815-39189931)
chr8 (159-287)||(18958812-18958947)
chr8 (141-191)||(10295448-10295498)
chr8 (141-191)||(43166757-43166807)
chr8 (89-153)||(4950021-4950085)
chr8 (90-154)||(10295386-10295450)
chr8 (141-184)||(13478317-13478360)
chr8 (141-191)||(26856156-26856206)
chr8 (90-156)||(26856201-26856267)
chr8 (228-287)||(43166809-43166868)
[»] chr4 (69 HSPs)
chr4 (60-287)||(31314719-31314949)
chr4 (83-284)||(46635648-46635860)
chr4 (59-287)||(25331116-25331361)
chr4 (59-287)||(24130957-24131193)
chr4 (83-287)||(41881082-41881304)
chr4 (83-287)||(55302828-55303049)
chr4 (83-287)||(12112930-12113151)
chr4 (83-287)||(22202000-22202221)
chr4 (84-287)||(32950837-32951057)
chr4 (61-287)||(1044794-1045035)
chr4 (83-287)||(1112878-1113099)
chr4 (83-287)||(7007359-7007580)
chr4 (83-287)||(37046450-37046673)
chr4 (84-287)||(40537161-40537366)
chr4 (59-287)||(30009653-30009898)
chr4 (59-281)||(34228559-34228798)
chr4 (60-287)||(39479332-39479578)
chr4 (90-191)||(56445362-56445463)
chr4 (83-243)||(42786713-42786890)
chr4 (141-287)||(28541683-28541836)
chr4 (90-191)||(12913312-12913413)
chr4 (108-287)||(19740933-19741129)
chr4 (90-287)||(23987199-23987403)
chr4 (61-191)||(41320898-41321038)
chr4 (83-165)||(11090428-11090510)
chr4 (90-188)||(36479249-36479346)
chr4 (112-287)||(25446036-25446227)
chr4 (59-282)||(3436583-3436823)
chr4 (90-287)||(30967316-30967520)
chr4 (83-284)||(53275827-53276046)
chr4 (141-287)||(23464940-23465093)
chr4 (141-287)||(25504707-25504860)
chr4 (90-191)||(49501526-49501629)
chr4 (90-191)||(49507591-49507694)
chr4 (90-156)||(8711999-8712065)
chr4 (83-155)||(39307253-39307325)
chr4 (90-287)||(5441389-5441603)
chr4 (90-287)||(27768041-27768255)
chr4 (84-191)||(28483987-28484093)
chr4 (113-191)||(7249795-7249883)
chr4 (149-287)||(49834889-49835034)
chr4 (141-287)||(51320906-51321059)
chr4 (90-287)||(54341129-54341343)
chr4 (93-191)||(5800066-5800164)
chr4 (90-156)||(24736468-24736534)
chr4 (217-287)||(7249923-7249993)
chr4 (141-287)||(9163061-9163214)
chr4 (141-287)||(37915812-37915965)
chr4 (83-155)||(27454078-27454150)
chr4 (90-191)||(32322179-32322290)
chr4 (89-155)||(41581795-41581862)
chr4 (149-191)||(32684064-32684106)
chr4 (141-284)||(37828470-37828620)
chr4 (251-285)||(41320735-41320769)
chr4 (93-191)||(50018339-50018437)
chr4 (90-191)||(37828409-37828520)
chr4 (218-287)||(37915770-37915839)
chr4 (92-156)||(44770862-44770926)
chr4 (141-191)||(29649735-29649785)
chr4 (212-287)||(32684133-32684208)
chr4 (212-287)||(39307399-39307474)
chr4 (141-191)||(44770921-44770971)
chr4 (141-191)||(48261215-48261265)
chr4 (90-156)||(48261260-48261326)
chr4 (90-156)||(54853475-54853541)
chr4 (209-287)||(20021329-20021407)
chr4 (90-155)||(41725256-41725321)
chr4 (209-287)||(54853611-54853689)
chr4 (251-287)||(44771039-44771075)
[»] chr3 (64 HSPs)
chr3 (83-287)||(19253812-19254033)
chr3 (59-287)||(20498194-20498439)
chr3 (83-287)||(3999645-3999866)
chr3 (83-287)||(29448858-29449079)
chr3 (59-287)||(996062-996307)
chr3 (59-287)||(10139122-10139367)
chr3 (59-287)||(37820453-37820698)
chr3 (83-287)||(33807798-33808020)
chr3 (83-287)||(6589549-6589770)
chr3 (59-287)||(35337720-35337963)
chr3 (83-191)||(27899432-27899540)
chr3 (59-243)||(3206181-3206382)
chr3 (83-287)||(44762037-44762258)
chr3 (83-287)||(54625577-54625798)
chr3 (89-276)||(33996547-33996751)
chr3 (83-284)||(40246832-40247050)
chr3 (83-287)||(25418351-25418572)
chr3 (83-156)||(6035053-6035126)
chr3 (83-274)||(53929128-53929336)
chr3 (98-287)||(51699495-51699700)
chr3 (84-284)||(52114516-52114734)
chr3 (83-156)||(6131233-6131306)
chr3 (83-191)||(52080015-52080117)
chr3 (90-287)||(10728658-10728862)
chr3 (90-282)||(39038030-39038229)
chr3 (141-287)||(1440020-1440174)
chr3 (141-287)||(29029991-29030143)
chr3 (83-191)||(39842494-39842602)
chr3 (90-282)||(37454851-37455050)
chr3 (83-157)||(1439894-1439968)
chr3 (101-191)||(6975834-6975924)
chr3 (83-191)||(5825150-5825268)
chr3 (84-175)||(44276489-44276580)
chr3 (149-287)||(23753462-23753607)
chr3 (150-287)||(44906590-44906734)
chr3 (90-287)||(17946273-17946487)
chr3 (83-134)||(33807680-33807731)
chr3 (141-287)||(22057746-22057900)
chr3 (90-191)||(50762067-50762168)
chr3 (141-287)||(52618033-52618186)
chr3 (127-287)||(10660520-10660687)
chr3 (128-191)||(23535866-23535929)
chr3 (90-287)||(36674137-36674351)
chr3 (90-287)||(40897129-40897343)
chr3 (212-287)||(6131317-6131392)
chr3 (90-156)||(54628977-54629043)
chr3 (141-287)||(34484098-34484251)
chr3 (90-191)||(18749700-18749811)
chr3 (90-287)||(11431511-11431725)
chr3 (141-273)||(26107260-26107399)
chr3 (211-287)||(54628828-54628904)
chr3 (141-191)||(32580264-32580314)
chr3 (141-191)||(51737794-51737844)
chr3 (209-287)||(18749555-18749633)
chr3 (159-191)||(48379245-48379277)
chr3 (219-287)||(6131366-6131434)
chr3 (115-154)||(55235320-55235359)
chr3 (220-287)||(50903397-50903464)
chr3 (150-191)||(539481-539522)
chr3 (209-287)||(12103614-12103692)
chr3 (251-287)||(27240428-27240464)
chr3 (251-287)||(50762235-50762271)
chr3 (159-191)||(54628932-54628964)
chr3 (159-191)||(55235272-55235304)
[»] chr6 (20 HSPs)
chr6 (59-287)||(6197453-6197698)
chr6 (84-287)||(2300738-2300958)
chr6 (83-287)||(1391609-1391830)
chr6 (83-287)||(29076583-29076805)
chr6 (83-287)||(29111556-29111779)
chr6 (59-287)||(28002650-28002895)
chr6 (90-191)||(31067581-31067682)
chr6 (83-287)||(7051830-7052051)
chr6 (90-191)||(30385075-30385174)
chr6 (90-188)||(4200443-4200541)
chr6 (209-281)||(656957-657028)
chr6 (90-287)||(31895681-31895895)
chr6 (141-287)||(34773394-34773547)
chr6 (141-287)||(14262500-14262653)
chr6 (141-191)||(7497164-7497214)
chr6 (90-156)||(34759056-34759122)
chr6 (141-287)||(34759117-34759271)
chr6 (83-132)||(2238668-2238717)
chr6 (84-121)||(11113733-11113770)
chr6 (251-287)||(30385241-30385277)
[»] chr5 (32 HSPs)
chr5 (83-287)||(21147053-21147274)
chr5 (89-287)||(5272924-5273139)
chr5 (59-287)||(7016714-7016959)
chr5 (83-287)||(33656040-33656263)
chr5 (59-287)||(27458925-27459169)
chr5 (59-287)||(32157869-32158118)
chr5 (89-287)||(139259-139474)
chr5 (83-191)||(9220716-9220824)
chr5 (97-243)||(849177-849341)
chr5 (90-284)||(4240468-4240669)
chr5 (90-191)||(5949197-5949298)
chr5 (141-287)||(6460778-6460931)
chr5 (90-191)||(1461154-1461255)
chr5 (90-191)||(40013718-40013819)
chr5 (83-287)||(1152102-1152323)
chr5 (141-287)||(4550324-4550477)
chr5 (83-156)||(9689791-9689864)
chr5 (90-287)||(37013900-37014094)
chr5 (217-287)||(5273111-5273181)
chr5 (90-284)||(14000111-14000322)
chr5 (141-191)||(7947640-7947690)
chr5 (141-191)||(13926020-13926070)
chr5 (209-243)||(16894044-16894078)
chr5 (212-287)||(40013847-40013922)
chr5 (209-286)||(1461280-1461357)
chr5 (90-191)||(39852434-39852545)
chr5 (224-287)||(5949095-5949158)
chr5 (209-276)||(9220849-9220916)
chr5 (150-191)||(14465303-14465344)
chr5 (209-287)||(22746283-22746361)
chr5 (222-287)||(13925917-13925982)
chr5 (159-191)||(22746386-22746418)
[»] chr2 (36 HSPs)
chr2 (83-287)||(24776342-24776563)
chr2 (59-287)||(16269678-16269923)
chr2 (59-287)||(20605223-20605468)
chr2 (59-287)||(31170602-31170847)
chr2 (59-287)||(14198555-14198800)
chr2 (59-287)||(43847633-43847878)
chr2 (83-287)||(5093049-5093270)
chr2 (59-287)||(12407367-12407612)
chr2 (59-287)||(305443-305688)
chr2 (59-287)||(22551741-22551986)
chr2 (59-287)||(35317049-35317294)
chr2 (83-287)||(44765762-44765974)
chr2 (89-287)||(32125237-32125455)
chr2 (103-287)||(1789429-1789630)
chr2 (83-191)||(10125302-10125410)
chr2 (90-287)||(28740302-28740506)
chr2 (83-287)||(26601214-26601423)
chr2 (90-191)||(13833441-13833542)
chr2 (59-156)||(9120261-9120358)
chr2 (217-287)||(20605139-20605209)
chr2 (141-287)||(28844542-28844695)
chr2 (110-287)||(7026591-7026775)
chr2 (90-191)||(3463762-3463863)
chr2 (90-287)||(33135610-33135823)
chr2 (90-156)||(43078698-43078764)
chr2 (141-287)||(10657393-10657546)
chr2 (93-191)||(379027-379125)
chr2 (149-191)||(3574937-3574979)
chr2 (90-156)||(18177402-18177468)
chr2 (220-287)||(26788771-26788838)
chr2 (209-287)||(215370-215448)
chr2 (150-191)||(25288249-25288290)
chr2 (141-191)||(26788876-26788926)
chr2 (259-287)||(9120155-9120183)
chr2 (163-191)||(18177357-18177385)
chr2 (159-191)||(43078653-43078685)
[»] scaffold0400 (1 HSPs)
scaffold0400 (59-287)||(15009-15254)
[»] scaffold0365 (1 HSPs)
scaffold0365 (59-287)||(15652-15897)
[»] chr7 (64 HSPs)
chr7 (84-287)||(43581090-43581310)
chr7 (59-287)||(47914253-47914498)
chr7 (59-287)||(30440783-30441028)
chr7 (59-287)||(34695260-34695505)
chr7 (59-287)||(40996624-40996869)
chr7 (83-287)||(44343395-44343616)
chr7 (59-287)||(973171-973416)
chr7 (59-287)||(18914710-18914955)
chr7 (83-287)||(7719259-7719480)
chr7 (83-287)||(12893395-12893616)
chr7 (59-287)||(34008999-34009245)
chr7 (83-276)||(9179871-9180071)
chr7 (59-287)||(47879155-47879400)
chr7 (83-243)||(7718361-7718538)
chr7 (102-287)||(727499-727692)
chr7 (90-191)||(19810882-19810983)
chr7 (59-287)||(20275238-20275483)
chr7 (59-156)||(39219352-39219449)
chr7 (83-276)||(3797066-3797266)
chr7 (118-287)||(31638862-31639038)
chr7 (84-287)||(19251519-19251729)
chr7 (83-191)||(10068550-10068668)
chr7 (83-191)||(32142916-32143034)
chr7 (83-157)||(7113586-7113660)
chr7 (93-287)||(37327907-37328108)
chr7 (90-287)||(509636-509840)
chr7 (93-282)||(44121919-44122115)
chr7 (93-282)||(44623295-44623491)
chr7 (90-285)||(40460723-40460925)
chr7 (90-191)||(29585597-29585698)
chr7 (83-287)||(12740353-12740573)
chr7 (90-287)||(23101278-23101492)
chr7 (113-191)||(43679504-43679592)
chr7 (90-287)||(28342327-28342541)
chr7 (90-287)||(29614770-29614984)
chr7 (90-287)||(39784079-39784293)
chr7 (141-191)||(12963784-12963834)
chr7 (90-156)||(28034811-28034877)
chr7 (141-287)||(3022906-3023059)
chr7 (213-282)||(8078387-8078457)
chr7 (141-287)||(9882303-9882456)
chr7 (90-191)||(46405447-46405548)
chr7 (83-155)||(43187356-43187428)
chr7 (114-191)||(25805775-25805862)
chr7 (149-191)||(17001098-17001140)
chr7 (93-191)||(33892269-33892367)
chr7 (149-191)||(47066787-47066829)
chr7 (220-287)||(48117746-48117813)
chr7 (209-287)||(17001165-17001243)
chr7 (209-287)||(29893061-29893139)
chr7 (209-287)||(32143061-32143139)
chr7 (141-283)||(33382621-33382770)
chr7 (159-191)||(7993225-7993257)
chr7 (159-191)||(10676505-10676537)
chr7 (141-191)||(18838472-18838522)
chr7 (90-156)||(18838517-18838583)
chr7 (224-287)||(29585495-29585558)
chr7 (209-284)||(39028080-39028155)
chr7 (209-243)||(39219518-39219552)
chr7 (111-156)||(12963829-12963874)
chr7 (209-287)||(28034947-28035025)
chr7 (100-156)||(10617046-10617102)
chr7 (251-287)||(12963681-12963717)
chr7 (159-191)||(44256851-44256883)
[»] chr1 (52 HSPs)
chr1 (59-282)||(21222131-21222371)
chr1 (59-287)||(19451784-19452029)
chr1 (83-287)||(33025491-33025703)
chr1 (59-284)||(50192526-50192769)
chr1 (59-287)||(45759985-45760231)
chr1 (59-287)||(28824349-28824593)
chr1 (59-287)||(49198245-49198489)
chr1 (83-283)||(35279655-35279872)
chr1 (83-287)||(35679128-35679349)
chr1 (83-281)||(6304252-6304468)
chr1 (59-282)||(47654327-47654568)
chr1 (83-287)||(45535923-45536150)
chr1 (59-287)||(47780690-47780935)
chr1 (88-287)||(49418063-49418279)
chr1 (141-287)||(730127-730281)
chr1 (83-287)||(29556083-29556305)
chr1 (209-287)||(953798-953876)
chr1 (83-156)||(37014640-37014713)
chr1 (93-156)||(32588963-32589026)
chr1 (209-287)||(22183349-22183427)
chr1 (60-191)||(31572174-31572315)
chr1 (83-188)||(48668785-48668890)
chr1 (123-191)||(955832-955900)
chr1 (90-287)||(38536106-38536310)
chr1 (90-287)||(38558324-38558528)
chr1 (90-287)||(28387400-28387614)
chr1 (83-156)||(9577432-9577505)
chr1 (94-287)||(5495117-5495317)
chr1 (91-287)||(46328021-46328234)
chr1 (149-287)||(18798470-18798615)
chr1 (90-191)||(29219368-29219469)
chr1 (141-286)||(51701560-51701712)
chr1 (90-287)||(25612136-25612350)
chr1 (117-188)||(47784471-47784542)
chr1 (159-287)||(49230865-49231000)
chr1 (112-287)||(48524298-48524490)
chr1 (90-191)||(6312656-6312767)
chr1 (251-287)||(14494188-14494224)
chr1 (90-191)||(29396395-29396506)
chr1 (93-184)||(45272675-45272765)
chr1 (220-287)||(15835207-15835274)
chr1 (90-156)||(48177469-48177535)
chr1 (209-287)||(8141271-8141349)
chr1 (209-286)||(37014783-37014860)
chr1 (90-191)||(9322507-9322618)
chr1 (60-120)||(48524805-48524865)
chr1 (90-156)||(15835060-15835126)
chr1 (141-191)||(31622527-31622577)
chr1 (159-191)||(9577518-9577550)
chr1 (159-191)||(32589039-32589071)
chr1 (251-287)||(47784408-47784444)
chr1 (159-191)||(48177548-48177580)
[»] scaffold0004 (1 HSPs)
scaffold0004 (83-287)||(102079-102302)
[»] scaffold0037 (1 HSPs)
scaffold0037 (86-287)||(100197-100415)
[»] scaffold0151 (1 HSPs)
scaffold0151 (59-243)||(38581-38781)
[»] scaffold0113 (1 HSPs)
scaffold0113 (83-287)||(38895-39116)
[»] scaffold0276 (1 HSPs)
scaffold0276 (84-287)||(540-760)
[»] scaffold0347 (1 HSPs)
scaffold0347 (83-172)||(14878-14967)
[»] scaffold0306 (1 HSPs)
scaffold0306 (90-287)||(13868-14072)
[»] scaffold0152 (1 HSPs)
scaffold0152 (90-287)||(21255-21459)
[»] scaffold0543 (2 HSPs)
scaffold0543 (220-287)||(10546-10613)
scaffold0543 (90-191)||(10649-10760)
[»] scaffold0922 (1 HSPs)
scaffold0922 (150-287)||(4186-4330)
[»] scaffold0651 (1 HSPs)
scaffold0651 (251-287)||(8748-8784)
[»] scaffold1504 (2 HSPs)
scaffold1504 (90-156)||(997-1063)
scaffold1504 (209-287)||(849-927)
[»] scaffold0110 (1 HSPs)
scaffold0110 (90-156)||(39624-39690)
[»] scaffold0054 (2 HSPs)
scaffold0054 (90-156)||(36914-36980)
scaffold0054 (251-287)||(37050-37086)
[»] scaffold0042 (2 HSPs)
scaffold0042 (90-156)||(58083-58149)
scaffold0042 (141-191)||(58144-58194)
[»] scaffold0010 (2 HSPs)
scaffold0010 (251-287)||(233723-233759)
scaffold0010 (251-287)||(234571-234607)


Alignment Details
Target: chr8 (Bit Score: 119; Significance: 8e-61; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 41479318 - 41479083
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt 158  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||     
T  41479318 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaaaatctg 41479219  T
Q  159 atttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnna 251  Q
    ||||||||||||||| |||||||||||||||       |||||| |||||       |||||||||||||||||||||||||||||||||||       |    
T  41479218 atttattaaacaatcattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagacttttttta 41479119  T
Q  252 aatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41479118 aatgacaaagaatcttgattgaataacacaaaactt 41479083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 24501788 - 24502033
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  24501788 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 24501887  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  24501888 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 24501987  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||| ||||||||||||||||||||||||||||||    
T  24501988 actttttttaaatgataaagaatcttgattgaataacacaagactt 24502033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 83 - 282
Target Start/End: Original strand, 26374429 - 26374645
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||||||||||||||||||    
T  26374429 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 26374528  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  26374529 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 26374628  T
Q  266 ttgattgaataacacaa 282  Q
    |||||||||||||||||    
T  26374629 ttgattgaataacacaa 26374645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 2704794 - 2705039
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc-- 156  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||||      
T  2704794 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatcca 2704893  T
Q  157 --------ttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
            | ||||||||||||||| |||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  2704894 tcaaaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 2704993  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  2704994 actttttttaaatgacaaagaatcttgattgaataacacaagactt 2705039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 42938116 - 42938337
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  42938116 caatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42938215  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||| ||||    
T  42938216 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataatc 42938315  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  42938316 ttgattgaataacacaagactt 42938337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 42735252 - 42735497
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||             
T  42735252 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatcca 42735351  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||| ||||||||||||||||       ||||||||||||       ||||||||||||||||| |||||||||||||||    
T  42735352 tcaaaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacaag 42735451  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
     |       |||||| ||||||||||||||||||||||||||||||    
T  42735452 tctttttttaaatgataaagaatcttgattgaataacacaagactt 42735497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 23115168 - 23115388
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    |||||||||| ||||||||||||| |||||||||||||| |||| ||||||| | |||||||||||||||||||          | ||||||||||||||    
T  23115168 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 23115267  T
Q  173 ccttcgaaatttgaatgat------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 266  Q
    ||||| |||||||||||||      ||||||||||       |||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  23115268 ccttccaaatttgaatgatttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacattttttaaatgacaaagaatct 23115367  T
Q  267 tgattgaataacacaagactt 287  Q
    |||||||||||||||||||||    
T  23115368 tgattgaataacacaagactt 23115388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 42937582 - 42937339
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          
T  42937582 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatcca 42937483  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||  ||||||||||||||||    
T  42937482 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc--gattgaataccacaag 42937385  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||| ||||||||||||||||||||||||||    
T  42937384 actttttttaaatgacaaaaaatcttgattgaataacacaagactt 42937339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 43959878 - 43959644
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt 158  Q
    |||||||||||||||||       ||||| |||||||||||||||||| || ||||||||||| |||||||||||| || | |||||||  ||||||||     
T  43959878 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttcaccacaaaatccatcaaaatctg 43959779  T
Q  159 atttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnna 251  Q
    ||||||||||||||| |||||||||||||||       |||||||||| |       |||||||||||| ||||||||||||| ||||||||       |    
T  43959778 atttattaaacaatcattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata-cacaagacttttttaa 43959680  T
Q  252 aatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||||||||||||||||    
T  43959679 aatgacaaagaatcttgattgaataacacaagactt 43959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 282
Target Start/End: Original strand, 7506874 - 7507114
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||  |||||||||||||| |||||||||||| ||||||||||||||             
T  7506874 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7506973  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| ||||||||||||||||||| |||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  7506974 tcaaaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 7507073  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
    ||       ||||||||| |||||| |||||||||||||||    
T  7507074 acttttcttaaatgacaaggaatctcgattgaataacacaa 7507114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 32711305 - 32711502
Alignment:
Q  95 atctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat--- 191  Q
    ||||| |||||| |||||||||||||| |||||||||||| | ||||   | ||||||||||| |||||||||||||||||||||||||| ||||||       
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatttcaatagat--ttccacaaaatctgatttattaaacaatccttcgaaatttaaatgatttt 32711402  T
Q  192 ----accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
        ||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  32711403 gaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactt 32711502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 5576595 - 5576841
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||             
T  5576595 tagtaaaatcttaaaaggaaaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 5576694  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 240  Q
     ||||||||  ||||||||||||| ||||||||||||||||       |||||||| |||        ||||||||||||||||||||||||||||||||    
T  5576695 tcaaaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaataccacaa 5576794  T
Q  241 gacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||       |||||||||||||||||||||||||||||||||||||    
T  5576795 gactttttttaaatgacaaagaatcttgattgaataacacaagactt 5576841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 284
Target Start/End: Original strand, 10392237 - 10392454
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatc 173  Q
    |||||||| |||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||          |||||||| |||||||||||||||    
T  10392237 aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 10392336  T
Q  174 cttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 266  Q
    ||||||||||||||||       ||||||||||||       |||||||||| ||||||||||||||| |||||||        ||||||||||||||||    
T  10392337 cttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaatatcacaagaattttttaaaatgacaaagaatct 10392436  T
Q  267 tgattgaataacacaaga 284  Q
    ||||||||||||| ||||    
T  10392437 tgattgaataacataaga 10392454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 18305977 - 18306181
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  18305977 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatctttcgaaatttgaatg 18306076  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  18306077 attttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 18306176  T
Q  283 gactt 287  Q
    |||||    
T  18306177 gactt 18306181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 7466525 - 7466321
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||  |||||||||||||| |||| |||||||||||    
T  7466525 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaattcttcaaaatttgaatg 7466426  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||| ||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  7466425 attttgaataccacaagactttttttaagcgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 7466326  T
Q  283 gactt 287  Q
    |||||    
T  7466325 gactt 7466321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 284
Target Start/End: Complemental strand, 32497715 - 32497514
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| |||||||||||| |  || |||||||  |||| ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  32497715 aagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatcattcgaaatttgaatg 32497616  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| | ||||||||||| |||||    
T  32497615 attttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtattgattgaataccacaa 32497516  T
Q  283 ga 284  Q
    ||    
T  32497515 ga 32497514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 284
Target Start/End: Complemental strand, 16362386 - 16362185
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| ||||||| ||||| |||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||||||||||||||||    
T  16362386 aagaaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 16362287  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       |||| || || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  16362286 attttgaataccacgagactttttttaagtaatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaatatcacaa 16362187  T
Q  283 ga 284  Q
    ||    
T  16362186 ga 16362185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 9770439 - 9770503
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcc 147  Q
    |||||||||||||||||||||||| |||||| | ||||||||| |||||||| | ||||||||||    
T  9770439 caatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 42305801 - 42306005
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaat- 188  Q
    |||||||||||| |||| ||||| ||||||||  || |||||||  |||| |||||||   ||||||  ||| ||||||||||||||||||||||||||     
T  42305801 aagaaatctcattttttcatgaatgactttttcttgttaaaattacactacaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaatt 42305900  T
Q  189 ------gataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| |||        || |||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  42305901 attttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 42306000  T
Q  283 gactt 287  Q
    |||||    
T  42306001 gactt 42306005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 4403314 - 4403196
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaat----------cttatttattaaacaat 172  Q
    |||||| |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||||||||          |  ||||||||||||||    
T  4403314 caatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaat 4403215  T
Q  173 ccttcgaaatttgaatgat 191  Q
    |||||||||||||||||||    
T  4403214 ccttcgaaatttgaatgat 4403196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 9288463 - 9288677
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  |||||||||||||||||||||    
T  9288463 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 9288562  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       ||||||| || | | ||||||||||||| ||||||       |||||||||||| |||||||||    
T  9288563 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaatttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 9288662  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  9288663 aatatcacaagactt 9288677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 14782141 - 14782355
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  ||||||||||||||||||| |    
T  14782141 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14782240  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  14782241 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 14782340  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  14782341 aataccacaagactt 14782355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 39467553 - 39467688
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnna 251  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||||       |    
T  39467553 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaa 39467652  T
Q  252 aatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||| ||||||||||||| ||||||||||    
T  39467653 aatgacaaagagtcttgattgaataccacaagactt 39467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 44725816 - 44726030
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  ||||||||||||||||||| |    
T  44725816 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 44725915  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  44725916 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 44726015  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  44726016 aataccacaagactt 44726030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 19717887 - 19718101
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc--tta--------tttattaaacaatccttcga 179  Q
    |||||||||||| |||| || |||||||||||  || |||||||  |||| ||||||||||||||||  |||        ||||||||||||| ||||||    
T  19717887 aagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaattcttcga 19717986  T
Q  180 aatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  19717987 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 19718086  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  19718087 aataccacaagactt 19718101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 276
Target Start/End: Complemental strand, 31623826 - 31623692
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
    ||||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || ||||||||||||||||| ||||    
T  31623826 acaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaag 31623727  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaata 276  Q
    ||       |||||||||||| |||||||||||||    
T  31623726 acttttttaaaatgacaaagagtcttgattgaata 31623692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 287
Target Start/End: Original strand, 4031333 - 4031478
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
    ||||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       || | || || ||||||||||||||||| ||||    
T  4031333 acaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaatttatgaaaagtcttgattgaatacctcaag 4031432  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||| ||||||||||||| ||||||||||    
T  4031433 acttttttaaaatgacaaagattcttgattgaataccacaagactt 4031478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 37857309 - 37857209
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| |||||||| |||||  || | |||||  |||| |||||||  |||||||  ||||||||||||||||||  |||||||||||    
T  37857309 aagaaatctcatcttttcatgaaagattttttcttgttcaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttaaaatttgaatg 37857210  T
Q  190 a 190  Q
    |    
T  37857209 a 37857209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 39189815 - 39189931
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc-------tt--atttattaaacaatc 173  Q
    |||||| ||||||||||||||||| |||||||| |||||  || |||||||| |||||||||| |  |||||||       ||  |||||||||||||||    
T  39189815 caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccatcaaattcaatttattaaacaatc 39189913  T
Q  174 cttcgaaatttgaatgat 191  Q
    ||||||||||||||||||    
T  39189914 cttcgaaatttgaatgat 39189931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 287
Target Start/End: Original strand, 18958812 - 18958947
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnna 251  Q
    |||||||||||||||||||||||||||||||       ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |    
T  18958812 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaa 18958911  T
Q  252 aatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||| ||||| ||||||||||||| ||||||||||    
T  18958912 aatgataaagagtcttgattgaataccacaagactt 18958947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 10295448 - 10295498
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  10295448 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgat 10295498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 43166757 - 43166807
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  43166757 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgat 43166807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 4950021 - 4950085
Alignment:
Q  89 taagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaa 153  Q
    |||||||||| ||||||  |||||| | ||||| |||||||||||| |||||||||| |||||||    
T  4950021 taagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaa 4950085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 10295386 - 10295450
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaa 154  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||    
T  10295386 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaa 10295450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 13478317 - 13478360
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaattt 184  Q
    ||||||| || |||||| ||||||||||||||||||||||||||    
T  13478317 aaaatccaacgaaatctaatttattaaacaatccttcgaaattt 13478360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 26856206 - 26856156
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||||| ||||||||||||||||||    
T  26856206 aaaatccatcaaaatccaatttattaaacaatacttcgaaatttgaatgat 26856156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 26856267 - 26856201
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||| || ||||| |||||||||||||  || |||||||  |||| ||||||||||||||||    
T  26856267 aagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 26856201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 43166809 - 43166868
Alignment:
Q  228 ttgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||       |||||||||||| ||||||||||||| ||||||||||    
T  43166809 ttgaataccacaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 43166868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 7e-55; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 60 - 287
Target Start/End: Original strand, 31314719 - 31314949
Alignment:
Q  60 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctta 159  Q
    ||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |    
T  31314719 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctga 31314818  T
Q  160 tttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaa 252  Q
    ||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||    ||||||||||||||||       ||    
T  31314819 tttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc----ttgaataccacaagactttttttaa 31314914  T
Q  253 atgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||| |||||||||||||||    
T  31314915 atgacaaagaatcttgattaaataacacaagactt 31314949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 83 - 284
Target Start/End: Original strand, 46635648 - 46635860
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----aatcttatttattaaacaatccttcg 178  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||    ||||||||||||||||||||||||||    
T  46635648 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcaatcttatttattaaacaatccttcg 46635747  T
Q  179 aaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgatt 271  Q
    |||||||||||       |||| |||| ||       |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  46635748 aaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 46635847  T
Q  272 gaataacacaaga 284  Q
    |||||| ||||||    
T  46635848 gaataatacaaga 46635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 25331361 - 25331116
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          
T  25331361 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 25331262  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||| ||||||||||||       ||| ||||||||       |||||||||||||||||||||||||||||||||    
T  25331261 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacaag 25331162  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  25331161 actttttttaaatgacaaagaatcttgattgaataacacaagactt 25331116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 24130957 - 24131193
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagactttttt-atgctaaaattttactagaaaatcccacaaaatc- 156  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||| |||||| || ||||||||| |||||||||||||||||||||     
T  24130957 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatcc 24131056  T
Q  157 ---------ttatttattaaacaatccttcgaaatttgaatgataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnn 247  Q
             | ||||||||||||||| ||||||||||||||   ||||||||||       |||||||||||||||||||||||||||||||||||        
T  24131057 atcaaaatctgatttattaaacaatcattcgaaatttgaat---accactagactttttttaagtgattaagagtcttgattgaataccacaagactttt 24131153  T
Q  248 nnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
       |||||||||||||||||||||||||||||||||||||    
T  24131154 tttaaatgacaaagaatcttgattgaataacacaagactt 24131193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 41881082 - 41881304
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  41881082 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 41881181  T
Q  173 ccttcgaaatttgaatg-------ataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 264  Q
    |||||||||||||||||       ||||||||| ||        |||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  41881182 ccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 41881281  T
Q  265 cttgattgaataacacaagactt 287  Q
    |||||||||||||||||||||||    
T  41881282 cttgattgaataacacaagactt 41881304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 55303049 - 55302828
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  55303049 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaat 55302950  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||||||| |||       |||||||||||||||    
T  55302949 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgacttttttaaaatgacaaagaatc 55302850  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||| ||||||||||||    
T  55302849 ttgattgaaaaacacaagactt 55302828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 12113151 - 12112930
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||          | ||||||||||||||    
T  12113151 caatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaat 12113052  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||||       |||| |||||       |||||||||||||| ||||||||||||||||||||       |||||||||||||||    
T  12113051 ccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagaatc 12112952  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  12112951 ttgattgaataacacaagactt 12112930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 22202221 - 22202000
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    |||| ||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||          ||||||||||||||||    
T  22202221 caatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaat 22202122  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    | || ||||||| ||||||       ||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  22202121 cttttgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 22202022  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  22202021 ttgattgaataacacaagactt 22202000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 84 - 287
Target Start/End: Original strand, 32950837 - 32951057
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatc 173  Q
    |||| |||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||          |||||||| |||||||||||||||    
T  32950837 aatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatc 32950936  T
Q  174 cttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 266  Q
    ||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||||||| |||       |||||||||| |||||    
T  32950937 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacaaataatct 32951036  T
Q  267 tgattgaataacacaagactt 287  Q
    |||||||||||||||||||||    
T  32951037 tgattgaataacacaagactt 32951057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 287
Target Start/End: Complemental strand, 1045035 - 1044794
Alignment:
Q  61 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa-------- 152  Q
    |||||||||||||||       |||| ||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||||||            
T  1045035 gtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 1044936  T
Q  153 --aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 243  Q
      ||||| ||||||||||||||||||||||| |||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||    
T  1044935 aaaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 1044836  T
Q  244 nnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
           ||||||||| |||||||||||||||||||||||||||    
T  1044835 --tttttaaatgacaaggaatcttgattgaataacacaagactt 1044794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 1113099 - 1112878
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||          ||||| ||||||||||||||    
T  1113099 caatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaat 1113000  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    | || ||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  1112999 catttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 1112900  T
Q  266 ttgattgaataacacaagactt 287  Q
    |||||||||||| |||| ||||    
T  1112899 ttgattgaataatacaatactt 1112878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 7007580 - 7007359
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaat----------cttatttattaaacaat 172  Q
    ||||| |||||||||||||||||| |||||| |  |||| |||||||||||| ||||||||||||||||||||          || ||||||||||||||    
T  7007580 caatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaat 7007481  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||||       ||||||||||       ||||||||||||||||||||||||||||||| |||       |||||||| ||||||    
T  7007480 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacagagaatc 7007381  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  7007380 ttgattgaataacacaagactt 7007359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 37046450 - 37046673
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaatttt-actagaaaatcccacaaaatc----------ttatttattaaacaa 171  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||          | |||||||||||||    
T  37046450 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaa 37046549  T
Q  172 tccttcgaaatttgaatgat-------accactagacnnnnnnn-aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaa 263  Q
    ||||||||||||||||||||       | ||||||||        |||||||||||||||||||||||||||||||| ||       |||||||||||||    
T  37046550 tccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccacaaaactttttttaaatgacaaagaa 37046649  T
Q  264 tcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||||    
T  37046650 tcttgattgaataacacaagactt 37046673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 287
Target Start/End: Original strand, 40537161 - 40537366
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatt 183  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| || | |||||||  |||||||  ||||||||||||||| |||||||||    
T  40537161 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcaccacaaaatccatcaaaatcagatttattaaacaatcattcgaaatt 40537260  T
Q  184 tgaatga-taccacta-gacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacaca 281  Q
    | ||||| |   | ||  ||       |||||||||||||| ||||||||||||||||||||       |||||||||||| ||||||||||||||||||    
T  40537261 taaatgattttgaataccacattttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagagtcttgattgaataacaca 40537360  T
Q  282 agactt 287  Q
    ||||||    
T  40537361 agactt 40537366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 30009653 - 30009898
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||             
T  30009653 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcca 30009752  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| ||||||||||||||| ||  |||||| ||||       ||||||||||||       ||||||||||||||||||||||||||||||| |    
T  30009753 tcaaaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacagg 30009852  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||| ||||||| |||||| |||||||||||||||    
T  30009853 actttttttaaatgataaagaattttgattaaataacacaagactt 30009898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 281
Target Start/End: Original strand, 34228559 - 34228798
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |             
T  34228559 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 34228658  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| ||||||||||||||| |||||||||| ||||       ||||||||||||       |||||||||||| | |||||||||||||||| |    
T  34228659 tcaaaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattgaataccacatg 34228758  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacaca 281  Q
    ||       |||||||||||||||||||||||||||||||    
T  34228759 actttttttaaatgacaaagaatcttgattgaataacaca 34228798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 287
Target Start/End: Original strand, 39479332 - 39479578
Alignment:
Q  60 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca---------- 149  Q
    ||||||||||||||||       |||||||||||||||||||| ||| ||||||||||||||  ||||||||||| ||||||||||||||              
T  39479332 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccat 39479431  T
Q  150 caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagac--nnnnnnnaagtgattaagagtcttgattgaataccacaa 240  Q
    |||||||| |||||||||||||| ||||||||||||||||       ||||||| || |         ||||||||||||||||||||||||||||||||    
T  39479432 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgattgaataccacaa 39479531  T
Q  241 gacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||       ||||||||| |||||||||||||||||||||||||||    
T  39479532 gactttttttaaatgacaaggaatcttgattgaataacacaagactt 39479578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 56445362 - 56445463
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||||| |||||||||||||||||  ||||||| ||| |||||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  56445362 aagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatccaatttattaaacaatcattcgaaatttgaatg 56445461  T
Q  190 at 191  Q
    ||    
T  56445462 at 56445463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 243
Target Start/End: Complemental strand, 42786890 - 42786713
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    ||||| |||||||||||||||||| |||||||||||||||||| |||||||| |||||||||| ||||||||||          | ||||||||||||||    
T  42786890 caatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaat 42786791  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 243  Q
    |||||||||||||||||       ||||||||||||       || ||||||||||||||||||||||||||||||||    
T  42786790 ccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagac 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 28541836 - 28541683
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||| ||||||||||||||| |||||||||||||||||       ||||||||||       |||||||||||||||||||||||||    
T  28541836 aaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat 28541737  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||| ||||       |||||||||||||||||||||||||||||||||||||    
T  28541736 accacgagactttttttaaatgacaaagaatcttgattgaataacacaagactt 28541683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 12913413 - 12913312
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||||| || |||||| |||||||  || |||||||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatccaatttattaaacaatccttcaaaatttgaatg 12913314  T
Q  190 at 191  Q
    ||    
T  12913313 at 12913312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 108 - 287
Target Start/End: Original strand, 19740933 - 19741129
Alignment:
Q  108 atgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaatccttcgaaatttgaatgat------ 191  Q
    |||||||||||||| | |||||||||| |||||||||||||||||||||          | |||||||||||||||||||||||||||||||||          
T  19740933 atgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgatttttaa 19741032  T
Q  192 -accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
     ||||| ||||       |||||||||| |||||||| ||||||||||| |||       |||||||||||||||||||||||||||||||||||||    
T  19741033 taccacaagactttttttaagtgattaaaagtcttgactgaataccacatgactttttataaatgacaaagaatcttgattgaataacacaagactt 19741129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 23987403 - 23987199
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||| |||||||||||||||||||||||||||||||    
T  23987403 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatg 23987304  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||| ||||||||||||| ||||||       |||||||||||| | ||||||||||| |||||    
T  23987303 attttgaataccacaagactttttttaagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtattgattgaataccacaa 23987204  T
Q  283 gactt 287  Q
    |||||    
T  23987203 gactt 23987199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 41321038 - 41320898
Alignment:
Q  61 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa-------- 152  Q
    |||||||||||||||       ||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||||| |||||||||            
T  41321038 gtaaaatcttaaaagaaaaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatc 41320939  T
Q  153 --aatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
      ||||| |||||||||||||||||||||||||||||||||    
T  41320938 aaaatctgatttattaaacaatccttcgaaatttgaatgat 41320898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 11090510 - 11090428
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttatt 165  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||||  |||||||    
T  11090510 caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatccaatttatt 11090428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 36479249 - 36479346
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaat 188  Q
    ||||||||||||||||| || |||||||||||| ||||||||||| |||| |||||||  |||||||  |||||||||| |||||||||||||||||||    
T  36479249 aagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-aaaatccatcaaaatccaatttattaaataatccttcgaaatttgaat 36479346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 287
Target Start/End: Complemental strand, 25446227 - 25446036
Alignment:
Q  112 aagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaatccttcgaaatttgaatg-------atacc 194  Q
    |||||||||| |||||||||||| |||| ||||||||||||          ||||| ||||||||||||||| |||||||||||||||       |||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  195 actagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||       ||||||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||| |||||||||    
T  25446127 actagactttttttaagtgattaagagtcttgattgaataccacaagaatttttttaaatgacaaa-aatcttgattgaataatacaagactt 25446036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 282
Target Start/End: Complemental strand, 3436823 - 3436583
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccaca------- 151  Q
    |||||||||||||||||       |||| ||||||||||| ||||||| |||||| ||||||| ||| |||||||| |||| |||||||||||           
T  3436823 tagtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattca 3436724  T
Q  152 ---aaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
       |||||| |||||||||||||||||||||||||||||||       |||||| ||||        || ||||||||||||||||||||||| ||||||    
T  3436723 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattgaatatcacaag 3436624  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
    |        ||| |||||| |||||||||||||||||||||    
T  3436623 attttttttaaacgacaaaaaatcttgattgaataacacaa 3436583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 30967316 - 30967520
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    ||||||||| || |||| |||||||| |||||  || |||||||  |||| ||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  30967316 aagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatcctttgaaatttgaatg 30967415  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || | ||||||||||||||| ||| ||       |||||||||||| ||||||||||||| |||||    
T  30967416 attttgaataccacaagactttttttaagtgatgaaaaatcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaa 30967515  T
Q  283 gactt 287  Q
    |||||    
T  30967516 gactt 30967520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 284
Target Start/End: Complemental strand, 53276046 - 53275827
Alignment:
Q  83 caatcctaagaaatctcatgttttta-tgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaa 171  Q
    ||||||||| |||||| | ||||||| ||||||||||||| |||||||||||||| ||||||||| ||          |||||||| |||||||| ||||    
T  53276046 caatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaa 53275947  T
Q  172 tccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 264  Q
    ||||||||||||||||||       ||| ||||||||       |||||||||| | |||||||||||||| |||||||       |||||||||| |||    
T  53275946 tccttcgaaatttgaatgattttaaatatcactagactttttttaagtgattaaaaatcttgattgaatactacaagactttttttaaatgacaaataat 53275847  T
Q  265 cttgattgaataacacaaga 284  Q
    ||| ||||||||||||||||    
T  53275846 ctttattgaataacacaaga 53275827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 23465093 - 23464940
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||| ||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||    
T  23465093 aaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttattttaagtgattaagagtcttgattgaat 23464994  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |  |||| ||       ||||||||| ||||||||||||||||| |||||||||    
T  23464993 attacaaaactttttttaaatgacaaggaatcttgattgaataatacaagactt 23464940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 25504707 - 25504860
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||       ||| |||| |||       |||||||||||||||||||||||||    
T  25504707 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagtcttgattgaat 25504806  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    | |||||||        ||||||  |||||||||||||||||||||||||||||    
T  25504807 atcacaagaatttttttaaatgatcaagaatcttgattgaataacacaagactt 25504860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 49501526 - 49501629
Alignment:
Q  90 aagaaatctcatgtttttat--gaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaa 187  Q
    |||||||||||| |||||||  ||||||||||||  || |||||||  |||| ||||| ||||||||||  ||||||||||||||| |||||||||||||    
T  49501526 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccaatttattaaacaatcattcgaaatttgaa 49501625  T
Q  188 tgat 191  Q
    ||||    
T  49501626 tgat 49501629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 49507591 - 49507694
Alignment:
Q  90 aagaaatctcatgtttttat--gaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaa 187  Q
    |||||||||||| |||||||  ||||||||||||  || |||||||  |||| ||||| ||||||||||  ||||||||||||||| |||||||||||||    
T  49507591 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccaatttattaaacaatcattcgaaatttgaa 49507690  T
Q  188 tgat 191  Q
    ||||    
T  49507691 tgat 49507694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 8712065 - 8711999
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||| |||| ||||||||||||||||    
T  8712065 aagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatc 8711999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 39307253 - 39307325
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaat 155  Q
    |||| |||||||||||||||||||||| | | ||||||| ||| |||||||| ||||||||||||||||||||    
T  39307253 caattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaat 39307325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 5441603 - 5441389
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  5441603 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 5441504  T
Q  180 aatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  5441503 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 5441404  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  5441403 aataccacaagactt 5441389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 27768255 - 27768041
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  27768255 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 27768156  T
Q  180 aatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  27768155 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 27768056  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  27768055 aataccacaagactt 27768041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 28484093 - 28483987
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatt 183  Q
    |||| ||||||||||| | |||| ||||||||||||||  || |||| ||  |||| ||||||| ||||||||  |||||||||| ||||||||||||||    
T  28484093 aatcttaagaaatctcgtcttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatccaatttattaaataatccttcgaaatt 28483995  T
Q  184 tgaatgat 191  Q
    ||||||||    
T  28483994 tgaatgat 28483987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 7249795 - 7249883
Alignment:
Q  113 agacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||| |||||||||||| |||||||||||||||||||||          | |||||||||||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgat 7249883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 287
Target Start/End: Original strand, 49834889 - 49835034
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
    ||||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || ||||||||||||||||| ||||    
T  49834889 acaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaag 49834988  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
     |       |||||||||||| ||||||||||||| ||||||||||    
T  49834989 cctttgttaaaatgacaaagagtcttgattgaataccacaagactt 49835034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 51321059 - 51320906
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || ||||||||||||||    
T  51321059 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 51320960  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||||| ||||||||||||| ||||| ||||    
T  51320959 acctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactt 51320906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 54341343 - 54341129
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  54341343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 54341244  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  54341243 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 54341144  T
Q  273 aataacacaagactt 287  Q
    |||| || |||||||    
T  54341143 aataccataagactt 54341129  T

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Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 5800164 - 5800066
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||| || |||| || |||||||||||  || |||||||   ||| |||||| |||||||||  |||||||||||||||||| ||||||||||||||    
T  5800164 aaatcttatcttttcattaaagactttttcttgttaaaattactctacaaaatctcacaaaatccaatttattaaacaatcctttgaaatttgaatgat 5800066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 24736534 - 24736468
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||||||||||| ||||||||||| ||  || |||||||| ||||||||||| |||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatc 24736468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 7249923 - 7249993
Alignment:
Q  217 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| |||||||||||||        ||||||| |||||||||||||||||||||||||||||    
T  7249923 aagagtcttgatcgaataccacaagatattttttaaatgactaagaatcttgattgaataacacaagactt 7249993  T

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Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 9163214 - 9163061
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||| | |||||||||||||||||||||||||||||||||       | ||| ||||       | ||||| || | ||||||||||||    
T  9163214 aaaatccatcaaaatttaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttatgtgatgaaaaatcttgattgaat 9163115  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||       |||||||||||| ||||||||||||| ||||||||||    
T  9163114 accacaagactttttttaaatgacaaagagtcttgattgaataccacaagactt 9163061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 37915965 - 37915812
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || ||||||||||||||    
T  37915965 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 37915866  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||| | ||| ||||||||||||| ||||||||||    
T  37915865 acctcaagacttttttaaaatgatagagagtcttgattgaataccacaagactt 37915812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 27454078 - 27454150
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaat 155  Q
    ||||| ||| |||| | ||||||| |||||||||||||| |||| ||||||| |||||||||| |||||||||    
T  27454078 caatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaat 27454150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 32322290 - 32322179
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc--------tt--atttattaaacaatccttcga 179  Q
    |||||||||||| |||||||||||||| ||||  |  |||||||  |||| ||||||||||||||||        ||  |||||||||||||||||||||    
T  32322290 aagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 32322191  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  32322190 aatttgaatgat 32322179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 41581795 - 41581862
Alignment:
Q  89 taagaaatctcatgtttttatgaaagactttttt-atgctaaaattttactagaaaatcccacaaaat 155  Q
    |||||||||||||||||  |||||| | |||||| ||| |||||||| ||||||||||||||||||||    
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaat 41581862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 32684064 - 32684106
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  32684064 acaaaatccaatttattaaacaatccttcgaaatttgaatgat 32684106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 284
Target Start/End: Original strand, 37828470 - 37828620
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||       ||||| ||||       || |||| || | ||||||||||||    
T  37828470 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaat 37828569  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaaga 284  Q
    ||| ||||||       |||||||||||| ||||||||||||| |||||||    
T  37828570 acctcaagactttttaaaaatgacaaagagtcttgattgaataccacaaga 37828620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 41320769 - 41320735
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagac 285  Q
    |||||||||||||||||||||||||||||||||||    
T  41320769 aaatgacaaagaatcttgattgaataacacaagac 41320735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 50018437 - 50018339
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||| ||||  |||||||||||||  || |||||||  |||| |||||||   |||||   ||||||||||||||||||| |||||||||||||    
T  50018437 aaatctcatcttttcttgaaagactttttcttgttaaaattacactacaaaatccattaaaattcaatttattaaacaatccttcaaaatttgaatgat 50018339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 37828409 - 37828520
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  |  |||||||  |||| |||||||||          |||||||  |||||||||||||||||||||    
T  37828409 aagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 37828508  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  37828509 aatttgaatgat 37828520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 37915839 - 37915770
Alignment:
Q  218 agagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||||||       || ||||||| | ||||||||||||| ||||||||||    
T  37915839 agagtcttgattgaataccacaagactttttttaagtgacaaaaagtcttgattgaataccacaagactt 37915770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 44770862 - 44770926
Alignment:
Q  92 gaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||||||  | ||||||||||||||  |  |||||||| |||||||||||||||||||||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatc 44770926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 29649735 - 29649785
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  ||||||||||||||| |||||||||||||||||    
T  29649735 aaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgat 29649785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 32684133 - 32684208
Alignment:
Q  212 tgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||| || ||||||||||||||||| ||| ||       ||||||||||||||||| |||||||| ||||||||||    
T  32684133 tgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagaatcttaattgaataccacaagactt 32684208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 39307399 - 39307474
Alignment:
Q  212 tgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||| |||| ||||||||||||||||||||||       ||||| |||| ||||||||||||||| ||||| ||||    
T  39307399 tgatgaagaatcttgattgaataccacaagacttttttaaaatggcaaaaaatcttgattgaataccacaaaactt 39307474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 44770921 - 44770971
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  ||||||||||||||||||| |||||||||||||    
T  44770921 aaaatccaccaaaatccaatttattaaacaatccttcaaaatttgaatgat 44770971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 48261265 - 48261215
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  ||||||||||||||||||| |||||||||||||    
T  48261265 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgat 48261215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 48261326 - 48261260
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| |||||||| |||||  || |||||||  |||| ||||||||||||||||    
T  48261326 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatc 48261260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 54853475 - 54853541
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| |||||||| |||||  || |||||||  |||| ||||||||||||||||    
T  54853475 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatc 54853541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 20021407 - 20021329
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||||||||||||||||  |||||        |||||||||||||||||||||||||| ||||| ||||    
T  20021407 aagtgatgaaaagtcttgattgaatacttcaagatttttttaaaatgacaaagaatcttgattgaataccacaaaactt 20021329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 41725321 - 41725256
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaat 155  Q
    |||||||||||| |||| |||||||| |||||  || |||||||  |||| |||||||||||||||    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaat 41725256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 54853611 - 54853689
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||||||||||||||||  ||||||       |||||| ||||| ||||||||||||| ||||||||||    
T  54853611 aagtgatgaaaagtcttgattgaatacttcaagacttttttaaaatgaaaaagagtcttgattgaataccacaagactt 54853689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 44771039 - 44771075
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  44771039 aaatgacaaagagtcttgattgaatatcacaagactt 44771075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 19254033 - 19253812
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          ||||||||||||||||||||    
T  19254033 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 19253934  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  19253933 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 19253834  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  19253833 ttgattgaataacacaagactt 19253812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 20498439 - 20498194
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          
T  20498439 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20498340  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  20498339 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20498240  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||| ||||    
T  20498239 actttttttaaatgacaaagaatcttgattgaataacacaaaactt 20498194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 3999645 - 3999866
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  3999645 caatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3999744  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       |||||||||||        |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  3999745 ccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 3999844  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  3999845 ttgattgaataacacaagactt 3999866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 29448858 - 29449079
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||    
T  29448858 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 29448957  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||||||       |||||||| ||||||||||||||||| ||||||||       ||||||||| |||||    
T  29448958 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaatatcacaagactttttgtaaatgacaaggaatc 29449057  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  29449058 ttgattgaataacacaagactt 29449079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 996062 - 996307
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  996062 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 996161  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||| ||||||||||||||||||||    
T  996162 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 996261  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||| ||||||||||||||||||||||||||||||    
T  996262 acttttttgaaatgataaagaatcttgattgaataacacaagactt 996307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 10139122 - 10139367
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  10139122 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 10139221  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  10139222 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 10139321  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||| || |||||||||||||||||||||||||||    
T  10139322 actttttttaaatgataaggaatcttgattgaataacacaagactt 10139367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 37820453 - 37820698
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||             
T  37820453 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatcca 37820552  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||| ||||||||||||||||||||    
T  37820553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 37820652  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |        |||||||||||||||||||||||||||||||||||||    
T  37820653 aatttttttaaatgacaaagaatcttgattgaataacacaagactt 37820698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 33807798 - 33808020
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  33807798 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33807897  T
Q  173 ccttcgaaatttgaatg-------ataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 264  Q
    |||||||||||||||||       ||||||||||||        |||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  33807898 ccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 33807997  T
Q  265 cttgattgaataacacaagactt 287  Q
    ||| |||||||||||||||||||    
T  33807998 cttaattgaataacacaagactt 33808020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 6589770 - 6589549
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          ||||| |||||||||| |||    
T  6589770 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataat 6589671  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
     ||||||||||||||||       ||||||||||||       || ||||||||||||||||||||||||||||||||       ||||||||| ||||     
T  6589670 tcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagactttttttaaatgacaaggaata 6589571  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  6589570 ttgattgaataacacaagactt 6589549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 35337963 - 35337720
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc-- 156  Q
    |||||||||||||||||       ||||||||| |||||||||||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||      
T  35337963 tagtaaaatcttaaaagaaaaaaacaatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatcca 35337866  T
Q  157 --------ttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
            | ||||||||||||||||||||||||||||||        ||||||||||||       |||||||||||||||||||||||||||||||||    
T  35337865 tcaaaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 35337766  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       ||||||||| |||||||||||||||||||||||||||    
T  35337765 acttttttaaaatgacaaggaatcttgattgaataacacaagactt 35337720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 27899540 - 27899432
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    ||||| |||||||| ||||||||| |||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  27899540 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatctgatttattaaacaatccttcgaaat 27899441  T
Q  183 ttgaatgat 191  Q
    |||||||||    
T  27899440 ttgaatgat 27899432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 3206181 - 3206382
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||             
T  3206181 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 3206280  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  3206281 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 3206380  T
Q  242 ac 243  Q
    ||    
T  3206381 ac 3206382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 44762037 - 44762258
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||| |||||||||||||||||| || ||||||||||| |||||||||||| |||| |||||||||          |||||||| ||||||||||||||    
T  44762037 caatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44762136  T
Q  173 ccttcgaaatttgaat-------gataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    ||||||||| ||||||        ||||||||||||       ||||||||||||||||||||||||||| ||| |||       |||||||||||||||    
T  44762137 ccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaatactacatgactttttttaaatgacaaagaatc 44762236  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  44762237 ttgattgaataacacaagactt 44762258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 54625798 - 54625577
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    ||||| |||||||||||||||||| |||||| ||||||| |||||||||||| |||||||||||||||||          ||||| ||||||||||||||    
T  54625798 caatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 54625699  T
Q  173 ccttcgaaatttgaat-------gataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    ||||||||||||||||        ||||||||||||       ||||||||||||||||||||||||||| ||||||        ||||||||| ||||     
T  54625698 ccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagattttttttaaatgacaacgaata 54625599  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  54625598 ttgattgaataacacaagactt 54625577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 276
Target Start/End: Original strand, 33996547 - 33996751
Alignment:
Q  89 taagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccc----------acaaaatcttatttattaaacaatccttcg 178  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||           |||||||| ||||||||||||||||||||    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  179 aaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgatt 271  Q
    |||||||||||       |||||||| ||        |||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 33996746  T
Q  272 gaata 276  Q
    |||||    
T  33996747 gaata 33996751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 83 - 284
Target Start/End: Complemental strand, 40247050 - 40246832
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    ||||| |||| ||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||          ||||| ||||||||||||||    
T  40247050 caatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 40246951  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    ||||| |||||||||||       ||||||||||||       || ||||||| ||||||||||||||||||||| ||       |||||||||||||||    
T  40246950 ccttccaaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattgaataccacaaaactttttttaaatgacaaagaatc 40246851  T
Q  266 ttgattgaataacacaaga 284  Q
    |||||||||||||||||||    
T  40246850 ttgattgaataacacaaga 40246832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 25418572 - 25418351
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    |||||||||| ||||||||||||| |||||| ||||||| |||| ||||||| |||||||||||||||||||||          | ||||||||||||||    
T  25418572 caatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25418473  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    ||||  |||||||||||||       ||| |||||        |||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  25418472 cctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatc 25418373  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  25418372 ttgattgaataacacaagactt 25418351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 6035053 - 6035126
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6035053 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatc 6035126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 274
Target Start/End: Original strand, 53929128 - 53929336
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||||||| |||||||||||||| || ||||| ||||| |||||||||||| |||||||||||| |          |||||||||||||||||||||||    
T  53929128 caatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaaacaat 53929227  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    | ||||| |||| ||||       ||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  53929228 cgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 53929327  T
Q  266 ttgattgaa 274  Q
    |||||||||    
T  53929328 ttgattgaa 53929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 98 - 287
Target Start/End: Original strand, 51699495 - 51699700
Alignment:
Q  98 tcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcgaaatttgaa 187  Q
    ||||||||| | |||||| ||||| |||||||||||| ||||||||||||||          |||||||||||||||||| |||||||||||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  188 tg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacac 280  Q
    ||       |||||||||||        ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||| ||    
T  51699595 tgattttgaataccactaga-tttttttaagtgattaagagtcttgattgaataccacaagattttttttaaatgacaaagaatcttgattgaataatac 51699693  T
Q  281 aagactt 287  Q
    |||||||    
T  51699694 aagactt 51699700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 284
Target Start/End: Complemental strand, 52114734 - 52114516
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaa----------atcttatttattaaacaatc 173  Q
    ||||||||||||||||||||||| |  ||||| ||||| ||||||||||||||||||||||| |||||||          |||| |||||||||||||||    
T  52114734 aatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatctatcaaaatctgatttattaaacaatc 52114635  T
Q  174 cttcgaaatttgaat-------gataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    || ||||||||||||        ||||||||||||        |||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  52114634 ctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatc 52114535  T
Q  266 ttgattgaataacacaaga 284  Q
    ||| |||||||||||||||    
T  52114534 ttggttgaataacacaaga 52114516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 6131233 - 6131306
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  6131233 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatc 6131306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 52080117 - 52080015
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    |||||||||||||||||||||||| |      ||||||| |||||||||||| | |||||||||||||||||||| ||||||||||||||||||| ||||    
T  52080117 caatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatctgatttattaaacaatccttcaaaat 52080024  T
Q  183 ttgaatgat 191  Q
    |||||||||    
T  52080023 ttgaatgat 52080015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 10728658 - 10728862
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||  ||||||||||||||||||| |||||||||||    
T  10728658 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttccaaatttgaatg 10728757  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  10728758 attttaaataccacaagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 10728857  T
Q  283 gactt 287  Q
    |||||    
T  10728858 gactt 10728862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 282
Target Start/End: Complemental strand, 39038229 - 39038030
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaat- 188  Q
    |||||||||||| |||||||||||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||| |||||||||||||||     
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaattcttcgaaatttgaatg 39038130  T
Q  189 ------gataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
          |||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  39038129 attttggataccacaagacttttttaaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 39038030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 1440020 - 1440174
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||| |||||||||||||||||| ||||||||||||||       ||||||||||       |||||||||||||||||||||||||    
T  1440020 aaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaat 1440119  T
Q  234 accacaagacnnnnnnn-aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| ||        |||||||||||||||||||||||||||||||||||||    
T  1440120 accacaaaacttttttttaaatgacaaagaatcttgattgaataacacaagactt 1440174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 29030143 - 29029991
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||| ||||||||||||||||||| |||||||||||||       ||||| ||||       |||||||||||||||||||||||||    
T  29030143 aaaatccatcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttt-aagtgattaagagtcttgattgaat 29030045  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||       |||||||||||| |||| |||||||||||||||||||    
T  29030044 accacaagactttttttaaatgacaaagagtcttaattgaataacacaagactt 29029991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 39842494 - 39842602
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    |||||| |||||||||||| |||| ||||||||||||||  || |||||||  | || |||||||  |||||||| |||||||||||||| |||||||||    
T  39842494 caatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacattacaaaatccgtcaaaatctaatttattaaacaattcttcgaaat 39842593  T
Q  183 ttgaatgat 191  Q
    |||||||||    
T  39842594 ttgaatgat 39842602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 90 - 282
Target Start/End: Complemental strand, 37455050 - 37454851
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| |||||| |||||||  || |||||||  |||| |||||||||||||||   ||||||||||||||| |||||||||||||||    
T  37455050 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattcaatttattaaacaatcattcgaaatttgaatg 37454951  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       || |||| || ||||||||||||||| | ||||||       |||||||||||||||||||||||||| |||||    
T  37454950 attttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagaatcttgattgaataccacaa 37454851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 1439894 - 1439968
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatct 157  Q
    ||||||||| ||||||||||||||  ||||||||||||| || | ||||||||||||||||||||||||||||||    
T  1439894 caatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatct 1439968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 6975924 - 6975834
Alignment:
Q  101 tgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||| |||||||||| ||| ||||| ||||||||||||||||||||||||| ||  ||||| |||| ||| ||||||||||||||||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattccaatttagtaaataattcttcgaaatttgaatgat 6975834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 5825268 - 5825150
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatct----------tatttattaaacaat 172  Q
    ||||| |||||||||||||||||| ||||||| |||||| |||||| ||||| |||| |||||||||||||||||           ||||||||||||||    
T  5825268 caatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaat 5825169  T
Q  173 ccttcgaaatttgaatgat 191  Q
    ||||| |||||||||||||    
T  5825168 ccttcaaaatttgaatgat 5825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 44276580 - 44276489
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatcct 175  Q
    ||||| || ||||||||||| || |||||||| |||||  || |||||||| |||||||||||||||||||||  |||||||||||||||||    
T  44276580 aatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatccaatttattaaacaatcct 44276489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 287
Target Start/End: Original strand, 23753462 - 23753607
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
    ||||||||  |||||||||||||||||||||||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||    
T  23753462 acaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaag 23753561  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||| ||||||||||    
T  23753562 acttttttaaaatgacaaagaatcttgattgaataccacaagactt 23753607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 44906590 - 44906734
Alignment:
Q  150 caaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 242  Q
    |||||||  |||||||||||||||||||||||||||||||||       ||||| ||||       ||||||| || ||||||||||||||||| |||||    
T  44906590 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 44906689  T
Q  243 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |       |||||||||||| ||||||||||||| ||||||||||    
T  44906690 cttttttaaaatgacaaagagtcttgattgaataccacaagactt 44906734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 17946487 - 17946273
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||| ||    
T  17946487 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 17946388  T
Q  180 aatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||||       | ||| ||||       ||||||| || ||||||||||||||||| ||||||       ||||||||||||||||||||||    
T  17946387 aatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattg 17946288  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  17946287 aataccacaagactt 17946273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 33807680 - 33807731
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattt 134  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  33807680 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaattt 33807731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 22057900 - 22057746
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||| |||||||||||||||| ||||||||||||||||       |||||||||        ||||||| |||||||||||| ||||    
T  22057900 aaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactagattttttttaagtgatcaagagtcttgatggaat 22057801  T
Q  234 accacaagacnnnnnnn-aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||          |||||||||||||||||||||||||||||||||||||    
T  22057800 accacaagttttttttttaaatgacaaagaatcttgattgaataacacaagactt 22057746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 50762067 - 50762168
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||  |||||| |||||||| ||||||||| |||||    
T  50762067 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttatcaaacaatcattcgaaattagaatg 50762166  T
Q  190 at 191  Q
    ||    
T  50762167 at 50762168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 52618033 - 52618186
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || ||||||||||||||    
T  52618033 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 52618132  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||||| ||||||||||||| |||| |||||    
T  52618133 acctcaagacttttttaaaatgacaaagagtcttgattgaatatcacatgactt 52618186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 10660687 - 10660520
Alignment:
Q  127 taaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaag 219  Q
    |||||||  |||| |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| | ||       || |||| ||     
T  10660687 taaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaatactttttttaaatgatgaaa 10660588  T
Q  220 agtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  10660587 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 10660520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 23535866 - 23535929
Alignment:
Q  128 aaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||| ||||||| |||||||||||||    
T  23535866 aaaatttcactagaaaatcccactaaatctaattaattaaacgatccttctaaatttgaatgat 23535929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 36674137 - 36674351
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  ||||||||||||||||||| |    
T  36674137 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 36674236  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  36674237 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 36674336  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  36674337 aataccacaagactt 36674351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 40897343 - 40897129
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  40897343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 40897244  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||  ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| |||||| ||    
T  40897243 aatttgaatgattttgaataccataagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgaatg 40897144  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  40897143 aataccacaagactt 40897129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 6131317 - 6131392
Alignment:
Q  212 tgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||||||||| ||       ||||||||| || ||||||||||||||||||| ||||    
T  6131317 tgattaagagtcttgattgaataccacaaaactttttttaaatgacaatgagtcttgattgaataacacaaaactt 6131392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 54629043 - 54628977
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||||||||||||||||||  || |||||||  |||| ||||||||||||||||    
T  54629043 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 54628977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 34484098 - 34484251
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| | ||       || |||| || ||||||||||||||    
T  34484098 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaat 34484197  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  34484198 acctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 34484251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 18749811 - 18749700
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  18749811 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 18749712  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  18749711 aatttgaatgat 18749700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 11431725 - 11431511
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||          ||||  |||||||||||||||||||||    
T  11431725 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcga 11431626  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||| ||||       ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||| ||||    
T  11431625 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtctttattg 11431526  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  11431525 aataccacaagactt 11431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 273
Target Start/End: Complemental strand, 26107399 - 26107260
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       || |||| || ||||||||||||||    
T  26107399 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaattgatgaaaagtcttgattgaat 26107300  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattga 273  Q
    ||| ||||||       |||||||||||||||||||||||    
T  26107299 acctcaagacttttttaaaatgacaaagaatcttgattga 26107260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 287
Target Start/End: Complemental strand, 54628904 - 54628828
Alignment:
Q  211 gtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  54628904 gtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 54628828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 32580314 - 32580264
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  32580314 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgat 32580264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 51737794 - 51737844
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  51737794 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgat 51737844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 18749633 - 18749555
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||| ||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  18749633 aagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 18749555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 48379277 - 48379245
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||||||||||||||||||||||||||||    
T  48379277 atttattaaacaatccttcgaaatttgaatgat 48379245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 6131366 - 6131434
Alignment:
Q  219 gagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||||||| ||||| ||       ||||||||| | |||||||||||||||||||||||||    
T  6131366 gagtcttgattgaataacacaaaactttttttaaatgacaatggatcttgattgaataacacaagactt 6131434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 154
Target Start/End: Complemental strand, 55235359 - 55235320
Alignment:
Q  115 acttttttatgctaaaattttactagaaaatcccacaaaa 154  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaa 55235320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 50903397 - 50903464
Alignment:
Q  220 agtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||||||||  |||||       |||||||||||| ||||||||||||| ||||||||||    
T  50903397 agtcttgattgaataccttaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 50903464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 539481 - 539522
Alignment:
Q  150 caaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||||| ||||||||||||||||||||||    
T  539481 caaaatccaatttattaaataatccttcgaaatttgaatgat 539522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 12103692 - 12103614
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || | ||||||||||||||| ||||||       ||||||||||||||||| |||||||| ||| ||||||    
T  12103692 aagtgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagaatcttaattgaataccacgagactt 12103614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 27240428 - 27240464
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  27240428 aaatgacaaagagtcttgattgaataccacaagactt 27240464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 50762235 - 50762271
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  50762235 aaatgacaaagagtcttgattgaataccacaagactt 50762271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 54628964 - 54628932
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||||||||||||| ||||||||||||||    
T  54628964 atttattaaacaatcctttgaaatttgaatgat 54628932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 55235304 - 55235272
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||||||||| |||||||||||||||||    
T  55235304 atttattaaacaatctttcgaaatttgaatgat 55235272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 6197453 - 6197698
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  6197453 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 6197552  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  6197553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 6197652  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  6197653 actttttttaaatgacaaagaatcttgattgaataacacaagactt 6197698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 84 - 287
Target Start/End: Original strand, 2300738 - 2300958
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatc 173  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||          ||||||||||||||||||||||||    
T  2300738 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 2300837  T
Q  174 cttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 266  Q
    ||||||||||||||||       |||||| |||||       ||||||| |||||||||||||||||||||||||||       ||||||||||||||||    
T  2300838 cttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattgaataccacaagactttttttaaatgacaaagaatct 2300937  T
Q  267 tgattgaataacacaagactt 287  Q
    |||||||||||||||||||||    
T  2300938 tgattgaataacacaagactt 2300958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 1391830 - 1391609
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    |||||||||| ||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||||          | ||||||||||||||    
T  1391830 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1391731  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    ||||| |||||||||||||       ||||||||||       |||||||||||||||||||||||||||||||||||       ||||||||| |||||    
T  1391730 ccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttatttaaatgacaatgaatc 1391631  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  1391630 ttgattgaataacacaagactt 1391609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 29076805 - 29076583
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||| |          |||||||| ||||||||||||||    
T  29076805 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29076706  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnn-aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 264  Q
    |||||||||||||||||||       || |||||||        |||||||||||| ||| ||||||||||||||||||       ||||||||||||||    
T  29076705 ccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaat 29076606  T
Q  265 cttgattgaataacacaagactt 287  Q
    |||||||||||||||||||||||    
T  29076605 cttgattgaataacacaagactt 29076583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 29111779 - 29111556
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||| |          |||||||| ||||||||||||||    
T  29111779 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29111680  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnn--aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaa 263  Q
    |||||||||||||||||||       || |||||||         |||||||||||| ||| ||||||||||||||||||       |||||||||||||    
T  29111679 ccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaa 29111580  T
Q  264 tcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||||    
T  29111579 tcttgattgaataacacaagactt 29111556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 28002895 - 28002650
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc-- 156  Q
    |||||||||||||||||       ||||||||||||   ||||||||| |||||||||||||| |||||||||||| ||||||||||  |||||||||      
T  28002895 tagtaaaatcttaaaagaaaaaaacaatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatcca 28002796  T
Q  157 --------ttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
            | ||||||||||||||||||| |||||||||||||       | ||||||||       ||||||||||||||||||||||||||||| |||    
T  28002795 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccagaag 28002696  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||| |||||||||||||||| |||||||||    
T  28002695 actttttttaaatgacaaaaaatcttgattgaataagacaagactt 28002650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 31067682 - 31067581
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||||||||||||||||||  || |||||||  |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31067682 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 31067583  T
Q  190 at 191  Q
    ||    
T  31067582 at 31067581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 7052051 - 7051830
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||| ||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| |          |||||||  ||||||||||||||    
T  7052051 caattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaat 7051952  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||| |||  |||       ||||||| |||||||||||||| ||||||||||||       |||||||||||||||    
T  7051951 ccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgattgtataccacaagactttttttaaatgacaaagaatc 7051852  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||| | ||| ||||||||||    
T  7051851 ttgatcgtataccacaagactt 7051830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 30385075 - 30385174
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| |||||||||||| || |  |||||||  |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  30385075 aagaaatctcatcttttcatgaaagactttgttgt--taaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcgaaatttgaatg 30385172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 4200443 - 4200541
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaat 188  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||  ||||||||||||||||||||||||||||||    
T  4200443 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaat 4200541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 657028 - 656957
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacaca 281  Q
    |||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||    
T  657028 aagtgattaagagtcttgattgaataccacaagactttttttaaatg-caaagaatcttgattgaataacaca 656957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 31895895 - 31895681
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||||||||||||||||          ||||  |||||||||||||||||||||    
T  31895895 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 31895796  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || ||||||||||||||||  ||||||       |||||||||||| |||||||||    
T  31895795 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacttcaagacttttttaaaatgacaaagagtcttgattg 31895696  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  31895695 aataccacaagactt 31895681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 34773547 - 34773394
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||       ||||| |||        || |||| || ||||||||||||||    
T  34773547 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagattttttttaaatgatgaaaagtcttgattgaat 34773448  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  34773447 acctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 34773394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 14262500 - 14262653
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||| ||||||       ||||| ||||       || |||| || | ||||||||||||    
T  14262500 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttaaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaat 14262599  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  14262600 acctcaagactttttaaaaatgacaaagagtcttgattgaataccacaagactt 14262653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 7497214 - 7497164
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||| ||||||||||||||||||||    
T  7497214 aaaatccatcaaaatccaatttattaaacactccttcgaaatttgaatgat 7497164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 34759056 - 34759122
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| |||||||| |||||  || |||||||  |||| ||||||||||||||||    
T  34759056 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatc 34759122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 34759117 - 34759271
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||| ||||||||||||||       ||||| ||||       ||||||| || ||||||||||||||    
T  34759117 aaaatccatcaaaatccaatttattaaacaatccttggaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 34759216  T
Q  234 accacaagacnnnnnnnaaa-tgacaaagaatcttgattgaataacacaagactt 287  Q
    ||  ||||||       ||| ||||||||| ||||||||||||| ||||||||||    
T  34759217 acttcaagactttttttaaaatgacaaagagtcttgattgaataccacaagactt 34759271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 2238717 - 2238668
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaat 132  Q
    ||||| |||||||||||||||||| |||||||| ||||| || |||||||    
T  2238717 caatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 11113733 - 11113770
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttt 121  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgtttt 11113770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 30385241 - 30385277
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  30385241 aaatgacaaagagtcttgattgaataccacaagactt 30385277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 21147274 - 21147053
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          ||||| ||||||||||||||    
T  21147274 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 21147175  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  21147174 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 21147075  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  21147074 ttgattgaataacacaagactt 21147053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 89 - 287
Target Start/End: Original strand, 5272924 - 5273139
Alignment:
Q  89 taagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcg 178  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||| ||||    
T  5272924 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcg 5273023  T
Q  179 aaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgatt 271  Q
    |||||||||||       ||||||||||||       || |||||||||||||||||||||||||| |||||       |||||||||||||||||||||    
T  5273024 aaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccataagactttttttaaatgacaaagaatcttgatt 5273123  T
Q  272 gaataacacaagactt 287  Q
    ||||| ||||||||||    
T  5273124 gaatagcacaagactt 5273139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 7016714 - 7016959
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||             
T  7016714 tagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7016813  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||| |||||    
T  7016814 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 7016913  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       ||||   ||||| ||||||||||||| ||||||||||    
T  7016914 actttttttaaattgaaaagagtcttgattgaataccacaagactt 7016959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 33656040 - 33656263
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  33656040 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33656139  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgac--aaagaa 263  Q
    |||||||||||||||||       |||||| ||||        |||||||||||||||||||||||||||||||||||       |||||||  ||||||    
T  33656140 ccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaaaagaa 33656239  T
Q  264 tcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||||    
T  33656240 tcttgattgaataacacaagactt 33656263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 27458925 - 27459169
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||| ||||||||| ||||| || ||||| |||||||||||| ||||||||||||||             
T  27458925 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatcca 27459024  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| ||||||||||||||||||| |||| ||||||       ||||||||||||       ||||||||||||||||||||||||||| |||||    
T  27459025 tcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattgaatactacaag 27459123  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       ||||||||||||||||| |||||||||||||||||||    
T  27459124 actttttttaaatgacaaagaatcttaattgaataacacaagactt 27459169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 32157869 - 32158118
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttat---gctaaaattttactagaaaatcccacaaaat 155  Q
    |||||||||||||||||       ||||  |||||||||||||||||| |||||||||| |||| |   |||||||||||||||||||||||||||||||    
T  32157869 tagtaaaatcttaaaagaaaagaacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaat 32157968  T
Q  156 c----------ttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnn-aagtgattaagagtcttgattgaatacca 237  Q
    |          | |||||||||||||||||||||||||||||||||       ||||||||||        ||||||||| | |||||||||||||||||    
T  32157969 ccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattgaatacca 32158068  T
Q  238 caagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||       |||||||||||||||||||||||||||||||||||||    
T  32158069 caagactttttttaaatgacaaagaatcttgattgaataacacaagactt 32158118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 287
Target Start/End: Complemental strand, 139474 - 139259
Alignment:
Q  89 taagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaatccttcg 178  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||| ||| |||||||| ||||||||          |  |||||||||||||||||||    
T  139474 taagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcg 139375  T
Q  179 aaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgatt 271  Q
    |||||||||||||       ||||||||||       |||||||||| |||||||||||||||||||| |||       |||||||||||||||||||||    
T  139374 aaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacatgactttttttaaatgacaaagaatcttgatt 139275  T
Q  272 gaataacacaagactt 287  Q
    ||||||||||| ||||    
T  139274 gaataacacaaaactt 139259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 9220716 - 9220824
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    |||||||||||||| ||||||||| | ||||||||||||  || ||||||||||||| ||||||| ||||| ||| ||| |||||||||||||| |||||    
T  9220716 caatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatcctacaaattctaattcattaaacaatccttagaaat 9220815  T
Q  183 ttgaatgat 191  Q
    |||||||||    
T  9220816 ttgaatgat 9220824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 97 - 243
Target Start/End: Complemental strand, 849341 - 849177
Alignment:
Q  97 ctcatgttttt-atgaaagacttttttatgctaaaattttactagaaaatcccacaaa----------atcttatttattaaacaatccttcgaaatttg 185  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||          |||| |||||||||||||||||||||||||||    
T  849341 ctcatgtttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttg 849242  T
Q  186 aatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 243  Q
    ||||       |||||| |||||       |||||||||||||||||||||||||||||||||||    
T  849241 aatgattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagac 849177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 284
Target Start/End: Original strand, 4240468 - 4240669
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| | || ||||||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||||||||||||||||    
T  4240468 aagaaatctcatctattcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 4240567  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  4240568 attttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 4240667  T
Q  283 ga 284  Q
    ||    
T  4240668 ga 4240669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 5949298 - 5949197
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||||||||||||||||    
T  5949298 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 5949199  T
Q  190 at 191  Q
    ||    
T  5949198 at 5949197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 6460931 - 6460778
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||| ||||||||||||| |||||||||||||||||||       |||||||||        || ||||||||||||||||||||||    
T  6460931 aaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactagattttttttaaatgattaagagtcttgattgaat 6460832  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    || ||| |||       ||||||||||||||||||||||||||||| |||||||    
T  6460831 acgacatgactttttttaaatgacaaagaatcttgattgaataacataagactt 6460778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 1461154 - 1461255
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| |||||||| |||||  || |||||||  | || |||||||  |||||||  |||||||||||||||||||||||||||||||    
T  1461154 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacagtacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 1461253  T
Q  190 at 191  Q
    ||    
T  1461254 at 1461255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 40013718 - 40013819
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||   ||||||  ||| |||||||||||||||||||||||||||    
T  40013718 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaatg 40013817  T
Q  190 at 191  Q
    ||    
T  40013818 at 40013819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 1152102 - 1152323
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaat 172  Q
    ||||| ||||||||||||| |||| || |||||||||||  || |||||||  |||| ||||||||||||||||            ||||||||||||||    
T  1152102 caatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 1152201  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    || ||||||||||||||||       ||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||    
T  1152202 ccctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtc 1152301  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||| ||||||||||    
T  1152302 ttgattgaataccacaagactt 1152323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 4550324 - 4550477
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || ||||||||||||||    
T  4550324 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 4550423  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| |||| |       |||||||||||| ||||||||||||| ||||||||||    
T  4550424 acctcaagcctttgttaaaatgacaaagagtcttgattgaataccacaagactt 4550477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 9689864 - 9689791
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||| |||||||||| |||||||||||||||||||||| ||  ||||||||||| |||||||| |||| ||||    
T  9689864 caatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatc 9689791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 37014094 - 37013900
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||||||||||||||||||  || ||||||| ||||| ||||||| |          |||||||||||| |||||||||||||||||    
T  37014094 aagaaatctcatctttttatgaaagactttttcttgttaaaattatactacaaaatccaa----------tttattaaacaacccttcgaaatttgaatg 37014005  T
Q  190 at-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
    ||       ||| | ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  37014004 attttgaataccgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaataccacaa 37013905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 5273111 - 5273181
Alignment:
Q  217 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||| ||||||||||||| ||||||||       |||||||||| ||||||||||||||||||||||||||    
T  5273111 aagaatcttgattgaatagcacaagactttttttaaatgacaaaaaatcttgattgaataacacaagactt 5273181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 284
Target Start/End: Original strand, 14000111 - 14000322
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  ||||||||||||||||||| |    
T  14000111 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14000210  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  14000211 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagactttttaaaaatgacaaagagtcttgattg 14000310  T
Q  273 aataacacaaga 284  Q
    |||| |||||||    
T  14000311 aataccacaaga 14000322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 7947640 - 7947690
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  7947640 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgat 7947690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 13926070 - 13926020
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  13926070 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgat 13926020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 16894044 - 16894078
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagac 243  Q
    |||||||||||||||||||||||||||||||||||    
T  16894044 aagtgattaagagtcttgattgaataccacaagac 16894078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 40013847 - 40013922
Alignment:
Q  212 tgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  40013847 tgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 40013922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 1461280 - 1461357
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagact 286  Q
    ||||||| || ||||||||||||||||| ||||||       |||| ||||||| ||||||||||||| |||||||||    
T  1461280 aagtgatgaaaagtcttgattgaatacctcaagacttttttaaaattacaaagagtcttgattgaataccacaagact 1461357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 39852545 - 39852434
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  ||||| |||||||||||||||    
T  39852545 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatccttcga 39852446  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  39852445 aatttgaatgat 39852434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 287
Target Start/End: Complemental strand, 5949158 - 5949095
Alignment:
Q  224 ttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  5949158 ttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 5949095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 9220849 - 9220916
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaata 276  Q
    ||||||| |||||||||||||||||| ||||||||       |||||||||||| | |||||||||||    
T  9220849 aagtgataaagagtcttgattgaatatcacaagactttttctaaatgacaaagagttttgattgaata 9220916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 14465303 - 14465344
Alignment:
Q  150 caaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  14465303 caaaatccgatttattaaacaatctttcgaaatttgaatgat 14465344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 22746361 - 22746283
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||| ||||||||||||| ||||||       |||||||||||| | ||||||||||| ||||||||||    
T  22746361 aagtgatgaaaagttttgattgaatacctcaagacttttttaaaatgacaaagagttttgattgaataccacaagactt 22746283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 13925982 - 13925917
Alignment:
Q  222 tcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||| ||||    
T  13925982 tcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactt 13925917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 22746418 - 22746386
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||||||||| |||||||||||||||||    
T  22746418 atttattaaacaatcattcgaaatttgaatgat 22746386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 24776563 - 24776342
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          ||||| ||||||||||||||    
T  24776563 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24776464  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  24776463 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 24776364  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  24776363 ttgattgaataacacaagactt 24776342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 16269923 - 16269678
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||          
T  16269923 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatcca 16269824  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  16269823 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 16269724  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  16269723 actttttttaaatgacaaagaatcttgattgaataacacaagactt 16269678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 20605468 - 20605223
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          
T  20605468 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20605369  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||||||||||| ||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  20605368 tcaaaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20605269  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  20605268 actttttttaaatgacaaagaatcttgattgaataacacaagactt 20605223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 31170602 - 31170847
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  31170602 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 31170701  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||| ||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  31170702 tcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 31170801  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  31170802 actttttttaaatgacaaagaatcttgattgaataacacaagactt 31170847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 14198555 - 14198800
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||             
T  14198555 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatcca 14198654  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       |||||||| |||       |||||||||||||||||||||||||||||||||    
T  14198655 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaag 14198754  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||| ||||||||||||||||||||||    
T  14198755 actttttttaaatgacaaagaattttgattgaataacacaagactt 14198800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 43847878 - 43847633
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc-- 156  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||| ||||||||| |||||||||||| |||||||||| ||||||||||      
T  43847878 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatcca 43847779  T
Q  157 --------ttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
            | |||||||||||||||||||||||||||||||||       || |||||||       |||||||||||||||||||||||||||||||||    
T  43847778 tcaaattctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaataccacaag 43847679  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  43847678 actttttttaaatgacaaagaatcttgattgaataacacaagactt 43847633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 5093049 - 5093270
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||          |||||||| ||||||||||||||    
T  5093049 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 5093148  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    ||||| |||||||||||       |||| |||||||       ||||||||||| |||||||||||||||||||||||       |||||||||||||||    
T  5093149 ccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaataccacaagactttttttaaatgacaaagaatc 5093248  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  5093249 ttgattgaataacacaagactt 5093270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 12407612 - 12407367
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||          
T  12407612 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatcca 12407513  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| ||||||||||||||||||| |||||||||||       ||||||||||||       |||||||||||||||| ||||||||||||||||    
T  12407512 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaag 12407413  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  12407412 actttttttaaatgacaaagaatcttgattgaataacacaagactt 12407367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 305443 - 305688
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccaca------- 151  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||||| ||||           
T  305443 tagtaaaatcttaaaagaaataaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatcca 305542  T
Q  152 ---aaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
       |||||| ||||||||||||||| ||| |||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  305543 tcgaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 305642  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||| ||||||||||||||||||||||||||    
T  305643 acttttttcaaatgacaaataatcttgattgaataacacaagactt 305688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 22551741 - 22551986
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc-- 156  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||| ||||||| |||||||||||| |||||||||||||||||||||      
T  22551741 tagtaaaatcttaaaaggaaaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 22551840  T
Q  157 --------ttatttattaaacaatccttcgaaatttgaat-------gataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
            | ||||| ||||||||| ||||||||||||||        ||||||||||||       |||||||||| ||||||||||||||||||||||    
T  22551841 tcaaaatttaatttaataaacaatcattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacaag 22551940  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  22551941 actttttttaaatgacaaagaatcttgattgaataacacaagactt 22551986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 35317294 - 35317049
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||  |||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||| |||             
T  35317294 tagtaaaatcttaaaagaaaaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 35317195  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||  |||||    
T  35317194 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatattacaag 35317095  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||| ||||    
T  35317094 actttttttaaatgacaaagaatcttgattgaataacacaaaactt 35317049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 44765974 - 44765762
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    |||||||||||||||||||||||| ||||||         |||||||||||| |||||||||||||||||||||          ||||||||||||||||    
T  44765974 caatcctaagaaatctcatgttttcatgaaa---------atgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 44765884  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    | |||||||||||||||||       ||||||||||       |||||||||||||||| ||||||||||||||||||       |||||||||||||||    
T  44765883 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaagactttttttaaatgacaaagaatc 44765784  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  44765783 ttgattgaataacacaagactt 44765762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 287
Target Start/End: Complemental strand, 32125455 - 32125237
Alignment:
Q  89 taagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaatccttcg 178  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||    
T  32125455 taagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 32125356  T
Q  179 aaatttgaatg-------ataccactagacnnnnnnnaagtg---attaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttg 268  Q
    |||||||||||       |||||||| |||       || ||   |||||||||||||||||||||||||| |||       |||||||||||||| |||    
T  32125355 aaatttgaatgattttgaataccacttgactttttttaaatgatcattaagagtcttgattgaataccacatgactttttttaaatgacaaagaattttg 32125256  T
Q  269 attgaataacacaagactt 287  Q
    |||||||||||||||||||    
T  32125255 attgaataacacaagactt 32125237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 103 - 287
Target Start/End: Complemental strand, 1789630 - 1789429
Alignment:
Q  103 tttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaatccttcgaaatttgaatgat- 191  Q
    |||| |||||||||||||| |||||||||||| | |||||||||||||||||||          | |||||||||||||||||||||||||||||||||     
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  192 ------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 285  Q
          ||||||||||       |||||||||||||| ||||||||||| || |||||       |||||||||||||||||||||||||||||||||||    
T  1789530 ttgaataccactagactttttttaagtgattaagagttttgattgaatatcataagactttttttaaatgacaaagaatcttgattgaataacacaagac 1789431  T
Q  286 tt 287  Q
    ||    
T  1789430 tt 1789429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 10125302 - 10125410
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    ||||| ||||||||||| |||||||||||||||||||||  || |||||||| |||| |||||||||||||||   |||||||||||||||||| |||||    
T  10125302 caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattcaatttattaaacaatcctttgaaat 10125401  T
Q  183 ttgaatgat 191  Q
    |||||||||    
T  10125402 ttgaatgat 10125410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 28740302 - 28740506
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||||||||||||||||||  || |||||||  || | |||||||  |||||||  |||||||||||||||||||||||||||||||    
T  28740302 aagaaatctcatctttttatgaaagactttttcttgttaaaattacaccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatg 28740401  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  28740402 attttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 28740501  T
Q  283 gactt 287  Q
    |||||    
T  28740502 gactt 28740506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 26601214 - 26601423
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    ||||||||| |||||| ||||||| || ||| ||||||  ||| |||| ||| |||||||||||||||||||||| ||||||||||||| | ||||||||    
T  26601214 caatcctaaaaaatct-atgttttcatcaaaaactttta-atgttaaagtttcactagaaaatcccacaaaatctgatttattaaacaaacattcgaaat 26601311  T
Q  183 ttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 275  Q
    |||||||       |||||||  |||       ||||||||||||||||||||||||||| |||||||        ||||||||||| |||||||| |||    
T  26601312 ttgaatgattttgaataccacgtgactttttttaagtgattaagagtcttgattgaatactacaagacttttttttaatgacaaagagtcttgattaaat 26601411  T
Q  276 aacacaagactt 287  Q
    ||||||| ||||    
T  26601412 aacacaaaactt 26601423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 13833441 - 13833542
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| || | ||||||||||||||  || |||||||  |||| ||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  13833441 aagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaatccttcaaaatttgaatg 13833540  T
Q  190 at 191  Q
    ||    
T  13833541 at 13833542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 9120358 - 9120261
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||| ||||  || ||||||||| |||||||||||||||||||||    
T  9120358 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatc 9120261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 20605209 - 20605139
Alignment:
Q  217 aagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  20605209 aagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactt 20605139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 28844695 - 28844542
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || ||||||||||||||    
T  28844695 aaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 28844596  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  28844595 acctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 28844542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 287
Target Start/End: Complemental strand, 7026775 - 7026591
Alignment:
Q  110 gaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacn 202  Q
    ||||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||     
T  7026775 gaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagact 7026676  T
Q  203 nnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
          || |||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  7026675 ttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 7026591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 3463863 - 3463762
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||| |||| |||||||    
T  3463863 aagaaatctcatattttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaaattgaatg 3463764  T
Q  190 at 191  Q
    ||    
T  3463763 at 3463762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 33135823 - 33135610
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||||||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  33135823 aagaaatctcat-tttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 33135725  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  33135724 aatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 33135625  T
Q  273 aataacacaagactt 287  Q
    |||| ||||| ||||    
T  33135624 aataccacaatactt 33135610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 43078764 - 43078698
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||| || ||||||||||||||||||| ||| |||||||  |||| ||||||||||||||||    
T  43078764 aagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatc 43078698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 10657546 - 10657393
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  ||||||||||||||| |||||||||||||||||       ||||| ||||       ||||||| || ||||||||||||||    
T  10657546 aaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 10657447  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||| ||       ||||||||||| |||||||||||||| ||||||||||    
T  10657446 acctcaaaacttttttaaaatgacaaaggatcttgattgaataccacaagactt 10657393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 379125 - 379027
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||| |||| ||||| || |||||  || |||||||  |||| ||||||   |||||||  ||||||||||||||||||| |||||||||||||    
T  379125 aaatctcatcttttcatgaacgattttttcttgttaaaattacactacaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgat 379027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 3574979 - 3574937
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  3574979 acaaaatccaatttattaaacaatccttcgaaatttgaatgat 3574937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 18177468 - 18177402
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| ||||||| |||||||||||  || |||||||  |||| ||||||||||||||||    
T  18177468 aagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 18177402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 26788838 - 26788771
Alignment:
Q  220 agtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  26788838 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 26788771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 215370 - 215448
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||||||||||||||||| ||||||       || ||||||||| ||||||||||||| ||||||||||    
T  215370 aagtgatgaaaagtcttgattgaatacctcaagactttttaaaattgacaaagagtcttgattgaataccacaagactt 215448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 25288290 - 25288249
Alignment:
Q  150 caaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  25288290 caaaatccaatttattaaacaatccttcgaaatttgaatgat 25288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 26788926 - 26788876
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  ||||||||||||||||||| |||||||||||||    
T  26788926 aaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgat 26788876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 287
Target Start/End: Complemental strand, 9120183 - 9120155
Alignment:
Q  259 aagaatcttgattgaataacacaagactt 287  Q
    |||||||||||||||||||||||||||||    
T  9120183 aagaatcttgattgaataacacaagactt 9120155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 18177385 - 18177357
Alignment:
Q  163 attaaacaatccttcgaaatttgaatgat 191  Q
    |||||||||||||||||||||||||||||    
T  18177385 attaaacaatccttcgaaatttgaatgat 18177357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 43078685 - 43078653
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||||||||| |||||||||||||||||    
T  43078685 atttattaaacaatcattcgaaatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 15009 - 15254
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  15009 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15108  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||| |||||    
T  15109 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15208  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  15209 actttttttaaatgacaaagaatcttgattgaataacacaagactt 15254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 15652 - 15897
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  15652 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15751  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||| |||||    
T  15752 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15851  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  15852 actttttttaaatgacaaagaatcttgattgaataacacaagactt 15897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 3e-48; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 84 - 287
Target Start/End: Original strand, 43581090 - 43581310
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatc 173  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||| |||||||||||||||    
T  43581090 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 43581189  T
Q  174 cttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 266  Q
    ||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||| |||||||       ||||||||||||||||    
T  43581190 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagactttttttaaatgacaaagaatct 43581289  T
Q  267 tgattgaataacacaagactt 287  Q
    |||||||||||||||||||||    
T  43581290 tgattgaataacacaagactt 43581310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 47914498 - 47914253
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          
T  47914498 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 47914399  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        |||||||||||||||||||||||||||||||||||||       ||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47914398 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47914299  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  47914298 actttttttaaatgacaaagaatcttgattgaataacacaagactt 47914253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 30441028 - 30440783
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| | |||||||||||| || ||||||||| |||||||||||||||||          
T  30441028 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatcca 30440929  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  30440928 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 30440829  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |        |||||||||||||||||||||||||||||||||||||    
T  30440828 attttttttaaatgacaaagaatcttgattgaataacacaagactt 30440783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 34695505 - 34695260
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||          
T  34695505 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 34695406  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||||||||||||||||       |||||||| |||       ||||||||||||||||||||||||||||||||     
T  34695405 tcaaaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaaa 34695306  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       ||||||||| |||||||||||||||||||||||||||    
T  34695305 actttttttaaatgacaaggaatcttgattgaataacacaagactt 34695260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 40996624 - 40996869
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |             
T  40996624 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 40996723  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       ||| |||||||||||||||||||||||||||||    
T  40996724 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaag 40996823  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||| ||||||    
T  40996824 actttttttaaatgacaaagaatcttgattgaataacacgagactt 40996869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 44343395 - 44343616
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  44343395 caatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44343494  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       ||||||||| ||       |||||||||||||||||||||||||| ||||||||       |||||||||||||||    
T  44343495 ccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaatatcacaagactttttttaaatgacaaagaatc 44343594  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  44343595 ttgattgaataacacaagactt 44343616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 973416 - 973171
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||          
T  973416 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 973317  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| |||||||||||||||||||||||||||||||       ||||||||| |        |||||||||||||||||||||||||||||||||    
T  973316 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaataccacaag 973217  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||| ||||    
T  973216 actttttttaaatgacaaagaatcttgattgaataacacaaaactt 973171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 18914710 - 18914955
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  18914710 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 18914809  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| ||||||||||||| |||| ||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||    
T  18914810 tcaaaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 18914909  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       ||| |||||||||| ||||||||||||||||||||||    
T  18914910 actttttttaaaggacaaagaattttgattgaataacacaagactt 18914955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 7719259 - 7719480
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  7719259 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7719358  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    | |||||||||||||||       |||||||||||        |||||||||||||||||||||||||||||||||||       |||||||||| |||     
T  7719359 cattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataata 7719458  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  7719459 ttgattgaataacacaagactt 7719480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 12893616 - 12893395
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||| ||          |||||||| ||||||||||||||    
T  12893616 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
     ||||||||||||||||       |||||| |||||       ||||||||||||||||||||| |||||||||||||       |||||||||||||||    
T  12893516 tcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaataccacaagactttttttaaatgacaaagaatc 12893417  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||||    
T  12893416 ttgattgaataacacaagactt 12893395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 34009245 - 34008999
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |||             
T  34009245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatcca 34009146  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccacta-gacnnnnnnnaagtgattaagagtcttgattgaataccacaa 240  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||| |||       |||||||||||||| |||||||||||||||||    
T  34009145 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggactttttttaagtgattaagagtgttgattgaataccacaa 34009046  T
Q  241 gacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||       |||||||||| ||||||||||||||||||||||||||    
T  34009045 gactttttttaaatgacaaataatcttgattgaataacacaagactt 34008999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 276
Target Start/End: Complemental strand, 9180071 - 9179871
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||  |||||||||||||||||||| |||    
T  9180071 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatccaatttattaaacaatccttcggaat 9179972  T
Q  183 ttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 275  Q
    || | ||       ||||||| ||||       ||||||| ||||||||||||||||||| |||| ||       |||||||||||||||||||||||||    
T  9179971 ttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaaagaatcttgattgaat 9179872  T
Q  276 a 276  Q
    |    
T  9179871 a 9179871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 47879400 - 47879155
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||             
T  47879400 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 47879301  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| ||||||||||||||||||  |||||||||||       ||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47879300 tcaaaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47879201  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  47879200 actttttttaaatgacaaagaatcttgattgaataacacaagactt 47879155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 7718361 - 7718538
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  7718361 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7718460  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagac 243  Q
    |||||||||||||||||       ||||||||||||       |||||||||||||||||||||||||||||||||||    
T  7718461 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 7718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 287
Target Start/End: Complemental strand, 727692 - 727499
Alignment:
Q  102 gtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------atacc 194  Q
    ||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||       ||||     
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatact 727593  T
Q  195 actaga-cnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||         ||||||| |||||| ||||||||||| ||||||||       |||||||||||||| ||||||||||||||||||||||    
T  727592 actagatttttttttaagtgataaagagttttgattgaatatcacaagactttttttaaatgacaaagaattttgattgaataacacaagactt 727499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 19810983 - 19810882
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||| || ||||||||||||    
T  19810983 aagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatccaatttattaaacaatcatttgaaatttgaatg 19810884  T
Q  190 at 191  Q
    ||    
T  19810883 at 19810882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 20275238 - 20275483
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||| ||||||||||||||| ||| |||| ||||||||| |||||||||||| |||| |||||||||             
T  20275238 tagtaaaatcttaaaagaaaaaaacaatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 20275337  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||  ||||       ||||||||||||||||||||||||||||| |||    
T  20275338 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattgaataccataag 20275437  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       ||||||||| |||||||||||||||||| ||||||||    
T  20275438 actttttttaaatgacaaggaatcttgattgaataacccaagactt 20275483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 39219352 - 39219449
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  39219352 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatc 39219449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 276
Target Start/End: Original strand, 3797066 - 3797266
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca-caaaatcttatttattaaacaatccttcgaaa 181  Q
    |||||||||||||||| |||||||  | ||||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| |||    
T  3797066 caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatcccatcaaaatctaatttattaaacaatccttcaaaa 3797164  T
Q  182 tttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaa 274  Q
    ||| ||||       ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||||    
T  3797165 ttttaatgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaa 3797264  T
Q  275 ta 276  Q
    ||    
T  3797265 ta 3797266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 287
Target Start/End: Complemental strand, 31639038 - 31638862
Alignment:
Q  118 tttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaa 210  Q
    |||| |||| ||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||       ||||||||||||       ||    
T  31639038 ttttcatgccaaaatttaactagaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaa 31638939  T
Q  211 gtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||||||||| ||||||||||  |        |||||||||||||| ||||||||||||||||||||||    
T  31638938 gtgattaagagtcttgatagaataccacacaagtttttttaaatgacaaagaattttgattgaataacacaagactt 31638862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 287
Target Start/End: Complemental strand, 19251729 - 19251519
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatt 183  Q
    ||||| ||||||| ||| ||||| ||||||||||||||  ||||||||||| || |||||||||  |||||||  |||||||||||||||||||||||||    
T  19251729 aatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 19251630  T
Q  184 tgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaata 276  Q
    ||||||       ||||||| ||||       ||||||| || | | ||||||||||||| ||||||       |||||||||||| |||||||||||||    
T  19251629 tgaatgattttgaataccacgagactttttttaagtgatgaaaaattttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaata 19251530  T
Q  277 acacaagactt 287  Q
     ||||||||||    
T  19251529 ccacaagactt 19251519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 10068668 - 10068550
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||          | ||||||||||||||    
T  10068668 caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaat 10068569  T
Q  173 ccttcgaaatttgaatgat 191  Q
    ||||| |||||||||||||    
T  10068568 ccttcaaaatttgaatgat 10068550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 32142916 - 32143034
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  32142916 caatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 32143015  T
Q  173 ccttcgaaatttgaatgat 191  Q
    ||||| |||||||||||||    
T  32143016 ccttcaaaatttgaatgat 32143034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 7113660 - 7113586
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatct 157  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  7113660 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatct 7113586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 93 - 287
Target Start/End: Complemental strand, 37328108 - 37327907
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg--- 189  Q
    |||||| || |||| ||||||||||||||| || ||||||| ||||| |||||||  ||||||   |||||||||||||||||| ||||||||||||       
T  37328108 aaatcttatcttttcatgaaagacttttttttgttaaaattatactacaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgatt 37328009  T
Q  190 ----ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagac 285  Q
        ||||||| ||||       |||| || || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||    
T  37328008 ttgaataccacaagactttttttaagtaatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagac 37327909  T
Q  286 tt 287  Q
    ||    
T  37327908 tt 37327907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 509840 - 509636
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  || ||||||   |||| |||||||  |||||||  ||||||||||||||| |||||||||||||||    
T  509840 aagaaatctcatcttttcatgaaagactttttcttgttaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcgttcgaaatttgaatg 509741  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||| | ||||||||||||| |||||    
T  509740 attttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaatagtcttgattgaataccacaa 509641  T
Q  283 gactt 287  Q
    |||||    
T  509640 gactt 509636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 44121919 - 44122115
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg--- 189  Q
    ||||||||| |||| || |||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||||||||||||||||       
T  44121919 aaatctcatcttttcattaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 44122018  T
Q  190 ----ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
        ||||||| |||        ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| |||||    
T  44122019 ttgaataccacaagattttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaa 44122115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 44623295 - 44623491
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg--- 189  Q
    |||| |||| ||||||||| ||||||||| || ||||||||| |||||||||| |||||||||   |||||||||||| || || ||||| ||||||       
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattcaatttattaaacagtctttagaaatatgaatgatt 44623394  T
Q  190 ----ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
        ||| ||| ||||       ||||||| ||||||||||||| |||||||||||||       |||||||||||| ||||||||||||| |||||    
T  44623395 ttgaatatcacgagacctttttaaagtgatgaagagtcttgattaaataccacaagactttttttaaatgacaaagagtcttgattgaatatcacaa 44623491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 90 - 285
Target Start/End: Original strand, 40460723 - 40460925
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| |||||||| |||||  || |||||||  |||| |||||||  |||||||  ||||||||||||||| |||||||||||||||    
T  40460723 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatg 40460822  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||||||||||||||| | ||||||       |||||||||||| |||| |||||||| |||||    
T  40460823 attttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagagtcttaattgaatatcacaa 40460922  T
Q  283 gac 285  Q
    |||    
T  40460923 gac 40460925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 29585698 - 29585597
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    ||||||| |||| |||||||||||||||||||  || |||||||  |||| |||||||  |||||||  | ||||||||||||||||| |||||||||||    
T  29585698 aagaaatttcatctttttatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaaattattaaacaatccttcaaaatttgaatg 29585599  T
Q  190 at 191  Q
    ||    
T  29585598 at 29585597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 12740573 - 12740353
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatct---------tatttattaaacaatc 173  Q
    ||||| ||||||||||||| ||||||||||||||||| |  || |||||||  |||| |||||||||||||||||          |||||||||||||||    
T  12740573 caatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatccatttattaaacaatc 12740474  T
Q  174 cttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 266  Q
    ||| ||||||||||||       ||||||| ||||       || |||| || | |||||||| |||||| ||||||       ||||||||||||||||    
T  12740473 ctttgaaatttgaatgattttgaataccacgagactttttttaaatgatgaaaaatcttgattaaatacctcaagactttttaaaaatgacaaagaatct 12740374  T
Q  267 tgattgaataacacaagactt 287  Q
    |||||||||| ||||||||||    
T  12740373 tgattgaataccacaagactt 12740353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 23101492 - 23101278
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  23101492 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 23101393  T
Q  180 aatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  23101392 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 23101293  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  23101292 aataccacaagactt 23101278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 43679592 - 43679504
Alignment:
Q  113 agacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||| |||||||||||| |||||||||||||||||||||          | |||||||||||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgat 43679504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 28342541 - 28342327
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  28342541 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28342442  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || ||||| ||||||||||| ||||||       |||||||||||| |||||||||    
T  28342441 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtctcgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 28342342  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  28342341 aataccacaagactt 28342327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 29614770 - 29614984
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  |||||||||||||||||||||    
T  29614770 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29614869  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||| ||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  29614870 aatttgaatgattttgaatatcacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 29614969  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  29614970 aataccacaagactt 29614984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 39784293 - 39784079
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  39784293 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 39784194  T
Q  180 aatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||| ||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||||       |||||||||||| |||||||||    
T  39784193 aatttaaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 39784094  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  39784093 aataccacaagactt 39784079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 12963834 - 12963784
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  12963834 aaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgat 12963784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 28034811 - 28034877
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| ||||||||||||||| || |||||||  |||| ||||||||||||||||    
T  28034811 aagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatc 28034877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 3023059 - 3022906
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       ||||||| || | ||||||||||||    
T  3023059 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaat 3022960  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||| | ||||||||||||| ||||||||||    
T  3022959 acctcaagacttttttaaaatgacaaaaagtcttgattgaataccacaagactt 3022906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Complemental strand, 8078457 - 8078387
Alignment:
Q  213 gattaagagtcttgattgaataccacaagacnnnnnnn-aaatgacaaagaatcttgattgaataacacaa 282  Q
    ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  8078457 gattaagagtcttgattgaataccacaagattcttttttaaatgacaaagaatcttgattgaataacacaa 8078387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 9882303 - 9882456
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  ||||||||||||||| |||||||||||||||||       ||||| ||||       ||||||| || ||||||||||||||    
T  9882303 aaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaat 9882402  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||| ||||||       |||||||||||| ||||||||||||| ||||| ||||    
T  9882403 acctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactt 9882456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 46405447 - 46405548
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| ||||||| ||| |||||||  || |||||||  || | |||||||  |||||||  ||||||||||||||| || ||||||||||||    
T  46405447 aagaaatctcatctttttattaaatactttttcttgttaaaattacaccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatg 46405546  T
Q  190 at 191  Q
    ||    
T  46405547 at 46405548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 43187356 - 43187428
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaat 155  Q
    |||||| || ||||||||||| || ||||||||||||||  || |||||||| |||||||||||| |||||||    
T  43187356 caatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaat 43187428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 25805862 - 25805775
Alignment:
Q  114 gacttttttatgctaaaattttactagaaaatcccacaaaatc--------tt--atttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||| |||||||||||||| |||||||||||||||||||        ||  ||||||||||||||||| |||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgat 25805775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 17001098 - 17001140
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  17001098 acaaaatccaatttattaaacaatccttcgaaatttgaatgat 17001140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 33892269 - 33892367
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||| |||| ||||||||||||||  || |||||||  |||| ||||| |   ||||||  ||||||| ||||||| |||||||||||||||||    
T  33892269 aaatctcatcttttaatgaaagactttttcttgttaaaattacactacaaaattcataaaaatccaatttatttaacaatcattcgaaatttgaatgat 33892367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 47066829 - 47066787
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  47066829 acaaaatccaatttattaaacaatccttcgaaatttgaatgat 47066787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 48117746 - 48117813
Alignment:
Q  220 agtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  48117746 agtcttgattgaatacctcaagacttttcaaaaatgacaaagagtcttgattgaataccacaagactt 48117813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 17001165 - 17001243
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || |||||| |||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  17001165 aagtgatgaaaagtctttattgaatacctcaagactttttaaaaatgacaaagagtcttgattgaataccacaagactt 17001243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 29893139 - 29893061
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||||||||||||||||| || |||       |||||||||||| ||||||||||||| ||||||||||    
T  29893139 aagtgatgaaaagtcttgattgaatacctcatgactgttttaaaatgacaaagagtcttgattgaataccacaagactt 29893061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 32143061 - 32143139
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||| ||||||| |||||       |||||||||| ||  || |||||||||||||||||||    
T  32143061 aagtgattaagagtcttgattcaataccataagactttttttaaatgacaaaaaaaatttattgaataacacaagactt 32143139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 283
Target Start/End: Complemental strand, 33382770 - 33382621
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||| ||||       ||||||  ||||       ||||||| || ||||||||||||||    
T  33382770 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttaaatgattttgaataccatgagactttttttaagtgatgaaaagtcttgattgaat 33382671  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaag 283  Q
    ||| ||||||       |||||||||||| ||||||||||||| ||||||    
T  33382670 acctcaagacttttttaaaatgacaaagagtcttgattgaataccacaag 33382621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 7993257 - 7993225
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||||||||||||||||||||||||||||    
T  7993257 atttattaaacaatccttcgaaatttgaatgat 7993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 10676505 - 10676537
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||||||||||||||||||||||||||||    
T  10676505 atttattaaacaatccttcgaaatttgaatgat 10676537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 18838522 - 18838472
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  ||||||||||||||| |||||||||||||||||    
T  18838522 aaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgat 18838472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 18838583 - 18838517
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| |||||| |||||||  || |||||||  |||| ||||||||||||||||    
T  18838583 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatc 18838517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 287
Target Start/End: Complemental strand, 29585558 - 29585495
Alignment:
Q  224 ttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||| ||||||       |||||||||||||||||||||||||| ||||| ||||    
T  29585558 ttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattgaataccacaaaactt 29585495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 39028155 - 39028080
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaaga 284  Q
    ||||||| || ||||||||||||||| | ||||||       |||||||||||| ||||||||||||| |||||||    
T  39028155 aagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaga 39028080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 39219518 - 39219552
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagac 243  Q
    |||||||||||||||||||||||||| ||||||||    
T  39219518 aagtgattaagagtcttgattgaataacacaagac 39219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 12963874 - 12963829
Alignment:
Q  111 aaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||  | ||||||||| |||||||||||||||||||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcccacaaaatc 12963829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 28034947 - 28035025
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||||||||||||||| | ||||||       |||||||||| | ||||||||||||| ||||||||||    
T  28034947 aagtgatgaaaagtcttgattgaatatctcaagacttttttaaaatgacaaaaagtcttgattgaataccacaagactt 28035025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 10617102 - 10617046
Alignment:
Q  100 atgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||||||||||||| ||  | ||||||| | ||||||||||| |||||||||    
T  10617102 atgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatc 10617046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 12963717 - 12963681
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  12963717 aaatgacaaagagtcttgattgaataccacaagactt 12963681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 44256851 - 44256883
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||||||||| |||||||||||||||||    
T  44256851 atttattaaacaatcattcgaaatttgaatgat 44256883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 282
Target Start/End: Complemental strand, 21222371 - 21222131
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||          
T  21222371 tagtaaaatcttaaaagaaaataacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 21222272  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        |||||||||||||||||||||||||||||||||||||       ||||| ||||||       |||||||||||||||||||||||||||||||||    
T  21222271 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaataccacaag 21222172  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
    ||       ||||||||||||||||||||||||||||||||    
T  21222171 actttttttaaatgacaaagaatcttgattgaataacacaa 21222131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 19451784 - 19452029
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  19451784 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 19451883  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| ||||||||||| |||||||||||||||||||       ||||||||||||       ||||||||||||||||||||| |||||||||||    
T  19451884 tcaaaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaataccacaag 19451983  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  19451984 actttttttaaatgacaaagaatcttgattgaataacacaagactt 19452029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 33025703 - 33025491
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||    
T  33025703 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaaaatctgatgtattaaacaatccttcaaaat 33025604  T
Q  183 ttgaatg-------ataccactagacnnnnnnnaagtgattaagag-tcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaa 274  Q
    |||||||       ||||||| ||||       ||||||||||||| | |||||||||||||||||||        ||||| ||||||||||||||||||    
T  33025603 ttgaatgattttgaataccacaagactttttttaagtgattaagagtttttgattgaataccacaagaatttttaaaaatgtcaaagaatcttgattgaa 33025504  T
Q  275 taacacaagactt 287  Q
    ||| |||| ||||    
T  33025503 taagacaaaactt 33025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 59 - 284
Target Start/End: Original strand, 50192526 - 50192769
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  50192526 tagtaaaatcttaaaagaaaaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 50192625  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 240  Q
     |||||||| ||||||||||||||||||| |||||||||||       ||||||||||||        ||||||||||||||||||||||||||||||||    
T  50192626 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaa 50192725  T
Q  241 gacnnnnnnnaaatgacaaagaatcttgattgaataacacaaga 284  Q
    |||       ||||||||| ||||||||||||||||||||||||    
T  50192726 gacttttttaaaatgacaaggaatcttgattgaataacacaaga 50192769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 45759985 - 45760231
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| || ||| ||||||| |||||||||||| ||||||||||||||             
T  45759985 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 45760084  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||| ||||||||       ||||||||||||       ||||||||||||||||||||||||||||||| |    
T  45760085 tcaaaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatg 45760184  T
Q  242 acnnnnnnnaaa-tgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       ||| ||||||||||||||||||||||||||||||||||    
T  45760185 actttttttaaattgacaaagaatcttgattgaataacacaagactt 45760231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 28824349 - 28824593
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||| ||| ||||||||  |||||||||||||             
T  28824349 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatcca 28824448  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||| ||||||||||||||||       ||||||| ||||       |||||||||||||||||||||||||||||||||    
T  28824449 tcaaaatctgatttattaaacaat-cttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaataccacaag 28824547  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||| ||||||||||||||||||||||||||    
T  28824548 actttttttaaatgacaaataatcttgattgaataacacaagactt 28824593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 287
Target Start/End: Original strand, 49198245 - 49198489
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||             
T  49198245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 49198344  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
     |||||||| |||||||||||||||||||||||||||||||       ||||||||  ||       ||||||||||||||||| ||||||||||||||     
T  49198345 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgaactttttttaagtgattaagagtctt-attgaataccacaaa 49198443  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||||||||||||||||||||||||||||    
T  49198444 actttttttaaatgacaaagaatcttgattgaataacacaagactt 49198489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 83 - 283
Target Start/End: Complemental strand, 35279872 - 35279655
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaat 172  Q
    |||| ||||||||||||||||||| |||||||||||||| ||| | |||||| |||||||||||||||||||||          | ||||||||||||||    
T  35279872 caattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35279773  T
Q  173 ccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||| ||||||       ||||||||||       |||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  35279772 ccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaataccacaagactttttttaaatgacaaagaatc 35279673  T
Q  266 ttgattgaataacacaag 283  Q
    ||||||||||||||||||    
T  35279672 ttgattgaataacacaag 35279655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 35679128 - 35679349
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||| ||||||||||||||| || |||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  35679128 caatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaat 35679227  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    |||||||||||||||||       |||||||  |||       ||||||||||||||||||||||||||| ||||||        |||||||||||||||    
T  35679228 ccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaatactacaagattttttttaaatgacaaagaatc 35679327  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||| ||||||||||    
T  35679328 ttgattgaataccacaagactt 35679349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 281
Target Start/End: Original strand, 6304252 - 6304468
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    ||||| |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  6304252 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6304351  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagag-tcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 264  Q
    |||||||||||||||||       ||||||||||||       ||||||||||||| | ||| ||||||||||||||||       ||||||||||||||    
T  6304352 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtttttggttgaataccacaagactttttttaaatgacaaagaat 6304451  T
Q  265 cttgattgaataacaca 281  Q
    |||||||||||||||||    
T  6304452 cttgattgaataacaca 6304468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 282
Target Start/End: Original strand, 47654327 - 47654568
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca--------- 149  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||| ||||||| ||||||||||||  ||||||||| |||             
T  47654327 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatcca 47654426  T
Q  150 -caaaatcttatttattaaacaatccttcgaaatttgaat-------gataccactagac-nnnnnnnaagtgattaagagtcttgattgaataccacaa 240  Q
     |||||||| ||||||||||||||||||||||||||||||        ||||||||||||        |||||||||||||| |||||||||||||||||    
T  47654427 tcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaataccacaa 47654526  T
Q  241 gacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
    |||       ||||||||||||||||||||||||||||||||    
T  47654527 gacttcttttaaatgacaaagaatcttgattgaataacacaa 47654568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 45536150 - 45535923
Alignment:
Q  83 caatcctaagaaatctcatgttttt------atgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttatta 166  Q
    ||||||||||||||||||||||||       |||||||||||||| |||||||||||| |||||||||||||||||||||          | ||||||||    
T  45536150 caatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 45536051  T
Q  167 aacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaa 259  Q
    ||||||| |||||||||||||||||       ||||||||||       ||| |||||||||||||||||||||||||||| ||       |||||||||    
T  45536050 aacaatctttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaacactttgtttaaatgacaa 45535951  T
Q  260 agaatcttgattgaataacacaagactt 287  Q
    ||||| ||||||||||||||||||||||    
T  45535950 agaatattgattgaataacacaagactt 45535923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 287
Target Start/End: Complemental strand, 47780935 - 47780690
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa------ 152  Q
    |||||||||||||||||       ||||| |||||||||||||||||| |||||| ||||||| ||| |||||||| |||||||||||||||||          
T  47780935 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatcca 47780836  T
Q  153 ----aatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
        ||||| ||||||||||||||||||  || ||||||||       ||| ||||||||       ||||||||||||||||||||||||||||||| |    
T  47780835 tcaaaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47780736  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||| | ||||||||||||||||||||||||||    
T  47780735 actttttttaaatgacatataatcttgattgaataacacaagactt 47780690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 88 - 287
Target Start/End: Complemental strand, 49418279 - 49418063
Alignment:
Q  88 ctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaatccttc 177  Q
    |||||||||||||| |||| |||||||| ||||| |||||||||||| | |||||||||||||||          ||||| ||||||||||||||||||     
T  49418279 ctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 49418180  T
Q  178 gaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgat 270  Q
    ||||||||||||       ||||||||||||       ||||||||||||||||| |||||||||||||  |        ||||||||| ||||||||||    
T  49418179 gaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacataattttttttaaatgacaatgaatcttgat 49418080  T
Q  271 tgaataacacaagactt 287  Q
    |||||||||||||||||    
T  49418079 tgaataacacaagactt 49418063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 730281 - 730127
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnn-aagtgattaagagtcttgattgaa 232  Q
    |||||||  |||||||| |||||||||||||| | ||||||||||||||||       ||||||||||        ||||||||||||||||||||||||    
T  730281 aaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaa 730182  T
Q  233 taccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||       |||||||||||||||||||||||||||||||||||||    
T  730181 taccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactt 730127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 29556305 - 29556083
Alignment:
Q  83 caatcctaagaaatctcatgttttt-atgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaa 171  Q
    ||||||||||||||||||||| ||| || ||||||||||| | |||||||||| | ||||||||||||          |||||||| |||||||||||||    
T  29556305 caatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaa 29556206  T
Q  172 tccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaat 264  Q
    || |||||||||||||||||       | |||||||        |||||||||||||||||||||||||| ||||||||       |||| |||| ||||    
T  29556205 tctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaataacacaagactttttttaaataacaatgaat 29556106  T
Q  265 cttgattgaataacacaagactt 287  Q
    ||| |||||||||||||||||||    
T  29556105 cttaattgaataacacaagactt 29556083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 953876 - 953798
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  953876 aagtgattaagagtcttgatcgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaagactt 953798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 37014640 - 37014713
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||    
T  37014640 caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatc 37014713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 32588963 - 32589026
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  32588963 aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatc 32589026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 22183427 - 22183349
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||||||||||||       |||||||||||||||||||||||||||||||| ||||    
T  22183427 aagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaataacacaaaactt 22183349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 31572174 - 31572315
Alignment:
Q  60 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca---------- 149  Q
    ||||||||||||||||       |||| ||||||||||||||| ||| |||||||||||||| || ||||||||| |||| |||||||||              
T  31572174 agtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccat 31572273  T
Q  150 caaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  31572274 caaaatctgatttattaaacaatccttcgaaatttaaatgat 31572315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 48668785 - 48668890
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaat 182  Q
    |||||| || ||||||||| |||| ||||||||||||||  || |||||||  |||| | ||||||||||||||  ||||||||||||||| ||||||||    
T  48668785 caatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatccaatttattaaacaatctttcgaaat 48668884  T
Q  183 ttgaat 188  Q
    ||||||    
T  48668885 ttgaat 48668890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 955900 - 955832
Alignment:
Q  123 atgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||||||| ||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||    
T  955900 atgctaaaatttcactagaaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgat 955832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 38536106 - 38536310
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaat- 188  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||| |||||||||||     
T  38536106 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaata 38536205  T
Q  189 ------gataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       |||| || || ||||||||||||||||| ||| ||       |||||||||||| ||||||||||||| |||||    
T  38536206 attttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaa 38536305  T
Q  283 gactt 287  Q
    |||||    
T  38536306 gactt 38536310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 38558324 - 38558528
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaat- 188  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||| |||||||||||     
T  38558324 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatcctttgaaatttgaata 38558423  T
Q  189 ------gataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       |||| || || ||||||||||||||||| ||| ||       |||||||||||| ||||||||||||| |||||    
T  38558424 attttgaataccacaagacttttgttaagtaatgaaaagtcttgattgaatacctcaaaacttttttaaaatgacaaagagtcttgattgaataccacaa 38558523  T
Q  283 gactt 287  Q
    |||||    
T  38558524 gactt 38558528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 28387400 - 28387614
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||||||||||||||||||| || |||||||  |||| |||||||||          |||||||  |||||||||||||||||||||    
T  28387400 aagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28387499  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| |||        || |||| || ||||||||||||||||| ||||||       ||||||||||||||||||||||    
T  28387500 aatttgaatgaatttgaataccacaagattttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattg 28387599  T
Q  273 aataacacaagactt 287  Q
    |||| || |||||||    
T  28387600 aataccaaaagactt 28387614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 9577432 - 9577505
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||| ||||||||||||||||| |||||||| ||||| || ||||||||| ||||||||||| |||||||||    
T  9577432 caatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatc 9577505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 287
Target Start/End: Original strand, 5495117 - 5495317
Alignment:
Q  94 aatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg---- 189  Q
    |||||||| |||| || || ||||||||  || |||||||  |||| ||||||||||||||||  |||||||||| ||||||| ||||||| ||||        
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaataatcctttgaaatttaaatgattt 5495216  T
Q  190 ---ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagact 286  Q
       ||||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| |||| |||||||| |||||||||    
T  5495217 tgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttaattgaataccacaagact 5495316  T
Q  287 t 287  Q
    |    
T  5495317 t 5495317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 287
Target Start/End: Complemental strand, 46328234 - 46328021
Alignment:
Q  91 agaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcgaa 180  Q
    |||||||| || |||||||||||||||||||  || |||||||  |||| ||||||||||||||||            ||| ||||||||||||||||||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  181 atttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattga 273  Q
    |||||||||||       ||||| ||||       ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||    
T  46328134 atttgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 46328035  T
Q  274 ataacacaagactt 287  Q
    ||| ||||||||||    
T  46328034 ataccacaagactt 46328021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 287
Target Start/End: Complemental strand, 18798615 - 18798470
Alignment:
Q  149 acaaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaag 241  Q
    ||||||||  |||||||||||||||||||||||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| ||||    
T  18798615 acaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaag 18798516  T
Q  242 acnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||       |||||||||||| ||||||||||||| ||||||||||    
T  18798515 acttttttaaaatgacaaagagtcttgattgaataccacaagactt 18798470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 29219469 - 29219368
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| |||||| |||||||  || |||||||  |||| |||||||  |||||||  |||||||||||||||||||  ||||||||||    
T  29219469 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatccatcaaaatccaatttattaaacaatccttcttaatttgaatg 29219370  T
Q  190 at 191  Q
    ||    
T  29219369 at 29219368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 286
Target Start/End: Complemental strand, 51701712 - 51701560
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaat 233  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||||       ||||||| ||||       || |||| || ||||||||||||||    
T  51701712 aaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaat 51701613  T
Q  234 accacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagact 286  Q
    ||| ||||||       |||||||||||| ||||||||||||| |||||||||    
T  51701612 acctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagact 51701560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 25612350 - 25612136
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || ||||||| ||||| ||||||||||||          ||||  |||||||||||||||||| ||    
T  25612350 aagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 25612251  T
Q  180 aatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 272  Q
    ||||||||||       ||||||| ||||       || |||| || | ||||||||||||||| ||||||       |||||||||||| |||||||||    
T  25612250 aatttgaatgattttgaataccacaagactttttttaaatgatgaaaaatcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 25612151  T
Q  273 aataacacaagactt 287  Q
    |||| ||||||||||    
T  25612150 aataccacaagactt 25612136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 47784542 - 47784471
Alignment:
Q  117 ttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaat 188  Q
    ||||| |||||||||||| ||||||||||| |||||||||  ||||||||||||||| || ||| |||||||    
T  47784542 tttttcatgctaaaatttaactagaaaatctcacaaaatccaatttattaaacaatctttagaagtttgaat 47784471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 49231000 - 49230865
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnna 251  Q
    |||||||||| ||||||||||||||||||||||       ||||| ||||       ||||||| || ||||||||||||||||| ||||||       |    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaa 49230901  T
Q  252 aatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||| ||||||||||||| ||||||||||    
T  49230900 aatgacaaagagtcttgattgaataccacaagactt 49230865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 287
Target Start/End: Complemental strand, 48524490 - 48524298
Alignment:
Q  112 aagacttttttatgctaaaattttactagaaaatcccacaaaat----------cttatttattaaacaatccttcgaaatttgaatg-------atacc 194  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||          || ||||||||||||||| ||| |||||||||||       ||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  195 actagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    || ||||       |||||||||||||| |||||| ||||||||| ||        |||||||||| ||||||||||||||||||||||||||    
T  48524390 acaagactttttttaagtgattaagagttttgattaaataccacatgaatttttttaaatgacaaaaaatcttgattgaataacacaagactt 48524298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 6312767 - 6312656
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatctt----------atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||            |||||||||||||||||||||    
T  6312767 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 6312668  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  6312667 aatttgaatgat 6312656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 14494224 - 14494188
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||||||||||||||||||||||||||||    
T  14494224 aaatgacaaagaatcttgattgaataacacaagactt 14494188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 29396395 - 29396506
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| |||||||||          |||||||  |||||||||||||||||||||    
T  29396395 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29396494  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  29396495 aatttgaatgat 29396506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 45272765 - 45272675
Alignment:
Q  93 aaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaattt 184  Q
    ||||||||| ||||||| ||||| |||||  || |||||||  |||| |||||| |||||||||  ||||||||||| ||||||||||||||    
T  45272765 aaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaaaatccaatttattaaac-atccttcgaaattt 45272675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 15835207 - 15835274
Alignment:
Q  220 agtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  15835207 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 15835274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 48177469 - 48177535
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||    
T  48177469 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 48177535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 8141271 - 8141349
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||| ||||    
T  8141271 aagtgatgaatagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaaaactt 8141349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 37014783 - 37014860
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagact 286  Q
    ||||||| |||| | ||||||||||||||||||||       |||||||||||| |||| |||||||| |||||||||    
T  37014783 aagtgatgaagaatattgattgaataccacaagacttcttctaaatgacaaagagtcttaattgaataccacaagact 37014860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 9322507 - 9322618
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc--------tt--atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||| ||||||        ||  ||||||||||||||||||| |    
T  9322507 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcta 9322606  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  9322607 aatttgaatgat 9322618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 48524865 - 48524805
Alignment:
Q  60 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagactttt 120  Q
    ||||||||||||||||       ||||||||| |||||||||||||| |||||||||||||    
T  48524865 agtaaaatcttaaaagaaaaaaccaatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 15835060 - 15835126
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||| ||||||    
T  15835060 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatc 15835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 31622527 - 31622577
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||| |||||||||  ||||||||||||||| || ||||||||||||||    
T  31622527 aaaatctcacaaaatccgatttattaaacaatcttttgaaatttgaatgat 31622577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 9577518 - 9577550
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||||||||||||| |||||||||||||    
T  9577518 atttattaaacaatccttctaaatttgaatgat 9577550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 32589039 - 32589071
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||||||||||||| |||||||||||||    
T  32589039 atttattaaacaatccttcaaaatttgaatgat 32589071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 47784444 - 47784408
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  47784444 aaatgacaaagagtcttgattgaataccacaagactt 47784408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 48177548 - 48177580
Alignment:
Q  159 atttattaaacaatccttcgaaatttgaatgat 191  Q
    ||||||||||||||| |||||||||||||||||    
T  48177548 atttattaaacaatcattcgaaatttgaatgat 48177580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 83 - 287
Target Start/End: Complemental strand, 102302 - 102079
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaa----------aatcttatttattaaacaat 172  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||          ||||| ||||||||||||||    
T  102302 caatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 102203  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga--cnnnnnnnaaatgacaaagaa 263  Q
    | |||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||||||||||  |       |||||||||||||    
T  102202 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactctttttttaaatgacaaagaa 102103  T
Q  264 tcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||| ||||    
T  102102 tcttgattgaataacacaaaactt 102079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 287
Target Start/End: Complemental strand, 100415 - 100197
Alignment:
Q  86 tcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaatcct 175  Q
    ||||||||||||||||||||| ||||||||||||||  || |||||||| ||||||||| |||||||||||          | |||||||||||||||||    
T  100415 tcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcct 100316  T
Q  176 tcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttg 268  Q
    | ||||||||||||||       ||||||||||       ||||||||||||||||||||||| |||||||||||       ||||||||||||||||||    
T  100315 ttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgagtaccacaagactttttttaaatgacaaagaatcttg 100216  T
Q  269 attgaataacacaagactt 287  Q
    |||||||||||||||||||    
T  100215 attgaataacacaagactt 100197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 38581 - 38781
Alignment:
Q  59 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc-- 156  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||      
T  38581 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 38680  T
Q  157 -------ttatttattaaacaatccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 242  Q
            |  |||||||||||||||||||||||||||||       ||||||||||||       ||||||||||||||||||||||||||||||||||    
T  38681 tcaaaatctgattattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaaga 38780  T
Q  243 c 243  Q
    |    
T  38781 c 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 287
Target Start/End: Original strand, 38895 - 39116
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatccca----------caaaatcttatttattaaacaat 172  Q
    |||||||||| ||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||          |||||||| ||||||||||||||    
T  38895 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 38994  T
Q  173 ccttcgaaatttgaatg-------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatc 265  Q
    ||||| |||||||||||       ||| ||||||||       ||||||||||||||||| |||||||||||||||||       |||||| ||||||||    
T  38995 ccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaataccacaagactttttttaaatgataaagaatc 39094  T
Q  266 ttgattgaataacacaagactt 287  Q
    ||||||||||| ||||||||||    
T  39095 ttgattgaataccacaagactt 39116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 84 - 287
Target Start/End: Original strand, 540 - 760
Alignment:
Q  84 aatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc----------ttatttattaaacaatc 173  Q
    |||||||||||||||||||||||  | ||||||||||| || | ||||||| |||||||||| ||||||||||          | |||||||||||||||    
T  540 aatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatc 639  T
Q  174 cttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatct 266  Q
    |||| |||||||||||||       ||||||| |        |||||||||||||| ||||||||||||||||| ||       ||||||||||||||||    
T  640 cttccaaatttgaatgattttgaataccactaaaaaaaatttaagtgattaagagttttgattgaataccacaatactttttttaaatgacaaagaatct 739  T
Q  267 tgattgaataacacaagactt 287  Q
    |||||||||||||||||||||    
T  740 tgattgaataacacaagactt 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 14967 - 14878
Alignment:
Q  83 caatcctaagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaat 172  Q
    ||||| ||||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||  ||||||||||||||    
T  14967 caatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaatttattaaacaat 14878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 14072 - 13868
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  |  ||||||   |||| |||||||  |||||||  ||||||||||||||| || ||||||||||||    
T  14072 aagaaatctcatcttttcatgaaagactttttcttattaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatg 13973  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||||||||||||||||| ||| ||       |||||||||||| ||||||||||||| |||||    
T  13972 attttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaataccacaa 13873  T
Q  283 gactt 287  Q
    |||||    
T  13872 gactt 13868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 287
Target Start/End: Original strand, 21255 - 21459
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatg 189  Q
    |||||||||||| |||| ||||||||||||||  |  ||||||   |||| |||||||  |||||||  ||||||||||||||| || ||||||||||||    
T  21255 aagaaatctcatcttttcatgaaagactttttcttattaaaatcccactacaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatg 21354  T
Q  190 -------ataccactagacnnnnnnnaagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaa 282  Q
           ||||||| ||||       ||||||| || ||||||||||||||||| ||| ||       |||||||||||| ||||||||||||| |||||    
T  21355 attttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaatacttttttaaaatgacaaagagtcttgattgaataccacaa 21454  T
Q  283 gactt 287  Q
    |||||    
T  21455 gactt 21459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 10613 - 10546
Alignment:
Q  220 agtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||| ||||||       |||||||||||| ||||||||||||| ||||||||||    
T  10613 agtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattgaataccacaagactt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 191
Target Start/End: Complemental strand, 10760 - 10649
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc--------tt--atttattaaacaatccttcga 179  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||| ||||||        ||  |||||||||||||||||| ||    
T  10760 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcctttga 10661  T
Q  180 aatttgaatgat 191  Q
    ||||||||||||    
T  10660 aatttgaatgat 10649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 4330 - 4186
Alignment:
Q  150 caaaatcttatttattaaacaatccttcgaaatttgaatgat-------accactagacnnnnnnnaagtgattaagagtcttgattgaataccacaaga 242  Q
    |||||||  ||||||||||||||||||| |||||||||||||       ||||| ||||       || |||| || ||||||||||||||||| |||||    
T  4330 caaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 4231  T
Q  243 cnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |       |||| ||||||| ||||||||||||| ||||||||||    
T  4230 cttttttaaaattacaaagagtcttgattgaataccacaagactt 4186  T

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Target: scaffold0651 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 8784 - 8748
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||||||||||||||||| |||||||||||||||    
T  8784 aaatgacaaagaatcttgattaaataacacaagactt 8748  T

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Target: scaffold1504 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 1063 - 997
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| ||||||||||||||   | |||||||  |||| ||||||||||||||||    
T  1063 aagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatc 997  T

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Target: scaffold1504; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 927 - 849
Alignment:
Q  209 aagtgattaagagtcttgattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaataacacaagactt 287  Q
    ||||||| || ||||||||||||||||| || ||        |||||||||||| ||||||||||||| ||||||||||    
T  927 aagtgatgaaaagtcttgattgaatacctcatgatttttttaaaatgacaaagagtcttgattgaataccacaagactt 849  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 39624 - 39690
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||| || |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||    
T  39624 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 39690  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 36914 - 36980
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    ||||||||| || |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||    
T  36914 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatc 36980  T

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Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 37050 - 37086
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  37050 aaatgacaaagagtcttgattgaatagcacaagactt 37086  T

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Target: scaffold0042 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 58083 - 58149
Alignment:
Q  90 aagaaatctcatgtttttatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatc 156  Q
    |||||||||||| |||| |||||||| ||| |  || ||||||| ||||| ||||||||||||||||    
T  58083 aagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatc 58149  T

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Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 58144 - 58194
Alignment:
Q  141 aaaatcccacaaaatcttatttattaaacaatccttcgaaatttgaatgat 191  Q
    |||||||  |||||||  ||||||||||||||| |||||||||||||||||    
T  58144 aaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgat 58194  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 233759 - 233723
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  233759 aaatgacaaagagtcttgattgaataccacaagactt 233723  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 234607 - 234571
Alignment:
Q  251 aaatgacaaagaatcttgattgaataacacaagactt 287  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  234607 aaatgacaaagagtcttgattgaataccacaagactt 234571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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