View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18667_low_2 (Length: 690)

Name: NF18667_low_2
Description: NF18667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18667_low_2
NF18667_low_2
[»] chr1 (42 HSPs)
chr1 (285-690)||(50444565-50444970)
chr1 (18-157)||(50444283-50444422)
chr1 (330-534)||(27814292-27814497)
chr1 (322-534)||(15072693-15072906)
chr1 (287-537)||(35943315-35943566)
chr1 (371-534)||(45584960-45585125)
chr1 (311-534)||(46111388-46111604)
chr1 (400-519)||(52628855-52628974)
chr1 (322-479)||(46110337-46110494)
chr1 (322-534)||(14470856-14471069)
chr1 (430-534)||(34351968-34352072)
chr1 (325-508)||(16963860-16964043)
chr1 (297-534)||(14477668-14477907)
chr1 (339-508)||(49802816-49802985)
chr1 (425-534)||(52627515-52627625)
chr1 (423-508)||(44278354-44278439)
chr1 (422-534)||(15071342-15071454)
chr1 (423-534)||(24499660-24499771)
chr1 (323-534)||(41873875-41874087)
chr1 (331-534)||(41872576-41872780)
chr1 (424-530)||(50442628-50442734)
chr1 (325-508)||(15233949-15234131)
chr1 (423-534)||(16123287-16123398)
chr1 (423-534)||(23091351-23091462)
chr1 (287-508)||(46467172-46467393)
chr1 (425-520)||(51042350-51042444)
chr1 (311-508)||(16965018-16965217)
chr1 (293-417)||(48527652-48527775)
chr1 (287-508)||(15232778-15233000)
chr1 (314-386)||(50442752-50442825)
chr1 (287-492)||(44999329-44999535)
chr1 (312-418)||(18821632-18821738)
chr1 (322-498)||(30535573-30535749)
chr1 (423-508)||(44276148-44276233)
chr1 (322-380)||(12665944-12666003)
chr1 (322-365)||(38280999-38281042)
chr1 (322-371)||(21507229-21507277)
chr1 (338-411)||(48492853-48492925)
chr1 (313-369)||(32693302-32693358)
chr1 (470-534)||(33369247-33369311)
chr1 (441-533)||(35942238-35942330)
chr1 (322-397)||(52078047-52078123)
[»] chr3 (50 HSPs)
chr3 (285-534)||(18197147-18197389)
chr3 (18-157)||(18197534-18197673)
chr3 (325-534)||(34818086-34818295)
chr3 (325-534)||(40244187-40244395)
chr3 (371-534)||(38242468-38242632)
chr3 (325-534)||(38240906-38241114)
chr3 (322-534)||(53624266-53624477)
chr3 (427-534)||(12107992-12108099)
chr3 (317-534)||(53194769-53194986)
chr3 (371-508)||(3208510-3208648)
chr3 (404-520)||(50810819-50810936)
chr3 (404-520)||(50864928-50865045)
chr3 (325-508)||(41263664-41263847)
chr3 (321-498)||(10730921-10731098)
chr3 (424-534)||(37735306-37735416)
chr3 (325-508)||(53420342-53420527)
chr3 (469-534)||(3209982-3210047)
chr3 (404-520)||(50809435-50809552)
chr3 (404-520)||(50866310-50866427)
chr3 (426-534)||(37736089-37736197)
chr3 (423-534)||(53421766-53421877)
chr3 (335-508)||(27837946-27838118)
chr3 (381-536)||(18442250-18442401)
chr3 (424-533)||(18458663-18458772)
chr3 (381-536)||(19487324-19487475)
chr3 (325-508)||(35372066-35372248)
chr3 (421-533)||(41544663-41544775)
chr3 (297-511)||(42684899-42685114)
chr3 (424-534)||(36176512-36176623)
chr3 (423-534)||(40364319-40364430)
chr3 (424-533)||(23443463-23443572)
chr3 (325-394)||(3209873-3209943)
chr3 (444-534)||(34819310-34819400)
chr3 (336-509)||(40745384-40745557)
chr3 (400-534)||(53187559-53187692)
chr3 (325-508)||(26887462-26887645)
chr3 (371-496)||(53622700-53622827)
chr3 (471-534)||(12105290-12105353)
chr3 (423-479)||(12106629-12106685)
chr3 (347-498)||(53612907-53613058)
chr3 (312-390)||(7270467-7270546)
chr3 (287-417)||(21074148-21074279)
chr3 (469-511)||(8796364-8796406)
chr3 (423-480)||(36175317-36175374)
chr3 (371-508)||(3455577-3455715)
chr3 (322-508)||(24403265-24403452)
chr3 (312-372)||(40892319-40892379)
chr3 (371-498)||(53614225-53614353)
chr3 (482-526)||(10301882-10301926)
chr3 (311-394)||(35371048-35371132)
[»] chr5 (31 HSPs)
chr5 (322-534)||(325089-325301)
chr5 (306-536)||(27705202-27705434)
chr5 (371-534)||(22047732-22047897)
chr5 (327-534)||(30859078-30859288)
chr5 (322-534)||(39603853-39604068)
chr5 (325-533)||(39605375-39605584)
chr5 (347-534)||(30857800-30857987)
chr5 (287-520)||(22308667-22308901)
chr5 (344-508)||(30912088-30912252)
chr5 (423-511)||(22049141-22049229)
chr5 (427-534)||(15941274-15941380)
chr5 (293-417)||(1102736-1102859)
chr5 (287-508)||(30910767-30910990)
chr5 (322-520)||(32757839-32758039)
chr5 (322-463)||(324109-324252)
chr5 (374-520)||(8521269-8521414)
chr5 (371-520)||(1010318-1010466)
chr5 (453-522)||(24509071-24509140)
chr5 (453-520)||(24503198-24503265)
chr5 (475-534)||(41798004-41798063)
chr5 (423-539)||(15548235-15548348)
chr5 (322-508)||(33173862-33174050)
chr5 (423-534)||(34894149-34894260)
chr5 (469-511)||(11262279-11262321)
chr5 (469-508)||(9169612-9169651)
chr5 (470-508)||(20538079-20538117)
chr5 (484-533)||(324068-324117)
chr5 (322-363)||(20539249-20539290)
chr5 (451-520)||(32759081-32759150)
chr5 (453-534)||(34898986-34899067)
chr5 (371-508)||(8523698-8523836)
[»] scaffold0031 (2 HSPs)
scaffold0031 (287-534)||(125098-125349)
scaffold0031 (287-534)||(123969-124215)
[»] chr4 (62 HSPs)
chr4 (322-534)||(1587182-1587395)
chr4 (287-534)||(1794411-1794661)
chr4 (322-534)||(6348155-6348367)
chr4 (322-534)||(1829753-1829966)
chr4 (347-534)||(393566-393754)
chr4 (424-534)||(37882834-37882944)
chr4 (371-532)||(6349504-6349667)
chr4 (423-534)||(1831268-1831379)
chr4 (310-548)||(52239863-52240104)
chr4 (381-534)||(1188843-1188996)
chr4 (302-533)||(27850819-27851047)
chr4 (400-534)||(37884259-37884393)
chr4 (425-534)||(24426339-24426448)
chr4 (331-535)||(42810115-42810320)
chr4 (423-540)||(390211-390328)
chr4 (405-534)||(2310923-2311052)
chr4 (322-534)||(44503582-44503794)
chr4 (322-534)||(2312383-2312598)
chr4 (325-534)||(40792751-40792958)
chr4 (410-534)||(4128993-4129117)
chr4 (423-534)||(42871095-42871206)
chr4 (325-511)||(52963592-52963778)
chr4 (322-534)||(53205386-53205599)
chr4 (337-508)||(52241075-52241245)
chr4 (349-534)||(11968511-11968698)
chr4 (334-508)||(23203869-23204043)
chr4 (322-536)||(27847676-27847889)
chr4 (427-533)||(42872308-42872414)
chr4 (287-547)||(15449942-15450204)
chr4 (425-520)||(1588096-1588191)
chr4 (348-508)||(10168711-10168873)
chr4 (424-534)||(44501518-44501628)
chr4 (423-544)||(1190197-1190318)
chr4 (322-517)||(53432079-53432275)
chr4 (322-517)||(53435656-53435852)
chr4 (423-534)||(31968397-31968508)
chr4 (334-498)||(7708704-7708868)
chr4 (423-536)||(31965833-31965946)
chr4 (311-508)||(13165522-13165718)
chr4 (322-508)||(7707614-7707803)
chr4 (423-508)||(10167451-10167536)
chr4 (423-534)||(4871369-4871480)
chr4 (322-508)||(13533165-13533350)
chr4 (322-510)||(49342643-49342832)
chr4 (15-99)||(53701559-53701647)
chr4 (325-397)||(2311090-2311163)
chr4 (348-506)||(33232629-33232785)
chr4 (404-511)||(54485530-54485638)
chr4 (287-397)||(44498598-44498709)
chr4 (424-534)||(49344015-49344126)
chr4 (451-520)||(669678-669747)
chr4 (407-508)||(23201872-23201973)
chr4 (423-496)||(50546944-50547017)
chr4 (287-390)||(7053321-7053425)
chr4 (377-508)||(33231415-33231547)
chr4 (404-510)||(54484336-54484444)
chr4 (322-417)||(56085465-56085560)
chr4 (349-418)||(4871610-4871680)
chr4 (381-498)||(50548188-50548303)
chr4 (371-500)||(40723262-40723390)
chr4 (322-397)||(4714157-4714233)
chr4 (287-371)||(56000448-56000532)
[»] chr7 (41 HSPs)
chr7 (314-534)||(47454337-47454557)
chr7 (326-534)||(32256304-32256511)
chr7 (322-534)||(6173356-6173566)
chr7 (334-520)||(41079751-41079936)
chr7 (322-520)||(32255003-32255204)
chr7 (322-533)||(43460725-43460938)
chr7 (290-534)||(47059108-47059357)
chr7 (423-534)||(33096869-33096980)
chr7 (325-534)||(43459455-43459664)
chr7 (424-534)||(47456381-47456491)
chr7 (296-534)||(40508378-40508618)
chr7 (424-527)||(30333292-30333395)
chr7 (322-542)||(40509637-40509858)
chr7 (423-534)||(30310121-30310232)
chr7 (424-534)||(45455378-45455488)
chr7 (322-542)||(22115067-22115289)
chr7 (325-508)||(11501206-11501389)
chr7 (322-534)||(4299951-4300164)
chr7 (374-508)||(30334597-30334727)
chr7 (424-534)||(32602933-32603043)
chr7 (347-508)||(40812542-40812703)
chr7 (297-534)||(47060354-47060591)
chr7 (424-533)||(46835676-46835785)
chr7 (423-534)||(45454038-45454149)
chr7 (339-508)||(22538769-22538938)
chr7 (314-387)||(22691116-22691190)
chr7 (445-534)||(30311496-30311585)
chr7 (335-448)||(22337288-22337401)
chr7 (424-510)||(11344531-11344614)
chr7 (331-498)||(13564150-13564319)
chr7 (302-534)||(4298713-4298948)
chr7 (480-534)||(40811340-40811394)
chr7 (288-511)||(3413555-3413779)
chr7 (322-508)||(9662141-9662326)
chr7 (439-534)||(33779105-33779200)
chr7 (310-397)||(40811458-40811546)
chr7 (376-520)||(41078770-41078915)
chr7 (338-416)||(44554687-44554764)
chr7 (322-418)||(669292-669387)
chr7 (325-418)||(35295816-35295909)
chr7 (423-511)||(3414839-3414927)
[»] chr8 (47 HSPs)
chr8 (322-534)||(32798434-32798648)
chr8 (325-534)||(44076267-44076479)
chr8 (287-519)||(22551022-22551254)
chr8 (325-534)||(32693830-32694039)
chr8 (334-533)||(41629709-41629908)
chr8 (324-534)||(30786676-30786888)
chr8 (290-539)||(42870808-42871060)
chr8 (371-534)||(42872143-42872305)
chr8 (325-511)||(45279703-45279889)
chr8 (325-508)||(42100013-42100196)
chr8 (423-534)||(26696532-26696643)
chr8 (325-534)||(32797138-32797350)
chr8 (287-534)||(45281056-45281304)
chr8 (303-511)||(6397806-6398014)
chr8 (404-520)||(28420159-28420276)
chr8 (322-534)||(32695176-32695391)
chr8 (306-534)||(4810469-4810695)
chr8 (423-534)||(41630129-41630240)
chr8 (404-520)||(28418820-28418937)
chr8 (381-498)||(26697796-26697912)
chr8 (325-508)||(13116356-13116539)
chr8 (423-534)||(8570118-8570229)
chr8 (422-494)||(29103527-29103599)
chr8 (317-534)||(239426-239643)
chr8 (317-534)||(792781-792998)
chr8 (423-534)||(30787605-30787716)
chr8 (424-534)||(212718-212828)
chr8 (424-534)||(726341-726451)
chr8 (424-534)||(798842-798952)
chr8 (376-508)||(8571574-8571707)
chr8 (439-534)||(13197962-13198057)
chr8 (424-503)||(29104371-29104450)
chr8 (424-533)||(6398503-6398613)
chr8 (489-534)||(12850466-12850511)
chr8 (423-517)||(211612-211706)
chr8 (423-517)||(240550-240644)
chr8 (423-517)||(725235-725329)
chr8 (423-517)||(793905-793999)
chr8 (400-508)||(17339531-17339639)
chr8 (287-397)||(14840767-14840878)
chr8 (451-534)||(17702308-17702391)
chr8 (311-417)||(24192555-24192661)
chr8 (311-417)||(24305160-24305266)
chr8 (423-508)||(45437487-45437572)
chr8 (311-418)||(9854772-9854879)
chr8 (424-508)||(17338067-17338151)
chr8 (287-371)||(34617066-34617150)
[»] chr2 (37 HSPs)
chr2 (322-534)||(28562713-28562925)
chr2 (371-534)||(11317320-11317484)
chr2 (424-533)||(43034477-43034586)
chr2 (297-534)||(43033082-43033319)
chr2 (325-534)||(32470482-32470691)
chr2 (347-534)||(17460613-17460800)
chr2 (371-534)||(32469148-32469313)
chr2 (311-533)||(42641752-42641975)
chr2 (347-534)||(11315933-11316120)
chr2 (287-534)||(6030337-6030586)
chr2 (425-536)||(28561366-28561477)
chr2 (348-532)||(7436469-7436652)
chr2 (439-534)||(7437782-7437877)
chr2 (425-534)||(17459253-17459362)
chr2 (325-508)||(1083014-1083197)
chr2 (287-394)||(34513421-34513529)
chr2 (371-543)||(11547650-11547824)
chr2 (327-508)||(29219411-29219595)
chr2 (327-508)||(29332710-29332894)
chr2 (322-520)||(2277372-2277571)
chr2 (322-508)||(18616907-18617096)
chr2 (322-520)||(34147150-34147350)
chr2 (442-518)||(12359703-12359779)
chr2 (424-534)||(36011648-36011757)
chr2 (325-417)||(6028834-6028926)
chr2 (423-508)||(6030631-6030716)
chr2 (423-508)||(44191162-44191247)
chr2 (322-451)||(6032217-6032347)
chr2 (442-533)||(36010578-36010669)
chr2 (470-508)||(29220928-29220966)
chr2 (470-508)||(29334227-29334265)
chr2 (470-520)||(37956963-37957013)
chr2 (615-669)||(41099465-41099519)
chr2 (451-520)||(2276295-2276364)
chr2 (451-520)||(34148393-34148462)
chr2 (328-372)||(12095439-12095483)
chr2 (482-522)||(23233760-23233800)
[»] scaffold0034 (2 HSPs)
scaffold0034 (325-534)||(109652-109861)
scaffold0034 (423-534)||(108513-108624)
[»] scaffold0077 (2 HSPs)
scaffold0077 (325-530)||(52596-52801)
scaffold0077 (322-534)||(54086-54301)
[»] scaffold1152 (1 HSPs)
scaffold1152 (347-520)||(2404-2577)
[»] chr6 (24 HSPs)
chr6 (334-498)||(23397270-23397434)
chr6 (423-534)||(6452516-6452627)
chr6 (439-534)||(34023886-34023981)
chr6 (427-514)||(34024073-34024160)
chr6 (325-498)||(29380227-29380400)
chr6 (322-534)||(7311627-7311840)
chr6 (404-520)||(232190-232305)
chr6 (325-498)||(17839046-17839219)
chr6 (348-508)||(5186594-5186753)
chr6 (425-534)||(15730036-15730146)
chr6 (423-511)||(6452307-6452395)
chr6 (322-508)||(29381632-29381820)
chr6 (424-536)||(27967055-27967167)
chr6 (442-536)||(27082168-27082263)
chr6 (287-498)||(23392250-23392464)
chr6 (404-520)||(233554-233666)
chr6 (371-511)||(12669746-12669886)
chr6 (424-533)||(27080925-27081034)
chr6 (327-498)||(17837652-17837825)
chr6 (376-534)||(7310276-7310433)
chr6 (424-508)||(6701406-6701490)
chr6 (400-508)||(6702853-6702960)
chr6 (470-508)||(2687976-2688014)
chr6 (470-508)||(18346802-18346840)
[»] scaffold0201 (1 HSPs)
scaffold0201 (323-534)||(21127-21339)
[»] scaffold0118 (1 HSPs)
scaffold0118 (322-527)||(43476-43684)
[»] scaffold2071 (1 HSPs)
scaffold2071 (294-389)||(556-652)
[»] scaffold0078 (1 HSPs)
scaffold0078 (423-533)||(18813-18923)
[»] scaffold0219 (1 HSPs)
scaffold0219 (311-418)||(8083-8189)
[»] scaffold1251 (1 HSPs)
scaffold1251 (451-520)||(1118-1187)
[»] scaffold0013 (1 HSPs)
scaffold0013 (287-433)||(32672-32822)
[»] scaffold0011 (1 HSPs)
scaffold0011 (322-508)||(127459-127646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (424-520)||(61865-61961)


Alignment Details
Target: chr1 (Bit Score: 370; Significance: 0; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 285 - 690
Target Start/End: Original strand, 50444565 - 50444970
Alignment:
Q  285 attagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttg 384  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50444565 attagacatgcataatccaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttg 50444664  T
Q  385 gtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgg 484  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50444665 gtccaacatagacgttttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgg 50444764  T
Q  485 gactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttatttattatgtgcttgtgagcttgtctatgtggttgaaattata 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50444765 gactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagccatttatttattatgtgcttgtgagcttgtctatgttgttgaaattata 50444864  T
Q  585 gcaaaatgtccttaaatatcaacttcaacagaaaattgttcttcccacatcaaaaattgctatgacacacctggaaattacacatcataaccccaacgac 684  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50444865 gcaaaatgtccttaaatatcaacttcaacagaaaattgttcttcccacttcaaaaattgttatgacacacctggaaattacacatcataaccccaacgac 50444964  T
Q  685 agctaa 690  Q
    ||||||    
T  50444965 agctaa 50444970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 50444283 - 50444422
Alignment:
Q  18 ggagaagttgttaaggaggaagagaagaggtgcattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtgaacggatctgtgtgtaaaa 117  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  50444283 ggagaagttgttaaggaggaagagaagaggtggattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtaaacagatctgtgtgtaaaa 50444382  T
Q  118 ttgtgagaatagatagattaatgggtttggttgggtggag 157  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50444383 ttgtgagaatagatagattaatgggtttggttgggtggag 50444422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 330 - 534
Target Start/End: Complemental strand, 27814497 - 27814292
Alignment:
Q  330 aaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaa-gttaacgatttggatt 427  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||| |||| ||||||||||||||||| ||| | ||||||| ||||||  |  |||||    
T  27814497 aaacggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacatttag-agttaaaagttaaccgtcgggatt 27814399  T
Q  428 tatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatc 527  Q
    |||||| ||| | |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||  |||| | |    
T  27814398 tatttggcaaacagaggaaaaaatgagggaccaaaaggtacgttttattaattataggactaaaatgaaaacttgaaattatttgagggatgattggaac 27814299  T
Q  528 aaataag 534  Q
    |||||||    
T  27814298 aaataag 27814292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 15072693 - 15072906
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac-ga 419  Q
    ||||||||||||  || |||| || ||||||||||  ||||||| ||||| |||||| ||||||||||||||||||| |||  | |||||||||||| ||    
T  15072693 aaaagatcaaacaatttaaattaagaaaattaatagagtctacggtggaccactctttaggttggtccaccatagacatttgag-gttaaagttaacaga 15072791  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 519  Q
      |||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||   |||||    
T  15072792 catggatttatttggcaaacggaggaaaaaataagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggacc 15072891  T
Q  520 attgaatcaaataag 534  Q
    |||||||||||||||    
T  15072892 attgaatcaaataag 15072906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 287 - 537
Target Start/End: Original strand, 35943315 - 35943566
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggtt--aaaatgaacaaaattaataaggtctacgatgga-cactcttaaggtt 383  Q
    ||||| ||| |||||||||| ||||| ||| ||| ||||||||||||||||  ||||| || ||| ||||||||||||| | |||| |||||||||||||    
T  35943315 tagacctgcgtaattcaatggtcatcctttcaaa-aaaagatcaaacggttttaaaataaa-aaatttaataaggtctatggtggatcactcttaaggtt 35943412  T
Q  384 ggtccaccatagacgttttggagttaaagttaacgatttgg--atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattg 481  Q
    |||||||||||||| ||| || |||||| |||||     ||  ||||||||| ||| || |||||||| ||||| ||||||| |||||||||||||||||    
T  35943413 ggtccaccatagacatttagg-gttaaacttaacagccaggggatttatttggcaaacgaaggaaaaagtgagg-accaaaatgtacgttttattaattg 35943510  T
Q  482 tgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtca 537  Q
    |||||| ||||| ||||||||||||||||| || ||||||| ||||||||||||||    
T  35943511 tgggaccaaaataaaaatttgaaattatttaagagaccattaaatcaaataagtca 35943566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 371 - 534
Target Start/End: Original strand, 45584960 - 45585125
Alignment:
Q  371 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    ||||||||| ||||| ||||||||||| |  |||||  ||||| |||||| |  ||||||||||| ||| ||||||||||| ||| ||||||||||||||    
T  45584960 cactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtac 45585059  T
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||| ||||||||||    
T  45585060 gttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggactattggatcaaataag 45585125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 311 - 534
Target Start/End: Original strand, 46111388 - 46111604
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtta 409  Q
    |||||||||| |||| ||||||| ||||| || |||| |||||||||| ||||  |||||| ||| |||| |||| ||||||||||| |||        |    
T  46111388 tcttttaaaaaaaaaaatcaaacagttaagattaacacaattaataagatctatcatggaccacttttaaagttgatccaccataga-gtta-------a 46111479  T
Q  410 aagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattat 509  Q
    ||||||||  |  ||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  46111480 aagttaacagtcgggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaattat 46111579  T
Q  510 ttgagggaccattgaatcaaataag 534  Q
    || ||||||||||||||||||||||    
T  46111580 ttaagggaccattgaatcaaataag 46111604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 400 - 519
Target Start/End: Original strand, 52628855 - 52628974
Alignment:
Q  400 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 499  Q
    ||||| |||||| |||||| ||  |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||     
T  52628855 tttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaattaaaac 52628954  T
Q  500 ttgaaattatttgagggacc 519  Q
    |||||||||||| |||||||    
T  52628955 ttgaaattatttaagggacc 52628974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 322 - 479
Target Start/End: Complemental strand, 46110494 - 46110337
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||| ||||||||||||||  |    
T  46110494 aaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccataga-tatttagagttaaagttaacagt 46110396  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaat 479  Q
       |||||||||  ||| ||||| ||||  |||| |||||||| |||||||||||||||    
T  46110395 cgagatttatttagcaaacggagaaaaacttgagtgaccaaaaagtacgttttattaat 46110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 322 - 534
Target Start/End: Complemental strand, 14471069 - 14470856
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac--- 417  Q
    ||||||||||||||| |||||  | ||||||||| | || || | ||||| ||||||||||||||||||| |||||||||| || |||||| |||||       
T  14471069 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtttatggtggaccactcttaaggttggtccactatagacgtttggg-gttaaacttaacacc 14470971  T
Q  418 gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
    ||   ||||||||||| ||| || |||||||| ||||||||  ||  ||||||||||||||||||||||| |||||||||| ||||||||||||  ||||    
T  14470970 gaa--ggatttatttggcaaacgaaggaaaaagtgagggacttaaccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttagggga 14470873  T
Q  518 ccattgaatcaaataag 534  Q
    |||||| ||||||||||    
T  14470872 ccattggatcaaataag 14470856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 430 - 534
Target Start/End: Original strand, 34351968 - 34352072
Alignment:
Q  430 tttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaa 529  Q
    |||||||| || |||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| || ||||||||| |||||| |||| |||||    
T  34351968 tttgacaaacgtaggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggactattggatcaa 34352067  T
Q  530 ataag 534  Q
    |||||    
T  34352068 ataag 34352072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 325 - 508
Target Start/End: Complemental strand, 16964043 - 16963860
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||| |||| |||||||||||||| |||| ||  ||| ||||||||||||||  |  |    
T  16964043 agatcgaagggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaac-atttagagttaaagttaacagtcag 16963945  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     ||||||||| ||| |||||||||| ||||||||| ||||      |||||||||||||||||| ||||||||||  ||||||||    
T  16963944 catttatttggcaaacggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaatta 16963860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 297 - 534
Target Start/End: Original strand, 14477668 - 14477907
Alignment:
Q  297 taattcaatgatcat-cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccata 394  Q
    |||| |||||||||| |||||||||  | | ||||||||||||||||  | ||||||||| | ||||| | |||||| |||||||| ||| || ||||||    
T  14477668 taatccaatgatcattcttttaaaaagacatatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatctaccata 14477767  T
Q  395 gacgttttggagttaaagttaacgattt--ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaa 492  Q
    ||| ||| | ||||||| ||||| ||    ||||||||||| ||| ||||| ||||| ||||||||  ||| ||||||||||||||||||||||  |||     
T  14477768 gacatttag-agttaaacttaac-atcgaaggatttatttggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaattgtgggatcaaag 14477865  T
Q  493 tgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||| || |||||||||  |||||||||| ||||||||||    
T  14477866 tgaaaacttaaaattatttatgggaccattggatcaaataag 14477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 339 - 508
Target Start/End: Original strand, 49802816 - 49802985
Alignment:
Q  339 aaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaa 437  Q
    |||| |||||||||||| ||||||||||| ||| ||| ||||||||||| |||||||||| ||| | |||| ||||||||  |  ||||||||||| |||    
T  49802816 aaataaacaaaattaatgaggtctacgatagaccacttttaaggttggtacaccatagacatttag-agttgaagttaaccgtcgggatttatttggcaa 49802914  T
Q  438 tcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     ||||| |||| ||||||||| |||| ||   |||||||||||||||||| ||||||||||  ||||||||    
T  49802915 acggagaaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaatta 49802985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 425 - 534
Target Start/End: Complemental strand, 52627625 - 52627515
Alignment:
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt-attaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||| |||| ||| ||||||||||| | | || |||||| ||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  52627625 atttttttggcaaacggaggaaaaattaaaggtccaaaatgtatgtttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattg 52627526  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  52627525 gatcaaataag 52627515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 423 - 508
Target Start/End: Original strand, 44278354 - 44278439
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||| |||||| ||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||    
T  44278354 ggatctatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaatta 44278439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 422 - 534
Target Start/End: Complemental strand, 15071454 - 15071342
Alignment:
Q  422 tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccat 521  Q
    ||||||||||||  || ||||||||||| |||||||||||||  ||||||||||||||| || ||| |||||||||| ||||||||||||  |||||||     
T  15071454 tggatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaa 15071355  T
Q  522 tgaatcaaataag 534  Q
    || || |||||||    
T  15071354 tggattaaataag 15071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 24499660 - 24499771
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    |||||||||||  || ||||||||||| ||||||||||||| ||  ||||||||||||||| ||| |||||||||| ||||||||||||  |||||||      
T  24499660 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaac 24499759  T
Q  523 gaatcaaataag 534  Q
     |||||||||||    
T  24499760 aaatcaaataag 24499771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 534
Target Start/End: Original strand, 41873875 - 41874087
Alignment:
Q  323 aaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacga-t 420  Q
    ||||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||||||||||  ||||  |||||| ||||| |      
T  41873875 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccatagac-atttgtggttaaacttaacaacc 41873973  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
      |||||||||||  || ||||||||||  | | || ||||||| ||| ||||||||||| || ||| || ||||||| | ||||||| |||||||||||    
T  41873974 aaggatttatttggtaaacggaggaaaagctaaagggccaaaagatactttttattaattatgagaccaagatgaaaaatggaaattaattgagggacca 41874073  T
Q  521 ttgaatcaaataag 534  Q
     || ||| ||||||    
T  41874074 atggatctaataag 41874087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 331 - 534
Target Start/End: Complemental strand, 41872780 - 41872576
Alignment:
Q  331 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggattta 429  Q
    ||||||| |||| || ||| ||||||||||||| | || || | ||||||| ||||| |||||||||| ||| || |||||| |||||      ||||||    
T  41872780 aacggtttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacatttgggggttaaacttaacaccaatgattta 41872681  T
Q  430 tttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaa 529  Q
    |||| ||| ||||||||||| |||| |||  ||| ||||||||||||||||||  ||  |||||||||| ||||||||| |  ||||||||||  |||||    
T  41872680 tttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccattagatcaa 41872581  T
Q  530 ataag 534  Q
    |||||    
T  41872580 ataag 41872576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 530
Target Start/End: Complemental strand, 50442734 - 50442628
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| | ||||||||  ||||| | ||||| ||||||||||||||||||| ||| ||||| ||||  | |||||||||||||||| ||||    
T  50442734 gatttatttgacaaacagaggaaaaggtgaggaatcaaaatgtacgttttattaattgtgagaccaaaataaaaacataaaattatttgagggacaattg 50442635  T
Q  524 aatcaaa 530  Q
     ||||||    
T  50442634 gatcaaa 50442628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 325 - 508
Target Start/End: Original strand, 15233949 - 15234131
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||| ||||| |||||||||||||| ||||| ||| |||||| |  |||||| ||| | ||||||||| |||  |  |    
T  15233949 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattatagacattt-gaagttaaagt-aacagtcgg 15234046  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  15234047 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 15234131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 16123398 - 16123287
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| |||| ||||||||||||||| |||| ||   ||||||||||||||| || |||||||||| || |||||||||   ||| || |    
T  16123398 ggatttatttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgtggaaccaaaatgaaaactttaaattatttagaggatcaat 16123299  T
Q  523 gaatcaaataag 534  Q
    ||||||||||||    
T  16123298 gaatcaaataag 16123287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 23091462 - 23091351
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||| ||||| |||| |||||||| ||||||||||||||||||   || ||||||||||| |||||||| ||  ||||||| |    
T  23091462 ggatttatttggcaaacggagaaaaaagtgagtgaccaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaat 23091363  T
Q  523 gaatcaaataag 534  Q
      ||||||||||    
T  23091362 agatcaaataag 23091351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 287 - 508
Target Start/End: Complemental strand, 46467393 - 46467172
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||| | ||||||||||| ||||||||| | | || | ||||||||||| |||| || ||| |||||||  |||||| |||| |||| |||| |||||    
T  46467393 tagacacgtataattcaatggtcatctttttagaaaatatatcaaacggtttaaattaa-aaatttaataacatctacggtggatcacttttaatgttgg 46467295  T
Q  386 tccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgg 484  Q
    |||||||||||| |||  | |||||| ||||| |    ||||||||||||||| |||||| |||  ||||||||| |||  |  ||||||||| || |||    
T  46467294 tccaccatagacatttatg-gttaaacttaacagcgagggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttatgg 46467196  T
Q  485 gactaaaatgaaaatttgaaatta 508  Q
    ||| |||||||||| |||||||||    
T  46467195 gaccaaaatgaaaacttgaaatta 46467172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 425 - 520
Target Start/End: Original strand, 51042350 - 51042444
Alignment:
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||||||||| ||| ||||| |||||| ||||||| |||| ||  ||||||||||||||||||| |||||||||||| ||||||| || ||||||||    
T  51042350 atttatttggcaaacggagaaaaaaa-gagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaattaagggacca 51042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 311 - 508
Target Start/End: Original strand, 16965018 - 16965217
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagt 407  Q
    |||||||||| |||| | ||||||||| |||| || | |||||||| | |||| | ||||| |||||||| |||||||||||||| || |  ||||| ||    
T  16965018 tcttttaaaagaaaaaa-caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggt 16965116  T
Q  408 taaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatt 507  Q
    |||| ||||| ||  | |||||||||| || |||| |||||  | |||||| |||| ||   |||||||||||||||||| |||||||||||  ||||||    
T  16965117 taaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggactaaaacgtcatttttattaattgtgggaccaaaatgaaaataagaaatt 16965216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 417
Target Start/End: Complemental strand, 48527775 - 48527652
Alignment:
Q  293 tgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccacc 391  Q
    |||||||| ||||| ||||| ||||||| |||||||||||| ||| |||| || | |||| ||||| |||| | ||||| |||||||| ||||||| |||    
T  48527775 tgcataatccaatggtcatcatttaaaa-aaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactcttaaagttggtcgacc 48527677  T
Q  392 atagacgttttggagttaaagttaac 417  Q
    |||||| ||| |||||||||||||||    
T  48527676 atagacattt-ggagttaaagttaac 48527652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 287 - 508
Target Start/End: Complemental strand, 15233000 - 15232778
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||||||||||| ||||| |  |||||||||| |||| ||||||||||| | || || | |||||||| | |||| |||||| |||| |||| |||||    
T  15233000 tagacatgcataatccaatggttctcttttaaaa-aaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttgg 15232902  T
Q  386 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    ||||| ||| || |  ||||| |||||| |||||| |   |||||||||| ||| | ||||||||  |||||||| |||| |    ||||||||||| ||    
T  15232901 tccactatatacatcatttgg-gttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatg 15232803  T
Q  484 ggactaaaatgaaaatttgaaatta 508  Q
    |||| ||||||||||  ||||||||    
T  15232802 ggaccaaaatgaaaacatgaaatta 15232778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 50442825 - 50442752
Alignment:
Q  314 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggt 386  Q
    ||||||||||||||||||| ||||||||| |  ||||||||||  ||||||||||||| |||||||| ||||||    
T  50442825 tttaaaacaaaagatcaaatggttaaaattattaaaattaatacagtctacgatggactactcttaaagttggt 50442752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 492
Target Start/End: Original strand, 44999329 - 44999535
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaa-aagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttg 384  Q
    ||||| ||| |||| ||||| ||||||||| ||| || ||||||||| |||| || | || | |||||||||| |||| | || || ||||||| | |||    
T  44999329 tagacttgcgtaatccaatggtcatcttttgaaaaaacaagatcaaatggtttaagttaaaataattaataagatctatggtgaaccactcttacgattg 44999428  T
Q  385 gtccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    ||||||||||||| |||  | |||||||||||| | |  ||||||||||| ||| | ||||||||||||| |||| |||| |    ||||||||||||||    
T  44999429 gtccaccatagacatttaag-gttaaagttaacagctagggatttatttggcaaacagaggaaaaaatga-ggacgaaaacgccaattttattaattgtg 44999526  T
Q  484 ggactaaaa 492  Q
    |||||||||    
T  44999527 ggactaaaa 44999535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 418
Target Start/End: Original strand, 18821632 - 18821738
Alignment:
Q  312 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaa 410  Q
    ||||||||||||||||||||||||||||| |  | |||||||||| | |||  | | || ||||||||||||| |||||||||||||  |||| ||||||    
T  18821632 cttttaaaacaaaagatcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagac-atttgaagttaa 18821730  T
Q  411 agttaacg 418  Q
    || |||||    
T  18821731 agataacg 18821738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 498
Target Start/End: Original strand, 30535573 - 30535749
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaac-ga 419  Q
    ||||||||| | ||||||||| || ||||| ||||||||||| | |||||  ||| ||| ||||||||||||||||| ||| | || |||||||||  ||    
T  30535573 aaaagatcagagggttaaaattaa-aaaataaataaggtctatggtggactatctataatgttggtccaccatagacattt-gaagctaaagttaataga 30535670  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    | |||||||||||||||| |||||  | |  ||||| || |||| ||  |||||||||||| ||| || ||||||||||    
T  30535671 tgtggatttatttgacaaacggagttagatttgaggaactaaaacgttggttttattaattatggaaccaaaatgaaaa 30535749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 508
Target Start/End: Complemental strand, 44276233 - 44276148
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||| ||||||| | ||| ||||| ||| ||| ||||| |||||||||||||||| || ||| |||||||||| | |||||||    
T  44276233 ggatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattatgagaccaaaatgaaaaatggaaatta 44276148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 12666003 - 12665944
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaag 380  Q
    |||||||||||||||| |||| ||||||||||||||| |||| | |||| ||||||||||    
T  12666003 aaaagatcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaag 12665944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 365
Target Start/End: Complemental strand, 38281042 - 38280999
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacg 365  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  38281042 aaaagatcaaacggttaaaataaaaaaaattaataaagtctacg 38280999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 21507277 - 21507229
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac 371  Q
    |||||||||||||| | |||| || |||||||||||||||||||||||||    
T  21507277 aaaagatcaaacggctgaaattaa-aaaattaataaggtctacgatggac 21507229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 411
Target Start/End: Complemental strand, 48492925 - 48492853
Alignment:
Q  338 aaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaa 411  Q
    ||||| ||||||||||||||| |||||| |||||  |  ||| |||||||||||||||||  ||||||||||||    
T  48492925 aaaattaacaaaattaataagatctacggtggaccattataatgttggtccaccatagac-atttggagttaaa 48492853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 32693302 - 32693358
Alignment:
Q  313 ttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgg 369  Q
    |||||||||||||||| ||| | ||||| | || ||| |||||||||||||||||||    
T  32693302 ttttaaaacaaaagataaaatgcttaaatttaagaaatttaataaggtctacgatgg 32693358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 470 - 534
Target Start/End: Original strand, 33369247 - 33369311
Alignment:
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||| |||||| |||||||| | ||||||||| ||  | |||||||| ||||||||||    
T  33369247 ttttattaattatgggaccaaaatgaatacttgaaattaattaggagaccattggatcaaataag 33369311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 441 - 533
Target Start/End: Complemental strand, 35942330 - 35942238
Alignment:
Q  441 gaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 533  Q
    ||||||||| |||||||| || | ||  ||||| ||||||   |||| ||||| |||||||||||||||||   |||||| ||||||||||||    
T  35942330 gaggaaaaagtgagggactaagacgtgtgttttgttaattacaggaccaaaataaaaatttgaaattatttagaggaccaatgaatcaaataa 35942238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 322 - 397
Target Start/End: Original strand, 52078047 - 52078123
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagac 397  Q
    |||| |||||||||||||||| || | |||||||| | |||| | || | |||||||||||||||| ||||||||||    
T  52078047 aaaaaatcaaacggttaaaattaaaataattaataggatctatggtgtatcactcttaaggttggttcaccatagac 52078123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 2e-82; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 285 - 534
Target Start/End: Complemental strand, 18197389 - 18197147
Alignment:
Q  285 attagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttg 384  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||| ||||||       |||||||    
T  18197389 attagacatgtataatccaatggtcatcttttaaaacaaaagatgaagcggttaaaattaacaaaattaataaggtctatgatgga-------aaggttg 18197297  T
Q  385 gtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgg 484  Q
    || ||||||||| ||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18197296 gttcaccatagatgttttggagttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgg 18197197  T
Q  485 gactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||| ||||||||||||||||||||||||||||||  ||| ||||||||||    
T  18197196 gaccaaaatgaaaatttgaaattatttgagggacatttggatcaaataag 18197147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 18197673 - 18197534
Alignment:
Q  18 ggagaagttgttaaggaggaagagaagaggtgcattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtgaacggatctgtgtgtaaaa 117  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| |||||| |    
T  18197673 ggagaagttgttaaggaggaagagaataggtggattattaagagagtatttacaaatgaagattgagttgtaaagttggtgaacgaatctgagtgtaata 18197574  T
Q  118 ttgtgagaatagatagattaatgggtttggttgggtggag 157  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18197573 ttgtgagaatagatagattaatgggtttggttgggtggag 18197534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 34818295 - 34818086
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| |||||||||||| |||||||||||||||||||| ||| || || | ||||||||| || ||||||||| |||   ||||||||||||| ||| |    
T  34818295 agatcgaacggttaaaattaacaaaattaataaggtctatgatagatcatttttaaggttgatcaaccatagacatttaa-agttaaagttaactattgg 34818197  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| |||  |||||||||  ||||||||||||   |||||||||||||||||||||| |||||||||| ||||||||| ||   |||||||||    
T  34818196 gatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggaccattg 34818097  T
Q  524 aatcaaataag 534  Q
    |||||||||||    
T  34818096 aatcaaataag 34818086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 40244395 - 40244187
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||  || | |||||||||||||  |       
T  40244395 agatcaaagagttaaaattaacaaaattaataaggtctacgatggaccacttttaagtttggtccaccatagacactt-gaagttaaagttaactgtcaa 40244297  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
     ||| ||||| ||| ||||||||||  ||||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||| |||||||| ||    
T  40244296 aatt-atttggcaaacggaggaaaatttgagggaccaaaatgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttaagggaccaatg 40244198  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  40244197 gatcaaataag 40244187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 371 - 534
Target Start/End: Original strand, 38242468 - 38242632
Alignment:
Q  371 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 469  Q
    ||||||||||||||||||||||||||| |  || |||||||| |||||  |  ||||||||||| ||| | ||  ||||| |||||||||||||||||||    
T  38242468 cactcttaaggttggtccaccatagacatcatttgagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggaccaaaaggtacg 38242567  T
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||| ||||||||||||||    
T  38242568 ttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggacctttgaatcaaataag 38242632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 38241114 - 38240906
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg 424  Q
    ||||| || ||||||||| ||||||||||||||| ||||||||||||  | || | |||||| |||||||||| ||| ||||||||| |||||     ||    
T  38241114 agatcgaatggttaaaattaacaaaattaataagctctacgatggaccatttttaagttggttcaccatagacattt-ggagttaaacttaacagccggg 38241016  T
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 524  Q
    ||||||||| ||| ||||||||||  ||| ||||  ||| ||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||| ||     
T  38241015 atttatttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgtgggaccaaaataaaaatttgaaattattcaagggaccaatgg 38240916  T
Q  525 atcaaataag 534  Q
    ||||||||||    
T  38240915 atcaaataag 38240906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 53624266 - 53624477
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||||||||||| || ||| || ||||||  ||||  |    
T  53624266 aaaagatcaaaaggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatatacatttggg-gttaaacctaaccgt 53624363  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
     |||||||||||| ||| | ||| ||||| |||| |||||||| ||||||||||||||||||| ||  |||||||||| |||||||||||||||||||||    
T  53624364 ctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaattgtgagatcaaaatgaaaacttgaaattatttgagggacca 53624463  T
Q  521 ttgaatcaaataag 534  Q
    ||| ||||||||||    
T  53624464 ttggatcaaataag 53624477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 427 - 534
Target Start/End: Original strand, 12107992 - 12108099
Alignment:
Q  427 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaat 526  Q
    ||||||| ||| ||||||||||| |||||||||||||  || ||||||||| ||||||||| |||||||||| |||||||||||| |||||| |||||||    
T  12107992 ttatttggcaaacggaggaaaaagtgagggaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggactattgaat 12108091  T
Q  527 caaataag 534  Q
    ||||||||    
T  12108092 caaataag 12108099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 534
Target Start/End: Original strand, 53194769 - 53194986
Alignment:
Q  317 aaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagtta 415  Q
    |||| |||| |||||| ||||||||| || ||||||||| | ||||| | |||||  ||| ||| ||  ||||||||||||| ||||| ||||||| |||    
T  53194769 aaaaaaaaaaatcaaatggttaaaataaa-aaaattaatgaagtctatggtggactatctataatgtgagtccaccatagacattttg-agttaaactta 53194866  T
Q  416 ac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgag 514  Q
    || ||  |||||||||||| |||   ||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||| |||||||||||  ||    
T  53194867 acagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattattcaag 53194966  T
Q  515 ggaccattgaatcaaataag 534  Q
     || |||||||| |||||||    
T  53194967 agatcattgaattaaataag 53194986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 371 - 508
Target Start/End: Complemental strand, 3208648 - 3208510
Alignment:
Q  371 cactcttaaggttggtccaccatag-acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 469  Q
    ||||||||||||||||||||||||  |   ||||| |||||| |||||| |  ||||||||||||||| ||||||||||||| ||||| ||||| |||||    
T  3208648 cactcttaaggttggtccaccataatatcatttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataagggatcaaaacgtacg 3208549  T
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||||| |||||| |||||||||| | |||||||    
T  3208548 ttttattaattatgggaccaaaatgaaaaatggaaatta 3208510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 404 - 520
Target Start/End: Original strand, 50810819 - 50810936
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50810819 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50810918  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| ||||||||    
T  50810919 aaattatttaagggacca 50810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 404 - 520
Target Start/End: Complemental strand, 50865045 - 50864928
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50865045 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50864946  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| ||||||||    
T  50864945 aaattatttaagggacca 50864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 325 - 508
Target Start/End: Complemental strand, 41263847 - 41263664
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||  || ||| ||| ||||||||| |||||||||||  ||| | |||||||||||||  || |    
T  41263847 agatcgaatggttaaaattaacaaaattaataaggtctagaatagaccacttttaaggttgatccaccatagatatttag-agttaaagttaacacttgg 41263749  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||| ||||||| ||||| |||| |||| ||||||||| |    ||||| ||| |||||||| ||||||||||| ||||||||    
T  41263748 gatttaattgacaaacggagaaaaagatgacggaccaaaatgccatttttaataaatgtgggaccaaaatgaaaatatgaaatta 41263664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 321 - 498
Target Start/End: Complemental strand, 10731098 - 10730921
Alignment:
Q  321 caaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacga 419  Q
    ||||||||| || | ||||||| ||||||||||||||||| || ||| ||| ||| ||||||||||| |||||||||| ||| | |||||||||||||      
T  10731098 caaaagatcgaatgattaaaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacattt-gaagttaaagttaacag 10731000  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    |  ||||||||||| ||| ||||| ||||| ||| ||||||||| |    ||||||||||| |||||| ||||||||||    
T  10730999 tcgggatttatttggcaaacggagaaaaaagtgaaggaccaaaatgccatttttattaattatgggaccaaaatgaaaa 10730921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 424 - 534
Target Start/End: Complemental strand, 37735416 - 37735306
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| || || |||||||||||||| ||||  ||||||||||||||| |||||| |||||||||| || ||||||||| | |||||| ||    
T  37735416 gatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaatg 37735317  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  37735316 gatcaaataag 37735306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 325 - 508
Target Start/End: Complemental strand, 53420527 - 53420342
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaac-gattt 422  Q
    ||||||||| ||| |||| || ||  ||||||||||||| | |||| |||| |||| ||||||||||||||||| |||  | |||||| ||||  || |     
T  53420527 agatcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacatttgtg-gttaaacttaatagacta 53420429  T
Q  423 gg-atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    || |||||||||| || ||||| ||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||||    
T  53420428 gggatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaatatgaaatta 53420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 469 - 534
Target Start/End: Original strand, 3209982 - 3210047
Alignment:
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  3209982 gttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggaccattgaatcaaataag 3210047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 520
Target Start/End: Complemental strand, 50809552 - 50809435
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||||||||||| ||  |||| |||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50809552 gagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50809453  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| ||||||||    
T  50809452 aaattatttaagggacca 50809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 520
Target Start/End: Original strand, 50866310 - 50866427
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||||||||||| ||  |||| |||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  50866310 gagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 50866409  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| ||||||||    
T  50866410 aaattatttaagggacca 50866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 426 - 534
Target Start/End: Original strand, 37736089 - 37736197
Alignment:
Q  426 tttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaa 525  Q
    |||||||| ||| ||||| ||||| |||||||| |||| ||||||||||||||||||| ||| ||||||||||  ||||||||||| |||||| | ||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaattatttaagggactaatgaa 37736188  T
Q  526 tcaaataag 534  Q
    ||| |||||    
T  37736189 tcacataag 37736197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 53421766 - 53421877
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| | ||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||  || || |||    
T  53421766 ggatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaacgtaaaattaattagggaacaatt 53421865  T
Q  523 gaatcaaataag 534  Q
    ||||||||||||    
T  53421866 gaatcaaataag 53421877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 335 - 508
Target Start/End: Complemental strand, 27838118 - 27837946
Alignment:
Q  335 gttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttg 433  Q
    |||||||| ||||||||||||||||||||||||||| |||| ||||  |||||| |||||||||  |||| |||| ||||||||  |  |||||||||||    
T  27838118 gttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtctaccatagac-atttgaagtt-aagttaacagtcaggatttatttg 27838021  T
Q  434 acaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     ||| ||||||||||  |||||||| |||| |     ||||||||||||||||| ||||||||||  ||||||||    
T  27838020 gcaaacggaggaaaaggtgagggactaaaacgccatatttattaattgtgggaccaaaatgaaaacatgaaatta 27837946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 381 - 536
Target Start/End: Complemental strand, 18442401 - 18442250
Alignment:
Q  381 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 480  Q
    ||||||||||||||||| ||| || |||||| ||||| |  || ||||||||| |||   ||||||||||||| |||| |||| ||  ||||||||||||    
T  18442401 gttggtccaccatagacatttggg-gttaaacttaacaacatgaatttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaatt 18442306  T
Q  481 gtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtc 536  Q
    ||||||| |||||||||| ||||||||||||   |||||| || ||||||| ||||    
T  18442305 gtgggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaatcagtc 18442250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 533
Target Start/End: Original strand, 18458663 - 18458772
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||||||||| |||||||| |||| | | ||||||||||||||||||| ||||| |||| ||||||||||||  ||||| | ||    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatg 18458762  T
Q  524 aatcaaataa 533  Q
     |||||||||    
T  18458763 gatcaaataa 18458772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 381 - 536
Target Start/End: Complemental strand, 19487475 - 19487324
Alignment:
Q  381 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 480  Q
    ||||||||||||||||| ||| || |||||| ||||| |  || ||||||||| |||   ||||||||||||| |||| |||| ||  ||||||||||||    
T  19487475 gttggtccaccatagacatttggg-gttaaacttaacaacatgaatttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaatt 19487380  T
Q  481 gtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtc 536  Q
    ||||||| |||||||||| ||||||||||||   |||||| || ||||||| ||||    
T  19487379 gtgggaccaaaatgaaaacttgaaattatttagaggaccaatggatcaaatcagtc 19487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 325 - 508
Target Start/End: Original strand, 35372066 - 35372248
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| |||| ||||  |||||||| |||||||  |||| |||| ||||||||  |  |    
T  35372066 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtccaacatagac-atttgaagtt-aagttaacagtaag 35372163  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| ||| | ||||||||  |||||||| |||| |    |||||||||||||| ||| ||||||||||  ||||||||    
T  35372164 gatttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaatta 35372248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 533
Target Start/End: Complemental strand, 41544775 - 41544663
Alignment:
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||||||||||||| ||| | ||||||||| ||||||||  ||| ||||||| |||||||| | |||| |||||||||| |||||||||||| | ||||||    
T  41544775 ttggatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggacca 41544676  T
Q  521 ttgaatcaaataa 533  Q
     |||||| |||||    
T  41544675 atgaatctaataa 41544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 511
Target Start/End: Complemental strand, 42685114 - 42684899
Alignment:
Q  297 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatag 395  Q
    |||||||||| ||||||||| ||| || ||||||||||||| |||| || ||| |||||||||| || | |||| |||||||||| ||||| ||||||||    
T  42685114 taattcaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatag 42685015  T
Q  396 acgttttggagttaaagttaac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatg 494  Q
    ||  ||||| |||||| ||||| |    |||||||||||  || |  || |||||||||||||| |||| ||  |||||||| ||| ||| || ||||||    
T  42685014 ac-atttggggttaaacttaacagtcaaggatttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatg 42684916  T
Q  495 aaaatttgaaattattt 511  Q
    |||| || |||||||||    
T  42684915 aaaacttaaaattattt 42684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 36176512 - 36176623
Alignment:
Q  424 gatttatttgacaatcggaggaaaa-aatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    |||||||||| ||| | |||||||| |||||||||||||||  ||| |||||||||||||||||| ||||||||||  |||||||| |   |||||||||    
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggaccatt 36176611  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  36176612 ggatcaaataag 36176623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 40364430 - 40364319
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||| ||||||||||||||  ||| |||| ||||||||||| | |||| |||||||||| ||||||||||||  || ||||||    
T  40364430 ggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaattttaggaccaaaatgaaaacttgaaattatttagggaaccatt 40364331  T
Q  523 gaatcaaataag 534  Q
      ||||||||||    
T  40364330 agatcaaataag 40364319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 424 - 533
Target Start/End: Original strand, 23443463 - 23443572
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| | || ||||| |||| ||||  |||||||||||||||||||| |||||| |||||||||| || |||||| || ||||| |||||    
T  23443463 gatttatttggcaaacagaagaaaagatgaaggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaagggatcattg 23443562  T
Q  524 aatcaaataa 533  Q
     |||||||||    
T  23443563 gatcaaataa 23443572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 325 - 394
Target Start/End: Original strand, 3209873 - 3209943
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccata 394  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| | | |||||||||||||||||||    
T  3209873 agatcaaatggttaaaattaacaaaattaataaggtttacgatggactatttttaaggttggtccaccata 3209943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 444 - 534
Target Start/End: Original strand, 34819310 - 34819400
Alignment:
Q  444 gaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||| ||| ||||  ||| |||||||||||||||||| |||  |||||||||| ||||||||||||||||||| | || ||||||||||    
T  34819310 gaaaaagtgaaggacttaaacgtacgttttattaattgtaggatcaaaatgaaaacttgaaattatttgagggactaatggatcaaataag 34819400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 336 - 509
Target Start/End: Original strand, 40745384 - 40745557
Alignment:
Q  336 ttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttga 434  Q
    ||||||| ||||||||||||||||||||||||| | |||| ||||||||| | || |||| ||  |||||| |||||||||||| |   |||||||||      
T  40745384 ttaaaattaacaaaattaataaggtctacgatgaaccacttttaaggttgatacatcataaac-atttggaattaaagttaacggtcaagatttattttg 40745482  T
Q  435 caatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattat 509  Q
    ||| |  |||||||  ||||||| ||||| | | ||||||| ||||||| ||| |||||||||| || |||||||    
T  40745483 caaacaaaggaaaatctgagggatcaaaacgaaagttttatcaattgtgagaccaaaatgaaaacttaaaattat 40745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 534
Target Start/End: Complemental strand, 53187692 - 53187559
Alignment:
Q  400 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 499  Q
    ||||| |||||| |||||| |  ||||||||||| ||| |||| |||||| ||||||||||||   ||| |||||||||||||  ||  ||||||||||     
T  53187692 tttggggttaaacttaacggtagggatttatttggcaaacggaagaaaaagtgagggaccaaaca-tacattttattaattgtaagatcaaaatgaaaac 53187594  T
Q  500 ttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||  |||||||||  ||||||||||    
T  53187593 ttgaaattatttaggggaccattcgatcaaataag 53187559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 325 - 508
Target Start/End: Original strand, 26887462 - 26887645
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || |||| |||| || ||||||||| ||||||||||| || |||| ||||||||||| |||||||||   |||| |||||||||||||  |  |    
T  26887462 agatcgaatggttgaaataaataaaattaatgaggtctacgatagaccacttttaaggttggtacaccataga-tatttgaagttaaagttaaccgtcag 26887560  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     |||||||||  || | |||||||| ||||||||| |||  |    |||||||||||||||||| ||||||||||  ||||||||    
T  26887561 aatttatttgggaaacagaggaaaagatgagggactaaattgccatttttattaattgtgggacaaaaatgaaaacatgaaatta 26887645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 371 - 496
Target Start/End: Complemental strand, 53622827 - 53622700
Alignment:
Q  371 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    ||||||||||||||||||||||||||| |  ||||| |||||| |||||  || ||||||| ||| ||| ||||||||||  | ||||| |||||  ||     
T  53622827 cactcttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaatatat 53622728  T
Q  469 gttttattaattgtgggactaaaatgaa 496  Q
     |||||||||||||| ||| ||||||||    
T  53622727 tttttattaattgtgcgaccaaaatgaa 53622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 471 - 534
Target Start/End: Complemental strand, 12105353 - 12105290
Alignment:
Q  471 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||||| | || ||||||| |||||||||||||||| |||||||||| |||||||    
T  12105353 tttattaattgtggggccaatatgaaaacttgaaattatttgaggaaccattgaattaaataag 12105290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 12106685 - 12106629
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaat 479  Q
    |||||||||||| || ||||| ||||| ||||||||||||| |||||||||||||||    
T  12106685 ggatttatttgataaacggagaaaaaagtgagggaccaaaatgtacgttttattaat 12106629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 347 - 498
Target Start/End: Complemental strand, 53613058 - 53612907
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 445  Q
    |||||||||||||||||| ||| || ||| |||| |||||| || ||||||| ||| | |||||||||||||| |  ||||||||||| ||| | |||||    
T  53613058 aaaattaataaggtctacaatgaaccacttttaaagttggttcatcatagacattt-gaagttaaagttaacggtcgggatttatttggcaaacagagga 53612960  T
Q  446 aaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    |||  |||||||  |||| |    ||||||||||| |||||| ||||||||||    
T  53612959 aaatgtgagggaataaaacgccatttttattaattatgggaccaaaatgaaaa 53612907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 7270546 - 7270467
Alignment:
Q  312 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccac 390  Q
    |||||||||||||||||||||| |||||| | || ||| |||||||| |||| | | || ||||||||||||||||||||    
T  7270546 cttttaaaacaaaagatcaaacagttaaagtcaaaaaagttaataagatctatggtagaccactcttaaggttggtccac 7270467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 417
Target Start/End: Original strand, 21074148 - 21074279
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttgg 385  Q
    ||||||||| | |||||||| ||||||||   || |||| |||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| |||||    
T  21074148 tagacatgcgtgattcaatggtcatctttcttaaaaaaatatcaaagggttaaaattgaaaaaattaataaggtctatggtggactatctataatgttgg 21074247  T
Q  386 tccaccatagacgttttggagttaaagttaac 417  Q
    ||||||||| || ||| || |||||| |||||    
T  21074248 tccaccatatacatttgggggttaaacttaac 21074279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 511
Target Start/End: Original strand, 8796364 - 8796406
Alignment:
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  8796364 gttttattaattgtgagactaaaataaaaatttgaaattattt 8796406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 36175374 - 36175317
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 480  Q
    ||||||||||| ||| ||||| ||||||||||| ||||||| |||||||| |||||||    
T  36175374 ggatttatttggcaaacggagaaaaaaatgaggcaccaaaacgtacgtttcattaatt 36175317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 508
Target Start/End: Original strand, 3455577 - 3455715
Alignment:
Q  371 cactcttaaggttggtccaccatagacgtttt--ggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    |||||||||||||||||||||||| || ||||  || ||||||||||||  |  |||||||||||||   |||||  ||| |||| |||||||||  |      
T  3455577 cactcttaaggttggtccaccata-acattttggggggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaaggaccaaaacatga 3455675  T
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||| || || ||| |||||||||| |||||||||    
T  3455676 gttttattagttatgagaccaaaatgaaaacttgaaatta 3455715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 508
Target Start/End: Complemental strand, 24403452 - 24403265
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||| ||| |||||||||  | |||||||||||||| || | |||||  ||| ||| ||| || |||||||||| ||| || |||||||||||| |     
T  24403452 aaaagattaaatggttaaaattgaaaaaattaataaggtttatggtggactatctataatgttagttcaccatagacatttagg-gttaaagttaacaaa 24403354  T
Q  421 t-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
      |||||||| ||||||| ||||||  ||  |||||||||||||  ||  ||||||||||| || ||| | |||||||| |||||||||    
T  24403353 catggatttacttgacaaacggaggtgaacttgagggaccaaaacataaattttattaattatgagaccataatgaaaacttgaaatta 24403265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 40892379 - 40892319
Alignment:
Q  312 cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca 372  Q
    ||||||||| | |||||||||| |||||||| || ||| |||||||| |||||||||||||    
T  40892379 cttttaaaatacaagatcaaacagttaaaattaaaaaatttaataagatctacgatggaca 40892319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 498
Target Start/End: Original strand, 53614225 - 53614353
Alignment:
Q  371 cactcttaaggttggtccaccatagacgtt--ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    ||||||||||| || |||||||||||| ||  |||| |||||| ||||||  | ||||||||||| |||   ||||||||  |||||||| |||| |       
T  53614225 cactcttaaggatgatccaccatagacattatttggggttaaacttaacgcct-ggatttatttggcaaatagaggaaaatgtgagggactaaaacgcca 53614323  T
Q  469 gttttattaattgtgggactaaaatgaaaa 498  Q
    ||||||||||||||||||| ||||| ||||    
T  53614324 gttttattaattgtgggaccaaaataaaaa 53614353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 526
Target Start/End: Original strand, 10301882 - 10301926
Alignment:
Q  482 tgggactaaaatgaaaatttgaaattatttgagggaccattgaat 526  Q
    |||||| |||||||||| | ||||||| |||||||||||||||||    
T  10301882 tgggaccaaaatgaaaaatggaaattagttgagggaccattgaat 10301926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 311 - 394
Target Start/End: Complemental strand, 35371132 - 35371048
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccata 394  Q
    |||||| ||| |||| ||||||  |||||||| || | |||||||| | |||| | ||||| |||||||||||||||||||||||    
T  35371132 tctttttaaaaaaaaaatcaaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccata 35371048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 325089 - 325301
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| | |||||||||||||  |    
T  325089 aaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacatttag-agttaaagttaacagt 325187  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
      ||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  325188 cgggatttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacca 325287  T
Q  521 ttgaatcaaataag 534  Q
    ||  ||||||||||    
T  325288 ttagatcaaataag 325301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 306 - 536
Target Start/End: Original strand, 27705202 - 27705434
Alignment:
Q  306 gatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--ttt 402  Q
    ||||||||||||| | |||| ||||||||||| |||| || || ||||||| | |||| | ||||| ||| |||||||||||||||||||||| |  |||    
T  27705202 gatcatcttttaataaaaaatatcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacatcattt 27705301  T
Q  403 ggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||| |||||||||||  | || ||||||||| |||  |||||||||  ||||||||||||| ||||||||||||||||||  ||| |||||||||| |||    
T  27705302 gga-ttaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgagggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaacttg 27705400  T
Q  503 aaattatttgagggaccattgaatcaaataagtc 536  Q
    ||||||||||||| ||||||||||||||||||||    
T  27705401 aaattatttgaggaaccattgaatcaaataagtc 27705434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 371 - 534
Target Start/End: Complemental strand, 22047897 - 22047732
Alignment:
Q  371 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    |||||||||||||| |||||||||||| |  ||| |||||||| |||||     ||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  22047897 cactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgagggaccaaaacgtac 22047798  T
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||||||||| |||||||||| ||||||||| || ||||||||||| ||||||||||    
T  22047797 gttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggaccattggatcaaataag 22047732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 327 - 534
Target Start/End: Original strand, 30859078 - 30859288
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttg 423  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||| |||||||||||||||| |  ||||| |||||| |||||| |       
T  30859078 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaa 30859177  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    || ||||||| ||| | ||||||||  ||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||    
T  30859178 gacttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggactaatg 30859277  T
Q  524 aatcaaataag 534  Q
    |||||||||||    
T  30859278 aatcaaataag 30859288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 322 - 534
Target Start/End: Complemental strand, 39604068 - 39603853
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | |||| |||| |||||||||||| ||||||||| |  ||||| |||||| |||||     
T  39604068 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaaca 39603969  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
     |   |||||||||| ||| ||||||||||  ||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||||     
T  39603968 gtcatgatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggat 39603869  T
Q  519 cattgaatcaaataag 534  Q
    || || ||||||||||    
T  39603868 caatggatcaaataag 39603853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 325 - 533
Target Start/End: Original strand, 39605375 - 39605584
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actctt-aaggttggtccaccatagacgttttggagttaaagttaacgattt 422  Q
    ||||| ||||| |||||| || |||||||||||||||||| || ||| ||| || ||| ||||||||||||| || |||   |||| ||||||||  |      
T  39605375 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccactttttaagattggtccaccatatacatttaa-agttgaagttaaccgtca 39605473  T
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||  ||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||| ||   ||||||||    
T  39605474 ggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggaccatt 39605573  T
Q  523 gaatcaaataa 533  Q
    |||||||||||    
T  39605574 gaatcaaataa 39605584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 347 - 534
Target Start/End: Complemental strand, 30857987 - 30857800
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 445  Q
    ||||||||||||||||  ||| ||| ||| |||||||||||||| ||||||| |||   |||||||||||||  ||  ||||||||||||||  ||||||    
T  30857987 aaaattaataaggtctctgatagaccacttttaaggttggtccatcatagacatttaa-agttaaagttaactgttaagatttatttgacaaaaggagga 30857889  T
Q  446 aaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||  ||| |||||||||  |||||||||||||||||||||| |||||||||| || |||||| ||   ||||||||||||||||||||    
T  30857888 aaatctgaaggaccaaaacatacgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccattgaatcaaataag 30857800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 287 - 520
Target Start/End: Original strand, 22308667 - 22308901
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||||||||||| ||||| ||||||||| ||| || |||||||| |||| | || || ||| ||||||| ||||| | ||||| ||||||||||| ||    
T  22308667 tagacatgcataatccaatggtcatctttttaaaaaacagatcaaatggtttacattaaaaaatttaataatgtctatggtggaccactcttaaggtagg 22308766  T
Q  386 tccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgg 484  Q
    |||||||||||| ||| || |||||| ||||| |   |||||||||||| ||| ||||| ||||  |||||||| |||| |   |||||||||||| |||    
T  22308767 tccaccatagacatttggg-gttaaacttaacaaccatggatttatttggcaaacggagcaaaatgtgagggactaaaacgcctgttttattaattatgg 22308865  T
Q  485 gactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||| ||||||||||  |||||||||||  |||||||    
T  22308866 gaccaaaatgaaaacatgaaattatttaggggacca 22308901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 344 - 508
Target Start/End: Original strand, 30912088 - 30912252
Alignment:
Q  344 aacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcgga 442  Q
    |||||||||||||||||||| |||| || ||| |||||||||||||||||||||  ||| |||||||||||||||  || ||||||||||| ||| ||||    
T  30912088 aacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatattt-ggagttaaagttaacacttgggatttatttggcaaacgga 30912186  T
Q  443 ggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    | ||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  30912187 gaaaaaggtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 30912252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 511
Target Start/End: Original strand, 22049141 - 22049229
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    ||||||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||    
T  22049141 ggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattattt 22049229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 427 - 534
Target Start/End: Complemental strand, 15941380 - 15941274
Alignment:
Q  427 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaat 526  Q
    ||||||||||| |||| |||||| |||||||||||| ||||||||||||||||| ||| |  |||||||||| || |||||| |||| ||||| ||| ||    
T  15941380 ttatttgacaaacggaagaaaaagtgagggaccaaatggtacgttttattaattatggaatcaaaatgaaaacttaaaatta-ttgaaggaccgttggat 15941282  T
Q  527 caaataag 534  Q
    ||||||||    
T  15941281 caaataag 15941274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 293 - 417
Target Start/End: Complemental strand, 1102859 - 1102736
Alignment:
Q  293 tgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccacc 391  Q
    |||||||| || || ||||| ||||||| |||||||||||||||| |||| || | |||||||||| |||| | ||||| |||||||||||||||| |||    
T  1102859 tgcataatccactggtcatcatttaaaa-aaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctacc 1102761  T
Q  392 atagacgttttggagttaaagttaac 417  Q
    ||||||  ||||| ||||||||||||    
T  1102760 atagac-atttggggttaaagttaac 1102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 287 - 508
Target Start/End: Complemental strand, 30910990 - 30910767
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||| |||||||||| |  |||||||||  ||||  |||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||    
T  30910990 tagacatgcctaattcaatggttctcttttaaagaaaaac-tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttgg 30910892  T
Q  386 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    ||||||| |||| |  ||||| ||||||||||||  |   ||||||||||  || | ||||||||  |||||||| |||| |    ||||||||||||||    
T  30910891 tccaccaaagacatcatttggtgttaaagttaacagtcgagatttatttggtaaacagaggaaaatgtgagggactaaaacgccatttttattaattgtg 30910792  T
Q  484 ggactaaaatgaaaatttgaaatta 508  Q
    |||| ||||||||||  ||||||||    
T  30910791 ggaccaaaatgaaaacatgaaatta 30910767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 322 - 520
Target Start/End: Complemental strand, 32758039 - 32757839
Alignment:
Q  322 aaaagatcaaacggttaaaat-gaacaaaattaataaggtctacgatggacactctta-aggttggtccaccatagacgttttggagttaaagttaacga 419  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||| | |||||  |||   | ||||||||||||||||| ||| || ||||||||||||      
T  32758039 aaaagatcaaagggttaaaattgaaaaaaattaataaggtctatggtggactatctaccatgttggtccaccatagacatttggg-gttaaagttaacac 32757941  T
Q  420 tt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
       ||||||||||||||   ||||||  ||  |||||||||||||  |  ||||||||| || |||||| |||||||||| | |||||||||||||||||    
T  32757940 ccatggatttatttgaccggcggaggtgaacttgagggaccaaaacatgagttttattatttatgggaccaaaatgaaaactggaaattatttgagggac 32757841  T
Q  519 ca 520  Q
    ||    
T  32757840 ca 32757839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 322 - 463
Target Start/End: Complemental strand, 324252 - 324109
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagtt-aaagttaacga 419  Q
    |||| ||||||||||||| || |||  ||||||||||||||| |||||| |||| |||| |||||||||||||||||  ||| ||||| |||||||||      
T  324252 aaaaaatcaaacggttaagattaacgcaattaataaggtctatgatggaccactattaaagttggtccaccatagac-atttagagttaaaagttaacag 324154  T
Q  420 tttggatttatttgacaatcgg-aggaaaaaatgagggaccaaaa 463  Q
    || | |||||||||| || ||| |||||||||||| |||||||||    
T  324153 ttggaatttatttgagaaacggaaggaaaaaatgaaggaccaaaa 324109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 374 - 520
Target Start/End: Complemental strand, 8521414 - 8521269
Alignment:
Q  374 tcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 473  Q
    ||||||||||||||||||||| || ||| || ||||||||||||  |  |||||||||||||   |||||  |||  |||||||||||||  |  |||||    
T  8521414 tcttaaggttggtccaccatacacatttggg-gttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggaccaaaacatgagtttt 8521316  T
Q  474 attaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||| || |||||| |||||||||| ||||||||| || ||||||||    
T  8521315 attagttatgggaccaaaatgaaaacttgaaattaattaagggacca 8521269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 520
Target Start/End: Original strand, 1010318 - 1010466
Alignment:
Q  371 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 470  Q
    |||||||||||||||||||||||| || ||| || ||||||||||||  |  |||||||||||||   |||||  |||  |||||||||||||  |  ||    
T  1010318 cactcttaaggttggtccaccatacacatttggg-gttaaagttaaccgtcgggatttatttgactgacggagacaaacgtgagggaccaaaacatgagt 1010416  T
Q  471 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||||||| || |||||| ||||| |||| ||||||||| || ||||||||    
T  1010417 tttattagttatgggaccaaaataaaaacttgaaattaattaagggacca 1010466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 453 - 522
Target Start/End: Original strand, 24509071 - 24509140
Alignment:
Q  453 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||| | ||||| || ||||||||||    
T  24509071 agggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggaccatt 24509140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 453 - 520
Target Start/End: Complemental strand, 24503265 - 24503198
Alignment:
Q  453 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||| | ||||| || ||||||||    
T  24503265 agggaccaaaaggtacgttttattacttatgggaccaaaatgaaaattggtaattaattaagggacca 24503198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 475 - 534
Target Start/End: Original strand, 41798004 - 41798063
Alignment:
Q  475 ttaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||| || ||||||||||    
T  41798004 ttaattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataag 41798063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 539
Target Start/End: Complemental strand, 15548348 - 15548235
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||| |||||||| |||  ||   ||||||||||| |||||  ||||  |||||||||||||||||  ||||||| |    
T  15548348 ggatttatttggcaaacggaggaaaaa-tgagggactaaatagtgaattttattaattatgggataaaaa--aaaatttgaaattatttaggggaccaat 15548252  T
Q  523 gaatcaaataagtcatt 539  Q
    | |||||||||||||||    
T  15548251 ggatcaaataagtcatt 15548235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 508
Target Start/End: Original strand, 33173862 - 33174050
Alignment:
Q  322 aaaagatcaaacggttaaaatg-aacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac-g 418  Q
    |||||||||||||||||||||  || ||||||||| | ||||| | | ||| ||||||||||||||||||||||||||  ||||| |||||| ||||| |    
T  33173862 aaaagatcaaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccatagac-atttggggttaaacttaacag 33173960  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
        ||||||||||| ||| | ||||||||  |||||||| |||| |    ||||||||| |||||||  ||||||||||  ||||||||    
T  33173961 ccaaggatttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaatta 33174050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 34894260 - 34894149
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    |||||| |||| ||| |||||  |||| | |||||||||||||||| |||||||| ||  ||||| |||||||||| | ||||||| || |||||||| |    
T  34894260 ggatttttttggcaaacggagacaaaactaagggaccaaaaggtactttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaat 34894161  T
Q  523 gaatcaaataag 534  Q
    | ||| ||||||    
T  34894160 ggatctaataag 34894149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 11262321 - 11262279
Alignment:
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  11262321 gttttattaattgtgggactaaaatgaaaacttaaaattattt 11262279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 508
Target Start/End: Complemental strand, 9169651 - 9169612
Alignment:
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  9169651 gttttattaattatgggactaaaatgaaaacttgaaatta 9169612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 508
Target Start/End: Complemental strand, 20538117 - 20538079
Alignment:
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  20538117 ttttattaattatgggaccaaaatgaaaatttgaaatta 20538079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 533
Target Start/End: Complemental strand, 324117 - 324068
Alignment:
Q  484 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 533  Q
    |||| |||||||||| ||||||||||||||| |||||| |||| ||||||    
T  324117 ggaccaaaatgaaaaattgaaattatttgagtgaccatcgaatgaaataa 324068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 20539249 - 20539290
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtcta 363  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  20539249 aaaagatcaaacggtttaaattaaaaaaattaataaggtcta 20539290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 520
Target Start/End: Original strand, 32759081 - 32759150
Alignment:
Q  451 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||||||||||||  |  ||||||||| || ||| ||||||||||||| |  ||||||||||||||||||    
T  32759081 tgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggacca 32759150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 534
Target Start/End: Original strand, 34898986 - 34899067
Alignment:
Q  453 agggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||| |||| |||||||| || |||||| |||||||||| |  |||||| || |||||||| || ||| ||||||    
T  34898986 agggaccaaaatgtactttttattacttatgggaccaaaatgaaaaatgaaaattaattaagggaccaatggatctaataag 34899067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 371 - 508
Target Start/End: Original strand, 8523698 - 8523836
Alignment:
Q  371 cactcttaaggttggtccaccatagacgtttt--ggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    |||||| ||||||||||||||||| || ||||  || ||||||||||||  |  |||||||||||||   |||||  ||| |||| ||| |||||  |      
T  8523698 cactctgaaggttggtccaccata-acattttggggggttaaagttaactgtcaggatttatttgactgacggagacaaacatgaaggatcaaaacatga 8523796  T
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||| || |||||| |||||||||| |||||||||    
T  8523797 gttttattagttatgggaccaaaatgaaaacttgaaatta 8523836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 287 - 534
Target Start/End: Original strand, 125098 - 125349
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaatt-aataaggtctacgatggac-actcttaaggttg 384  Q
    |||||| ||||||| ||||| ||||||||| ||| ||  ||||||| |||| |||| || |||||| ||||||||||| | ||||| ||| |||||||||    
T  125098 tagacacgcataatccaatggtcatctttttaaaaaactgatcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttg 125197  T
Q  385 gtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgt 482  Q
    ||||| |||| || |  ||||| |||||| |||||  || ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  125198 gtccatcatatacatcatttggggttaaacttaaccgttaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgt 125297  T
Q  483 gggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  125298 gggaccaaaatgaaaatttgaaattatttgagggaccattggatcaaataag 125349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 287 - 534
Target Start/End: Complemental strand, 124215 - 123969
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||||||||||| | ||| | ||||||| ||| || |||||||||| || |||| |||||  |||||| | |||| | ||||| ||||||||||||||    
T  124215 tagacatgcataatcctatggttatctttttaaaaaatagatcaaacgatttaaattaacaat-ttaatacgatctatggtggaccactcttaaggttgg 124117  T
Q  386 tccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtggg 485  Q
    |||||||||||  ||| || |||||| |||||  |  ||||||||||| ||| | ||||||||| ||||||||||||| |||||||||||||||||||||    
T  124116 tccaccatagatatttggg-gttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttttattaattgtggg 124018  T
Q  486 actaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    || |||||||||| |||||||||||||| ||||||||| ||||||||||    
T  124017 accaaaatgaaaacttgaaattatttgaaggaccattggatcaaataag 123969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 5e-58; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 322 - 534
Target Start/End: Complemental strand, 1587395 - 1587182
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaa-gttaacga 419  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||||| |||| |||| ||||||| || |||||| ||| | ||||||| |||||| |    
T  1587395 aaaagatcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacatttag-agttaaaagttaacca 1587297  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 519  Q
    |  ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1587296 tcgggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttgagggacc 1587197  T
Q  520 attgaatcaaataag 534  Q
     ||| ||||||||||    
T  1587196 gttggatcaaataag 1587182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 287 - 534
Target Start/End: Complemental strand, 1794661 - 1794411
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||| ||||||||||||| ||||||||| ||| ||  |||||||||||| |||| || ||| ||||||||||||| | ||||| ||||||||||||||    
T  1794661 tagacacgcataattcaatggtcatctttttaaaaaattgatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttgg 1794562  T
Q  386 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    ||||||||| || |  |||||  ||||| |||||  || ||||||||||||||| | ||||||||| ||||||| |||||||||  ||||||||||||||    
T  1794561 tccaccatatacatcatttgggattaaacttaaccgttaggatttatttgacaaacagaggaaaaagtgagggatcaaaaggtatattttattaattgtg 1794462  T
Q  484 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
     ||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  1794461 agatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataag 1794411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 322 - 534
Target Start/End: Complemental strand, 6348367 - 6348155
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| ||||||||| |  || |||||||||||||||| ||||| |||||||||||||||||||||||||| |||  | |||||| ||||| ||    
T  6348367 aaaagatcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccatagacatttgag-gttaaacttaaccat 6348269  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
      | ||||||||||||| | ||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  6348268 cagaatttatttgacaaacagaggaaaaagtgaggaaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacca 6348169  T
Q  521 ttgaatcaaataag 534  Q
    ||  ||||||||||    
T  6348168 tttgatcaaataag 6348155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 322 - 534
Target Start/End: Complemental strand, 1829966 - 1829753
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaa-gttaacga 419  Q
    |||| |||||| |||||| || || ||||||||||||||||||||||||| ||| |||| |||||||||| |||||| ||| | ||||||| ||||||      
T  1829966 aaaaaatcaaatggttaagattaataaaattaataaggtctacgatggaccacttttaaagttggtccacgatagacatttag-agttaaaagttaacag 1829868  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 519  Q
    |  | ||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  1829867 tcggaatttatttgacaaacgtaggaaaaagtgagggactaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacc 1829768  T
Q  520 attgaatcaaataag 534  Q
     ||| ||||||||||    
T  1829767 gttggatcaaataag 1829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 347 - 534
Target Start/End: Original strand, 393566 - 393754
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg-atttatttgacaatcggagg 444  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||| || ||| | | |||||||||||  |  || ||||||||| ||| |||||     
T  393566 aaaattaataaggtctacgatggaccacttttaaggttggtccactataaacatttagaa-ttaaagttaacagtccgggatttatttggcaaacggaga 393664  T
Q  445 aaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  393665 aaaaagtgagggaccaaaagatactttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccgttggatcaaataag 393754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 424 - 534
Target Start/End: Complemental strand, 37882944 - 37882834
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  37882944 gatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaattatttgagggaccatta 37882845  T
Q  524 aatcaaataag 534  Q
    |||||||||||    
T  37882844 aatcaaataag 37882834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 371 - 532
Target Start/End: Original strand, 6349504 - 6349667
Alignment:
Q  371 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    |||||||||||||| ||||||||| || |  ||||| |||||| |||||| |  |||| ||||||  || |||| |||||  ||||||||||||||||||    
T  6349504 cactcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggaccaaaaggtac 6349603  T
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaata 532  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  6349604 gttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattgaatcaaata 6349667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 1831268 - 1831379
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    |||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  1831268 ggatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccatt 1831367  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  1831368 ggatcaaataag 1831379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 310 - 548
Target Start/End: Complemental strand, 52240104 - 52239863
Alignment:
Q  310 atcttttaa-aacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttgga 405  Q
    ||||||||| || |||| ||||||||||| |||| || || ||||||| | |||| | ||||| |||||||||||||||||||||||||| |  |||||     
T  52240104 atcttttaataaaaaaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcatttgg- 52240006  T
Q  406 gttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaa 505  Q
    ||||||||||||  || | ||||||||| ||| ||||| ||||  ||| | ||||||| ||||||||||||||||||||||  ||||| |||||||||||    
T  52240005 gttaaagttaacccttggaatttatttggcaaacggagaaaaacctgaagaaccaaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaa 52239906  T
Q  506 ttatttgagggaccattgaatcaaataagtcatttatttatta 548  Q
    |||||||||||||||||  |||||||||| |||| ||| ||||    
T  52239905 ttatttgagggaccattagatcaaataagccattaattaatta 52239863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 381 - 534
Target Start/End: Complemental strand, 1188996 - 1188843
Alignment:
Q  381 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 480  Q
    |||||| |||||||||| ||| ||  | |||||||||| |  ||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  1188996 gttggttcaccatagacatttagggttaaaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaatt 1188897  T
Q  481 gtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||| ||||| |||| ||||||||||||||||||| |||| ||||||||||    
T  1188896 gtgggaccaaaataaaaacttgaaattatttgagggactattggatcaaataag 1188843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 533
Target Start/End: Original strand, 27850819 - 27851047
Alignment:
Q  302 caatgatcatcttttaaaacaaaaga-tcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt 399  Q
    |||||||| || ||||||| |||||| |||||||||| |||| || | |||||||| | |||| | ||||| ||| |||||||||||||||||||||| |    
T  27850819 caatgatcctcctttaaaaaaaaagaatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacat 27850918  T
Q  400 --tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaa 497  Q
      ||||  |||||| |||||  || ||||||||        ||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||    
T  27850919 catttgaggttaaacttaactgttgggatttata-------cggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaa 27851011  T
Q  498 atttgaaattatttgagggaccattgaatcaaataa 533  Q
    | |||||||||||||||||||||||| |||||||||    
T  27851012 acttgaaattatttgagggaccattggatcaaataa 27851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 400 - 534
Target Start/End: Original strand, 37884259 - 37884393
Alignment:
Q  400 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 499  Q
    ||||| |||||| |||||  | |||||||||||| ||| ||||||||||| | | |||||||||||||| ||||||||||| |||||| |||||||||||    
T  37884259 tttggggttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaat 37884358  T
Q  500 ttgaaattatttgagggaccattgaatcaaataag 534  Q
    || ||||||||||||||||||||||||||||||||    
T  37884359 ttaaaattatttgagggaccattgaatcaaataag 37884393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 425 - 534
Target Start/End: Complemental strand, 24426448 - 24426339
Alignment:
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 524  Q
    |||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||     
T  24426448 atttttttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattgg 24426349  T
Q  525 atcaaataag 534  Q
    ||||||||||    
T  24426348 atcaaataag 24426339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 331 - 535
Target Start/End: Original strand, 42810115 - 42810320
Alignment:
Q  331 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggattta 429  Q
    ||||||| |||| || ||| ||||||||||||| | ||||| ||||||||| ||||| |||||||||| | | || |||||| |||||     |||||||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatctgggggttaaacttaacaccaaggattta 42810214  T
Q  430 tttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaa 529  Q
    |||| ||| ||||||||||  ||||||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||| |||||    
T  42810215 tttggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggactattggatcaa 42810314  T
Q  530 ataagt 535  Q
    ||||||    
T  42810315 ataagt 42810320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 423 - 540
Target Start/End: Complemental strand, 390328 - 390211
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| |||||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| |    
T  390328 ggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaat 390229  T
Q  523 gaatcaaataagtcattt 540  Q
    |||||||||||| |||||    
T  390228 gaatcaaataagccattt 390211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 405 - 534
Target Start/End: Complemental strand, 2311052 - 2310923
Alignment:
Q  405 agttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaa 504  Q
    |||||||||||||  || ||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  2311052 agttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaa 2310953  T
Q  505 attatttgagggaccattgaatcaaataag 534  Q
    |||| ||   ||||||||| ||||||||||    
T  2310952 attaattagaggaccattggatcaaataag 2310923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 44503582 - 44503794
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactctt-aaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    |||| |||||| |||| |||| ||  |||||| ||||||||||| |||||  |||  || |||||| |||||||||| ||| ||  | |||||||||| |    
T  44503582 aaaaaatcaaatggtttaaattaagcaaattattaaggtctacggtggaccatctacaatgttggttcaccatagacatttagggttaaaagttaacggt 44503681  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
      ||||||||||| ||| | ||||||||| ||||||||||||| |||||||| |||||||||| ||| ||||| |||| ||||||||||||||||||| |    
T  44503682 cgggatttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttt-attaattgtgagaccaaaataaaaacttgaaattatttgagggacta 44503780  T
Q  521 ttgaatcaaataag 534  Q
    ||||||||||||||    
T  44503781 ttgaatcaaataag 44503794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 2312383 - 2312598
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | ||||| ||| ||||| |||||||||||||||| |  ||||| |||||| ||||||    
T  2312383 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacg 2312482  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
     |   |||||||||| ||| ||||||||||| ||||||||  ||| |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||    
T  2312483 gtcatgatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggactaaaatggaaacttgaaattatctaagggac 2312582  T
Q  519 cattgaatcaaataag 534  Q
    || || ||||||||||    
T  2312583 caatggatcaaataag 2312598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 40792958 - 40792751
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| ||||| |||||| || |||||||||||||||||| || ||| ||| ||||||||||||||| |||||| |||   |||||||||||||  |  |    
T  40792958 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccacttttaaggttggtccactatagacatttaa-agttaaagttaac--tcgg 40792862  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||| ||||  ||||||||||||| ||| ||||||||||||||||||| |||||||||| || |||||| ||   ||||||||     
T  40792861 gatttatttggcaaacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccatta 40792762  T
Q  524 aatcaaataag 534  Q
    |||||||||||    
T  40792761 aatcaaataag 40792751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 410 - 534
Target Start/End: Complemental strand, 4129117 - 4128993
Alignment:
Q  410 aagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattat 509  Q
    ||||||||| |  ||||||||||| ||| ||||| ||||| | ||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||    
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaattat 4129018  T
Q  510 ttgagggaccattgaatcaaataag 534  Q
    |||||| ||||||| ||||||||||    
T  4129017 ttgaggaaccattggatcaaataag 4128993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 42871206 - 42871095
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |   |||||||||    
T  42871206 ggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaattaatcaggggaccatt 42871107  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  42871106 ggatcaaataag 42871095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 325 - 511
Target Start/End: Complemental strand, 52963778 - 52963592
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||  |||||| |||  |||||||| ||||||| ||| |||||| ||||||||||||||| ||| |||||||||||||||  |       
T  52963778 agatctaaaggttaaaactaacaaatttatgaaggtctatgatggaccacttttaaggctggtccaccatagacattt-ggagttaaagttaacagtcga 52963680  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    |||||||||||||| ||||| ||||  |||||||||||||  |||| ||||||||||||| ||| |||||||||| ||||||||||||    
T  52963679 gatttatttgacaaacggagaaaaacttgagggaccaaaacatacgatttattaattgtgagaccaaaatgaaaacttgaaattattt 52963592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 53205386 - 53205599
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| ||||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| |||||||||||| |||  || |||||||||||       
T  53205386 aaaagatcaaagggttaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatccaccatagacatttgaga-ttaaagttaacacc 53205484  T
Q  421 t-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 519  Q
      |||||||||||| ||| ||||||||||| |||||||| |||| |    |||| ||||||||||||| ||||||||||| |||||||||||| |||||     
T  53205485 catggatttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggact 53205584  T
Q  520 attgaatcaaataag 534  Q
    | |||||||||||||    
T  53205585 aatgaatcaaataag 53205599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 337 - 508
Target Start/End: Original strand, 52241075 - 52241245
Alignment:
Q  337 taaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgac 435  Q
    |||||| ||||||| ||||||||||||  |||||| ||| |||||| ||||| ||||||||  ||| |||||||||||||||| |  | ||||||||| |    
T  52241075 taaaattaacaaaactaataaggtctatcatggaccacttttaaggatggtc-accatagatattt-ggagttaaagttaacggtcggaatttatttggc 52241172  T
Q  436 aatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    || |||||||||| |||||| | ||||| |||||||||||||||||||| |  ||||||||||  ||||||||    
T  52241173 aaacggaggaaaagatgaggaatcaaaacgtacgttttattaattgtggaatcaaaatgaaaacatgaaatta 52241245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 349 - 534
Target Start/End: Complemental strand, 11968698 - 11968511
Alignment:
Q  349 aattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttg-gagttaaagttaacgatttggatttatttgacaatcggaggaa 446  Q
    |||||||| | |||| ||||||| |||||||||||||||||| ||||||| |  |  ||||||||||| ||     | |||||||| |||| ||||| ||    
T  11968698 aattaataggatctatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttattttacaaacggagcaa 11968599  T
Q  447 aaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||  ||||||||||||| ||| ||||||||||||||| ||| |||||||||| |||||||||||||||| |||||   ||||||||||    
T  11968598 aatctgagggaccaaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattatttgaggaaccataagatcaaataag 11968511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 334 - 508
Target Start/End: Original strand, 23203869 - 23204043
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 432  Q
    ||||||||| ||||||||||||||||||||| || || |||| ||||||||| |||||||||||   ||| |||||||||||||   || ||||||| ||    
T  23203869 ggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccataga-tatttagagttaaagttaatacttgggatttaatt 23203967  T
Q  433 gacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    | ||| ||||| |||| |||| ||||||||| |    ||||||||| |||||||| ||||||||||| ||||||||    
T  23203968 ggcaaacggagaaaaagatgacggaccaaaacgccatttttattaaatgtgggaccaaaatgaaaatatgaaatta 23204043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 322 - 536
Target Start/End: Complemental strand, 27847889 - 27847676
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| |||  |||| |||||||| || ||| || |||||| |||||  |    
T  27847889 aaaagatcaaagggttaaaattga-aaaattaataaggtctatggtggactatctataatcttggcccaccatatacatttggg-gttaaacttaaccgt 27847792  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
     |||||||||||| ||| |||| |||||| | ||||||| |||  ||| |||||||||||||||||| ||||| |||| |||||||||||||||| |  |    
T  27847791 ctggatttatttggcaaacggaagaaaaattaagggaccgaaaaatacattttattaattgtgggaccaaaataaaaacttgaaattatttgaggaatta 27847692  T
Q  521 ttgaatcaaataagtc 536  Q
    ||  ||||||||||||    
T  27847691 ttagatcaaataagtc 27847676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 427 - 533
Target Start/End: Original strand, 42872308 - 42872414
Alignment:
Q  427 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaat 526  Q
    ||||||| ||| ||||||||||| ||||||||||||| |||| ||||||||||| |||||| |||||||||| | | ||||| ||  |||||||||||||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaaatggtaattaattaggggaccattgaat 42872407  T
Q  527 caaataa 533  Q
    |||||||    
T  42872408 caaataa 42872414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 287 - 547
Target Start/End: Original strand, 15449942 - 15450204
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||||| ||  || ||||||||||||| | |||||| ||||| ||| |||| || || ||||||| | |||| | ||||| ||||||||||||||    
T  15449942 tagacatgcatgatctaacgatcatcttttaataaaaaagagcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttgg 15450041  T
Q  386 tccaccatagac--gttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    ||||| ||||||    |||||||||||| |||||   |  |||||||||| ||| ||||||||||  | || |||  ||| |||||||||||||| |  |    
T  15450042 tccacgatagacaacatttggagttaaacttaac-cgtaagatttatttggcaaacggaggaaaaggtaagcgacttaaacgtacgttttattaactaag 15450140  T
Q  484 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttatttatt 547  Q
    |||  | ||||||||  ||||||||||| |||||||| ||||||||||||| | ||||| ||||    
T  15450141 ggatcataatgaaaacctgaaattatttaagggaccaatgaatcaaataagccttttatatatt 15450204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 520
Target Start/End: Original strand, 1588096 - 1588191
Alignment:
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||||||||  || ||||||||||| |||||||   ||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  1588096 atttatttggtaaacggaggaaaaagtgagggatttaaacgtacattttattaattgtgggactaaaatgaaaacttaaaattatttgagggacca 1588191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 348 - 508
Target Start/End: Original strand, 10168711 - 10168873
Alignment:
Q  348 aaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggagga 445  Q
    ||||||||||||| |||| |||||  ||| ||| ||||||||||||||||| ||| || ||||||||||||  |  |||||||||||| ||| |||||||    
T  10168711 aaattaataaggtgtacggtggaccatctataatgttggtccaccatagacatttgggggttaaagttaactgtcatggatttatttggcaaacggagga 10168810  T
Q  446 aaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  10168811 aaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 10168873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 424 - 534
Target Start/End: Complemental strand, 44501628 - 44501518
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| | ||| ||||| ||||||||  ||| |||||||||||||||| |||||| | |||||||| ||||||||||||||||||||| ||    
T  44501628 gatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaatg 44501529  T
Q  524 aatcaaataag 534  Q
      |||||||||    
T  44501528 gttcaaataag 44501518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 423 - 544
Target Start/End: Original strand, 1190197 - 1190318
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| | ||| ||||| ||||| ||  ||| |||||||||||||||| |||||| |||||||||| || |||||||||||||||||| |    
T  1190197 ggatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaat 1190296  T
Q  523 gaatcaaataagtcatttattt 544  Q
    |  ||||||||| |||| ||||    
T  1190297 ggttcaaataagccattaattt 1190318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 322 - 517
Target Start/End: Complemental strand, 53432275 - 53432079
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatg-gacactcttaaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    |||||||||||||||||||||  | |||||||||||||| || | || | ||||||||| |||||| |||||||||| ||| || |||||| |||||  |    
T  53432275 aaaagatcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccatagacatttggg-gttaaacttaaccgt 53432177  T
Q  421 ttgg-atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
      || ||||||||||| | || ||| |||  |||||||||||||  || ||||||||| || |||||| |||||||||| ||||||||| || |||||    
T  53432176 cagggatttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53432079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 322 - 517
Target Start/End: Original strand, 53435656 - 53435852
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaa-cga 419  Q
    |||||||||||||||||||||  | ||||||||| | ||||||| |||| ||||||||||||||||| |||||||||  |||  ||||||| |||| ||     
T  53435656 aaaagatcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagac-atttaaagttaaacttaaccgt 53435754  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
       ||||||||||||| | |||||| |||  |||||| ||||||  |  ||||||||| || |||||| |||||||||| ||||||||| || |||||    
T  53435755 caaggatttatttgaccaacggaggtaaacttgaggggccaaaacatgagttttattacttatgggaccaaaatgaaaacttgaaattaattaaggga 53435852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 31968397 - 31968508
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| | ||||||||| ||| ||||||||| |||||||||||||||||| |||| |||||||||| || |||||| ||  |||||| ||    
T  31968397 ggatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggaccgtt 31968496  T
Q  523 gaatcaaataag 534  Q
    | ||| ||||||    
T  31968497 ggatctaataag 31968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 334 - 498
Target Start/End: Original strand, 7708704 - 7708868
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 432  Q
    ||||| ||| |||||||||||||||||||| |||| | |||| |||||||||||||||||||||   ||| ||||||||||||||  || ||||||||||    
T  7708704 ggttagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccataga-tatttagagttaaagttaacacttgggatttattt 7708802  T
Q  433 gacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    | ||| | ||| ||||  |||||||| |||| |    ||||||||||||| | || ||||||||||    
T  7708803 ggcaaacagagaaaaaggtgagggactaaaacgccacttttattaattgtagaaccaaaatgaaaa 7708868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 536
Target Start/End: Complemental strand, 31965946 - 31965833
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| |||| |||| |||||||| |||| | ||| |||| ||||||||| ||  |||| ||||    
T  31965946 ggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaattaattaggggatcatt 31965847  T
Q  523 gaatcaaataagtc 536  Q
      ||||||||||||    
T  31965846 agatcaaataagtc 31965833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 508
Target Start/End: Complemental strand, 13165718 - 13165522
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtta 409  Q
    |||||||||| |||||||||||||||| |||| || | ||||||| | ||||| | ||||| |||||||||||||||||||||||||   |||| |||||    
T  13165718 tcttttaaaa-aaaagatcaaacggtttaaattaaaataattaatgaagtctatggtggaccactcttaaggttggtccaccataga-aatttgaagtta 13165621  T
Q  410 aagttaac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    || ||||| |    ||||||||||||||| |||||||||| |||| |||| |||| |    |||||||||||  ||||| ||||||||||  ||||||||    
T  13165620 aacttaacagtcaaggatttatttgacaaacggaggaaaagatgaaggacgaaaacgccatttttattaatt-agggaccaaaatgaaaacatgaaatta 13165522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 508
Target Start/End: Complemental strand, 7707803 - 7707614
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||||||||||| |||| |||| |  ||||| ||||||| ||||     
T  7707803 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaacc 7707704  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     |  ||||||||||| ||| | ||||||||  ||| |||| |||| ||   |||||||||||||||||| ||||||||||  ||||||||    
T  7707703 gtcaggatttatttggcaaacagaggaaaatgtgatggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaatta 7707614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 508
Target Start/End: Complemental strand, 10167536 - 10167451
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||||||||| |||||||||| ||||||||| |||| | |  ||||||||||||||| || ||||||||||  ||||||||    
T  10167536 ggatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaatta 10167451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 4871369 - 4871480
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||||||| ||||| ||||  || |||||  |||  ||||||||||||||||| | || ||||||||||  |||||||||||  ||||||| |    
T  4871369 ggatttatttgacaaacggagaaaaacgtgggggacttaaacatacgttttattaattgtagaaccaaaatgaaaacatgaaattattttggggaccaat 4871468  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  4871469 ggatcaaataag 4871480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 508
Target Start/End: Original strand, 13533165 - 13533350
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| ||||||||||||||||| ||| | ||||||| |||||  |    
T  13533165 aaaagatcaaatggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatagacattt-gaagttaaatttaacagt 13533262  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     ||||||||||||||   |||||  |||  |||||||||||||  |  ||||| ||| || ||| ||||| ||||||| |||||||||    
T  13533263 ctggatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttatggaactaagatgaaaacttgaaatta 13533350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 510
Target Start/End: Complemental strand, 49342832 - 49342643
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac--- 417  Q
    ||||||||||||||| |||||  | ||||||||| | || ||   ||||| ||| ||||||||||||||| |||||||||| || |||||| |||||       
T  49342832 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtttatagtggaccacttttaaggttggtccactatagacgtttggg-gttaaacttaacacc 49342734  T
Q  418 gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatt 510  Q
    || |   |||||||| ||||  |||||||||| ||||||||  ||| |||| |||||||||||||||||  |||||||||| || ||||||||    
T  49342733 gaata--atttatttaacaaatggaggaaaaagtgagggacttaaacgtacattttattaattgtgggatcaaaatgaaaacttaaaattatt 49342643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 53701559 - 53701647
Alignment:
Q  15 agaggagaagttgttaaggaggaag----agaagaggtgcattattaagagaggatttaaaaatgaagattgagttgtaaagtgggtga 99  Q
    ||||||||||||| |||| ||||||    |||||| ||| |||||| || |||||||||||||||||||||| ||||| ||||||||||    
T  53701559 agaggagaagttggtaagaaggaaggacgagaagatgtgtattatttagggaggatttaaaaatgaagattgggttgtgaagtgggtga 53701647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 2311163 - 2311090
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagac 397  Q
    ||||| || ||||||||| ||||| |||||||||||||||||| || |||| ||||| ||||||||||||||||    
T  2311163 agatcgaatggttaaaattaacaatattaataaggtctacgatagaccacttttaagattggtccaccatagac 2311090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 506
Target Start/End: Original strand, 33232629 - 33232785
Alignment:
Q  348 aaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaa 446  Q
    |||||||||||||||||  ||| || ||| ||| |||||||||| |||||| |||  |||||||||||||||     |||||||||| ||| ||||||||    
T  33232629 aaattaataaggtctaccgtggcca-tctataatgttggtccacaatagacattt--gagttaaagttaacggaaaagatttatttggcaaacggaggaa 33232725  T
Q  447 aaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaat 506  Q
    ||  |||||||| |||| |    |||||||||||||||||| ||||| ||||| ||||||    
T  33232726 aatgtgagggactaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaat 33232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 511
Target Start/End: Original strand, 54485530 - 54485638
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    |||||||||||||   |||| |||||||||| ||| |||| |||||  ||||||| ||||| | | |||||||||||| |||||  |||||||||| |||    
T  54485530 gagttaaagttaatagtttgtgatttatttggcaaacggatgaaaacttgagggatcaaaacgaatgttttattaattatgggatcaaaatgaaaacttg 54485629  T
Q  503 aaattattt 511  Q
    |||||||||    
T  54485630 aaattattt 54485638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 44498709 - 44498598
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||| ||||  |||| ||||||||||| | |||| |||||||||||  ||| || | |||||||| | |||| | ||||| |||||||||||||     
T  44498709 tagacatgcgtaatctaatggtcatcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttga 44498610  T
Q  386 tccaccatagac 397  Q
    ||||||||||||    
T  44498609 tccaccatagac 44498598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 49344015 - 49344126
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatga-gggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    |||||||||| ||| ||||||||||| ||| |||||  |||   ||||||||||||||||||||| ||||| |||  || |||||||||   ||||||||    
T  49344015 gatttatttggcaaacggaggaaaaagtgaagggacttaaacccacgttttattaattgtgggaccaaaataaaagcttaaaattatttagaggaccatt 49344114  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  49344115 ggatcaaataag 49344126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 520
Target Start/End: Original strand, 669678 - 669747
Alignment:
Q  451 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||||||||||||| ||  |||||||||||| |||||| ||||||||||||  |||||| ||| |||||||    
T  669678 tgagggaccaaaatgtgagttttattaattatgggaccaaaatgaaaattgaaaattaattgggggacca 669747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 508
Target Start/End: Complemental strand, 23201973 - 23201872
Alignment:
Q  407 ttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaat 506  Q
    ||||| |||||| || ||||||||||| ||| ||||||||||  ||||||||||||| |    ||||||||| |||||||| ||||| ||||  ||||||    
T  23201973 ttaaacttaacggttgggatttatttggcaaacggaggaaaaggtgagggaccaaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaat 23201874  T
Q  507 ta 508  Q
    ||    
T  23201873 ta 23201872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 496
Target Start/End: Complemental strand, 50547017 - 50546944
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaa 496  Q
    ||||||||||| ||| ||| |||||| ||||||||| |||| |    |||||||||||||||||||||||||||    
T  50547017 ggatttatttggcaaacggtggaaaagatgagggactaaaacgccatttttattaattgtgggactaaaatgaa 50546944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 7053425 - 7053321
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    ||||||||||| ||  || |||| |||||||| | ||||||||||||| || |||| || |||||||||| | |||| | |||| |||||||||| ||||    
T  7053425 tagacatgcatgatctaacgatcctcttttaataaaaaagatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattgg 7053326  T
Q  386 tccac 390  Q
    |||||    
T  7053325 tccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 33231547 - 33231415
Alignment:
Q  377 taaggttggtccaccatagacgttttggagttaaagttaacgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttat 475  Q
    ||||||| ||||||||||||| |||  | |||||| ||||| | | || ||||||||| ||| ||| | |||| ||||||||| ||||      ||||||    
T  33231547 taaggtttgtccaccatagacatttgagggttaaacttaacaagtatgaatttatttggcaaacggtgaaaaagatgagggactaaaacaccatttttat 33231448  T
Q  476 taattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||||||||||||||||  ||||||||    
T  33231447 taattgtgggactaaaatgaaaacatgaaatta 33231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 510
Target Start/End: Complemental strand, 54484444 - 54484336
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaat-gaaaattt 501  Q
    ||||||||||||||  |||| |||||||||| ||| | ||||||||  | ||||||||||| | |||||||||||||| ||| || |||||  ||||||     
T  54484444 gagttaaagttaacagtttgagatttatttggcaaacagaggaaaattttagggaccaaaacgaacgttttattaattatggtaccaaaataaaaaattg 54484345  T
Q  502 gaaattatt 510  Q
    |||||||||    
T  54484344 gaaattatt 54484336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 417
Target Start/End: Complemental strand, 56085560 - 56085465
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac 417  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||||||| |||||||||||||  ||||| ||||||||||||    
T  56085560 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccatagac-atttggggttaaagttaac 56085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 349 - 418
Target Start/End: Complemental strand, 4871680 - 4871610
Alignment:
Q  349 aattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacg 418  Q
    |||||||| | |||||| ||||| |||||| ||||||||||||||||||| |||  | |||||||||||||    
T  4871680 aattaataggatctacggtggaccactctttaggttggtccaccatagacatttgagggttaaagttaacg 4871610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 498
Target Start/End: Original strand, 50548188 - 50548303
Alignment:
Q  381 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 480  Q
    |||||||||| |||||| |||  ||||||||||| |||    ||||||||||| ||| | ||||||||  |||||||| |||| ||   | |||||||||    
T  50548188 gttggtccacaatagacattt--gagttaaagttgacggaaaggatttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaatt 50548285  T
Q  481 gtgggactaaaatgaaaa 498  Q
    ||||||| ||||||||||    
T  50548286 gtgggaccaaaatgaaaa 50548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 500
Target Start/End: Complemental strand, 40723390 - 40723262
Alignment:
Q  371 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 470  Q
    |||||||||||||||||||||||| ||  ||||  |||||| |||||  | ||||||||||||||   |||||  |||  | |||||||||||  |  ||    
T  40723390 cactcttaaggttggtccaccatatac-atttgaggttaaacttaacagtatggatttatttgaccgacggagataaacctaagggaccaaaacatgagt 40723292  T
Q  471 tttattaattgtgggactaaaatgaaaatt 500  Q
    ||||||| || |||||| ||||||||||||    
T  40723291 tttattagttatgggaccaaaatgaaaatt 40723262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 4714233 - 4714157
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 397  Q
    ||||||||||| |||||||||  | || |||||| | ||||| | ||||| ||||||||||||| ||||||||||||    
T  4714233 aaaagatcaaatggttaaaatttaaaatattaatgaagtctatggtggaccactcttaaggttgatccaccatagac 4714157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 56000532 - 56000448
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac 371  Q
    ||||||| || ||| ||| |||| |||||| || ||||| |||||| ||||||||| || ||| ||| ||||||||||| |||||    
T  56000532 tagacatacacaatccaacgatcctctttttaatcaaaatatcaaatggttaaaattaaaaaacttagtaaggtctacggtggac 56000448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 4e-55; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 314 - 534
Target Start/End: Complemental strand, 47454557 - 47454337
Alignment:
Q  314 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaag 412  Q
    ||||||| |||| |||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| | ||||||||    
T  47454557 tttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagacatttag-agttaaag 47454459  T
Q  413 ttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttg 512  Q
    ||||   |  ||||||||||| ||| || || ||||  ||||||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||    
T  47454458 ttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaagcttgaaattatttg 47454359  T
Q  513 agggaccattgaatcaaataag 534  Q
    |||||||| || ||||||||||    
T  47454358 agggaccactggatcaaataag 47454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 326 - 534
Target Start/End: Original strand, 32256304 - 32256511
Alignment:
Q  326 gatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgg 424  Q
    |||| |||||||||||| |||||||| | |||||| ||| |||||| ||| |||| ||||||||||||||||| ||| | |||||||||||||| || |     
T  32256304 gatcgaacggttaaaattaacaaaat-attaaggtttacaatggaccacttttaatgttggtccaccatagacattt-gaagttaaagttaacggttgga 32256401  T
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 524  Q
    ||||||||| |||  |||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||||     
T  32256402 atttatttggcaaatggaggaaaaagtgagggaccaaaaggtacattttattaattatgggaccaaaatgaaaacttgaaattatttgagggaccattgg 32256501  T
Q  525 atcaaataag 534  Q
    ||||||||||    
T  32256502 atcaaataag 32256511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 6173356 - 6173566
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    |||| ||||||| ||||| || |||||||||| ||||||||||||||||| ||| |||| |||||||||| |||||  ||| | ||||||||||||  |     
T  6173356 aaaaaatcaaacagttaagattaacaaaatta-taaggtctacgatggaccacttttaaagttggtccactatagatatttag-agttaaagttaat-ag 6173452  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
     |||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||| ||||   |||||||||| |||||||||||||||||||||    
T  6173453 atggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggacca 6173552  T
Q  521 ttgaatcaaataag 534  Q
    ||| ||||||||||    
T  6173553 ttggatcaaataag 6173566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 334 - 520
Target Start/End: Original strand, 41079751 - 41079936
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 432  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||| |||| |||||||||||  ||| |||||||||||||||| |  ||||||||||    
T  41079751 ggttaaaatcaacaaaattaataaggtctacgatggaccacttttaatgttgttccaccatagatattt-ggagttaaagttaacggtagggatttattt 41079849  T
Q  433 gacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
      ||| |||||||||| || ||||||||||| |||||||||||| |||||||||| ||||| |||| | ||||||| |||||||||||    
T  41079850 agcaaacggaggaaaagataagggaccaaaacgtacgttttatt-attgtgggaccaaaataaaaaatggaaattaattgagggacca 41079936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 322 - 520
Target Start/End: Complemental strand, 32255204 - 32255003
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||||||||||| || |  ||||| |||||| |||||     
T  32255204 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaacc 32255105  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
     |  ||||||||||| ||| ||||||||||| ||||||| ||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  32255104 gtcgggatttatttggcaaacggaggaaaaagtgagggatcaaaatgtacgttttattaattatgggaccaaaataaaaatttgaaattatttgagggac 32255005  T
Q  519 ca 520  Q
    ||    
T  32255004 ca 32255003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 322 - 533
Target Start/End: Original strand, 43460725 - 43460938
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgtt-ttggagttaaagttaacga 419  Q
    ||||||||||| |||| |||| || | |||||||| | |||| | ||||| |||||||| ||||||||||||||||| |  || |||||||| |||||      
T  43460725 aaaagatcaaagggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactg 43460824  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 519  Q
    |  ||||||||||| |||  |||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||||| || |||| |||||||||| |    
T  43460825 tgaggatttatttggcaaatggaggaaaaagtgagggactaaaatgtacgttttattaattgtgggaccaaaatgaaaacttcaaataatttgagggatc 43460924  T
Q  520 attgaatcaaataa 533  Q
    ||||||||||||||    
T  43460925 attgaatcaaataa 43460938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 290 - 534
Target Start/End: Complemental strand, 47059357 - 47059108
Alignment:
Q  290 acatgcataattcaatgatcatcttttaaaacaaa-agatcaaacggttaaaatgaacaaaa--ttaataaggtctacgatggac-actcttaaggttgg 385  Q
    |||||| |||| ||||| ||||| ||| ||| ||| ||||||||||||| |||| || ||||  ||||||||||||| | ||| | |||||||||||||     
T  47059357 acatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggctactcttaaggttgc 47059258  T
Q  386 tccaccatagacgttttggag--ttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    |||||||||||| ||||||||  ||||| |||||| |  ||||||||||| ||| ||||||||||| ||||||| ||||| |||| |||||||||||||     
T  47059257 tccaccatagac-ttttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtacattttattaattgta 47059159  T
Q  484 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||| |||||||||| || |||||| ||  |||||||||||||| ||||||    
T  47059158 ggaccaaaatgaaaacttaaaattaattaggggaccattgaatctaataag 47059108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 33096980 - 33096869
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  33096980 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccatt 33096881  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  33096880 ggatcaaataag 33096869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 43459664 - 43459455
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| || | | ||||||||| |||||||||||| ||| ||||||||| |||||          
T  43459664 agatcgaatggttaaaattaacaaaattaataaggtctacgatgtaccatttttaaggttgatccaccatagacattt-ggagttaaacttaacagccga 43459566  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| |||||||||| |||||||||  ||| | ||||||||||||||||||||| |||||||||| ||||||||||||  ||||| | ||    
T  43459565 gatttatttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggactaatg 43459466  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  43459465 gatcaaataag 43459455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 47456381 - 47456491
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| | || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  47456381 gatttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattg 47456480  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  47456481 gatcaaataag 47456491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 296 - 534
Target Start/End: Complemental strand, 40508618 - 40508378
Alignment:
Q  296 ataattcaatgatcat-cttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccat 393  Q
    ||||| |||||||||| ||||||||| || | ||||||||||||||||  | ||||||||| |  |||| | |||||| |||||||| ||| ||||||||    
T  40508618 ataatccaatgatcattcttttaaaaaaacatatcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccat 40508519  T
Q  394 agacgttttggagttaaagttaac---gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaa 490  Q
    |||| ||| ||| ||||| |||||   ||   ||||||||||| | | ||||||||||| ||||||||  ||| ||||||||||||||||||||||| ||    
T  40508518 agacatttggga-ttaaacttaacaccgaa--ggatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaa 40508422  T
Q  491 aatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||||| ||||||||||||  |||||||||| ||||||||||    
T  40508421 aatgaaaacttgaaattatttaggggaccattggatcaaataag 40508378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 424 - 527
Target Start/End: Complemental strand, 30333395 - 30333292
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| ||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatg 30333296  T
Q  524 aatc 527  Q
    ||||    
T  30333295 aatc 30333292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 322 - 542
Target Start/End: Original strand, 40509637 - 40509858
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac--- 417  Q
    |||||||||||| || |||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||| |||||| ||| || |||||| |||||       
T  40509637 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagacatttggg-gttaaacttaacacc 40509735  T
Q  418 gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
    || |  ||||||||||  || ||||||||||| ||||| ||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||  ||||    
T  40509736 gaat--gatttatttggtaaacggaggaaaaagtgaggaacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttagggga 40509833  T
Q  518 ccattgaatcaaataagtcatttat 542  Q
    |||||||| |||||||| |||||||    
T  40509834 ccattgaaacaaataagccatttat 40509858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 30310232 - 30310121
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||||||||| ||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||    
T  30310232 ggatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgtgggacaaaaatgaaaacttgaaattatttaagggactatt 30310133  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  30310132 ggatcaaataag 30310121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 45455378 - 45455488
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| |    
T  45455378 gatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttgaaattaattaagggaccatcg 45455477  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  45455478 gatcaaataag 45455488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 322 - 542
Target Start/End: Original strand, 22115067 - 22115289
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac--- 417  Q
    |||||||||||| || |||||  | ||||||||| | ||||| | ||||| ||||||||||||||||||| |||||| ||| || |||||| |||||       
T  22115067 aaaagatcaaacagtcaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccactatagacatttggg-gttaaacttaacacc 22115165  T
Q  418 gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttga-ggg 516  Q
    ||    ||||||||||   | ||||||||||| ||||| ||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| | |||    
T  22115166 gaan--gatttatttggtnaacggaggaaaaagtgaggaacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattttagggg 22115263  T
Q  517 accattgaatcaaataagtcatttat 542  Q
    ||||||||| |||||||| |||||||    
T  22115264 accattgaaacaaataagccatttat 22115289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 325 - 508
Target Start/End: Complemental strand, 11501389 - 11501206
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||  |||| |||||||||||||  |  |    
T  11501389 agatcgaatggttaaaattaacaaaattaataaggtctacaatgaaccacttttaaggttggtccaccatagac-atttgaagttaaagttaacagtcgg 11501291  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| |||  |||||||||  |||||||| |||| |    ||||||||| |||||||| ||||||||||  ||||||||    
T  11501290 gatttatttggcaaatggaggaaaaggtgagggactaaaatgctatttttattaactgtgggaccaaaatgaaaacatgaaatta 11501206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 4299951 - 4300164
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac--- 417  Q
    ||||||||||||||| |||||  | ||||||||| | ||||| | ||| | ||||||||||||| ||||| |||||||||| || |||||| |||||       
T  4299951 aaaagatcaaacggtcaaaatttaaaaaattaatgaagtctatggtgggccactcttaaggttgatccactatagacgtttggg-gttaaacttaacacc 4300049  T
Q  418 gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
    ||    |||||||||| ||| | ||||||||| ||||||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||   ||||    
T  4300050 gaaa--gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattcagggga 4300147  T
Q  518 ccattgaatcaaataag 534  Q
    | |||| ||||||||||    
T  4300148 cgattggatcaaataag 4300164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 374 - 508
Target Start/End: Original strand, 30334597 - 30334727
Alignment:
Q  374 tcttaaggttggtccaccatagacgttttggagttaaagttaacgatttgga-tttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttt 472  Q
    |||||| |||||||| |||||||| ||| | ||||| | |||||| |||||| |||||||| ||| |||||| |    ||||||||||||||||||||||    
T  30334597 tcttaaagttggtcctccatagacatttag-agttagatttaacggtttggaatttatttggcaaacggaggga----tgagggaccaaaaggtacgttt 30334691  T
Q  473 tattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||||||||||||||||||| |||||||||    
T  30334692 tattaattgtgggactaaaatgaaaacttgaaatta 30334727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 534
Target Start/End: Complemental strand, 32603043 - 32602933
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||| ||||| |||||||| |||| |||||||||||||||| |||||| ||||| |||| |||||||||||||| |||||| ||    
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaatg 32602944  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  32602943 gatcaaataag 32602933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 347 - 508
Target Start/End: Original strand, 40812542 - 40812703
Alignment:
Q  347 aaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 445  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||| |    |||||||||||||| |||  |  |||| |||||||||| | |||||    
T  40812542 aaaattaataagatctacgatggatcacttttaaggttggtccaccat-ggttatttggagttaaagtaaacagtcgggatatatttgacaaacagagga 40812640  T
Q  446 aaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||| |||||||| ||||| |||||||||||||||| ||| || ||||||||||  ||||||||    
T  40812641 aaatatgagggagcaaaacgtacgttttattaattatggaaccaaaatgaaaacatgaaatta 40812703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 297 - 534
Target Start/End: Original strand, 47060354 - 47060591
Alignment:
Q  297 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatag 395  Q
    |||||||||| ||||| ||| ||| || | |||||||| ||||| |  | ||| ||||||||||||| | ||||| | |||||||||||||||||||||     
T  47060354 taattcaatggtcatccttttaaaaaacaaatcaaacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccatat 47060453  T
Q  396 acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatga 495  Q
    || ||| || |||||| |||||  |  ||||||||||| ||| ||||  |||   ||||||||||||| |||||||||||||||| | |||| |||||||    
T  47060454 acattt-ggtgttaaacttaacagtccggatttatttggcaaacggaaaaaagggtgagggaccaaaacgtacgttttattaattataggaccaaaatga 47060552  T
Q  496 aaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||| || |||||| ||  |  ||||||||||| ||||||    
T  47060553 aaacttaaaattaattaggaaaccattgaatctaataag 47060591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 533
Target Start/End: Complemental strand, 46835785 - 46835676
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| | ||||||||| |||| |||  |||  ||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  46835785 gatttatttgacaaacagaggaaaaattgagagacttaaaaatacattttattaattgtaggactaaaaagaaaatttgaaattatttaagggaccattg 46835686  T
Q  524 aatcaaataa 533  Q
     |||| ||||    
T  46835685 gatcatataa 46835676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 45454149 - 45454038
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||| |||||||| |||| ||| |||||||||||| || ||| ||||||||||  |||||||| ||  |||||||||    
T  45454149 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggaccatt 45454050  T
Q  523 gaatcaaataag 534  Q
     |||||||||||    
T  45454049 taatcaaataag 45454038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 339 - 508
Target Start/End: Original strand, 22538769 - 22538938
Alignment:
Q  339 aaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaa 437  Q
    |||| |||||||||||| ||||||||||| |||  || |||| |||||| |||||||||  ||| |||||||||||||||  |   |||||||||| |||    
T  22538769 aaataaacaaaattaatgaggtctacgatagaccgcttttaatgttggtacaccatagatattt-ggagttaaagttaaccgtcgagatttatttggcaa 22538867  T
Q  438 tcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     |||||||||| ||||||||| |||| ||   |||||||||||||||||| |||| |||||  ||||||||    
T  22538868 acggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaacatgaaatta 22538938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 22691190 - 22691116
Alignment:
Q  314 tttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtc 387  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||    
T  22691190 tttaaaacaaaagatcaaacggttaaaataaacaaaatttataaggtatacgatggaccactcttaagattggtc 22691116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 445 - 534
Target Start/End: Original strand, 30311496 - 30311585
Alignment:
Q  445 aaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||||  ||| ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| | || ||||||||||    
T  30311496 aaaaaatgagggacttaaacgtatgttttattaattgtgggaccaaaatgaaaatttgaaattatttaggggactaatggatcaaataag 30311585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 448
Target Start/End: Original strand, 22337288 - 22337401
Alignment:
Q  335 gttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttg 433  Q
    |||||||| |||||||||||||||||||||| || || ||  ||||||||||||||||||||||  |||| ||||||| |||||| |  |||||||||||    
T  22337288 gttaaaattaacaaaattaataaggtctacggtgtactacatttaaggttggtccaccatagac-atttgaagttaaatttaacggtcaggatttatttg 22337386  T
Q  434 acaatcggaggaaaa 448  Q
     ||| ||||||||||    
T  22337387 gcaaacggaggaaaa 22337401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 424 - 510
Target Start/End: Complemental strand, 11344614 - 11344531
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatt 510  Q
    |||||||||||||| |||||   ||||||| ||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  11344614 gatttatttgacaaacggag---aaaatgaaggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatt 11344531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 498
Target Start/End: Original strand, 13564150 - 13564319
Alignment:
Q  331 aacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgtt--ttggagttaaagttaacgatttggatt 427  Q
    ||||||| |||| || | |||||||| | |||| | ||||| |||||||||| || |||||||||||| ||  |||| |||||| |||||| |  |||||    
T  13564150 aacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaacg-tcgggatt 13564248  T
Q  428 tatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    |||||| ||| ||||||||||  |||||||| |||| |   ||||||||||||||||||| ||||||||||    
T  13564249 tatttggcaaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaatgaaaa 13564319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 302 - 534
Target Start/End: Complemental strand, 4298948 - 4298713
Alignment:
Q  302 caatgatcat-cttttaaaacaaa-agatcaaacggttaaaatgaacaaaattaataaggtctacgatggaca-ctcttaaggttggtccaccatagacg 398  Q
    |||||||||| ||||||||| ||| | ||||||||||||||||  | ||||||||| | ||||| | |||||| |||||| | ||| ||||||||| |||    
T  4298948 caatgatcattcttttaaaaaaaacatatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaggattgatccaccatacacg 4298849  T
Q  399 ttttggagttaaagttaacg--atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaa 496  Q
    ||| || |||||| |||||   |  || ||||||||| ||| | ||||||||| ||||||||  |||   || |||||||||||||||||  ||||| ||    
T  4298848 tttagg-gttaaacttaacatcaaatg-atttatttggcaaacagaggaaaaagtgagggacttaaacccacattttattaattgtgggatcaaaataaa 4298751  T
Q  497 aatttgaaattatttgagggaccattgaatcaaataag 534  Q
    || || |||||||||  |||||||||| ||||||||||    
T  4298750 aacttaaaattatttaggggaccattggatcaaataag 4298713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 534
Target Start/End: Complemental strand, 40811394 - 40811340
Alignment:
Q  480 tgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  40811394 tgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataag 40811340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 511
Target Start/End: Complemental strand, 3413779 - 3413555
Alignment:
Q  288 agacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggt 386  Q
    ||||| ||||||||||||||| ||||||| |   || ||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||||||| ||| |    
T  3413779 agacacgcataattcaatgatgatctttttagcaaacagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgat 3413680  T
Q  387 ccaccatagacgttttggagttaaagttaac-gatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtggg 485  Q
    |||||||||||  | || ||||||| ||||| | |  ||||||||||| ||| | ||| ||||  |||||||| |||| |    ||||||||||||| ||    
T  3413679 ccaccatagac-atctgaagttaaacttaacagttagggatttatttggcaaacagagtaaaaggtgagggactaaaacgccatttttattaattgtagg 3413581  T
Q  486 actaaaatgaaaatttgaaattattt 511  Q
    || ||||||||||   ||||||||||    
T  3413580 accaaaatgaaaacacgaaattattt 3413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 508
Target Start/End: Original strand, 9662141 - 9662326
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  ||| ||| ||||||||||||||||| ||| | ||||||| |||||  |    
T  9662141 aaaagatcaaatggttaaaattga-aaaattaataaggtctatggtggactatctataatgttggtccaccatagacattt-gaagttaaatttaacagt 9662238  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     ||||||||||||||   |||||  |||  |||||||||||||  |  ||||| ||| || ||| ||||| ||||||| |||||||||    
T  9662239 ctggatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttatggaactaagatgaaaacttgaaatta 9662326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 439 - 534
Target Start/End: Original strand, 33779105 - 33779200
Alignment:
Q  439 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||||||||  ||||||| |||| ||  ||||||||||||||||| | |||||||||| ||||||||||||  ||||| | || ||||||||||    
T  33779105 cggaggaaaaagcgagggactaaaacgtgagttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataag 33779200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 397
Target Start/End: Complemental strand, 40811546 - 40811458
Alignment:
Q  310 atcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagac 397  Q
    ||||||||| | |||||||||||||||| |||| || || |||||||   |||| | ||||| ||||||||||||||||||||||||||    
T  40811546 atcttttaataaaaaagatcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagac 40811458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 376 - 520
Target Start/End: Complemental strand, 41078915 - 41078770
Alignment:
Q  376 ttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 473  Q
    ||||| ||||||||||||| || |  ||||| ||||||||||||  |  ||||||||| | |||  |||||||||  | | ||| |||||| ||| ||||    
T  41078915 ttaagattggtccaccatatacatcatttgg-gttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggatcaaaagatacttttt 41078817  T
Q  474 attaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    || ||||||||||| |||||||||| | ||||||| |||||||||||    
T  41078816 atcaattgtgggaccaaaatgaaaaatggaaattaattgagggacca 41078770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 338 - 416
Target Start/End: Original strand, 44554687 - 44554764
Alignment:
Q  338 aaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaa 416  Q
    ||||| ||||||||||||||| |||||| |||||  |  ||| |||||||||||||||||  |||||||||||||||||    
T  44554687 aaaattaacaaaattaataagatctacggtggaccattataatgttggtccaccatagac-atttggagttaaagttaa 44554764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 418
Target Start/End: Original strand, 669292 - 669387
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacg 418  Q
    |||||||||||||||| |||| ||||||||||||| | |||| | |||| ||||||||| | |||||||||||||||  ||||  |||||||||||||    
T  669292 aaaagatcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaa-gatggtccaccatagac-atttgaggttaaagttaacg 669387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 35295909 - 35295816
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacg 418  Q
    ||||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||||||||||| |||   ||||| |||||||||||||    
T  35295909 agatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccacaga-tatttggggttaaagttaacg 35295816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 423 - 511
Target Start/End: Original strand, 3414839 - 3414927
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    ||||||||||| |||  |||||||||| ||| |||| |||| |    ||||||||||| |||||| ||||||||||  |||||||||||    
T  3414839 ggatttatttggcaaatggaggaaaaagtgaaggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattattt 3414927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 7e-51; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 32798434 - 32798648
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgtt-ttggagttaaagttaacga 419  Q
    |||||||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||||||| |||||||||||| |  || |||||||| |||||      
T  32798434 aaaagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccg 32798533  T
Q  420 tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 519  Q
    |  ||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  32798534 tgaggatttatttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacc 32798633  T
Q  520 attgaatcaaataag 534  Q
    |||| ||||||||||    
T  32798634 attgcatcaaataag 32798648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 325 - 534
Target Start/End: Original strand, 44076267 - 44076479
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatt 421  Q
    |||||||| |||| |||| || |||||||||||| | || | |||| || | |||| |||| |||||||||||| |  ||||| |||||| |||||  |     
T  44076267 agatcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgta 44076366  T
Q  422 tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccat 521  Q
     ||||||||||| ||| ||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  44076367 gggatttatttggcaaacggaggaaaaattgaggcaccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaattatttgagggaccat 44076466  T
Q  522 tgaatcaaataag 534  Q
    || ||||||||||    
T  44076467 tggatcaaataag 44076479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 287 - 519
Target Start/End: Complemental strand, 22551254 - 22551022
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||||||| ||||||||  ||||||||| ||| || ||||||||||||| |||| |  ||| |||||||||| || | |||| |||| |||||||| |    
T  22551254 tagacatgcaaaattcaattgtcatctttttaaaaaacagatcaaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttg 22551155  T
Q  386 tccaccatagacgttttggagttaaagttaacgattt-ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgg 484  Q
    ||||||||||| | ||||| |||||| ||||| ||   ||||||||||| |||  |||| ||||| |||||||||||||| |||||||||||||||||||    
T  22551154 tccaccataga-gatttggggttaaacttaacaatccaggatttatttggcaaatggag-aaaaagtgagggaccaaaagatacgttttattaattgtgg 22551057  T
Q  485 gactaaaatgaaaatttgaaattatttgagggacc 519  Q
    ||| ||||| |||| ||||||||||||||||||||    
T  22551056 gaccaaaataaaaacttgaaattatttgagggacc 22551022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 32694039 - 32693830
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgat-ggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    |||||||||||||||||| || ||||||||||||||||| ||| || |||| |||||||||||||| |||| || |||   |||||||||||||  || |    
T  32694039 agatcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcatatacatttaa-agttaaagttaactgttgg 32693941  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||||||||  ||| ||||||||  ||| ||||||||||||||||||| |||||||||| || |||||| ||   |||||||||    
T  32693940 gatttatttggcaaacggaggaaaatctgaaggaccaaagcgtatgttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggaccattg 32693841  T
Q  524 aatcaaataag 534  Q
    |||||||||||    
T  32693840 aatcaaataag 32693830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 334 - 533
Target Start/End: Complemental strand, 41629908 - 41629709
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 432  Q
    ||||||||| ||||||||||||||||| ||||||| || ||| ||||||||||| |||||||||| |||||||||| ||||||||| |  ||||||||||    
T  41629908 ggttaaaattaacaaaattaataaggtatacgatgaaccacttttaaggttggttcaccatagac-ttttggagttcaagttaacggtcgggatttattt 41629810  T
Q  433 gacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaata 532  Q
    | ||| |||| |||||  ||||||| |||||  |||||||||||||||||| ||| ||||| |||| ||||||||||||  ||||| | || ||||||||    
T  41629809 ggcaaacggaagaaaacttgagggatcaaaatatacgttttattaattgtgagaccaaaataaaaacttgaaattatttaggggactaatggatcaaata 41629710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 324 - 534
Target Start/End: Complemental strand, 30786888 - 30786676
Alignment:
Q  324 aagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaa--gttaacgat 420  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||| ||| |||| |||| |||||||||||| ||| | |||||||  ||||||  |    
T  30786888 aagatcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacatttag-agttaaaaagttaacagt 30786790  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
      | ||||||||| ||| ||||| ||||| ||||||| |||||  ||||||||||||||| || ||  |||||||||| || ||||||||||| ||||||    
T  30786789 cggaatttatttggcaaacggagaaaaaagtgagggatcaaaatatacgttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggacca 30786690  T
Q  521 ttgaatcaaataag 534  Q
    ||||||||||||||    
T  30786689 ttgaatcaaataag 30786676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 290 - 539
Target Start/End: Complemental strand, 42871060 - 42870808
Alignment:
Q  290 acatgcataattcaatgatcatc-ttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtc 387  Q
    |||||| |||||||||| ||||| |||||||||| | |||||||||||| |||| |  ||| ||||||||||||||| ||||| ||||||||| ||||||    
T  42871060 acatgcgtaattcaatggtcatccttttaaaacaca-gatcaaacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtc 42870962  T
Q  388 caccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtggg 485  Q
    ||| |||||| |  ||||| |||||| |||||  |  ||||| ||| | ||| | || |||||| | |||||| |||| |||||||||||||||||||||    
T  42870961 cacaatagacatcttttggggttaaacttaacagtcaggattcattcggcaaacagacgaaaaagtaagggactaaaacgtacgttttattaattgtggg 42870862  T
Q  486 actaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatt 539  Q
    || |||||||||| ||||||||||||  |  ||||||| |||||||||| ||||    
T  42870861 accaaaatgaaaacttgaaattatttaggaaaccattggatcaaataagccatt 42870808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 371 - 534
Target Start/End: Original strand, 42872143 - 42872305
Alignment:
Q  371 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgt 470  Q
    ||||||||||||||||| ||||||||| |||  | ||||||||||||  |  ||||||||||||||| ||||||||||| ||| |||| |||| ||||||    
T  42872143 cactcttaaggttggtctaccatagacatttgag-gttaaagttaaccgtcaggatttatttgacaaacggaggaaaaagtgaaggactaaaacgtacgt 42872241  T
Q  471 tttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||| ||| || || ||||||||||| || ||||||||| ||||||||||| ||||||||||    
T  42872242 tttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattggatcaaataag 42872305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 325 - 511
Target Start/End: Complemental strand, 45279889 - 45279703
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| |||||||||| ||||||||||||| ||| ||| |||||  |||||||||||| || ||| | |||||||||||||  |  |    
T  45279889 agatcgaatggttaaaattaacaaaattattaaggtctacgatagaccacttttaagactggtccaccatatacatttag-agttaaagttaaccgtcgg 45279791  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    |||||||||| ||| || |  ||||  ||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  45279790 gatttatttgccaaacgaaaaaaaacttgagggaccaaaacgtacgttttattaattgtatgactaaaatgaaaatttgaaattattt 45279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 325 - 508
Target Start/End: Original strand, 42100013 - 42100196
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||  |||| |||||||||||||  |  |    
T  42100013 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagac-atttgaagttaaagttaacagtcgg 42100111  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    || ||||||| ||| |||||||||| |||||||| ||||| |    |||||||||||||| ||| ||||||||||  ||||||||    
T  42100112 gaattatttggcaaacggaggaaaatatgagggatcaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaatta 42100196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 26696643 - 26696532
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| |||  |||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||| ||  |||||||||    
T  26696643 ggatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggaccatt 26696544  T
Q  523 gaatcaaataag 534  Q
    ||||||||||||    
T  26696543 gaatcaaataag 26696532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 325 - 534
Target Start/End: Complemental strand, 32797350 - 32797138
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| || | | ||||||||| |||| ||||||| ||| ||||||||| ||||||         
T  32797350 agatcgaatggttaaaattaacaaaattaataaggtctacgatgaaccatttttaaggttgatccatcatagacattt-ggagttaaacttaacggccgc 32797252  T
Q  424 gatttatt---tgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||||||||   ||  || ||||||||||  ||||||||  ||| ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  32797251 gatttattatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggacca 32797152  T
Q  521 ttgaatcaaataag 534  Q
     |  ||||||||||    
T  32797151 atagatcaaataag 32797138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 287 - 534
Target Start/End: Original strand, 45281056 - 45281304
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttgg 385  Q
    ||||||||||| ||  || | ||||||||||| | |||||||||||||||| |||| || || ||||||| | | || | | ||| ||||||||||||||    
T  45281056 tagacatgcatgatctaacgttcatcttttaataaaaaagatcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttgg 45281155  T
Q  386 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    |||||| ||||| |  |||||| |||||||||||  || ||||||||||| |||  |||||||||  ||| ||| |||||  ||  |||||||||||||     
T  45281156 tccaccgtagacatcatttgga-ttaaagttaactgttgggatttatttggcaaatggaggaaaatctgaaggatcaaaacatat-ttttattaattgtt 45281253  T
Q  484 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||||||||||    
T  45281254 ggaccaaaatgaaaacttgaaattatttgagggactattggatcaaataag 45281304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 303 - 511
Target Start/End: Complemental strand, 6398014 - 6397806
Alignment:
Q  303 aatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttt 401  Q
    |||||||||| |||  || || |||||||| |||| |||| || ||||||||||||||||| | ||||| ||| | |||||||||  |||||||   |||    
T  6398014 aatgatcatcctttttaaaaacagatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccactgtaaaggttggtttaccatagttattt 6397915  T
Q  402 tggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaattt 501  Q
     ||||||||| |||||  |   |||||||||| ||| ||||| |||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| |    
T  6397914 -ggagttaaatttaacattcatgatttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaatat 6397816  T
Q  502 gaaattattt 511  Q
    ||||||||||    
T  6397815 gaaattattt 6397806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 404 - 520
Target Start/End: Original strand, 28420159 - 28420276
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||||||||||||||  |||| |||||||||||||| |||||||||||||||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  28420159 gagttaaagttaacagtttgagatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 28420258  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| ||||||||    
T  28420259 aaattatttaagggacca 28420276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 32695176 - 32695391
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| | ||||||| ||||| |||||||||| |  ||||| |||||| ||||||    
T  32695176 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacg 32695275  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
     |  ||| | ||||| ||| | ||||||||  ||| ||||  ||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  32695276 gtcaggactaatttggcaaacagaggaaaacgtgaaggacttaaacgtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggac 32695375  T
Q  519 cattgaatcaaataag 534  Q
    || |||||||||||||    
T  32695376 caatgaatcaaataag 32695391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 306 - 534
Target Start/End: Complemental strand, 4810695 - 4810469
Alignment:
Q  306 gatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--ttt 402  Q
    |||| |||||||| | |||||||||||| ||| |||| || || ||||||| | |||| | ||||| ||||||||      |||||||||||| |  |||    
T  4810695 gatcctcttttaataaaaaagatcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaat-----tccaccatagacatcattt 4810601  T
Q  403 ggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    || ||||||||||||  |  ||||||||||| ||| ||||| ||||  ||| |||||||||  ||||||||||||||| |||||| ||||| ||||||||    
T  4810600 ggggttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaaatttg 4810501  T
Q  503 aaattatttgagggaccattgaatcaaataag 534  Q
    ||| ||||||||||||||||  ||||||||||    
T  4810500 aaagtatttgagggaccattagatcaaataag 4810469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 41630129 - 41630240
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    |||||||||| |||| |  || ||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||    
T  41630129 ggatttatttaacaaacatagaaaaaattgagggacttaaaggtacgttttattaattgtgagactaaaatgaaaatttaaaattatttaaggaaccatt 41630228  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  41630229 ggatcaaataag 41630240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 404 - 520
Target Start/End: Complemental strand, 28418937 - 28418820
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||||||||||||||  |||| |||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  28418937 gagttaaagttaacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattg 28418838  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| ||||||||    
T  28418837 aaattatttaagggacca 28418820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 381 - 498
Target Start/End: Original strand, 26697796 - 26697912
Alignment:
Q  381 gttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaatt 480  Q
    |||||||||||||| || ||| || |||||| ||||| ||| ||||||||| |||||  ||| |||||| |||||||| |||| ||||||||||||||||    
T  26697796 gttggtccaccataaacatttggg-gttaaacttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaatt 26697894  T
Q  481 gtgggactaaaatgaaaa 498  Q
     |||||||||||||||||    
T  26697895 atgggactaaaatgaaaa 26697912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 325 - 508
Target Start/End: Complemental strand, 13116539 - 13116356
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||| ||||| |||||||||||||| ||||| ||| |||||| |  |||||| ||| |||||||||||||||  |  |    
T  13116539 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattatagacattt-ggagttaaagttaacagtcgg 13116441  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| ||| ||||||||||  ||| |||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  13116440 gatttatttggcaaacggaggaaaatgtgaaggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 13116356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 8570229 - 8570118
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| | |||  |||| ||||||||||||| |||||||||||||||||| |||| ||||||||||  |||||||| ||  |||||||||    
T  8570229 ggatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggaccatt 8570130  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  8570129 ggatcaaataag 8570118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 422 - 494
Target Start/End: Complemental strand, 29103599 - 29103527
Alignment:
Q  422 tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatg 494  Q
    |||||||||||  ||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||||||    
T  29103599 tggatttatttagcaatcggaggaaaaaatgagggactcaaatgtacgttttattaattgtgggaccaaaatg 29103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 534
Target Start/End: Complemental strand, 239643 - 239426
Alignment:
Q  317 aaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagtta 415  Q
    |||| ||||||||||| | ||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||| |||||||| ||| || ||||||||||    
T  239643 aaaaaaaaagatcaaaggattaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatcc-ccatagacatttggg-gttaaagtta 239546  T
Q  416 acgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgag 514  Q
    ||     | |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| |    
T  239545 acacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttggg 239446  T
Q  515 ggaccattgaatcaaataag 534  Q
    |||| | || ||||||||||    
T  239445 ggactaatggatcaaataag 239426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 534
Target Start/End: Complemental strand, 792998 - 792781
Alignment:
Q  317 aaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagtta 415  Q
    |||| ||||||||||| | ||||||| ||||||||| |||| |||||||  ||||  ||| ||| |||| ||| |||||||| ||| || ||||||||||    
T  792998 aaaaaaaaagatcaaaggattaaaattaacaaaattgataaagtctacggcggaccatctataatgttgatcc-ccatagacatttggg-gttaaagtta 792901  T
Q  416 acgatt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgag 514  Q
    ||     | |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| |    
T  792900 acacccatagatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttggg 792801  T
Q  515 ggaccattgaatcaaataag 534  Q
    |||| | || ||||||||||    
T  792800 ggactaatggatcaaataag 792781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 30787605 - 30787716
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| |||| |||||| |||||||||||||  ||  ||||||||||| |||||| |||||||||| || |||||||||||| || ||||    
T  30787605 ggatttatttggcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaacttaaaattatttgagagaacatt 30787704  T
Q  523 gaatcaaataag 534  Q
      ||||||||||    
T  30787705 agatcaaataag 30787716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 212718 - 212828
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  212718 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 212817  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  212818 gatcaaataag 212828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 726341 - 726451
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  726341 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 726440  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  726441 gatcaaataag 726451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 798842 - 798952
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| || |||||||| |||||||| ||||     ||||| ||||||||||||| ||||||||||| |||||||||||| ||||| | ||    
T  798842 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaattatttgggggactaatg 798941  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  798942 gatcaaataag 798952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 508
Target Start/End: Original strand, 8571574 - 8571707
Alignment:
Q  376 ttaaggttggtccaccatagacgttttggagttaaagttaac-ga-tttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt 473  Q
    |||| |||||||||||||||||  ||||| |||||| ||||| || |  |||||||||||  || ||||| ||||||||| ||||||||| |||||||||    
T  8571574 ttaaagttggtccaccatagac-atttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgtttt 8571672  T
Q  474 attaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||  ||| ||||||||||| ||||||||    
T  8571673 attaattgtatgaccaaaatgaaaatgtgaaatta 8571707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 534
Target Start/End: Original strand, 13197962 - 13198057
Alignment:
Q  439 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||| ||||||||  ||| |||| |||||||||||||||||| |||| ||||| | |||||||||| | ||||||||| | ||||||||    
T  13197962 cggaggaaaaagtgagggacttaaacgtaccttttattaattgtgggaccaaaacgaaaactcgaaattatttaatggaccattggagcaaataag 13198057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 503
Target Start/End: Original strand, 29104371 - 29104450
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttga 503  Q
    |||||||||||||| | ||||||||||||||||||  |||  |||||||||||||||||||||  ||||| |||||||||    
T  29104371 gatttatttgacaaacagaggaaaaaatgagggacttaaacatacgttttattaattgtgggatcaaaataaaaatttga 29104450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 424 - 533
Target Start/End: Original strand, 6398503 - 6398613
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatg-aaaatttgaaattatttgagggaccatt 522  Q
    |||||||||||||| |||||||||||||||||||| |||| |   |||||||||||| || ||| |||||| ||||| | |||||||||  ||||||| |    
T  6398503 gatttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaaatctaaaattatttaggggaccaat 6398602  T
Q  523 gaatcaaataa 533  Q
     ||||||||||    
T  6398603 aaatcaaataa 6398613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 489 - 534
Target Start/End: Original strand, 12850466 - 12850511
Alignment:
Q  489 aaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12850466 aaaatgaaaatttgaaattatttgagggaccattggatcaaataag 12850511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 517
Target Start/End: Complemental strand, 211706 - 211612
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  211706 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 517
Target Start/End: Original strand, 240550 - 240644
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  240550 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 517
Target Start/End: Complemental strand, 725329 - 725235
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  725329 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 725235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 517
Target Start/End: Original strand, 793905 - 793999
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgaggga 517  Q
    |||||||||||  || ||||| ||||| | |||||| |||| ||  ||||||||||||||||||| ||||||||||  ||||||||||| |||||    
T  793905 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaaggga 793999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 17339531 - 17339639
Alignment:
Q  400 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 499  Q
    |||||||||||| |||||  |  ||||||||||| ||| ||||||||||  |||||||| |||| |    ||||||||||||| |||| |||||||||||    
T  17339531 tttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaat 17339630  T
Q  500 ttgaaatta 508  Q
     ||||||||    
T  17339631 atgaaatta 17339639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 397
Target Start/End: Original strand, 14840767 - 14840878
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||| ||||||||||||| ||||||||| | | || | ||||||||||| |||| || ||| ||||||||  ||| | |||| |||| |||| |||||    
T  14840767 tagacacgcataattcaatggtcatctttttagaaaacatatcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttgg 14840866  T
Q  386 tccaccatagac 397  Q
    ||||||||||||    
T  14840867 tccaccatagac 14840878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 451 - 534
Target Start/End: Original strand, 17702308 - 17702391
Alignment:
Q  451 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||||||||||  || ||||||||| || |||||| |||||||||||| ||||||| || |||||||| | |||||| ||||    
T  17702308 tgagggaccaaaacataggttttattagttatgggaccaaaatgaaaattggaaattaattaagggaccaataaatcaagtaag 17702391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 417
Target Start/End: Original strand, 24192555 - 24192661
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtta 409  Q
    |||||||| | |||| |||||||||||  ||| || | |||||||| | |||| | ||||| |||||||||||||||||||||||||| ||| || ||||    
T  24192555 tcttttaagaaaaaaaatcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacatttagg-gtta 24192653  T
Q  410 aagttaac 417  Q
    ||||||||    
T  24192654 aagttaac 24192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 417
Target Start/End: Complemental strand, 24305266 - 24305160
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagtta 409  Q
    ||||||||||||||||||||||  ||| || |  | |||||||||| | |||| ||| || ||||||||| ||||||||||||||||| ||| || ||||    
T  24305266 tcttttaaaacaaaagatcaaatagttgaagtttaaaaaattaataggatctaagatagatcactcttaatgttggtccaccatagacatttagg-gtta 24305168  T
Q  410 aagttaac 417  Q
    ||||||||    
T  24305167 aagttaac 24305160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 508
Target Start/End: Original strand, 45437487 - 45437572
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||||||| | |||||| ||| | ||||||||||||  |  |||||||||||| |||||  |||||||||| |||||||||    
T  45437487 ggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaaacttgaaatta 45437572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 9854772 - 9854879
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagtta 409  Q
    |||||||||| |||| |||||| |||| |||| |  | |||||||| | |||| | ||||| |||||||| ||||||||||||||||| ||| || ||||    
T  9854772 tcttttaaaaaaaaa-atcaaatggtttaaattagaagaattaataggatctatggtggaccactcttaaagttggtccaccatagacatttgggggtta 9854870  T
Q  410 aagttaacg 418  Q
    |||||||||    
T  9854871 aagttaacg 9854879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 17338151 - 17338067
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| ||| ||||| ||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  17338151 gatttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 17338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 34617066 - 34617150
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac 371  Q
    |||||||||| ||| ||| |||| |||||| ||  |||| |||||| ||||||||| || ||| ||| ||||||||||| |||||    
T  34617066 tagacatgcagaatccaacgatcctctttttaactaaaatatcaaatggttaaaattaaaaaatttagtaaggtctacggtggac 34617150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 28562713 - 28562925
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactct-taaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| |||||||||    ||| ||||||||||||| | |||||  ||| ||| |||||||||||||| |  ||| ||| ||||| |||||  |    
T  28562713 aaaagatcaaagggttaaaattggaaaatttaataaggtctatggtggactatctataatgttggtccaccatatatatttggga-ttaaacttaacagt 28562811  T
Q  421 ttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
     |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28562812 ctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaattatttgagggacca 28562911  T
Q  521 ttgaatcaaataag 534  Q
    ||||||||||||||    
T  28562912 ttgaatcaaataag 28562925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 371 - 534
Target Start/End: Original strand, 11317320 - 11317484
Alignment:
Q  371 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 469  Q
    ||||||||||||||||| ||||||||| |  || |||||||| |||||  |  ||||||||||| ||| ||||||||||| |||||||||||||  || |    
T  11317320 cactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgccaaacggaggaaaaattgagggaccaaaatatatg 11317419  T
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11317420 ttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 11317484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 424 - 533
Target Start/End: Original strand, 43034477 - 43034586
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  43034477 gatttatttgacaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagattaaaatgaaaacttgaaattatttgagggaccattg 43034576  T
Q  524 aatcaaataa 533  Q
    ||||||||||    
T  43034577 aatcaaataa 43034586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 297 - 534
Target Start/End: Complemental strand, 43033319 - 43033082
Alignment:
Q  297 taattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatag 395  Q
    |||| ||||| || ||||||| || ||| ||||| | |||| |||| || | |||||||| ||| || | ||||| |||||||||||||||| |||||||    
T  43033319 taatccaatggtcctcttttagaagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatag 43033220  T
Q  396 acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatga 495  Q
    || |||  | |||||| |||||     ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  43033219 acatttgag-gttaaacttaacatcgaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatga 43033121  T
Q  496 aaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||| |||||||||||| ||||| ||||| ||||||||||    
T  43033120 aaacttgaaattatttaagggatcattggatcaaataag 43033082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 325 - 534
Target Start/End: Original strand, 32470482 - 32470691
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||| | | ||||||||  |||||||||||| ||| ||||||||| |||||     |    
T  32470482 agatcgaatggttaaaattaacaaaattaataaggtctacgatggaccatttttaaggtttatccaccatagacattt-ggagttaaacttaacagccgg 32470580  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||||||| |||||||||| |||||| ||  ||| ||||||||||||||||||||||| ||||| |||| ||||||||||||  ||||| | ||    
T  32470581 gatttatttgacaaacggaggaaaacatgaggaacttaaacgtacgttttattaattgtgggaccaaaataaaaacttgaaattatttaggggactaatg 32470680  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  32470681 gatcaaataag 32470691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 347 - 534
Target Start/End: Original strand, 17460613 - 17460800
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 445  Q
    ||||||||||||||||||||| ||| ||| ||||| |||||||||||||||| |||   |||||||||||||| |  |||||||||||  || |||||||    
T  17460613 aaaattaataaggtctacgatagaccacttttaagattggtccaccatagacatttaa-agttaaagttaacggtcgggatttatttgggaaacggagga 17460711  T
Q  446 aaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||  ||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||| ||   ||||||||| ||||||||||    
T  17460712 aaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattaattagaggaccattggatcaaataag 17460800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 371 - 534
Target Start/End: Complemental strand, 32469313 - 32469148
Alignment:
Q  371 cactcttaaggttggtccaccatagacgtt-ttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac- 468  Q
    ||||||||| |||||||||||||| || |  || |||||||| ||||| ||  ||||||||||| ||| ||||||||||| ||| ||||||||||||||     
T  32469313 cactcttaaagttggtccaccatatacataatttgagttaaacttaactataaggatttatttggcaa-cggaggaaaaagtgaaggaccaaaaggtaca 32469215  T
Q  469 -gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
     ||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||    
T  32469214 cgttttattaattgtgggatcaaaatgaaaacttgaaattatttgagggaccattgaatcaaataag 32469148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 311 - 533
Target Start/End: Original strand, 42641752 - 42641975
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagt 407  Q
    |||||||||| |||||||||||| ||| |||| || | |||||||| | |||| | | ||| |||||||||||||| ||||||||||| |  ||||| ||    
T  42641752 tcttttaaaaaaaaagatcaaacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagacatcatttgg-gt 42641850  T
Q  408 taaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatt 507  Q
    | || ||||   |  ||||||||||| ||| ||||  ||||| || ||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||    
T  42641851 tgaacttaattgtgaggatttatttggcaaacggaa-aaaaagtgggggaccaaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaatt 42641949  T
Q  508 atttgagggaccattgaatcaaataa 533  Q
    ||||||||||||||||||||||||||    
T  42641950 atttgagggaccattgaatcaaataa 42641975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 347 - 534
Target Start/End: Complemental strand, 11316120 - 11315933
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggagga 445  Q
    ||||||||||||||||||| ||||| | | ||||||||| |||||||||||| ||| ||| ||||| |||||     ||||||||||| ||| |||||||    
T  11316120 aaaattaataaggtctacggtggaccatttttaaggttgatccaccatagacattt-ggaattaaacttaacagccgggatttatttggcaaacggagga 11316022  T
Q  446 aaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||  ||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||||||||||  ||||||| ||||| |||||||    
T  11316021 aaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaatgaattaaataag 11315933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 534
Target Start/End: Original strand, 6030337 - 6030586
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    ||||||||||| ||  || | ||||||||||| | |||||||||||||||| |||| || || ||||||| | |||| | | || |||||||||||||||    
T  6030337 tagacatgcatgatataacgttcatcttttaataaaaaagatcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttgg 6030436  T
Q  386 tccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
    |||||| ||||| |  ||||| ||||||||||||  ||  |||||||||| |||   |||||||| |||| ||| ||||| |||| ||| ||||||||||    
T  6030437 tccaccgtagacatcatttgg-gttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatcaaaacgtacttttaattaattgtg 6030535  T
Q  484 ggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    |||  |||||||||| || |||||||||||||||| |||| ||||||||||    
T  6030536 ggatcaaaatgaaaacttcaaattatttgagggactattggatcaaataag 6030586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 425 - 536
Target Start/End: Complemental strand, 28561477 - 28561366
Alignment:
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 524  Q
    ||||||||||||| || |||||||  |||||||||||||| |||||||||||||||||| ||| |||||||||| || ||||||||| ||||||||||||    
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaagatacgttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggaccattga 28561378  T
Q  525 atcaaataagtc 536  Q
    ||||||||||||    
T  28561377 atcaaataagtc 28561366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 348 - 532
Target Start/End: Complemental strand, 7436652 - 7436469
Alignment:
Q  348 aaattaataaggtctacgatggacactctt-aaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaa 446  Q
    |||||||||| |||||||||||||  |||  || |||||| ||||||| || ||| || |||| | |||||  || ||||||||||||||| |||| |||    
T  7436652 aaattaataaagtctacgatggactatctacaatgttggttcaccatatacatttggg-gttagacttaactgttaggatttatttgacaaacggaagaa 7436554  T
Q  447 aaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaata 532  Q
    ||| ||||| |||||||||||  ||||||||||||| |||| ||||| |||| |||||||||||||||||||||||| ||||||||    
T  7436553 aaattgagg-accaaaaggtatattttattaattgtaggaccaaaataaaaacttgaaattatttgagggaccattggatcaaata 7436469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 439 - 534
Target Start/End: Original strand, 7437782 - 7437877
Alignment:
Q  439 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||  ||||||| ||||||||||    
T  7437782 cggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagcaaccattggatcaaataag 7437877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 534
Target Start/End: Complemental strand, 17459362 - 17459253
Alignment:
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattga 524  Q
    ||||||||| ||| ||||||||||| ||||||||  ||| ||||||||||||||||||| ||| |||||||||| |||||||||||| |||||| | ||     
T  17459362 atttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaaaacttgaaattatttaagggactaatgg 17459263  T
Q  525 atcaaataag 534  Q
    ||||||||||    
T  17459262 atcaaataag 17459253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 325 - 508
Target Start/End: Complemental strand, 1083197 - 1083014
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||| || || |||| ||||||||| |||||||||||   ||| ||||||||||||||  || |    
T  1083197 agatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccaccataga-tatttagagttaaagttaacacttgg 1083099  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||| ||| ||| ||||| |||| |||| |||||||||      ||||||||| |||||||| ||||||||||| ||||||||    
T  1083098 gatttaattggcaaacggagaaaaagatgacggaccaaaacaccatttttattaaatgtgggaccaaaatgaaaatatgaaatta 1083014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 287 - 394
Target Start/End: Original strand, 34513421 - 34513529
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttgg 385  Q
    |||||| ||||||| ||||||||||||||| ||| || ||||||||||||| |||| || ||||||||||||||||| | |||| |||||||||||||||    
T  34513421 tagacacgcataatccaatgatcatctttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttgg 34513520  T
Q  386 tccaccata 394  Q
    || ||||||    
T  34513521 tcaaccata 34513529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 371 - 543
Target Start/End: Complemental strand, 11547824 - 11547650
Alignment:
Q  371 cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtac 468  Q
    ||||| |||||||||||||  |||||| |  ||||| |||||| |||||  |  ||||||||||||||| || |||||||||||||||   ||||  |      
T  11547824 cactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtcaggatttatttgacaaacgaaggaaaaaatgaggggttaaaacatgt 11547725  T
Q  469 gttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataagtcatttatt 543  Q
    |||||||||||| || ||| |||||||||| |||||||||||| | |||||| | ||||||||||| ||||||||    
T  11547724 gttttattaattatgagaccaaaatgaaaacttgaaattatttaaaggaccaataaatcaaataagccatttatt 11547650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 508
Target Start/End: Complemental strand, 29219595 - 29219411
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttg 423  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||| |||||||||||||||| |  ||||| |||||| |||||  || |    
T  29219595 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29219496  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  29219495 gatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 29219411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 508
Target Start/End: Complemental strand, 29332894 - 29332710
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttg 423  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| ||| ||||| |||||||||||||||| |  ||||| |||||| |||||  || |    
T  29332894 atcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgg 29332795  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  29332794 gatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 29332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 322 - 520
Target Start/End: Original strand, 2277372 - 2277571
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactctta-aggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    ||||||||||| |||||||||  | ||||||||||||||||| | |||||  |||   | ||||||||||||||||| ||| || ||||||||||||       
T  2277372 aaaagatcaaagggttaaaattgaaaaaattaataaggtctatggtggactatctaccatgttggtccaccatagacatttggg-gttaaagttaactcc 2277470  T
Q  421 t-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacc 519  Q
      ||||||||||||||   | ||||  ||  |||||||||||||  || ||||||||| || |||||| |||||||||| | ||||||||||||||||||    
T  2277471 catggatttatttgaccgactgaggtgaacttgagggaccaaaacataagttttattacttatgggaccaaaatgaaaactggaaattatttgagggacc 2277570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 508
Target Start/End: Original strand, 18616907 - 18617096
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||| |||||  ||||||||||||||| |  ||||| |||||| ||||      
T  18616907 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaata 18617006  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     || ||||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  18617007 gttgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaatta 18617096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 520
Target Start/End: Complemental strand, 34147350 - 34147150
Alignment:
Q  322 aaaagatcaaacggttaaaat-gaacaaaattaataaggtctacgatggacactctta-aggttggtccaccatagacgttttggagttaaagttaacga 419  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||| | |||||  |||   | ||||||||||||||||| ||| || ||||||||||||      
T  34147350 aaaagatcaaagggttaaaattgaaaaaaattaataaggtctatggtggactatctaccatgttggtccaccatagacatttggg-gttaaagttaacac 34147252  T
Q  420 tt-tggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
       ||||||||||||||   ||||||  ||  |||||||||||||  |  ||||||||| || |||||| |||||||||| |  ||||||||||||||||    
T  34147251 ccatggatttatttgactggcggaggtgaacttgagggaccaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttgagggac 34147152  T
Q  519 ca 520  Q
    ||    
T  34147151 ca 34147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 442 - 518
Target Start/End: Original strand, 12359703 - 12359779
Alignment:
Q  442 aggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
    |||||||||||||||||||||| |    ||||||||||||||||||||||| |||||  ||||||||||| ||||||    
T  12359703 aggaaaaaatgagggaccaaaacgccaattttattaattgtgggactaaaacgaaaacatgaaattatttaagggac 12359779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 534
Target Start/End: Original strand, 36011648 - 36011757
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||  |||||||||||||| |||| |||| ||||||||||| ||||| ||||||| ||| || ||||||||| | ||| || ||    
T  36011648 gatttatttggcaaacggattaaaaaatgagggactaaaacgtacattttattaattatgggattaaaatg-aaacttaaaattatttaaaggatcaatg 36011746  T
Q  524 aatcaaataag 534  Q
     ||||||||||    
T  36011747 gatcaaataag 36011757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 6028926 - 6028834
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgttttggagttaaagttaac 417  Q
    ||||| || ||||||||| |||||||||| |||||||||||||||| |||| |||||  |||||||||||| ||  ||| ||||||||||||||    
T  6028926 agatcgaatggttaaaattaacaaaattattaaggtctacgatggaccacttttaagactggtccaccatatac-atttagagttaaagttaac 6028834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 508
Target Start/End: Complemental strand, 6030716 - 6030631
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||||| ||| ||||||||||||| ||| || |||| |    |||||||||||||||||||||||||||||  ||||||||    
T  6030716 ggatttatttggcaaacggaggaaaaaataaggaactaaaacgccaattttattaattgtgggactaaaatgaaaacatgaaatta 6030631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 508
Target Start/End: Complemental strand, 44191247 - 44191162
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    ||||||||||||||| | | |||||  ||||||||| |||| | |  |||||||||||||||||||||||||||||  ||||||||    
T  44191247 ggatttatttgacaaacagtggaaacgatgagggactaaaatgcaatttttattaattgtgggactaaaatgaaaacatgaaatta 44191162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 451
Target Start/End: Original strand, 6032217 - 6032347
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-ca-ctcttaaggttggtccaccatagacgttttggagttaaagttaacga 419  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||||||| ||  |||| | ||||||| |||||||||  |||| ||||||||||||||     
T  6032217 aaaagatcaaacggctaaaattaattaaattaataaggtctacgatggatcatgtctt-atgttggtcaaccatagac-atttgaagttaaagttaacgg 6032314  T
Q  420 t-ttggatttatttgacaatcggaggaaaaaat 451  Q
    |  |||||||||||| ||| | |||||||||||    
T  6032315 tcatggatttatttggcaaacagaggaaaaaat 6032347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 442 - 533
Target Start/End: Complemental strand, 36010669 - 36010578
Alignment:
Q  442 aggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataa 533  Q
    |||||||| |||||||| ||||  |||||||||||||| ||  ||| ||||||||||  ||||||||||| |||||| | || |||||||||    
T  36010669 aggaaaaagtgagggactaaaatatacgttttattaatcgtaagaccaaaatgaaaacatgaaattatttaagggactaatggatcaaataa 36010578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 508
Target Start/End: Original strand, 29220928 - 29220966
Alignment:
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  29220928 ttttattaattgtgggaccaaaatgaaaatatgaaatta 29220966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 508
Target Start/End: Original strand, 29334227 - 29334265
Alignment:
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  29334227 ttttattaattgtgggaccaaaatgaaaatatgaaatta 29334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 37957013 - 37956963
Alignment:
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||||||| || |||||| |||||||||||||||||||| || ||||||||    
T  37957013 ttttattacttatgggaccaaaatgaaaatttgaaattaattaagggacca 37956963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 615 - 669
Target Start/End: Original strand, 41099465 - 41099519
Alignment:
Q  615 gaaaattgttcttcccacatcaaaaattgctatgacacacctggaaattacacat 669  Q
    |||||||| | ||||||| | | |||||||||||| |||||||||||||||||||    
T  41099465 gaaaattgcttttcccactttagaaattgctatgaaacacctggaaattacacat 41099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 520
Target Start/End: Complemental strand, 2276364 - 2276295
Alignment:
Q  451 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||||||||||||  |  ||||||||| || | ||||||||||||||| |  ||||||||||||||||||    
T  2276364 tgagggaccaaaacatgagttttattacttataggactaaaatgaaaactgaaaattatttgagggacca 2276295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 520
Target Start/End: Original strand, 34148393 - 34148462
Alignment:
Q  451 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||||||||||||  |  ||||||||| || ||| ||||||||||||| |  ||||||||||||||||||    
T  34148393 tgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggacca 34148462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 12095483 - 12095439
Alignment:
Q  328 tcaaacggttaaaatgaacaaaattaataaggtctacgatggaca 372  Q
    |||||| |||||||| || ||| ||||||||||||||||||||||    
T  12095483 tcaaacagttaaaattaaaaaatttaataaggtctacgatggaca 12095439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 522
Target Start/End: Original strand, 23233760 - 23233800
Alignment:
Q  482 tgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    |||||| |||||||||||||| ||||| |||||||||||||    
T  23233760 tgggaccaaaatgaaaatttgtaattagttgagggaccatt 23233800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 99; Significance: 2e-48; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 325 - 534
Target Start/End: Original strand, 109652 - 109861
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||| || ||| | ||||||||||||   || |    
T  109652 agatcaaatggttaaaattaacaaaattaataaggtctacgatggactatttttaaggttggtccaccatatacattt-gaagttaaagttaatagttgg 109750  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||| ||||| |||   ||| ||||| |||||||| |||| |||||||||||||||||| |||| |||||||||| |||||||||||| |||||||||||    
T  109751 gattcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttttattaattgtaggaccaaaatgaaaacttgaaattatttaagggaccattg 109850  T
Q  524 aatcaaataag 534  Q
    |||||||||||    
T  109851 aatcaaataag 109861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 534
Target Start/End: Complemental strand, 108624 - 108513
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| |||  |||||||||||||||||| ||||| |||||||||||||||| |||||  |||||| ||| | ||||||| ||  || |||| |    
T  108624 ggatttatttggcaaatggaggaaaaaatgagggatcaaaacgtacgttttattaattatgggatcaaaatgtaaaatggaaattaattagggaaccaat 108525  T
Q  523 gaatcaaataag 534  Q
    |||| |||||||    
T  108524 gaattaaataag 108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 325 - 530
Target Start/End: Complemental strand, 52801 - 52596
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| ||||| |||||| || |||||||||||||||||| || ||| | | ||||||||||||||||||| || |||   |||||||||||||  |  |    
T  52801 agatcgaacggataaaattaagaaaattaataaggtctaccatagaccatttttaaggttggtccaccatatacatttaa-agttaaagttaactgtcgg 52703  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||| ||| ||||| ||||  ||||||||||||| |||| |||||||||||||||||  |||||||||| ||||||||| ||   |||||||||    
T  52702 gatttatttggcaaacggagaaaaatctgagggaccaaaacgtacattttattaattgtgggatcaaaatgaaaacttgaaattaattagaggaccattg 52603  T
Q  524 aatcaaa 530  Q
    |||||||    
T  52602 aatcaaa 52596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 54086 - 54301
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||| ||| |||| || | |||||||| | |||| | ||||| ||| |||||||||||||||||||||| |  ||||| |||| | |||||     
T  54086 aaaaaatcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaaca 54185  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
     |   |||||||||| ||| ||||||||||  ||||||||||||| | ||||||||||||||||| ||| ||||| |||| |||||||||||||||||||    
T  54186 gtcacgatttatttggcaaacggaggaaaatttgagggaccaaaacgcacgttttattaattgtgcgaccaaaattaaaacttgaaattatttgagggac 54285  T
Q  519 cattgaatcaaataag 534  Q
    || || ||||||||||    
T  54286 caatggatcaaataag 54301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 347 - 520
Target Start/End: Original strand, 2404 - 2577
Alignment:
Q  347 aaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt-tttggagttaaagttaacgatttggatttatttgacaatcggagg 444  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||  || | ||||||||||||||||||  |  | |||||||||  || | ||||    
T  2404 aaaattaataaggtctacgatagaccacttttaaggttggtccaccatt-acatatttggagttaaagttaacagtcggaatttatttggaaaacagagg 2502  T
Q  445 aaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    ||||| | |||||||||||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||||||    
T  2503 aaaaactaagggaccaaaaggtactttttattaattgtgggaccaaaatgaaaa-tggaaattaattgagggacca 2577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 8e-29; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 334 - 498
Target Start/End: Original strand, 23397270 - 23397434
Alignment:
Q  334 ggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttattt 432  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||  |||| ||||||| |||||| |  ||||||||||    
T  23397270 ggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagac-atttgaagttaaatttaacggtcgggatttattt 23397368  T
Q  433 gacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    | ||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||    
T  23397369 ggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 23397434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 423 - 534
Target Start/End: Original strand, 6452516 - 6452627
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||||||||||||||||||  ||| |||||||||||||||| |||||| |||||||||| ||||||||||||  ||||||| |    
T  6452516 ggatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaat 6452615  T
Q  523 gaatcaaataag 534  Q
    | ||||||||||    
T  6452616 ggatcaaataag 6452627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 439 - 534
Target Start/End: Complemental strand, 34023981 - 34023886
Alignment:
Q  439 cggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||| || ||||||||||||||||||||  ||||||||||    
T  34023981 cggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataag 34023886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 427 - 514
Target Start/End: Original strand, 34024073 - 34024160
Alignment:
Q  427 ttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgag 514  Q
    ||||||||||| ||||||||||| ||||||| ||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  34024073 ttatttgacaaacggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaattatttgag 34024160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 325 - 498
Target Start/End: Complemental strand, 29380400 - 29380227
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||  |||| ||||||| |||||| |  |    
T  29380400 agatcgaatggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccatatac-atttgaagttaaaattaacggtcgg 29380302  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    |||||||||| ||| |||| |||||  |||||||| |||| |    |||| ||||||||||||| ||||||||||    
T  29380301 gatttatttggcaaacggaagaaaaggtgagggactaaaacgccatttttgttaattgtgggaccaaaatgaaaa 29380227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 322 - 534
Target Start/End: Original strand, 7311627 - 7311840
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||||||| |||| || | |||||||| | | || | ||||| ||||||||||||||| |||||||||| |  |||||| ||||| |||||     
T  7311627 aaaaaatcaaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccatagacatcatttgga-ttaaacttaact 7311725  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
     |  ||||||||||| |||   ||  ||||| | |||||||||||||||||||| |||||||||||||  |||||||||| || ||||||||| ||||||    
T  7311726 gtgaggatttatttggcaaatagataaaaaagtaagggaccaaaaggtacgttt-attaattgtgggatcaaaatgaaaacttaaaattatttaagggac 7311824  T
Q  519 cattgaatcaaataag 534  Q
    |||||||| |||||||    
T  7311825 cattgaattaaataag 7311840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 404 - 520
Target Start/End: Complemental strand, 232305 - 232190
Alignment:
Q  404 gagttaaagttaacgatttgg-atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    ||||||||||||||  ||||| ||||||||| ||| ||||||||||| |||||||| |||| ||  |||||||||||| |||||| |||||||||| |||    
T  232305 gagttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaacgt--gttttattaattatgggaccaaaatgaaaaattg 232208  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| ||||||||    
T  232207 aaattatttaagggacca 232190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 325 - 498
Target Start/End: Original strand, 17839046 - 17839219
Alignment:
Q  325 agatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg 423  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||| ||| ||||||||  ||||||||  ||  |||| ||||||| |||||| |  |    
T  17839046 agatcgaatggttaaaattaacaaaattaataaggtctacaatggactacttttaaggttaatccaccatctac-atttgaagttaaaattaacggtcgg 17839144  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    |||||||||| ||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||    
T  17839145 gatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 17839219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 348 - 508
Target Start/End: Complemental strand, 5186753 - 5186594
Alignment:
Q  348 aaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaa 447  Q
    |||||||||||||||||||| |||  | |||||||| || |||||||||  ||| | |||||||||||||| |  ||||||||||| ||| |||||||||    
T  5186753 aaattaataaggtctacgattgaccattttaaggtttgttcaccatagatattt-gaagttaaagttaacggtcgggatttatttggcaaacggaggaaa 5186655  T
Q  448 aaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    | |||| |||  |||| ||   |||||||||||||| ||| ||||||||||  ||||||||    
T  5186654 agatgatggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaatta 5186594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 534
Target Start/End: Original strand, 15730036 - 15730146
Alignment:
Q  425 atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgtttt-attaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    ||||||||  ||| |||| |||||| ||||||||||||| |||  |||| |||||||||||||| |||||||||| | ||||||| ||||||||||| ||    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  524 aatcaaataag 534  Q
    |||| ||||||    
T  15730136 aatctaataag 15730146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 6452395 - 6452307
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    ||||||||||| ||| ||||||||||| |||||||| |||| |||| ||||||||||| | |||| |||| ||||| ||||||||||||    
T  6452395 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaattattt 6452307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 508
Target Start/End: Original strand, 29381632 - 29381820
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaccatagacgt--tttggagttaaagttaacg 418  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | |||| ||||||||||||| |||||||| |||| |  ||||| |||||| |||||     
T  29381632 aaaaaatcaaacggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaact 29381731  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
     || |||||||||||  || |||||||||| |||| |||| |||| ||   |||||||||||||||||  |||||||||||  |||||||    
T  29381732 gtt-ggatttatttggtaaacggaggaaaagatgaaggactaaaacgtcatttttattaattgtgggatcaaaatgaaaataagaaatta 29381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 424 - 536
Target Start/End: Original strand, 27967055 - 27967167
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    ||||| |||| ||| || |||||||| | | ||| ||||| ||| ||| ||||||||||||||  |||||||||| | | ||||||||| ||||||||||    
T  27967055 gatttttttggcaaacgtaggaaaaattaaaggatcaaaatgtatgttctattaattgtgggatcaaaatgaaaactaggaattatttgggggaccattg 27967154  T
Q  524 aatcaaataagtc 536  Q
     ||||||||||||    
T  27967155 gatcaaataagtc 27967167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 536
Target Start/End: Original strand, 27082168 - 27082263
Alignment:
Q  442 aggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatt-tgagggaccattgaatcaaataagtc 536  Q
    |||||||| ||||||||  |||  ||| |||||||||||||||||| |||||||||||| |||||||||  | |||||||||| ||| ||||||||    
T  27082168 aggaaaaagtgagggacttaaacatactttttattaattgtgggaccaaaatgaaaattcgaaattattcagggggaccattggatcgaataagtc 27082263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 498
Target Start/End: Complemental strand, 23392464 - 23392250
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaaaacaaaag-atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttg 384  Q
    ||||| ||||||||  |||| | ||||||||||| ||||  ||||||||||| |||| || | |||||||| | |||| | ||||| ||| |||||||||    
T  23392464 tagacttgcataatctaatggttatcttttaaaaaaaaaatatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttg 23392365  T
Q  385 gtccaccatag-acgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtg 483  Q
     |||||| ||| |   ||||| |||||| |||||  || ||||||||||| ||| ||||||||||  ||||||||  ||| |    ||||||||||||||    
T  23392364 atccaccttagcatcatttggggttaaacttaacatttaggatttatttggcaaacggaggaaaaggtgagggacttaaacgccatttttattaattgtg 23392265  T
Q  484 ggactaaaatgaaaa 498  Q
    |||| ||||||||||    
T  23392264 ggaccaaaatgaaaa 23392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 520
Target Start/End: Original strand, 233554 - 233666
Alignment:
Q  404 gagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttg 502  Q
    |||||||||||||| ||||| |||||||||| |||      ||||||||||||||| |||| ||   ||||||||||| |||||| |||||||||| |||    
T  233554 gagttaaagttaacaatttgagatttatttggcaaa-----gaaaaaatgagggactaaaacgtgttttttattaattatgggaccaaaatgaaaaattg 233648  T
Q  503 aaattatttgagggacca 520  Q
    ||||||||| | ||||||    
T  233649 aaattatttaaaggacca 233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 511
Target Start/End: Complemental strand, 12669886 - 12669746
Alignment:
Q  371 cactcttaaggttggtccaccatagacgttttggagttaaagttaacgatttg-gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacg 469  Q
    |||||||||||||||||||||||| || |||  | ||||||||||||  || | |||||||||  ||| ||||||||||| ||| |||| ||||  |  |    
T  12669886 cactcttaaggttggtccaccatacacatttgag-gttaaagttaacagttagagatttatttagcaaacggaggaaaaagtgacggactaaaacttgag 12669788  T
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaattattt 511  Q
    |||||||||||||| ||| ||||| ||||||| | |||||||    
T  12669787 ttttattaattgtgagaccaaaataaaaatttaatattattt 12669746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 424 - 533
Target Start/End: Complemental strand, 27081034 - 27080925
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccattg 523  Q
    |||||||||  ||| ||||| ||||| ||||||||  ||| |||  |||||||||||||  ||| |||||||||| | |||||||||| ||||| |||||    
T  27081034 gatttatttcgcaaacggagaaaaaagtgagggacttaaatgtaaattttattaattgtaagaccaaaatgaaaactcgaaattatttaagggatcattg 27080935  T
Q  524 aatcaaataa 533  Q
     |||||||||    
T  27080934 gatcaaataa 27080925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 498
Target Start/End: Complemental strand, 17837825 - 17837652
Alignment:
Q  327 atcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgt--tttggagttaaagttaacgatttg 423  Q
    ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||| ||| ||||||||||||| |  ||||| |||||| |||||  || |    
T  17837825 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgtt-g 17837727  T
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 498  Q
    ||||||||||  || |||| ||||| ||||||||| |||| |    ||||||||||||||| || ||||||||||    
T  17837726 gatttatttggtaaacggaagaaaagatgagggactaaaacgccatttttattaattgtggaaccaaaatgaaaa 17837652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 376 - 534
Target Start/End: Complemental strand, 7310433 - 7310276
Alignment:
Q  376 ttaaggttggtccaccatagacgttttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttat 475  Q
    ||||||||||| |||||||||| ||| ||||||||| |||||      ||||||||||  || ||||| ||||  ||| ||||  |||  ||||||||||    
T  7310433 ttaaggttggttcaccatagacattt-ggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggacttaaacatacgttttat 7310335  T
Q  476 taattgtgggactaaaatgaaaatttgaaattatttgagggaccattgaatcaaataag 534  Q
    ||||| |||||| |||||||||| || ||||||||| | |||||  || ||||||||||    
T  7310334 taattatgggaccaaaatgaaaacttaaaattatttaaaggaccgatggatcaaataag 7310276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 6701490 - 6701406
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||| ||| ||||||||||  |||||||| ||||      |||||||||||||||||| ||||||||||| ||||||||    
T  6701490 gatttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaatta 6701406  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 508
Target Start/End: Original strand, 6702853 - 6702960
Alignment:
Q  400 tttggagttaaagttaacgatttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaat 499  Q
    |||||||||||| |||||  |  ||||||||||| ||| ||||||||||  |||||||  ||| |  |  |||||||||||||||||| |||||||||||    
T  6702853 tttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggataaaacgccat-ttttattaattgtgggaccaaaatgaaaat 6702951  T
Q  500 ttgaaatta 508  Q
     ||||||||    
T  6702952 atgaaatta 6702960  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 508
Target Start/End: Original strand, 2687976 - 2688014
Alignment:
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  2687976 ttttattaattgtgggactaaaatgaaaacatgaaatta 2688014  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 508
Target Start/End: Original strand, 18346802 - 18346840
Alignment:
Q  470 ttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  18346802 ttttattaattgtgggaccaaaatgaaaatatgaaatta 18346840  T

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Target: scaffold0201 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 323 - 534
Target Start/End: Complemental strand, 21339 - 21127
Alignment:
Q  323 aaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaac---g 418  Q
    ||||||||||||||||||||  | ||||||||| | ||||| | ||||| ||||| |||||||||||||||||||| |||  | |||||| |||||   |    
T  21339 aaagatcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccatagacatttgtg-gttaaacttaacaacg 21241  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
    | |  |||||||||| ||| ||||||||||| | ||||| |||||||||| ||||||||||| ||||||||||||||||| |  |||||| ||||||| |    
T  21240 aat--gatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaaatgaaaattaattgaggggc 21143  T
Q  519 cattgaatcaaataag 534  Q
    || || ||| ||||||    
T  21142 caatggatctaataag 21127  T

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Target: scaffold0118 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 527
Target Start/End: Original strand, 43476 - 43684
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgtt--ttggagttaaagttaacg 418  Q
    |||| ||||||||||| |||| || | |||||||| | |||| | ||||| ||||||||| |||||||||||||||| |   |||| |||||| |||||     
T  43476 aaaaaatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaacc 43575  T
Q  419 atttggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggac 518  Q
     |  ||| ||||||| ||| ||||||||||| ||||||||  |||  ||||||||||||||| |||||| ||||| |||| || ||||||||||||||||    
T  43576 gtcaggacttatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattatttgagggac 43675  T
Q  519 cattgaatc 527  Q
    || ||||||    
T  43676 caatgaatc 43684  T

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Target: scaffold2071 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 556 - 652
Alignment:
Q  294 gcataattcaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtcca 389  Q
    ||||||| ||||| ||||||||| ||| || ||||||||||||| |||| || ||| ||||||||||||| | |||| |||||||||||||||||||    
T  556 gcataatccaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtcca 652  T

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Target: scaffold0078 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 533
Target Start/End: Complemental strand, 18923 - 18813
Alignment:
Q  423 ggatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggaccatt 522  Q
    ||||||||||| ||| ||||| ||||| |||||||| ||||  || |||||||||| | |||||| |||||||||| || ||||||||| | ||| || |    
T  18923 ggatttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattatttaaaggatcaat 18824  T
Q  523 gaatcaaataa 533  Q
    | |||||||||    
T  18823 ggatcaaataa 18813  T

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Target: scaffold0219 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 8083 - 8189
Alignment:
Q  311 tcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggacactcttaaggttggtccaccatagacgttttggagttaa 410  Q
    |||||||||| |||  ||||||||||| |||| || | ||||||||   |||| ||||||| |||||||||||| ||||||||||||  ||||| |||||    
T  8083 tcttttaaaaaaaacaatcaaacggtttaaattaaaataattaatataatctatgatggaccctcttaaggttgatccaccatagac-atttggggttaa 8181  T
Q  411 agttaacg 418  Q
    | ||||||    
T  8182 aattaacg 8189  T

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Target: scaffold1251 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 520
Target Start/End: Original strand, 1118 - 1187
Alignment:
Q  451 tgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||||||||||||  |  ||||||||| || |||||| |||||||||| | |||||||||||||||||||    
T  1118 tgagggaccaaaacatgagttttattacttatgggaccaaaatgaaaactggaaattatttgagggacca 1187  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 433
Target Start/End: Complemental strand, 32822 - 32672
Alignment:
Q  287 tagacatgcataattcaatgatcatcttttaa--aacaaaagatcaaacggttaaaatgaacaaaat--taataaggtctacgatggac-actcttaagg 381  Q
    ||||||||||| ||  |||| || ||||||||  || |||||||||||||||| |||| || ||||   ||||| | |||| ||||||| |||| |||||    
T  32822 tagacatgcatgatctaatggtcctcttttaataaaaaaaagatcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaagg 32723  T
Q  382 ttggtccaccatagacgttttggagttaaagttaacgatttggatttatttg 433  Q
    |||||||||||||||| |||  | ||||||||||||  || |||||||||||    
T  32722 ttggtccaccatagacatttaag-gttaaagttaacagttaggatttatttg 32672  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 508
Target Start/End: Complemental strand, 127646 - 127459
Alignment:
Q  322 aaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaccatagacgttttggagttaaagttaacgat 420  Q
    |||| ||| ||||||| |||| || || ||||||| | |||| | ||||| ||||||||||||| | |||||||||| |||  | ||||||||||||  |    
T  127646 aaaaaatctaacggtttaaattaaaaacattaataggatctatggtggaccactcttaaggttgtttcaccatagacatttgag-gttaaagttaactgt 127548  T
Q  421 ttgg-atttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaatta 508  Q
      || |||||||||||   |||||| ||| ||||||||||||||  |  ||||||||| || |||||| |||| ||||| |||||||||    
T  127547 cagggatttatttgaccgacggaggcaaacatgagggaccaaaacatgagttttattagttatgggaccaaaacgaaaacttgaaatta 127459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 424 - 520
Target Start/End: Complemental strand, 61961 - 61865
Alignment:
Q  424 gatttatttgacaatcggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaatttgaaattatttgagggacca 520  Q
    |||||||||| ||| |||| ||||| ||||||||| |||| |    ||||||||||| || ||| ||||||||||  |||||||||||  |||||||    
T  61961 gatttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaattatttaggggacca 61865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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