View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18666_high_5 (Length: 214)
Name: NF18666_high_5
Description: NF18666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18666_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 50 - 201
Target Start/End: Complemental strand, 54146129 - 54145978
Alignment:
| Q |
50 |
tttgagcttgattccaagcgtgtggtggatattatttacactagttagttcgacatctcaattttcaatgacattattttagattgtgagtgcattttat |
149 |
Q |
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| T |
54146129 |
tttgagcttgattccaagcgtgtggtggatattatttacactagttagtccgacatctcaattttcaatgacattattttagattgtaagtgcattttat |
54146030 |
T |
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| Q |
150 |
cgaacaactttaggaactctcatgttgagttcgttcggaaacaaggtagtga |
201 |
Q |
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| T |
54146029 |
cgaacaactttaggaactctcatgttgagttcgttcggaaacaaggtagtga |
54145978 |
T |
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