View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18664_high_14 (Length: 427)
Name: NF18664_high_14
Description: NF18664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18664_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 18 - 422
Target Start/End: Original strand, 36550368 - 36550772
Alignment:
| Q |
18 |
gtaacatttaggacaaccaacaagaaccatctcctttgtaattgcgtttgcatactgcgctacattatcttcttttgtctccgtcgaggctccttgatca |
117 |
Q |
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| T |
36550368 |
gtaacatttaggacaaccaacaagaaccatctcctttgtaattgcgtttgcatactgcgctacattatcttcttttgtctccgtcgaggctccttgatca |
36550467 |
T |
|
| Q |
118 |
tgaacagtcatctttgatgaatatgatattgaagacgaggatgaacatggtgacaccaaccccggcaagtgatcaactgacgatgatttcgattcctctg |
217 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36550468 |
tgaacagtcatctttgatgaatttgatattgaagacgaggatgaacatggtgacaccaaccccggcaagtgatcaactgacgatgatttcgattcctctg |
36550567 |
T |
|
| Q |
218 |
gtgatggatgcctcaattccaaccctcgactctttcttttgctcattgtgtgtagatgtcaagttaacccttaattttcaagcaaaataattgttactct |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36550568 |
gtgatggatgcctcaattccaaccctcgactctttcttttgctcattgtgtgtagatgtcaagttaacccttaattttcaagcaaaataattgttactct |
36550667 |
T |
|
| Q |
318 |
aaaaatgtagatctaattgtaagaagaagaaaagacaagatgaatacaatggcactcgtgtagtttggttggttatatatccctcatccaatgaatcaat |
417 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36550668 |
aaaaatgtagatctaattataagaagaagaaaagacaagatgaatacaatggcactcgtgtagtttggttggttatatatccctcatccaatgaatcaat |
36550767 |
T |
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| Q |
418 |
gacat |
422 |
Q |
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| T |
36550768 |
gacat |
36550772 |
T |
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