View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18664_high_38 (Length: 249)
Name: NF18664_high_38
Description: NF18664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18664_high_38 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 12515232 - 12515452
Alignment:
| Q |
5 |
ttgagacgaaatttttagatattaatttcatctgcaatattatttatctagttgttttcaattttgcagtactcattggattttgtgtatctaagtgtag |
104 |
Q |
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| T |
12515232 |
ttgagacgaaatttttagatattaatttcatctgcaatattatttatctagttgttttcaattttgcagtactcattggattttgtgtatctaagtgtag |
12515331 |
T |
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| Q |
105 |
caatattattttcatcttggacaggtatgaaaattatttatttatagttttaatactagtaccttagttgaaattaaaataatcctataatcaaaattga |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12515332 |
caatattattttcatcttggacaggtatgaaaattatttatttatagttttaatactagtaccttagttgaaattaaaataatcctataatcaaaattga |
12515431 |
T |
|
| Q |
205 |
tatgtatgaatctaatgttta |
225 |
Q |
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| T |
12515432 |
tctgtatgaatctaatgttta |
12515452 |
T |
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