View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18668_high_11 (Length: 419)
Name: NF18668_high_11
Description: NF18668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18668_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 6 - 403
Target Start/End: Complemental strand, 40409711 - 40409314
Alignment:
| Q |
6 |
atggggcaatcattggctaatacatttgatgttagccactgaaaagtacgtatgtataaaaaagcagagaaatggggaatcatatctaggtctaggtggt |
105 |
Q |
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| T |
40409711 |
atggggcaatcattggctaatacatttgatgttagccactgaaaagtacgtatgtataaaaaagcagagaaatggggaatcatatctaggtctaggtggt |
40409612 |
T |
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| Q |
106 |
cgaaattggcacccccctatgcccatgtaataaacattgatcatttgattgacattgatataaagcgcgaattaattaagaagacagagttgatatggat |
205 |
Q |
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| T |
40409611 |
cgaaattggcacccccccatgcccatgtaataaacattgatcatttgattgacattgatataaagcgcgaattaattaagaagacagagttgatatggat |
40409512 |
T |
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| Q |
206 |
acaagttgacaaatactctaatgaggttttaggagagtgaatgattttaatattatcctaatggttttatggatacaaattgaataaaagtaagatgaat |
305 |
Q |
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| T |
40409511 |
acaagttgacaaatactctaatgaggttttaggagagtgaatgattttaatattatcctaatggttttatggatacaaattgaataaaagtaagatgaat |
40409412 |
T |
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| Q |
306 |
ctacatttcgtgtatgatatctcaatcaattttaaaggttgtaaacgttcctattaatcctttagtgttgttttgatgaccttatctttgagccgact |
403 |
Q |
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| T |
40409411 |
ctacatttcgtgtatgatatctcaatcaattttaaaggttgtaagcgttcctattaatcatttagtgttgttttgatgaccttatctttgagccgact |
40409314 |
T |
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