View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18666_low_4 (Length: 369)
Name: NF18666_low_4
Description: NF18666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18666_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 91 - 354
Target Start/End: Original strand, 42882341 - 42882604
Alignment:
| Q |
91 |
aacagaaatgtggaggatttacagtgaaagttgagcatgactctttgagtcattttaatatagtggatgctgattttggagacatctatgttagatttga |
190 |
Q |
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| T |
42882341 |
aacagaaatgtggaggatttacagtgaaagttgagcatgactctttgagtcattttaatatagtggatgctgattttggagacatctatgttagatttga |
42882440 |
T |
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| Q |
191 |
agaagtgctcaattccatcataggtgagtgttcttattttcaaaataaattgccaagtcggatgaagttatttagtagaggggtgtacattacattacat |
290 |
Q |
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| T |
42882441 |
agaagtgctcaattccatcataggtgagtgttcttattttcaaaataaattgccaagtcggatgaagttatttagtagaggggtgtacgttacattacat |
42882540 |
T |
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| Q |
291 |
gatatttaannnnnnngacgcaatgttaagctacatgatgaatatcaattaaactgtatttttt |
354 |
Q |
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| T |
42882541 |
gatatttaatttttttgacgcaatgttaagctacatgatgaatatcaattaaactgtatttttt |
42882604 |
T |
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