View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18665_low_26 (Length: 236)
Name: NF18665_low_26
Description: NF18665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18665_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 8411507 - 8411728
Alignment:
| Q |
1 |
agatacttgtgtcgcttatcatttgagtcaaccaaatgttaatttataaaattattactcacgctaatgtgatgtgatccaagatgttaatctcatctat |
100 |
Q |
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| T |
8411507 |
agatacttggatcgcttatcatttgagtcaaccaagtgttaatttataaaactattactcacgctaatgtgatgtgatccaagatgttaatctcatctat |
8411606 |
T |
|
| Q |
101 |
cacaaactagccaaccaattcacgttcaacgccatctttatcctatgagttttatcataaaaagtgttgcttgactcctctccttgaattcgaaaattga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8411607 |
cacaaactagccaaccaattcacgttcaacgccatctttatcctctgagttttatcataaaaagtgttgcttgactcctctccttgaattcgaaaattga |
8411706 |
T |
|
| Q |
201 |
ggtccttgcatacctctttgtt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
8411707 |
ggtccttgcatacctctttgtt |
8411728 |
T |
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