View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18664_low_51 (Length: 242)
Name: NF18664_low_51
Description: NF18664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18664_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 43568277 - 43568489
Alignment:
| Q |
16 |
atcaaccatacatccataatgttccaatctcggctctaacctataatcccttttcatgctttcaaatatttcttgacccttttctaccagccctccatga |
115 |
Q |
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| T |
43568277 |
atcaaccatacatccataatgttccaatctcggctctaacctataatcccttttcatgctttcaaatatttcttgacccttttctaccagccctccatga |
43568376 |
T |
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| Q |
116 |
ctataagctttcaaaaccgctgtaaaagtaatatctctaggaactatcccatttttcaccattacataaaaatactcaagcgcttcctctgcataaccat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43568377 |
ctataagctttcaaaaccgctgtaaaagtaatatctctaggaactatcccatttttcaccattacataaaaatactcaagcgcttcctctgcataaccat |
43568476 |
T |
|
| Q |
216 |
gcatagctactcc |
228 |
Q |
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||||||||||||| |
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| T |
43568477 |
gcatagctactcc |
43568489 |
T |
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