View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18664_low_40 (Length: 260)
Name: NF18664_low_40
Description: NF18664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18664_low_40 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 29862987 - 29863220
Alignment:
| Q |
11 |
aagaaccacatcataagnnnnnnnnaatagacaaatgtaagttttaagtaaaaccacccacaagttaacttgatataagactttatgcagatatccatct |
110 |
Q |
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| T |
29862987 |
aagaaccacatcataagttttttttaatagacaaatgtaagttttaagtaaaaccacccacaagttaacttgatataagactttatgcagatatccatct |
29863086 |
T |
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| Q |
111 |
tgacattggctcatagcatagcattcgatccatctgttactccatctaaagataagtttattctgatgcattattacacattaaatatagatacatcttt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29863087 |
tgacattggctcatagcatagcattcgatccatctgttactccatctaaagataagtttattctgatgcattattacacattaaatatagatacatcttt |
29863186 |
T |
|
| Q |
211 |
ttatttcagatttggatgttgattcaataagtat |
244 |
Q |
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||||||| |||||||||||||||||||||||||| |
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| T |
29863187 |
ttatttccgatttggatgttgattcaataagtat |
29863220 |
T |
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