View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18664_low_31 (Length: 300)
Name: NF18664_low_31
Description: NF18664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18664_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 16 - 283
Target Start/End: Original strand, 33863874 - 33864140
Alignment:
| Q |
16 |
atcaattaggttagtttgctaccaacttaccaagagacaacaaaaatatgtgaagcctgattgtatcaaaaaataagaaatatgaatgagacattataaa |
115 |
Q |
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| T |
33863874 |
atcaattaggttagtttgctaccaacttaccaagagacaacaaaaatatgtgaagactgattgtatcaaaa-ataagaaatatgaatgagacattataaa |
33863972 |
T |
|
| Q |
116 |
aggttgaagatgccaaacagagatattgttggcctgcgaggacgaggccatgtggtgaggtaacttaaaaatgctatagcatttaatacacgtaaactat |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
33863973 |
aggttgaagatgccaaacagagatattgttggcctgcgaggacgaggccatgtggtgaggttacttaaaaatgctatagcatttaatacacgtaaactat |
33864072 |
T |
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| Q |
216 |
attctatagttgctggaaaatactcatgtgtgatgagtcatgtatagctagctagtaccttcagtcct |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33864073 |
attctatagttgctggaaaatactcatgtgtgatgagtcatgtatagctagctagtaccttcagtcct |
33864140 |
T |
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