View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18664_high_39 (Length: 247)
Name: NF18664_high_39
Description: NF18664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18664_high_39 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 6528137 - 6527930
Alignment:
| Q |
17 |
aatataacaatgagagcaaatagaatgaagtctttcatattcgccgatataaaagcaaaggttaatgctacatatagcgaaaaatttgtcccgaggatat |
116 |
Q |
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| T |
6528137 |
aatataacaatgagagcaaatagaatgaagtctttcatattcgccgatataaaagcaaaggttaatgctacatatagcgaaaaatttgtcccgaggatat |
6528038 |
T |
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| Q |
117 |
cccgacactgacatgtgtactgagcgaattctagtacttagttccaaccacccatgtattgtgtgatatgaagatccaatggtgatgctacgttcgcaat |
216 |
Q |
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||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6528037 |
cccgacactgacatgtgtattgagcaaattctagtacttagttccaaccacccatgtattgtgtgatatgaagatccaatggtgatgctacgttcgcaat |
6527938 |
T |
|
| Q |
217 |
gcattgtg |
224 |
Q |
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|||||||| |
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| T |
6527937 |
gcattgtg |
6527930 |
T |
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