View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18674_high_21 (Length: 468)

Name: NF18674_high_21
Description: NF18674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18674_high_21
NF18674_high_21
[»] chr2 (23 HSPs)
chr2 (37-419)||(24157817-24158200)
chr2 (21-241)||(21846109-21846337)
chr2 (23-456)||(24440455-24440868)
chr2 (28-273)||(22383448-22383693)
chr2 (105-246)||(20568190-20568330)
chr2 (291-411)||(21846335-21846456)
chr2 (68-235)||(10896347-10896514)
chr2 (60-183)||(25918653-25918776)
chr2 (61-179)||(21911046-21911163)
chr2 (123-193)||(24844206-24844276)
chr2 (60-182)||(15668523-15668645)
chr2 (107-186)||(19320374-19320453)
chr2 (107-218)||(24302898-24303008)
chr2 (350-411)||(20569763-20569824)
chr2 (113-182)||(33705980-33706049)
chr2 (359-428)||(24302674-24302743)
chr2 (126-169)||(14793980-14794023)
chr2 (107-153)||(19643685-19643731)
chr2 (350-411)||(10896183-10896244)
chr2 (360-411)||(18430674-18430725)
chr2 (114-161)||(22683493-22683540)
chr2 (360-410)||(38781694-38781744)
chr2 (360-412)||(30667303-30667355)
[»] chr5 (17 HSPs)
chr5 (22-401)||(26119615-26120002)
chr5 (67-430)||(23589731-23590106)
chr5 (37-236)||(20567790-20567988)
chr5 (32-288)||(20969180-20969434)
chr5 (38-249)||(13692408-13692617)
chr5 (61-246)||(31588958-31589142)
chr5 (32-183)||(34638431-34638581)
chr5 (63-218)||(27057329-27057483)
chr5 (38-216)||(39798857-39799034)
chr5 (48-174)||(17262750-17262875)
chr5 (115-183)||(20237391-20237459)
chr5 (107-226)||(2152871-2152990)
chr5 (61-182)||(27276153-27276276)
chr5 (104-181)||(22586011-22586088)
chr5 (112-183)||(34637578-34637649)
chr5 (124-176)||(16607588-16607640)
chr5 (360-412)||(23412776-23412828)
[»] chr7 (23 HSPs)
chr7 (21-418)||(16307519-16307913)
chr7 (40-347)||(9064035-9064349)
chr7 (21-236)||(13172323-13172546)
chr7 (21-215)||(18047827-18048020)
chr7 (31-184)||(5035357-5035509)
chr7 (60-183)||(16105018-16105141)
chr7 (102-235)||(7487878-7488010)
chr7 (61-249)||(18361540-18361727)
chr7 (350-418)||(13172181-13172249)
chr7 (350-417)||(14304177-14304244)
chr7 (104-206)||(16412048-16412150)
chr7 (113-179)||(2501095-2501161)
chr7 (350-411)||(7487677-7487739)
chr7 (112-174)||(16472743-16472805)
chr7 (113-174)||(14114101-14114162)
chr7 (113-174)||(14423751-14423812)
chr7 (113-182)||(15871121-15871190)
chr7 (351-428)||(16412318-16412395)
chr7 (360-412)||(48800431-48800483)
chr7 (360-410)||(13880906-13880956)
chr7 (137-179)||(16412812-16412854)
chr7 (113-182)||(11572278-11572347)
chr7 (360-412)||(12366540-12366592)
[»] chr1 (24 HSPs)
chr1 (59-419)||(16869976-16870334)
chr1 (21-294)||(18129853-18130124)
chr1 (69-347)||(9346778-9347052)
chr1 (31-320)||(18516976-18517265)
chr1 (67-257)||(23054388-23054577)
chr1 (64-287)||(26279900-26280121)
chr1 (38-185)||(21683135-21683280)
chr1 (70-236)||(20109847-20110003)
chr1 (80-186)||(1090483-1090590)
chr1 (350-428)||(23054629-23054707)
chr1 (108-165)||(16478690-16478747)
chr1 (350-411)||(20109685-20109746)
chr1 (349-419)||(9658974-9659044)
chr1 (117-179)||(2819274-2819336)
chr1 (350-411)||(24227699-24227759)
chr1 (102-183)||(26703611-26703692)
chr1 (360-416)||(17024687-17024743)
chr1 (117-210)||(17018650-17018741)
chr1 (335-427)||(18129737-18129827)
chr1 (137-181)||(24227929-24227973)
chr1 (359-402)||(1090272-1090315)
chr1 (117-184)||(20909478-20909545)
chr1 (360-410)||(16235022-16235072)
chr1 (363-411)||(18896298-18896346)
[»] scaffold0522 (2 HSPs)
scaffold0522 (34-408)||(4016-4397)
scaffold0522 (34-408)||(11299-11680)
[»] chr3 (47 HSPs)
chr3 (21-320)||(8728882-8729181)
chr3 (21-320)||(9080769-9081068)
chr3 (21-427)||(16882254-16882669)
chr3 (69-275)||(16794213-16794418)
chr3 (26-277)||(20418203-20418461)
chr3 (28-271)||(22766470-22766708)
chr3 (22-226)||(4243151-4243353)
chr3 (61-260)||(19197823-19198022)
chr3 (167-427)||(7494387-7494646)
chr3 (70-236)||(10851832-10851997)
chr3 (107-320)||(27374832-27375050)
chr3 (61-220)||(13699372-13699530)
chr3 (38-187)||(315077-315224)
chr3 (167-287)||(7477696-7477816)
chr3 (61-241)||(13653930-13654108)
chr3 (61-225)||(21317405-21317568)
chr3 (68-226)||(14077330-14077487)
chr3 (349-430)||(8728796-8728877)
chr3 (349-430)||(9080683-9080764)
chr3 (114-235)||(17697676-17697797)
chr3 (39-213)||(14072682-14072855)
chr3 (269-416)||(4242990-4243147)
chr3 (60-183)||(16305184-16305307)
chr3 (102-249)||(3087591-3087738)
chr3 (65-183)||(11078665-11078783)
chr3 (61-193)||(14007585-14007717)
chr3 (349-408)||(14072992-14073051)
chr3 (107-182)||(27851603-27851678)
chr3 (61-174)||(17762134-17762248)
chr3 (61-174)||(19063454-19063568)
chr3 (350-411)||(10852067-10852128)
chr3 (352-411)||(17697868-17697927)
chr3 (111-164)||(15647813-15647866)
chr3 (112-164)||(15552187-15552239)
chr3 (360-412)||(15903518-15903570)
chr3 (350-433)||(20418478-20418559)
chr3 (360-412)||(49642567-49642619)
chr3 (116-183)||(13932004-13932071)
chr3 (351-409)||(16305004-16305060)
chr3 (140-179)||(18459227-18459266)
chr3 (368-411)||(19197657-19197700)
chr3 (360-410)||(13824353-13824403)
chr3 (327-420)||(7477825-7477917)
chr3 (107-164)||(11513898-11513955)
chr3 (20-73)||(16879981-16880034)
chr3 (360-412)||(22803889-22803941)
chr3 (360-412)||(37467621-37467673)
[»] chr4 (19 HSPs)
chr4 (21-371)||(13027739-13028099)
chr4 (21-427)||(16324256-16324667)
chr4 (21-347)||(14356949-14357282)
chr4 (61-239)||(20570925-20571102)
chr4 (41-241)||(2651789-2651987)
chr4 (32-214)||(18774028-18774209)
chr4 (38-241)||(14902385-14902584)
chr4 (61-182)||(20577293-20577414)
chr4 (63-183)||(18394543-18394665)
chr4 (108-163)||(17812296-17812351)
chr4 (21-138)||(19889020-19889145)
chr4 (360-411)||(11901529-11901580)
chr4 (351-409)||(10250126-10250184)
chr4 (358-411)||(12810941-12810994)
chr4 (246-287)||(21350476-21350517)
chr4 (360-411)||(17540732-17540783)
chr4 (210-279)||(18776147-18776216)
chr4 (360-416)||(6641994-6642050)
chr4 (360-412)||(16632752-16632804)
[»] chr6 (44 HSPs)
chr6 (21-429)||(23005815-23006229)
chr6 (21-429)||(23782137-23782551)
chr6 (67-429)||(18171793-18172160)
chr6 (21-429)||(24718528-24718924)
chr6 (21-294)||(24728465-24728728)
chr6 (38-294)||(10704462-10704706)
chr6 (25-226)||(19875804-19876013)
chr6 (25-235)||(16462610-16462828)
chr6 (51-233)||(32335826-32336007)
chr6 (158-287)||(14325283-14325413)
chr6 (158-287)||(14418293-14418423)
chr6 (95-233)||(17445620-17445758)
chr6 (38-226)||(24398652-24398838)
chr6 (51-347)||(13145137-13145433)
chr6 (20-143)||(17867539-17867661)
chr6 (20-143)||(17877322-17877444)
chr6 (67-183)||(18026778-18026895)
chr6 (61-218)||(21035011-21035167)
chr6 (349-429)||(24728327-24728407)
chr6 (69-247)||(31127290-31127467)
chr6 (252-425)||(9192688-9192871)
chr6 (38-308)||(23231170-23231443)
chr6 (350-429)||(17445464-17445544)
chr6 (106-236)||(7812072-7812202)
chr6 (61-174)||(30451556-30451669)
chr6 (350-411)||(7812304-7812365)
chr6 (104-193)||(25930533-25930622)
chr6 (332-404)||(14325149-14325221)
chr6 (332-404)||(14418159-14418231)
chr6 (349-411)||(16462431-16462493)
chr6 (350-408)||(25592828-25592886)
chr6 (350-426)||(32336081-32336155)
chr6 (61-164)||(26185727-26185829)
chr6 (358-409)||(21035312-21035363)
chr6 (117-219)||(23298019-23298120)
chr6 (118-183)||(25595953-25596018)
chr6 (351-411)||(17928108-17928167)
chr6 (351-411)||(23298251-23298310)
chr6 (360-411)||(14100251-14100302)
chr6 (117-176)||(19625881-19625940)
chr6 (349-408)||(19876095-19876154)
chr6 (115-193)||(12348165-12348243)
chr6 (351-428)||(12348426-12348503)
chr6 (117-213)||(17927862-17927957)
[»] chr8 (13 HSPs)
chr8 (21-418)||(17916611-17917015)
chr8 (71-236)||(18558039-18558203)
chr8 (102-269)||(12193951-12194118)
chr8 (102-269)||(12438379-12438546)
chr8 (350-429)||(26833350-26833429)
chr8 (61-183)||(19505463-19505584)
chr8 (123-183)||(12541699-12541759)
chr8 (117-176)||(18772685-18772744)
chr8 (350-411)||(23772669-23772729)
chr8 (123-241)||(1208590-1208708)
chr8 (137-181)||(23772455-23772499)
chr8 (360-412)||(17267783-17267835)
chr8 (360-416)||(19707814-19707870)
[»] scaffold0772 (2 HSPs)
scaffold0772 (67-441)||(609-969)
scaffold0772 (21-73)||(972-1024)
[»] scaffold0490 (1 HSPs)
scaffold0490 (102-408)||(7379-7685)
[»] scaffold0364 (2 HSPs)
scaffold0364 (31-430)||(10145-10540)
scaffold0364 (360-416)||(6309-6365)
[»] scaffold0311 (1 HSPs)
scaffold0311 (31-264)||(20045-20285)
[»] scaffold0011 (2 HSPs)
scaffold0011 (67-236)||(59579-59746)
scaffold0011 (349-406)||(59831-59888)
[»] scaffold1026 (1 HSPs)
scaffold1026 (70-287)||(2991-3208)
[»] scaffold0074 (1 HSPs)
scaffold0074 (60-226)||(31638-31803)
[»] scaffold0758 (1 HSPs)
scaffold0758 (61-249)||(4284-4471)
[»] scaffold0040 (2 HSPs)
scaffold0040 (41-249)||(3930-4136)
scaffold0040 (360-412)||(1244-1296)
[»] scaffold0002 (1 HSPs)
scaffold0002 (57-246)||(112218-112403)
[»] scaffold0622 (2 HSPs)
scaffold0622 (61-228)||(3332-3498)
scaffold0622 (117-184)||(2730-2797)
[»] scaffold0351 (1 HSPs)
scaffold0351 (57-185)||(9228-9352)
[»] scaffold0037 (1 HSPs)
scaffold0037 (162-233)||(87020-87091)
[»] scaffold0683 (1 HSPs)
scaffold0683 (102-168)||(431-497)
[»] scaffold0092 (1 HSPs)
scaffold0092 (61-160)||(8098-8198)
[»] scaffold0043 (1 HSPs)
scaffold0043 (59-154)||(1841-1936)
[»] scaffold0498 (1 HSPs)
scaffold0498 (108-183)||(3280-3355)
[»] scaffold0388 (2 HSPs)
scaffold0388 (108-183)||(5439-5514)
scaffold0388 (350-427)||(4720-4797)
[»] scaffold1107 (1 HSPs)
scaffold1107 (107-160)||(2357-2410)
[»] scaffold0035 (1 HSPs)
scaffold0035 (117-210)||(29867-29958)
[»] scaffold0067 (1 HSPs)
scaffold0067 (107-174)||(16403-16470)
[»] scaffold0003 (4 HSPs)
scaffold0003 (104-206)||(760-862)
scaffold0003 (124-179)||(416028-416083)
scaffold0003 (351-428)||(1030-1107)
scaffold0003 (137-179)||(1524-1566)
[»] scaffold0916 (1 HSPs)
scaffold0916 (351-428)||(2369-2446)
[»] scaffold0201 (1 HSPs)
scaffold0201 (350-411)||(19349-19410)
[»] scaffold0081 (1 HSPs)
scaffold0081 (364-412)||(40968-41016)
[»] scaffold0009 (1 HSPs)
scaffold0009 (359-402)||(269042-269085)
[»] scaffold0056 (1 HSPs)
scaffold0056 (378-411)||(35923-35956)
[»] scaffold0161 (1 HSPs)
scaffold0161 (360-408)||(9880-9928)
[»] scaffold0022 (3 HSPs)
scaffold0022 (360-412)||(39731-39783)
scaffold0022 (360-412)||(137791-137843)
scaffold0022 (360-416)||(159387-159443)


Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-125; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 37 - 419
Target Start/End: Original strand, 24157817 - 24158200
Alignment:
Q  37 tcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgt-tgcgctcttcagtggataagtatccaatgccttc 135  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||   | |||||||||||||||||| |||||||| ||||    
T  24157817 tcttgtactactgcagacatgaggagtggagtagtggttgtgcaattgtactatatccttttttcctacgctcttcagtggataagcatccaatgtcttc 24157916  T
Q  136 taattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttca 235  Q
    |||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  24157917 taattcctctaaaatagtcgttgctccaggcttccattccttctacaatgatatgcattcagaataacaacttttaactaacttcagcttccagtcttca 24158016  T
Q  236 gactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttca 335  Q
    |||||| |||||||| ||||| ||||| |||||||| |||||||||||||||  |||| |||||||| |||||||||| |||| | ||||||||| ||||    
T  24158017 gactctgatgaactccagcttttgaggttcttcagattctctgatgacgtcagcttctagtagacagcttctgatagtcttcaaacgctctttgtcttca 24158116  T
Q  336 gactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaa 419  Q
    | |||||||||||||||||||| | ||| |||||||| |||||||  |||| |||||||||||||| ||||||||| |||||||    
T  24158117 ggctctgtcttgaatcttgcaaaataagtttccttttcgtaaatttcattgctctcatttgttctttcagaacctatacttgaa 24158200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 21846109 - 21846337
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagta---------gtggttgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||         |||||||| ||||| ||||||||||||||  ||||||| ||     
T  21846109 gtagtcaaaactgttatcttgtactactgcagacatgaggagtggagtaatggaggtagtggttgtacaattgtactatgtccttttc-ttgcgctttta 21846207  T
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattta 211  Q
    |||||||| | ||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||| ||||    
T  21846208 agtggatatgcatcaaatgccttctaattcctttgaaatagtcgttgctctaggcttccattccttctgcaatgatatgcattcagaataacaactttta 21846307  T
Q  212 actaacttcagcttccagtcttcagactct 241  Q
    ||||||||||||||||||||||||||||||    
T  21846308 actaacttcagcttccagtcttcagactct 21846337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 23 - 456
Target Start/End: Complemental strand, 24440868 - 24440455
Alignment:
Q  23 agtcacagctgttatcttgtactactgcagacatgaggagtggagtagtgg---------ttgttcaattatactatgtcctttttgttgcgctcttcag 113  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||||         |||| ||||| ||||||||||||||   ||||||||||||    
T  24440868 agtcacagctgtaatcttgtactattgcagacatgaagagtggagtagtggaggtagtggttgtacaattgtactatgtcctttta--tgcgctcttcag 24440771  T
Q  114 tggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaac 213  Q
    |||||||  ||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||||| |  |||| | ||||||| | ||||    
T  24440770 tggataaacatccaatgccttctaattcctctgaaatagcagttgctccaggcttctattccttctgcaatcatacgtgttcagattaacaacttctaac 24440671  T
Q  214 taacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagt 313  Q
     |||||||  ||| |||||||||||||| |||||||| | ||                   |||||||||||||  ||||||||||||| ||||||| ||    
T  24440670 aaacttcatgttctagtcttcagactctgatgaactccatct-------------------tctgatgacgtcagcttctggtagacagcttctgatggt 24440590  T
Q  314 tttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaa 413  Q
     |||||| ||||| | | ||| ||||||       ||||||||| ||||||||||||||||||||||| |||| |||| |||||||||| |||||||| |    
T  24440589 cttcagacgctctct-tcttctgactct-------atcttgcaacacaagcttcctttttgtaaattccattgctctcgtttgttcttctagaacctata 24440498  T
Q  414 cttgaactaaagacatacaaccttttatctgtgctcctcctca 456  Q
    ||||  ||||||||||||||| |||| ||| || |||| ||||    
T  24440497 cttgctctaaagacatacaactttttgtctatggtcctgctca 24440455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 273
Target Start/End: Original strand, 22383448 - 22383693
Alignment:
Q  28 cagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatcc 126  Q
    |||||||  |||||||||| |||| |||||| |||||||||||||||||| ||| |||||||| ||||||||| | |||||||| |||||||||| ||||    
T  22383448 cagctgtattcttgtactattgcacacatgaagagtggagtagtggttgtacaaatatactattgtcctttttat-gcgctctttagtggataagcatcc 22383546  T
Q  127 aatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttc 226  Q
    ||||||||||||||||||| |||||| ||||||||  ||||||||||| |||| |||| |||||  |||| ||||||||| |||||||||||  |||||     
T  22383547 aatgccttctaattcctctaaaatagccgttgctcacggcttccattccttctacaatgatatgtcttcagaataacaacttttaactaactctagcttg 22383646  T
Q  227 cagtcttcagactctcatgaactctagcttctgaggctcttcagact 273  Q
    ||| |||||||||||  ||| || |||||||||| | ||||||||||    
T  22383647 cagccttcagactctgttgacctttagcttctgatgatcttcagact 22383693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 20568190 - 20568330
Alignment:
Q  105 gctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataaca 204  Q
    |||||| || ||||||| ||||||||||||||||||||| | |||||| |||||||||||||||| |||| |||| |||| || |||| ||| ||| |||    
T  20568190 gctctttagcggataagcatccaatgccttctaattcctataaaatagccgttgctccaggcttctattccttctacaatgatgtgcaatca-aatgaca 20568288  T
Q  205 acatttaactaacttcagcttccagtcttcagactctcatga 246  Q
    ||||||||||||||||||||||||||||||||| ||| ||||    
T  20568289 acatttaactaacttcagcttccagtcttcagattctgatga 20568330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 291 - 411
Target Start/End: Original strand, 21846335 - 21846456
Alignment:
Q  291 tctggtagacagtttctgatagtt-ttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatc 389  Q
    |||||||||||| || |||||||| |||||| ||||||||| |||||||| |||||||||||| | ||  ||||||||||||||||||||| ||||| ||    
T  21846335 tctggtagacagcttttgatagttcttcagacgctctttgtcttcagactatgtcttgaatctagaaactcaagcttcctttttgtaaattttattgctc 21846434  T
Q  390 tcatttgttcttccagaaccta 411  Q
    |||||||||||| |||||||||    
T  21846435 tcatttgttctttcagaaccta 21846456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 235
Target Start/End: Complemental strand, 10896514 - 10896347
Alignment:
Q  68 tagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggc 166  Q
    |||||||||| ||||| |||||| ||||||||  |  |||||||| | | ||||| ||||||||||||||||||| |||||||||| ||||||||||||     
T  10896514 tagtggttgtacaattgtactattgtccttttc-taacgctcttcggcgaataagcatccaatgccttctaattcttctgaaatagccgttgctccagga 10896416  T
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttca 235  Q
    ||| ||||||||| |||| || || | ||| ||  ||| | |||||||||||||| |||||| ||||||    
T  10896415 ttctattctttctacaatgatgtgtaatcaaaaagacagcttttaactaacttcaacttccaatcttca 10896347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 183
Target Start/End: Original strand, 25918653 - 25918776
Alignment:
Q  60 gagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttg 158  Q
    |||||||||||||||||| ||||| |||||| |||||| |  | |||||||| |||||||||| |||||||||||||||||||||||||  ||| | |||    
T  25918653 gagtggagtagtggttgtacaattgtactattgtccttctact-gcgctctttagtggataagcatccaatgccttctaattcctctgatgtagacattg 25918751  T
Q  159 ctccaggcttccattctttctgcaa 183  Q
    |||||| |||| |||| ||||||||    
T  25918752 ctccagacttctattccttctgcaa 25918776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 21911163 - 21911046
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    |||||| | |||||||| ||||| ||||||||||||||  | || ||||| |||||||||| ||| |||||||||||||| |||| |||| |||||||||    
T  21911163 agtggatttgtggttgtacaattgtactatgtccttttcct-gcactctttagtggataagcatcaaatgccttctaatttctctaaaatcgtcgttgct 21911065  T
Q  161 ccaggcttccattctttct 179  Q
    ||||||||| |||| ||||    
T  21911064 ccaggcttctattccttct 21911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 24844206 - 24844276
Alignment:
Q  123 atccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcat 193  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  24844206 atccaatgccttccaactcctctgaaatagtcgttgctccaggcttctattctttctgcaatgataggcat 24844276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 15668645 - 15668523
Alignment:
Q  60 gagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttg 158  Q
    |||||||||||||| ||| ||||| |||||| ||||| ||| || || ||||||||||||||| |||||||||||| |||||| |||||||||| |||||    
T  15668645 gagtggagtagtgggtgtacaattgtactattgtcctatttctt-cggtcttcagtggataagcatccaatgccttttaattcatctgaaatagccgttg 15668547  T
Q  159 ctccaggcttccattctttctgca 182  Q
    || || ||||  |||| |||||||    
T  15668546 cttcaagcttatattccttctgca 15668523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 19320453 - 19320374
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatca 186  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||| || |||| |||| |||||||||||    
T  19320453 tcttcagtgtataagcatccaatgccttctaattcctctgaaatagctgttgctctagccttctattccttctgcaatca 19320374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 24303008 - 24302898
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaac 206  Q
    |||||| || ||||| |||| |||||||| ||||||||| || |||  |||||||| ||||||||||| ||||||||||||| ||| | | |||||||||    
T  24303008 tcttcaatgaataagcatcccatgccttcaaattcctctaaattagcggttgctcctggcttccattccttctgcaatcataggca-tgagaataacaac 24302910  T
Q  207 atttaactaact 218  Q
    ||||||| ||||    
T  24302909 atttaacaaact 24302898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 20569763 - 20569824
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| | |||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  20569763 tcttgcaacataagcttcctttttgtagattccattgctctcatttgttcttccagaaccta 20569824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 33706049 - 33705980
Alignment:
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgca 182  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||| ||| |||| |||| |||||||    
T  33706049 gtggataagcatccaaagccttctaatttctctgaaatagtcgttgcttcagtcttctattcattctgca 33705980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 24302743 - 24302674
Alignment:
Q  359 acaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagaca 428  Q
    ||||||| ||||||||||||||  |||| ||||||||||||||||||||||||  |||||  ||||||||    
T  24302743 acaagctccctttttgtaaatttcattgctctcatttgttcttccagaacctattcttgatataaagaca 24302674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 14794023 - 14793980
Alignment:
Q  126 caatgccttctaattcctctgaaatagtcgttgctccaggcttc 169  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  14794023 caatgtcttataattcctctgaaatagtcgttgctccaggcttc 14793980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 19643731 - 19643685
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagt 153  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  19643731 tcttcagtggacaagcatccaatgccttctaattcctctaaaatagt 19643685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 10896244 - 10896183
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| |||||||||| |||||||  || ||||| |||||||||||| |||||||||||    
T  10896244 tcttgcaacacaagcttcccttttgtagtttttattgctctcatttgttcctccagaaccta 10896183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 18430725 - 18430674
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    ||||||||||| ||||  ||| ||||| ||||||||||||||||||||||||    
T  18430725 caagcttccttcttgttgattatattgctctcatttgttcttccagaaccta 18430674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 22683493 - 22683540
Alignment:
Q  114 tggataagtatccaatgccttctaattcctctgaaatagtcgttgctc 161  Q
    |||||||| || |||||||||||| ||||| |||||||||||||||||    
T  22683493 tggataagcattcaatgccttctatttcctttgaaatagtcgttgctc 22683540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 38781694 - 38781744
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
    ||||||||||||||||  |||| |||| |||| ||||||||||||||||||    
T  38781694 caagcttcctttttgttgattcaattgctctcttttgttcttccagaacct 38781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 30667303 - 30667355
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| ||||  |||||||||||||||||||    
T  30667303 caagcttcctttttgttgattcaattgctctctattgttcttccagaacctaa 30667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 22 - 401
Target Start/End: Complemental strand, 26120002 - 26119615
Alignment:
Q  22 tagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtgg---------ttgttcaattatactatgtcctttttgttgcgctcttca 112  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||         |||| ||||| ||||||||| ||||| ||||||||||||    
T  26120002 tagtcacagctgttatcttgtacttctgcaaacatgaggagtggagtagtggaggtagtggttgtacaattgtactatgtc-tttttcttgcgctcttca 26119904  T
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaa 212  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||| ||||    
T  26119903 gtggataagcatccaatgccttctaattcctctaaaatagtcgttgctccaggcttccattccttttgcaatgatatgcattcaaaataacaacagttaa 26119804  T
Q  213 ctaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatag 312  Q
    |||||||||||||||||| |||||||| | ||||| || ||||| ||||||||||||||||||||||||||||||  ||||||||||||  ||||||| |    
T  26119803 ctaacttcagcttccagttttcagactatgatgaaatccagcttttgaggctcttcagactctctgatgacgtcagcttctggtagacaacttctgatgg 26119704  T
Q  313 ttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttctt 401  Q
    | ||| || ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||||||    
T  26119703 tcttctgacgctctttgtctttagactctgtcttgaatcttgcaacacaagcttcctttttgtaaatttcattgttctcatttgttctt 26119615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 67 - 430
Target Start/End: Original strand, 23589731 - 23590106
Alignment:
Q  67 gtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggc 166  Q
    ||||||||||| ||||| ||||||||||||||  |   |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  23589731 gtagtggttgtacaattgtactatgtccttttcctat-gctctttagtggataaccatccaatgccttctaattcctctgaaatagtcgttgctccaggc 23589829  T
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctc 265  Q
     ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| || ||||| | ||||| | || ||    
T  23589830 atccattccttctgcaatcatatgcattcagaataacaacatttaactaacttcagcttccagtcttcagcttctgataaactccaacttcttatggttc 23589929  T
Q  266 ttcagactctctgatgacgtcaatttctggtagacagtttctgatag---------------ttttcagatgctctttgttttcagactctgtcttgaat 350  Q
    || |||   | ||||| |||| | |||| |||||| | |||||||||               | |||| | ||||||||  ||||||||||||||| | |    
T  23589930 tttaga--ttttgatggcgtctacttctagtagaccgcttctgatagacagcttttgatagttcttcaaacgctctttgacttcagactctgtcttcatt 23590027  T
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacata 430  Q
    ||||||| |||||||||||||||||||||| |  || ||||||||||||||| |||||||||||||| | ||||||||||    
T  23590028 cttgcaacacaagcttcctttttgtaaatt-tcatgctctcatttgttcttcaagaacctaaacttgtattaaagacata 23590106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 20567790 - 20567988
Alignment:
Q  37 tcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttc 135  Q
    |||||||||  |||||| |||  |||||||||||||||||| ||||| |||||| ||||||||  | |||||| ||||| |||||| |||||||||||||    
T  20567790 tcttgtactgttgcagatatggtgagtggagtagtggttgtacaattgtactattgtccttttc-tagcgctcatcagtcgataagcatccaatgccttc 20567888  T
Q  136 taattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttca 235  Q
     |||||||||||| |||||||||||||||| || ||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||    
T  20567889 aaattcctctgaagtagtcgttgctccaggattgcattccttctgcaatcataagcatt-agaataacaacatttaactaacttcagcttccagtcttca 20567987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 20969180 - 20969434
Alignment:
Q  32 tgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgc 131  Q
    ||||||||||||||| |||||| |||  |||||||||||||||||| ||||| |||||||||| |||  | || ||||| |||||||||| |||||||||    
T  20969180 tgttatcttgtactattgcagatatgcagagtggagtagtggttgtacaattgtactatgtccctttcct-gcactcttaagtggataagcatccaatgc 20969278  T
Q  132 cttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtc 231  Q
     ||||||||||||| |||||||||||| |  ||||||| |||| |||| || | || ||  |||| ||||||||  ||||||||||| ||||||||||||    
T  20969279 tttctaattcctcttaaatagtcgttgatgtaggcttctattccttctacagtgatgtgtcttcaaaataacaagctttaactaactacagcttccagtc 20969378  T
Q  232 ttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaa 288  Q
    |||||||| | | |||||  ||||||||||| ||||||||| || ||||||||||||    
T  20969379 ttcagactttgaagaacttcagcttctgaggatcttcagacgct-tgatgacgtcaa 20969434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 249
Target Start/End: Original strand, 13692408 - 13692617
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttcta 137  Q
    ||||||||| ||||||||||| |||| |||||||||||||  |||| ||||||||||||||   || ||||||| ||||||||| || ||||| ||||||    
T  13692408 cttgtactattgcagacatgaagagtagagtagtggttgtataattgtactatgtccttttc--tgtgctcttctgtggataagcattcaatgtcttcta 13692505  T
Q  138 attcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcaga 237  Q
    |||||||| |||||||| |||||| ||||||| |||| ||||||||| || |   |||||| ||||||  ||||||||||| |||||| |||| ||||||    
T  13692506 attcctctaaaatagtcattgctcgaggcttctattccttctgcaatgatgtatcttcatagtaacaaattttaactaactgcagctttcagtattcaga 13692605  T
Q  238 ctctcatgaact 249  Q
    |||| |||||||    
T  13692606 ctctgatgaact 13692617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 31589142 - 31588958
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||||||||||||| ||||| ||||||||||||||  | ||| ||||||||||||| | |||||||||||| ||||||||||||| |||  ||||||    
T  31589142 agtggagtagtggttgtacaattgtactatgtccttttcct-gcgttcttcagtggatacgcatccaatgccttttaattcctctgaattagctgttgct 31589044  T
Q  161 ccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatga 246  Q
    ||||||||| |||| ||||||||| || ||  |||| ||||||||  ||||| ||||| || |||| |||||||||||||| ||||    
T  31589043 ccaggcttctattccttctgcaatgatgtgtcttcagaataacaaactttaattaactgcaacttctagtcttcagactctgatga 31588958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 34638431 - 34638581
Alignment:
Q  32 tgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatg 130  Q
    |||||| ||||| || ||||||||||| |||||||||||||||||| |||||  ||||| ||||||||   |||||||||||||||||||  ||||||||    
T  34638431 tgttatgttgtagtattgcagacatgaagagtggagtagtggttgtacaattgcactattgtccttttc--tgcgctcttcagtggataaacatccaatg 34638528  T
Q  131 ccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| || |||||    
T  34638529 ccttcaaattcctctgaattagccgttgctccaggcttccattccttatgcaa 34638581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 27057329 - 27057483
Alignment:
Q  63 tggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctcc 162  Q
    ||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||     
T  27057329 tggagtagtggttgtacaattgtattatgtccttttt-ttgcgctcttcagtggatagtcatccaatgccttctaattcctctgaaatagtcattgctct 27057427  T
Q  163 aggcttccattctttctgcaatcatatgcattcataataacaacatttaactaact 218  Q
    || |||  |||| ||||||||| || ||  |||| ||||||||  |||||||||||    
T  27057428 agtcttttattccttctgcaatgatgtgtcttcagaataacaaactttaactaact 27057483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 38 - 216
Target Start/End: Complemental strand, 39799034 - 39798857
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttcta 137  Q
    ||||||||  || |||||||| |||||||||||||||||| |||||  ||||||||| |||| | |||||||| |||| ||||| ||||||||| |||||    
T  39799034 cttgtactgttgtagacatgaagagtggagtagtggttgtacaattgcactatgtcccttttct-gcgctcttaagtgaataagcatccaatgctttcta 39798936  T
Q  138 attcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaa 216  Q
    ||| ||||||||||||||||||||||| |||  |||| ||||||||| || ||  |||| ||||||||  |||||||||    
T  39798935 atttctctgaaatagtcgttgctccagccttttattccttctgcaattatgtgtcttcagaataacaaactttaactaa 39798857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 17262875 - 17262750
Alignment:
Q  48 tgcagacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctg 146  Q
    |||||||||||| ||||||||||||||||| ||||| |||||| |||||||   | ||||||||||||||||||| |||||||||||||| |||||||||    
T  17262875 tgcagacatgag-agtggagtagtggttgtacaattgtactattgtcctttacct-gcgctcttcagtggataagcatccaatgccttctcattcctctg 17262778  T
Q  147 aaatagtcgttgctccaggcttccattc 174  Q
    |||||||| |||||||||||||| ||||    
T  17262777 aaatagtcattgctccaggcttctattc 17262750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 20237459 - 20237391
Alignment:
Q  115 ggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||| || |||||    
T  20237459 ggataagcatcaaatgccttctaattcctctgaaatagtcgttgctcaaggcttctattccttttgcaa 20237391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 2152990 - 2152871
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaac 206  Q
    ||||| ||| ||||| || ||||| |||| ||||| ||||||||||| ||||||||||||||| |||| |||||| || ||   || | | ||| |||||    
T  2152990 tcttctgtgaataagcattcaatgtcttccaattcttctgaaatagttgttgctccaggcttctattccttctgctatgatgcacaattagaatgacaac 2152891  T
Q  207 atttaactaacttcagcttc 226  Q
    ||||||||||||||||||||    
T  2152890 atttaactaacttcagcttc 2152871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 27276276 - 27276153
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgt-tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttg 158  Q
    ||||||| ||||||||| ||||| |||||| ||||||| | | |||  ||||||||||||||| || |||||||||||||||||||||||||| | ||||    
T  27276276 agtggagaagtggttgtacaattgtactattgtcctttctctgtgcattcttcagtggataagcattcaatgccttctaattcctctgaaataattgttg 27276177  T
Q  159 ctccaggcttccattctttctgca 182  Q
     | || ||||| |||| |||||||    
T  27276176 tttcacgcttctattccttctgca 27276153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 22586088 - 22586011
Alignment:
Q  104 cgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgc 181  Q
    ||||||| |||||||||| || ||||||||||| | || ||| ||||||||||||||||||||||| |||| ||||||    
T  22586088 cgctctttagtggataagcattcaatgccttcttagtcttctaaaatagtcgttgctccaggcttctattccttctgc 22586011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 34637578 - 34637649
Alignment:
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    |||||||||| |||||||||||| |||||||||| |||||||||| |||| ||| ||| |||| ||||||||    
T  34637578 agtggataagcatccaatgccttttaattcctctaaaatagtcgtcgctctaggattctattccttctgcaa 34637649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 16607588 - 16607640
Alignment:
Q  124 tccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctt 176  Q
    |||||||||||| |||||||||||| ||| |||||||||||||||| ||||||    
T  16607588 tccaatgccttcaaattcctctgaattagccgttgctccaggcttctattctt 16607640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 23412828 - 23412776
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| |||| |||||||||||||||    
T  23412828 caagcttcctttttgttgattccattgctctcttttgctcttccagaacctaa 23412776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 203; Significance: 1e-110; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 21 - 418
Target Start/End: Complemental strand, 16307913 - 16307519
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataa 120  Q
    |||||||||  |||||| ||||||||||||| |||||||||||  |||||||||||| ||||| ||||||||||||||  | | ||||||||||||||||    
T  16307913 gtagtcacaattgttatgttgtactactgcaaacatgaggagttaagtagtggttgtacaattgtactatgtccttttcct-gtgctcttcagtggataa 16307815  T
Q  121 gtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttc 220  Q
    | ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||  ||| |||| |||||| ||||||||| ||||||||||| |    
T  16307814 gcatccaatgccttctaattcatctaaaatagtcgttgctccaggcttccattccttctataatgatatacattcagaataacaacttttaactaactcc 16307715  T
Q  221 agcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcaga 320  Q
    |||||||||| |||||||||| |||||||| ||||||||||| |||| ||||||| |||||||||||| || |||||| ||  ||||||| || |||| |    
T  16307714 agcttccagttttcagactctgatgaactccagcttctgaggttctttagactctatgatgacgtcaacttttggtagtcatcttctgatggtcttcaaa 16307615  T
Q  321 tgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttga 418  Q
     ||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||||| |||| |||||||||||||||||||||| | ||||||    
T  16307614 cgctctttgtcttcagactctgtcttcaatcttgcaacacaagcttcc--tttgtaaattccattgctctcatttgttcttccagaaccaatacttga 16307519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 40 - 347
Target Start/End: Complemental strand, 9064349 - 9064035
Alignment:
Q  40 tgtactactgcagacatgaggagtggagtag--------tggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgc 131  Q
    |||||||||||| ||||||||||||||||||        ||||||| ||||| |||||||| ||||||  |||||||||||||||||||| || ||||||    
T  9064349 tgtactactgcaaacatgaggagtggagtagtggagtaatggttgtacaattgtactatgttcttttt-ctgcgctcttcagtggataagcattcaatgc 9064251  T
Q  132 cttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtc 231  Q
    |||||||||||||  |||||||||||||||||||||||||||| |||| |||| ||||| ||||| ||||||||| ||||||||||| |||||| |||||    
T  9064250 cttctaattcctcataaatagtcgttgctccaggcttccattccttctacaatgatatgaattcagaataacaacttttaactaactccagctttcagtc 9064151  T
Q  232 ttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgtt 331  Q
    |||||||| | |||||||| ||||||| |||||||||||||||||||||||| |||  |||| | |  ||| ||||||| || || |||  ||||||||     
T  9064150 ttcagactatgatgaactccagcttctaaggctcttcagactctctgatgacatcagcttcttgcattcagcttctgatggtctttagaatctctttgtc 9064051  T
Q  332 ttcagactctgtcttg 347  Q
    |||| |||||||||||    
T  9064050 ttcatactctgtcttg 9064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 236
Target Start/End: Complemental strand, 13172546 - 13172323
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtgg---------ttgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    |||||||||  |||| |||||||||| |||||| |||||||||||||||||||         |||| ||||| |||||||||| |||  | ||| |||      
T  13172546 gtagtcacaattgttgtcttgtactattgcagatatgaggagtggagtagtggaggtagtggttgtacaattgtactatgtccatttcat-gcgatctca 13172448  T
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattta 211  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | || || | |||| || |||||| | ||||||||||||||    
T  13172447 agtggataagcatccaatgccttctaattactctgaaatagtcgttgctccaggcttctactccttttacaatgatgtgcattaaaaataacaacattta 13172348  T
Q  212 actaacttcagcttccagtcttcag 236  Q
    |||||||||||||| ||||||||||    
T  13172347 actaacttcagctttcagtcttcag 13172323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 18048020 - 18047827
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataa 120  Q
    |||| ||||| |||||| |||||||| |||| |||||| |||||||||||| ||||| ||||| |||||||| |||||  ||||||||||||| ||||||    
T  18048020 gtagacacagttgttatgttgtactattgcaaacatgaagagtggagtagttgttgtacaattgtactatgttcttttc-ttgcgctcttcagaggataa 18047922  T
Q  121 gtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaacta 215  Q
    | || ||||||||||||||||||||||||||  | |||||| ||||||  |||| |||| |||| || ||  |||| ||||||||| ||||||||    
T  18047921 gcattcaatgccttctaattcctctgaaatatccattgctctaggcttttattccttctacaatgatgtgtcttcagaataacaacctttaacta 18047827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 5035357 - 5035509
Alignment:
Q  31 ctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatg 130  Q
    |||||||||||||||| | |||| |||| |||||||||| ||||| | ||||| ||||||||| ||||  |  |||||||||||||||||| ||||||||    
T  5035357 ctgttatcttgtactattacagatatgaagagtggagtaatggttatacaattgtactatgtcattttccta-cgctcttcagtggataagcatccaatg 5035455  T
Q  131 ccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaat 184  Q
    ||||||||||  |||||||||| ||||| |||||||||  |||| |||||||||    
T  5035456 ccttctaatttatctgaaataggcgttgttccaggcttttattccttctgcaat 5035509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 16105141 - 16105018
Alignment:
Q  60 gagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    |||||||||| ||||||| ||||| || |||   | |||| |||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||    
T  16105141 gagtggagtaatggttgtacaattgtaatattgtcattttcttgcgctcttcaatggataagcatccaatgccttctaattcctataaaatagtcgttgc 16105042  T
Q  160 tccaggcttccattctttctgcaa 183  Q
    |||||||||  |||| ||||||||    
T  16105041 tccaggcttatattccttctgcaa 16105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 7488010 - 7487878
Alignment:
Q  102 tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataata 201  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||| ||||| |||||||||| ||  |||| |||| |||| |||  || ||  |||     
T  7488010 tgcgctcttcagtggataagcatccaatgccttcaaaatcctctgaattagtcattgctccagg-ttttattccttctacaatgatacacaatctgaatg 7487912  T
Q  202 acaacatttaactaacttcagcttccagtcttca 235  Q
    ||||||||||||||||||||||||| ||||||||    
T  7487911 acaacatttaactaacttcagcttctagtcttca 7487878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 18361727 - 18361540
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    |||||| |||||||||| ||||| |||||| |||||||    |||||| || |||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  18361727 agtggaatagtggttgtacaattgtactattgtcctttcc--tgcgctttttagtggataagcatctaatgccttctaattcctctgaaatagttgttgc 18361630  T
Q  160 tccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaact 249  Q
    | || ||||| |||| |||| ||||||| ||  ||||  ||||| |  | ||||||||| |||||||  | ||||||||||| |||||||    
T  18361629 ttcaagcttctattccttctacaatcatgtgtcttcaagataaccaactgtaactaactccagcttcttgacttcagactctgatgaact 18361540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 13172249 - 13172181
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttga 418  Q
    |||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||| |||||    
T  13172249 tcttgcaacacaagcttcctttttgttaactctattgctctcatttgttcttccagaacctaagcttga 13172181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 14304244 - 14304177
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttg 417  Q
    |||||||| |||||||| ||||||||| |||| || | |||||||||||||||||||||||| |||||    
T  14304244 tcttgcaacacaagcttgctttttgtagattcaatagctctcatttgttcttccagaacctatacttg 14304177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 16412048 - 16412150
Alignment:
Q  104 cgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttc-cattctttctgcaatcatatgcattcataataa 202  Q
    |||||||||  | ||||| ||||||||||||  |||| ||||||||||||||||||||||||||||  |||| ||||||||| ||| ||| | |||||||    
T  16412048 cgctcttcaaagaataagcatccaatgcctttcaatttctctgaaatagtcgttgctccaggcttcttattccttctgcaatgataggca-tgataataa 16412146  T
Q  203 caac 206  Q
    ||||    
T  16412147 caac 16412150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 2501161 - 2501095
Alignment:
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttct 179  Q
    ||||||||| || |||||||||||||||| || |||||| |||||||||||| |||| |||| ||||    
T  2501161 gtggataagaattcaatgccttctaattcttcagaaatattcgttgctccagtcttctattccttct 2501095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 7487739 - 7487677
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatc-tcatttgttcttccagaaccta 411  Q
    ||||||||||||| ||||||||||||| |||| ||||||| | ||||| ||||||||||||||    
T  7487739 tcttgcaatacaaacttcctttttgtagattcaattgatcttaatttgctcttccagaaccta 7487677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 16472743 - 16472805
Alignment:
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattc 174  Q
    |||||||||| ||||||||||||||||| ||| ||||| ||||||| |||||| |||| ||||    
T  16472743 agtggataagcatccaatgccttctaatgcctttgaaaaagtcgttactccagtcttctattc 16472805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 14114101 - 14114162
Alignment:
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattc 174  Q
    ||||||||| ||| ||||||||||||||| |||||||||||  ||||||||| |||| ||||    
T  14114101 gtggataagcatctaatgccttctaattcatctgaaatagtttttgctccagtcttctattc 14114162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 14423751 - 14423812
Alignment:
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattc 174  Q
    ||||||||| ||| ||||||||||||||| |||||||||||  ||||||||| |||| ||||    
T  14423751 gtggataagcatctaatgccttctaattcatctgaaatagtttttgctccagtcttctattc 14423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 15871190 - 15871121
Alignment:
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgca 182  Q
    ||||||||| ||||||||||||||||||| || |||| | | |||||||||| |||| |||| |||||||    
T  15871190 gtggataagcatccaatgccttctaattcttcagaaaaatttgttgctccagtcttctattccttctgca 15871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 428
Target Start/End: Original strand, 16412318 - 16412395
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagaca 428  Q
    ||||||| |||||| ||||||||||| |||  |||| ||| ||||||||||||||||||||  |||||  ||||||||    
T  16412318 cttgcaacacaagcatcctttttgtagattacattgctcttatttgttcttccagaacctatgcttgatttaaagaca 16412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 48800483 - 48800431
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| ||||||||||||||||||||    
T  48800483 caagcttcctttttgttgattccattgctctcttttgttcttccagaacctaa 48800431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 13880906 - 13880956
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
    ||||||||||| ||||  |||| |||| |||||||||||||||||||||||    
T  13880906 caagcttccttcttgttgattccattgctctcatttgttcttccagaacct 13880956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 16412812 - 16412854
Alignment:
Q  137 aattcctctgaaatagtcgttgctccaggcttccattctttct 179  Q
    |||||||||||||||||||||||||| |||||| |||| ||||    
T  16412812 aattcctctgaaatagtcgttgctcctggcttctattccttct 16412854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 11572347 - 11572278
Alignment:
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgca 182  Q
    |||| |||| || ||||||||||||||||||||||||||   |||||| ||| |||| |||| |||||||    
T  11572347 gtggttaagcatacaatgccttctaattcctctgaaatatctgttgcttcagtcttctattccttctgca 11572278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 12366592 - 12366540
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| ||| ||||||||||||||||    
T  12366592 caagcttcctttttgttgattccattgctctctttttttcttccagaacctaa 12366540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 59 - 419
Target Start/End: Original strand, 16869976 - 16870334
Alignment:
Q  59 ggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttg 158  Q
    ||||||||||| ||||||| ||||| |||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||||||   |||    
T  16869976 ggagtggagtaatggttgtacaattgtactatgtcctttttcctgcgctctttagtggataagcatccaatgccttctaattcctctgaaatagcaattg 16870075  T
Q  159 ctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttct 258  Q
    |||||||||| ||||| ||||||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  16870076 ctccaggctttcattcattctgcaatgatatgcattcagaataataacttttaactaacttcagcttccagtcttcagactctgataaactccagcttct 16870175  T
Q  259 gaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttcagactctgtcttgaatcttgcaat 358  Q
    |||| ||||||||   |||||||||||||| |||| |||||||  || |||| || ||||||||||||||||  |||||||||||||||||||||||||     
T  16870176 gaggttcttcaga--ttctgatgacgtcaacttctagtagacaacttttgatggtcttcagatgctctttgtcctcagactctgtcttgaatcttgcaac 16870273  T
Q  359 acaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaa 419  Q
    ||| |||||||| |||||||||  |||| |||||||||||||| ||||||||| |||||||    
T  16870274 acacgcttccttgttgtaaatttcattgctctcatttgttctttcagaacctatacttgaa 16870334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 294
Target Start/End: Complemental strand, 18130124 - 18129853
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataa 120  Q
    |||| |||| |||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||||||||  |  |||||||||||||||||    
T  18130124 gtagacacaactgttatcttgtactattgcagacatgaagagtggagtagtggttgtacaattgtactgtgtccttttcata-cgctcttcagtggataa 18130026  T
Q  121 gtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttc 220  Q
    | ||||||| |||||||||||||||||||||| | || ||||||||||  |||| ||||||||| |  ||  |||| ||||||||| |||||||||||||    
T  18130025 gcatccaataccttctaattcctctgaaatagcc-ttactccaggcttttattccttctgcaatgacgtgtcttcagaataacaacttttaactaacttc 18129927  T
Q  221 agcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctg 294  Q
    ||||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  18129926 agcttccagacttcagactctgatgaacttcagcttctgaggctcttcagactctctgatgacgtcagtttctg 18129853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 69 - 347
Target Start/End: Original strand, 9346778 - 9347052
Alignment:
Q  69 agtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggctt 168  Q
    ||||||||| ||||| |||| |||||||||   ||||||||| |||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||    
T  9346778 agtggttgtacaattgtactgtgtcctttta--tgcgctctttagtggataagcatccaatgccttctaatt--tttgaaatagtcgttgctccaggctt 9346873  T
Q  169 ccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttc 268  Q
    |||||  ||||||||| ||||| ||||| ||||||||| ||||||||| | ||||||||||||||||||||||  ||||||  |||||| ||||||||||    
T  9346874 ccatttcttctgcaatgatatgaattcagaataacaacttttaactaagtccagcttccagtcttcagactctgttgaacttcagcttccgaggctcttc 9346973  T
Q  269 agactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttcagactctgtcttg 347  Q
    ||||||||||| |||||||  |||| |||| ||| ||||||| || |||| | ||||||||  ||||||||||||||||    
T  9346974 agactctctgacgacgtcagcttctagtagtcagcttctgatggtcttcatacgctctttggcttcagactctgtcttg 9347052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 31 - 320
Target Start/End: Complemental strand, 18517265 - 18516976
Alignment:
Q  31 ctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatg 130  Q
    |||||||||||||||| || |||||||| |||||||||| ||||||| ||||| ||||||||||||||  |||||||||||| ||  |||| ||||||||    
T  18517265 ctgttatcttgtactattgtagacatgaagagtggagtaatggttgtacaattgtactatgtccttttc-ttgcgctcttcaatgattaagcatccaatg 18517167  T
Q  131 ccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaaca-tttaactaacttcagcttccag 229  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||| || ||  |||| ||||| || | ||||||||||| ||||||||||    
T  18517166 ccttctaattcctttgaaatagtcgttgctccaggcttctattccttctgtaatgatgtgtcttcagaataaaaaaactttaactaactgcagcttccag 18517067  T
Q  230 tcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcaga 320  Q
    |||||||||||| |||||||  | ||||||| | |||||||||||| |||||||||||  |||||| || ||| ||||||| || ||||||    
T  18517066 tcttcagactctgatgaacttcaacttctgatgatcttcagactctttgatgacgtcagcttctggcagccagcttctgatggtcttcaga 18516976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 23054388 - 23054577
Alignment:
Q  67 gtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggc 166  Q
    ||||||||||| ||||| ||||||||||||||  | |||||||||| |||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  23054388 gtagtggttgtacaattgtactatgtccttttcct-gcgctcttcattggataaacatccaatgccttctaatttctctgaaatagtcgttgctccaggc 23054486  T
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttc 257  Q
    ||| |||| ||||||||| || |||| ||| ||| ||||||||||||| |||||||||||||||||||||  ||| |||| || |||||||    
T  23054487 ttctattccttctgcaatgatgtgcaatcaaaatgacaacatttaactgacttcagcttccagtcttcagcttctgatgatctttagcttc 23054577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 64 - 287
Target Start/End: Complemental strand, 26280121 - 26279900
Alignment:
Q  64 ggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctcca 163  Q
    |||||||||||||| ||||| ||||||||||||||  | || ||||||| |||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  26280121 ggagtagtggttgtacaattgtactatgtccttttcat-gcactcttcaatggataagcatccaatgacttctaattcatctgaaatagtcgttgctcca 26280023  T
Q  164 ggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggc 263  Q
    |||||| |||| |||| || | || ||  |||| |||||||| ||||||||||||  |||||| |||||||||||||| |||||||  ||||||||| |     
T  26280022 ggcttctattccttctacagtgatgtgtcttcaaaataacaaaatttaactaactgtagcttctagtcttcagactctgatgaacttcagcttctgatga 26279923  T
Q  264 tcttcagactctctgatgacgtca 287  Q
    ||||||||| || |||||||||||    
T  26279922 tcttcagacgct-tgatgacgtca 26279900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 185
Target Start/End: Complemental strand, 21683280 - 21683135
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttcta 137  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||| ||||||||||||||  | |||||||||| |||||||| |||||||||||||||    
T  21683280 cttgtactattgcagacatgag-agtggagtagtggttatacaattgtactatgtccttttcct-gcgctcttcactggataagcatccaatgccttcta 21683183  T
Q  138 attcctctgaaatagtcgttgctccaggcttccattctttctgcaatc 185  Q
    |||||| |||||||||||||||| ||| |||| |||| ||||||||||    
T  21683182 attcctttgaaatagtcgttgcttcagacttctattccttctgcaatc 21683135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 20110003 - 20109847
Alignment:
Q  70 gtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttc 169  Q
    |||||||| ||||| ||||||||||||||  |||| ||||||| | ||| |||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  20110003 gtggttgtacaattgtactatgtccttttc-ttgcactcttcaatagatgagtatccaatgccttctaattcctttaaaatagtcgttgctccatgcttc 20109905  T
Q  170 cattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcag 236  Q
     |||| ||         | |||| ||| ||| ||||||| |||||||||||||||||||||||||||    
T  20109904 tattcctt---------tctgcagtcaaaatgacaacatataactaacttcagcttccagtcttcag 20109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 1090590 - 1090483
Alignment:
Q  80 aattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttg-ctccaggcttccattctttc 178  Q
    |||| ||||||||||||||   ||||||||| |||||||||| ||||||||||||| ||||  |||||| ||| ||||| |||| ||||||||||| |||    
T  1090590 aattgtactatgtccttttgcatgcgctctttagtggataagcatccaatgccttcaaatttatctgaattagccgttgcctccgggcttccattccttc 1090491  T
Q  179 tgcaatca 186  Q
    ||||||||    
T  1090490 tgcaatca 1090483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 23054629 - 23054707
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagaca 428  Q
    |||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||  |||||| ||||||||    
T  23054629 tcttgcaacacaagcttcccttttgtaaattatattgttctcatttgttcttccagaccctatgcttgaattaaagaca 23054707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 16478747 - 16478690
Alignment:
Q  108 cttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccagg 165  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  16478747 cttcagtagataagcatccaatgccttctaatttctctgaaatagtcgttgctccagg 16478690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 20109746 - 20109685
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| |||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  20109746 tcttgcaacacaagcttcctttttgtagattccattgttctcatttgttcttccagaaccta 20109685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 419
Target Start/End: Original strand, 9658974 - 9659044
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaa 419  Q
    ||||||||| | ||| ||||||||||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  9658974 atcttgcaacataagtttcctttttgtaaattgcattgatctcatgtgttcttccagaacctatacttgaa 9659044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 2819336 - 2819274
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttct 179  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||||| |||| |||| ||||    
T  2819336 ataagcatctaatgccttctaattcctctgaaatagccgttgctccagtcttctattcattct 2819274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 24227759 - 24227699
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| |||||||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  24227759 tcttgcaacacaagcttcctttttgtagattccattgctctcatttgttctt-cagaaccta 24227699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 26703611 - 26703692
Alignment:
Q  102 tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    |||||||||||||||||||| || ||||| ||||||||| ||||||||||| | | | ||||||||||  ||| ||||||||    
T  26703611 tgcgctcttcagtggataagcatacaatgtcttctaatttctctgaaatagccatcgttccaggcttctgttccttctgcaa 26703692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 17024743 - 17024687
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaactt 416  Q
    ||||||||||| ||||  |||| ||||||||||||||||||||||||||||| ||||    
T  17024743 caagcttccttcttgttgattccattgatctcatttgttcttccagaacctatactt 17024687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 17018650 - 17018741
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattt 210  Q
    ||||| ||||||||| ||| |||||||||||| |||| ||||||||| ||||| |||| ||||||||| ||| ||  | |||||||||||||||    
T  17018650 ataagcatccaatgctttccaattcctctgaagtagttgttgctccaagcttctattc-ttctgcaatgataggc-gtgataataacaacattt 17018741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 18129827 - 18129737
Alignment:
Q  335 agactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagac 427  Q
    ||||| |||||| |||||||||| ||||| |||||||  | |||||  |||| |||||||||||||| ||||||| | ||||||| |||||||    
T  18129827 agactatgtcttcaatcttgcaacacaaggttccttt--gaaaatttcattgctctcatttgttctttcagaaccaatacttgaattaaagac 18129737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 24227973 - 24227929
Alignment:
Q  137 aattcctctgaaatagtcgttgctccaggcttccattctttctgc 181  Q
    |||||||||||| |||||||||||||||||||| |||| ||||||    
T  24227973 aattcctctgaattagtcgttgctccaggcttcaattccttctgc 24227929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 402
Target Start/End: Complemental strand, 1090315 - 1090272
Alignment:
Q  359 acaagcttcctttttgtaaattctattgatctcatttgttcttc 402  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||    
T  1090315 acaagctccctttttgtaaattccattgctctcatttgttcttc 1090272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20909478 - 20909545
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaat 184  Q
    ||||| ||| |||| |||| || ||||||||||| |||||||||||||||||| |||| |||| ||||    
T  20909478 ataagcatctaatgtcttccaaatcctctgaaatcgtcgttgctccaggcttctattccttctacaat 20909545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 16235072 - 16235022
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
    ||||||||||||||||  |||| |||| |||| ||||||||||||||||||    
T  16235072 caagcttcctttttgttgattccattgctctcttttgttcttccagaacct 16235022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 18896346 - 18896298
Alignment:
Q  363 gcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| ||||  |||| |||| ||||||||||||||||||||||||    
T  18896346 gcttccttcttgttgattccattgctctcatttgttcttccagaaccta 18896298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 178; Significance: 8e-96; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 34 - 408
Target Start/End: Complemental strand, 4397 - 4016
Alignment:
Q  34 ttatcttgtactactgcagacatgaggagtggagtagtgg--------ttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatc 125  Q
    |||||||||||||||||| |||||||||||||||||||||        |||| ||||| ||| |||| |||||  | |||||||||| |||||||| |||    
T  4397 ttatcttgtactactgcaaacatgaggagtggagtagtggagaagtggttgtacaattgtacaatgttcttttcct-gcgctcttcaatggataagcatc 4299  T
Q  126 caatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagctt 225  Q
    |||||| ||||||||| |||||||||||||||| || |||||||||||| |||| |||||||||| ||||| ||||||||| ||||||||||| ||||||    
T  4298 caatgctttctaattcttctgaaatagtcgttgttctaggcttccattccttctacaatcatatgaattcaaaataacaacttttaactaactccagctt 4199  T
Q  226 ccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctc 325  Q
    ||||||||||||||||  ||||||  |||||||||||||||||||||||| |||||||| ||  ||||||||| |||||| |||| || |||||| ||||    
T  4198 ccagtcttcagactctgttgaacttcagcttctgaggctcttcagactctttgatgacgccagcttctggtagccagtttttgatggtgttcagacgctc 4099  T
Q  326 tttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaac 408  Q
    ||||| ||||||||||||||| |||||||||| |   ||||||||||||||||||| ||||  ||||||||||||| ||||||    
T  4098 tttgtcttcagactctgtcttcaatcttgcaacaagggcttcctttttgtaaattccattgccctcatttgttctttcagaac 4016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 34 - 408
Target Start/End: Complemental strand, 11680 - 11299
Alignment:
Q  34 ttatcttgtactactgcagacatgaggagtggagtagtgg--------ttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatc 125  Q
    |||||||||||||||||| |||||||||||||||||||||        |||| ||||| ||| |||| |||||  | |||||||||| |||||||| |||    
T  11680 ttatcttgtactactgcaaacatgaggagtggagtagtggagaagtggttgtacaattgtacaatgttcttttcct-gcgctcttcaatggataagcatc 11582  T
Q  126 caatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagctt 225  Q
    |||||| ||||||||| |||||||||||||||| || |||||||||||| |||| |||||||||| ||||| ||||||||| ||||||||||| ||||||    
T  11581 caatgctttctaattcttctgaaatagtcgttgttctaggcttccattccttctacaatcatatgaattcaaaataacaacttttaactaactccagctt 11482  T
Q  226 ccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctc 325  Q
    ||||||||||||||||  ||||||  |||||||||||||||||||||||| |||||||| ||  ||||||||| ||| || |||| || |||||| ||||    
T  11481 ccagtcttcagactctgttgaacttcagcttctgaggctcttcagactctttgatgacgccagcttctggtagccagcttttgatggtgttcagacgctc 11382  T
Q  326 tttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaac 408  Q
    ||||| ||||||||||||||| |||||||||| |   ||||||||||||||||||| ||||  ||||||||||||| ||||||    
T  11381 tttgtcttcagactctgtcttcaatcttgcaacaagggcttcctttttgtaaattccattgccctcatttgttctttcagaac 11299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 21 - 320
Target Start/End: Complemental strand, 8729181 - 8728882
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggtt-gttcaattatactatgtcctttttgttgcgctcttcagtggata 119  Q
    ||||||||| |||||||||||||||| || |||||||| |||||||||||||||| || ||||| |||||||||||||||  ||||||||||||||||||    
T  8729181 gtagtcacaactgttatcttgtactattgtagacatgaagagtggagtagtggtttgtacaattgtactatgtcctttttcatgcgctcttcagtggata 8729082  T
Q  120 agtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaactt 219  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  8729081 agcatccaatgccttctaattcctctaaaatagtcgttgctccaggcttccattccttctgcaatcatatgcattcaaaataacaacatttaacaaactt 8728982  T
Q  220 cagcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttca 318  Q
    ||| |||||||||||||||||| |||||||  ||||||||| || ||||||||  ||  ||||||||||  ||||||||| ||  |||||||||| ||||    
T  8728981 cagtttccagtcttcagactctgatgaacttcagcttctgatggttcttcaga--ctaagatgacgtcagcttctggtaggcaacttctgatagtcttca 8728884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 21 - 320
Target Start/End: Complemental strand, 9081068 - 9080769
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggtt-gttcaattatactatgtcctttttgttgcgctcttcagtggata 119  Q
    ||||||||| |||||||||||||||| || |||||||| |||||||||||||||| || ||||| |||||||||||||||  ||||||||||||||||||    
T  9081068 gtagtcacaactgttatcttgtactattgtagacatgaagagtggagtagtggtttgtacaattgtactatgtcctttttcatgcgctcttcagtggata 9080969  T
Q  120 agtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaactt 219  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  9080968 agcatccaatgccttctaattcctctaaaatagtcgttgctccaggcttccattccttctgcaatcatatgcattcaaaataacaacatttaacaaactt 9080869  T
Q  220 cagcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttca 318  Q
    ||| |||||||||||||||||| |||||||  ||||||||| || ||||||||  ||  ||||||||||  ||||||||| ||  |||||||||| ||||    
T  9080868 cagtttccagtcttcagactctgatgaacttcagcttctgatggttcttcaga--ctaagatgacgtcagcttctggtaggcaacttctgatagtcttca 9080771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 21 - 427
Target Start/End: Original strand, 16882254 - 16882669
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagta---------gtggttgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||||         |||||||| ||||| ||||||||  |||||  |||||| |||    
T  16882254 gtagtcacaactgttgtcttgtactactgcagacaagaggagtggagtaatggaggtagtggttgtacaattgtactatgtt-tttttcctgcgctattc 16882352  T
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattta 211  Q
    |||||||||| |||||||||||| |||||||||||||||||  |||| | ||||||||||||| |||||||||||||| |||||| ||||||||| ||||    
T  16882353 agtggataagcatccaatgccttttaattcctctgaaatagctgttgttgcaggcttccattccttctgcaatcatatccattcagaataacaactttta 16882452  T
Q  212 actaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgat 310  Q
    || ||||| ||||||||||||||| ||||| || || | || ||||||| || |||||||||||||||||||| |||  ||||||||||||  |||| ||    
T  16882453 acaaactttagcttccagtcttcaaactctgatcaattttaacttctgatggttcttcagactctctgatgacatcagcttctggtagacaacttcttat 16882552  T
Q  311 agttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
    ||| || ||| ||||||||| || |||||| |||||||||||||||| ||| |||||||||||| |||||  | || |||||||||||||||||| |||     
T  16882553 agtctttagacgctctttgtctttagactccgtcttgaatcttgcaacacatgcttcctttttgcaaattgcagtgctctcatttgttcttccaggacca 16882652  T
Q  411 aaacttgaactaaagac 427  Q
    | ||||||| |||||||    
T  16882653 atacttgaagtaaagac 16882669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 69 - 275
Target Start/End: Complemental strand, 16794418 - 16794213
Alignment:
Q  69 agtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggctt 168  Q
    ||||||||| ||||| ||||||||||||||| | |||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||    
T  16794418 agtggttgtacaattgtactatgtcctttttct-gcgctcttcaatggataagcatccaatgcctcctaattcctctgaaatagtcattgcttcaggctt 16794320  T
Q  169 ccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttc 268  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||| ||| |||||||||||| ||||    
T  16794319 ccattccttctgcaatcatatgcattcagaataacaacttttaactaacttcagcttccaggcttcagactctgatgagctccagcttctgaggcccttc 16794220  T
Q  269 agactct 275  Q
    | |||||    
T  16794219 atactct 16794213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 26 - 277
Target Start/End: Original strand, 20418203 - 20418461
Alignment:
Q  26 cacagctgttatcttgtactactgcagacatgaggagtggagta--------gtggttgttcaattatactatgtcctttttgttgcgctcttcagtgga 117  Q
    ||||| ||||||||||||||| ||||||||||  ||||||||||        |||||| | ||||| ||||||||| ||||  ||||||||||||| |||    
T  20418203 cacagttgttatcttgtactattgcagacatggagagtggagtaatggattagtggttttccaattgtactatgtcattttc-ttgcgctcttcagagga 20418301  T
Q  118 taagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaac 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||| ||||||| || ||||| ||||||||| ||||||||||    
T  20418302 taagtatccaatgccttctaattcctctgaaatagtcgttgctccagacttccatttcttctacaatcatgtgtattcagaataacaacttttaactaac 20418401  T
Q  218 ttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctct 277  Q
    | ||||||||| |||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  20418402 tccagcttccaatcttcagaatctgatgaacttcagcttctgaggctcttcagactctct 20418461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 28 - 271
Target Start/End: Complemental strand, 22766708 - 22766470
Alignment:
Q  28 cagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatcc 126  Q
    |||||||  |||||||| | || |||||||| |||||||||||||||||| ||||| |||||| ||||||||  | ||||||||||||||||||| ||||    
T  22766708 cagctgtattcttgtacaattgtagacatgaagagtggagtagtggttgtacaattgtactattgtccttttcct-gcgctcttcagtggataagcatcc 22766610  T
Q  127 aatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttc 226  Q
    ||||||||| |||||||||||| ||| |||||||| |||||||||||| ||||||||||||| ||||||| ||||||||| || ||||||    ||||||    
T  22766609 aatgccttcaaattcctctgaattagccgttgctctaggcttccattccttctgcaatcataagcattcagaataacaac-ttaaactaa----agcttc 22766515  T
Q  227 cagtcttcagactctcatgaactctagcttctgaggctcttcaga 271  Q
    ||||||||||||| | |||||||  ||||||||| | ||||||||    
T  22766514 cagtcttcagactttgatgaacttcagcttctgatgatcttcaga 22766470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 22 - 226
Target Start/End: Complemental strand, 4243353 - 4243151
Alignment:
Q  22 tagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataag 121  Q
    ||||||||| |||  ||||||||||||||| ||| |  |||||||||||||||||| ||||| ||||||||| ||||  |||||||||||||||||||||    
T  4243353 tagtcacagttgtattcttgtactactgcatacaaggcgagtggagtagtggttgtacaattgtactatgtcattttc-ttgcgctcttcagtggataag 4243255  T
Q  122 tatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttca 221  Q
     || ||||||||| ||||||||||||||||||||||||||||| ||||| ||  || |||||||||| | ||||| ||||||||| | |||| |||||||    
T  4243254 cattcaatgcctt-taattcctctgaaatagtcgttgctccagacttccttttcttatgcaatcataagtattcagaataacaacttctaacaaacttca 4243156  T
Q  222 gcttc 226  Q
    |||||    
T  4243155 gcttc 4243151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 61 - 260
Target Start/End: Complemental strand, 19198022 - 19197823
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    |||| |||||||||||| ||||| |||||| |||||||| |||||  |||||| |||||||  ||||||||||||| |||||||||||| ||||||||||    
T  19198022 agtgaagtagtggttgtacaattttactattgtcctttt-gttgcattcttcaatggataatcatccaatgccttcaaattcctctgaagtagtcgttgc 19197924  T
Q  160 tccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctg 259  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||| ||||||  |  |||||||||||||  ||| |||| || |||||||||    
T  19197923 tccaggcttccattccttctgcaatcatatgcattcagaataacaaaatttagctaactgaatattccagtcttcagcttctgatgatctttagcttctg 19197824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 167 - 427
Target Start/End: Original strand, 7494387 - 7494646
Alignment:
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctct 266  Q
    |||||||  ||||||||| ||||| |||||||||| |||| ||||||||||| ||||||||| |||||| ||||| |||||||  ||||||||| |||||    
T  7494387 ttccattacttctgcaatgatatgaattcataatagcaacgtttaactaactccagcttccaatcttcatactctgatgaacttcagcttctgatgctct 7494486  T
Q  267 tcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagctt 366  Q
    ||||||||||||||||  | |  ||||| | |  || |||| || || |||||| |||||||||  |||||||||||||| |||||||||| | ||||||    
T  7494487 tcagactctctgatgaacttagcttctgatggttagcttctaatggtcttcagacgctctttgtcatcagactctgtcttcaatcttgcaacataagctt 7494586  T
Q  367 cctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagac 427  Q
    || |||   |||||| |||| |||||||||||||| || || | ||||||||| |||||||    
T  7494587 cc-tttgaaaaattccattgctctcatttgttctttcataatcaaaacttgaattaaagac 7494646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 10851832 - 10851997
Alignment:
Q  70 gtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttc 169  Q
    |||||||| ||||| ||||||||||||||  ||| ||||||||||| ||||| ||||||||| |||||| |||| |||||||| |||| ||||| ||||     
T  10851832 gtggttgtacaattgtactatgtccttttc-ttgtgctcttcagtgaataagcatccaatgctttctaactcctttgaaatagccgttactccaagcttt 10851930  T
Q  170 cattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcag 236  Q
     |||| ||||||||| || |||| ||| ||| |||||||||||||||||||| |||||| |||||||    
T  10851931 tattccttctgcaatgatgtgcaatcaaaatgacaacatttaactaacttcaacttccaatcttcag 10851997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 27374832 - 27375050
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataata----a 202  Q
    |||| |||||| ||| ||||||||||||||||||||||| ||| | ||||||||| |||||||||| | |||| |||| ||  |  |||| ||||    |    
T  27374832 tctttagtggagaagcatccaatgccttctaattcctctaaaacactcgttgctctaggcttccataccttctacaatgatcagacttcagaatatataa 27374931  T
Q  203 caacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagaca 301  Q
    |||| || |||| | ||||||||||| |||||| ||| | |||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||| ||    
T  27374932 caactttgaactgatttcagcttccaatcttcatactttgatgaactctagcttctgatggttcttcagactctctgatgacgtcaacttctgatagtca 27375031  T
Q  302 gtttctgatagttttcaga 320  Q
    | ||||||| || ||||||    
T  27375032 gcttctgatggtcttcaga 27375050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 13699372 - 13699530
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||||||||||||| ||||| |||||||| ||||||||  |||||||  | ||||||| |||||||||||||| |||||||||||||||| ||||||    
T  13699372 agtggagtagtggttgtacaattgtactatgttctttttgta-cgctcttatgcggataagcatccaatgccttcttattcctctgaaatagttgttgct 13699470  T
Q  161 ccaggcttccattctttctgcaatcatatgcattcataataa-caacatttaactaacttc 220  Q
    |||| ||||  |||||||||||||||| ||  |||| ||||| ||||| ||||||||||||    
T  13699471 ccagacttcttttctttctgcaatcatgtgtcttcaaaataaccaaca-ttaactaacttc 13699530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 315077 - 315224
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttct 136  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||  |||||| ||||||||  | ||||||||||||||||||| || |||||||||||    
T  315077 cttgtactattgcagacatgag-agtggagtagtggttgtacaatg-tactattgtccttttcat-gcgctcttcagtggataagcattcaatgccttct 315173  T
Q  137 aattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcat 187  Q
    |||||||||||||||| |||||||||||| ||  |||| | ||||||||||    
T  315174 aattcctctgaaatagccgttgctccaggtttttattcctcctgcaatcat 315224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 287
Target Start/End: Original strand, 7477696 - 7477816
Alignment:
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctct 266  Q
    |||||||| ||||||||| ||||| ||||| ||||||||  |||||||||||  ||||||||||||||| ||||| |||||||  ||||||||| |||||    
T  7477696 ttccattccttctgcaatgatatgaattcagaataacaatgtttaactaactctagcttccagtcttcatactctaatgaacttcagcttctgatgctct 7477795  T
Q  267 tcagactctctgatgacgtca 287  Q
    |||||||||||||||| ||||    
T  7477796 tcagactctctgatgatgtca 7477816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 13653930 - 13654108
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||||||| ||||| ||||| || |||||||||||| | | | ||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||    
T  13653930 agtggagtagttgttgtacaattgtattatgtcctttttct-gtgttcttcagtggataataatctaatgccttctaattcctctgaaatagttgttgct 13654028  T
Q  161 ccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactct 241  Q
    ||||||||| ||||  |||||||| || ||  |||| |||||||| ||| |||||||| || ||||  | |||||||||||    
T  13654029 ccaggcttctattc-ctctgcaatgatgtgtcttcagaataacaaaattcaactaactgcaacttcttgacttcagactct 13654108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 21317405 - 21317568
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||||||||||||| ||||| || |||||||||||  | ||||||||||| ||||||| ||| |||||||| |||||| ||| ||||||||||||||    
T  21317405 agtggagtagtggttgtacaattgtattatgtccttttcct-gcgctcttcagaggataagcatcaaatgccttataattcatctaaaatagtcgttgct 21317503  T
Q  161 ccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagctt 225  Q
    | ||||||| |||| |||||||||||| ||   ||| | ||||||  ||||||||||| ||||||    
T  21317504 ctaggcttctattccttctgcaatcatgtgtcatcaaattaacaaactttaactaactgcagctt 21317568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 14077487 - 14077330
Alignment:
Q  68 tagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggct 167  Q
    |||||||||| || || ||||||||||||||  ||||||||||||||||||||| |||||||| ||||||||||||||||||||  | ||| ||||||||    
T  14077487 tagtggttgtacagttgtactatgtccttttc-ttgcgctcttcagtggataagcatccaatgtcttctaattcctctgaaatatccattgatccaggct 14077389  T
Q  168 tccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttc 226  Q
       |||  ||||||||| || || | ||| ||| ||||||| |||||||||||||||||    
T  14077388 cttattggttctgcaatgatgtgtaatcaaaatgacaacatataactaacttcagcttc 14077330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 430
Target Start/End: Complemental strand, 8728877 - 8728796
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacata 430  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  8728877 atcttgcaacacaagcttcctttttgtaaattccattgctctcatttgttcttccagaacctatacttgaattaaagacata 8728796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 430
Target Start/End: Complemental strand, 9080764 - 9080683
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacata 430  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  9080764 atcttgcaacacaagcttcctttttgtaaattccattgctctcatttgttcttccagaacctatacttgaattaaagacata 9080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 17697676 - 17697797
Alignment:
Q  114 tggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaac 213  Q
    |||||||| ||||||||||||| |||||||||||| |||   |||||||||||||| |||| ||||||||| ||  ||| | | ||| ||||||||||||    
T  17697676 tggataagcatccaatgccttcaaattcctctgaattagctattgctccaggcttctattccttctgcaatgatgcgcaattagaatgacaacatttaac 17697775  T
Q  214 taacttcagcttccagtcttca 235  Q
    ||||||||||||||||||||||    
T  17697776 taacttcagcttccagtcttca 17697797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 14072682 - 14072855
Alignment:
Q  39 ttgtactactgcagacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttcta 137  Q
    ||||||||  |||||||||  ||||||||| |||||||| ||| | |||||| ||||||||    ||| |||||| |||||||| ||||||||||||| |    
T  14072682 ttgtactatagcagacatggagagtggagtggtggttgtacaagtgtactattgtccttttccc-gcgttcttcaatggataagcatccaatgccttcaa 14072780  T
Q  138 attcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaac 213  Q
    |||||||| || || ||||||||||||||| |||||| ||||||| | ||||||| | | ||||||||||||||||    
T  14072781 attcctctaaattattcgttgctccaggctcccattccttctgcagttatatgca-tgagaataacaacatttaac 14072855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 416
Target Start/End: Complemental strand, 4243147 - 4242990
Alignment:
Q  269 agactctctgatgacgtcaatttctggtagacagtttctgatagtt-ttcagatgctctttgttttcagactctgtctt-----gaat----cttgcaat 358  Q
    |||||||||||||||||||  ||||||||||||| || |||||||| |||||||||||||||  || ||||| ||||||     || |    |||||||     
T  4243147 agactctctgatgacgtcagcttctggtagacagcttttgatagttcttcagatgctctttgcctttagactttgtcttcctcagactttttcttgcaac 4243048  T
Q  359 acaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaactt 416  Q
     |||||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||    
T  4243047 tcaagcttcctttttgtaaattccattgctctcatttgttcttccataacctatactt 4242990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 16305307 - 16305184
Alignment:
Q  60 gagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttg 158  Q
    |||||||||||||||||| ||| | || ||| ||||||||  | |||||||| |||| ||||||||||||||||||||| ||||||||||||| || |||    
T  16305307 gagtggagtagtggttgtacaaatgtaatattgtccttttcct-gcgctctttagtgcataagtatccaatgccttctatttcctctgaaatattcattg 16305209  T
Q  159 ctccaggcttccattctttctgcaa 183  Q
    || |||||||| |||| ||||||||    
T  16305208 cttcaggcttctattccttctgcaa 16305184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 102 - 249
Target Start/End: Original strand, 3087591 - 3087738
Alignment:
Q  102 tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataata 201  Q
    ||||||||| |||||||||| || |||||  ||||||||||||||||| ||| |||||| |||||||| |||| |||||||||||| ||  |||  ||||    
T  3087591 tgcgctctttagtggataagcattcaatgtattctaattcctctgaaagagttgttgcttcaggcttctattccttctgcaatcatgtgtcttcgaaata 3087690  T
Q  202 acaacatttaactaacttcagcttccagtcttcagactctcatgaact 249  Q
    || |  |||||||||||| ||||||  | | ||||||||| |||||||    
T  3087691 accaactttaactaacttgagcttcttgacatcagactctgatgaact 3087738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 65 - 183
Target Start/End: Original strand, 11078665 - 11078783
Alignment:
Q  65 gagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctcca 163  Q
    ||||||||| ||| ||||| |||||| ||||||||| |  ||||||| |||||||||| ||| |||||||||| |||||||| ||| ||| |||||||||    
T  11078665 gagtagtggatgtacaattgtactattgtcctttttcta-cgctcttaagtggataagcatctaatgccttctgattcctctaaaagagtagttgctcca 11078763  T
Q  164 ggcttccattctttctgcaa 183  Q
    |||||| |||| ||| ||||    
T  11078764 ggcttctattccttccgcaa 11078783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 14007585 - 14007717
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    ||||||||||||||||| |||||  ||||| ||||||||  | |||||||| |||||||||  ||||||||||||| ||||||||| || ||| | |||     
T  14007585 agtggagtagtggttgtacaattgcactattgtccttttcct-gcgctctttagtggataaacatccaatgccttcaaattcctctaaattagccattgt 14007683  T
Q  160 tccaggcttccattctttctgcaatcatatgcat 193  Q
    | ||||||||||||| ||||  ||||||| ||||    
T  14007684 tgcaggcttccattccttctataatcataggcat 14007717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 14072992 - 14073051
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaac 408  Q
    |||||| || |||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  14072992 atcttgtaacacaagcttcctttttgtagattccattgctctcatttgttcttccagaac 14073051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 27851603 - 27851678
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgca 182  Q
    ||||||| ||||||| |||||||| ||||||| | |||||||||||| ||||||||| ||||| |||| |||||||    
T  27851603 tcttcagcggataagcatccaatgtcttctaacttctctgaaatagttgttgctccatgcttctattccttctgca 27851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 17762248 - 17762134
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    ||||||||||||||||| ||||| |||||| ||||||| | |  |  |||||| |||||||  ||| ||||||||||||||||||  ||||| |||||||    
T  17762248 agtggagtagtggttgtacaattttactattgtcctttctctgaccttcttcactggataaacatcaaatgccttctaattcctccaaaataatcgttgc 17762149  T
Q  160 tccaggcttccattc 174  Q
    |||| ||||| ||||    
T  17762148 tccaagcttctattc 17762134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 19063568 - 19063454
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    ||||||||||||||||| ||||| |||||| ||||||| | |  |  |||||| |||||||  ||| ||||||||||||||||||  ||||| |||||||    
T  19063568 agtggagtagtggttgtacaattttactattgtcctttctctgaccttcttcactggataaacatcaaatgccttctaattcctccaaaataatcgttgc 19063469  T
Q  160 tccaggcttccattc 174  Q
    |||| ||||| ||||    
T  19063468 tccaagcttctattc 19063454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 10852067 - 10852128
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| |||||||| ||||||||| |||| |||| |||||||||||||| |||||||||    
T  10852067 tcttgcaacacaagctttctttttgtagattcaattgctctcatttgttctttcagaaccta 10852128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 411
Target Start/End: Original strand, 17697868 - 17697927
Alignment:
Q  352 ttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||| ||||| |||||||||||| |||| |||| ||||||||||||||||| ||||||    
T  17697868 ttgcaacacaaggttcctttttgtagattcaattgctctcatttgttcttccataaccta 17697927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 15647813 - 15647866
Alignment:
Q  111 cagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccag 164  Q
    ||||||||||| |||||| ||| |||||||||||| |||||||| |||||||||    
T  15647813 cagtggataagcatccaaagccatctaattcctcttaaatagtcattgctccag 15647866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 15552187 - 15552239
Alignment:
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccag 164  Q
    |||||||||| || ||| |||||||||||| || |||||||||||||||||||    
T  15552187 agtggataagcattcaaagccttctaattcatccgaaatagtcgttgctccag 15552239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 15903518 - 15903570
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| ||||||||||||||||||||    
T  15903518 caagcttcctttttgttgattccattgctctcttttgttcttccagaacctaa 15903570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 20418478 - 20418559
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacatacaa 433  Q
    |||||||| | |||||||  |||||||||||| |||| |||||||||||||| || |||| | ||||||| ||||||| |||||    
T  20418478 tcttgcaacaaaagcttc--ttttgtaaattccattgctctcatttgttctttcaaaaccaatacttgaattaaagacttacaa 20418559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 49642619 - 49642567
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| ||||||||||||||||||||    
T  49642619 caagcttcctttttgttgattccattgctctcttttgttcttccagaacctaa 49642567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 13932004 - 13932071
Alignment:
Q  116 gataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    |||||| ||| ||||||||||||||||| ||| |||| |||  ||||||| |||||||| ||||||||    
T  13932004 gataagcatctaatgccttctaattcctttgagatagccgtcactccaggtttccattccttctgcaa 13932071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 409
Target Start/End: Complemental strand, 16305060 - 16305004
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacc 409  Q
    ||||||| |||||||||||||  |||||||  |||| ||||||||||||||||||||||    
T  16305060 cttgcaacacaagcttccttt--gtaaattacattgctctcatttgttcttccagaacc 16305004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 18459266 - 18459227
Alignment:
Q  140 tcctctgaaatagtcgttgctccaggcttccattctttct 179  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  18459266 tcctctgaaatagtcgttgttccaggcttccattccttct 18459227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 411
Target Start/End: Complemental strand, 19197700 - 19197657
Alignment:
Q  368 ctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||||||||  |||| ||||||||||||||||||||||||    
T  19197700 ctttttgtaaatttcattgctctcatttgttcttccagaaccta 19197657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 410
Target Start/End: Original strand, 13824353 - 13824403
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
    ||||||||||||||||  |||| |||| |||| ||||||||||||||||||    
T  13824353 caagcttcctttttgttgattccattgctctcttttgttcttccagaacct 13824403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 420
Target Start/End: Original strand, 7477825 - 7477917
Alignment:
Q  327 ttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaac 420  Q
    |||| ||||||||||||||| |||||||||| | |||||||||||    || ||| |||| |||||||||||||| || || | ||||||||||    
T  7477825 ttgtcttcagactctgtcttcaatcttgcaacataagcttcctttgaaaaatttc-attgctctcatttgttctttcataatcaaaacttgaac 7477917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 11513898 - 11513955
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccag 164  Q
    ||||| ||||||||| ||  |||||||| |||||||||| ||||||||||| ||||||    
T  11513898 tcttcggtggataagcatgaaatgccttataattcctcttaaatagtcgttactccag 11513955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 16879981 - 16880034
Alignment:
Q  20 agtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtgg 73  Q
    |||||||| | ||||| ||||||||| |||||| ||||| ||||||||||||||    
T  16879981 agtagtcataactgttgtcttgtactgctgcagccatgatgagtggagtagtgg 16880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 22803941 - 22803889
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| |||||||||| |||||||||    
T  22803941 caagcttcctttttgttgattccattgctctcttttgttcttctagaacctaa 22803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 37467621 - 37467673
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| ||||||||| ||||||||||    
T  37467621 caagcttcctttttgttgattccattgttctcttttgttctttcagaacctaa 37467673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 5e-91; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 21 - 371
Target Start/End: Original strand, 13027739 - 13028099
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggt---------tgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||          ||| ||||| || |||||| ||||  | |||||||||    
T  13027739 gtagtcacagctgttatcttgtactactgtagacatggggagtggagtagtggaggtagtggctgtacaattgtaatatgtcattttcct-gcgctcttc 13027837  T
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattta 211  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  13027838 agtggataagcatccaatgccttctaattcctctgaaatagccgttgctccaggcttccattccttctgcaatgatatgcattcagaataaaaacattta 13027937  T
Q  212 actaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctctt-cagactctctgatgacgtcaatttctggtagacagtttctga 309  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||||| || |||| ||||||||||||||||||||  || |||||||||  ||||||    
T  13027938 actaacttcagcttcccgtcttcagactctgatgaactccagcttctgatggttcttccagactctctgatgacgtcagcttgtggtagacaacttctga 13028037  T
Q  310 tagttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttccttt 371  Q
    | || || ||| ||||||||| ||||||||||||||| | || ||||| |||| ||||||||    
T  13028038 tggtctttagacgctctttgtcttcagactctgtcttcattcatgcaacacaatcttccttt 13028099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 427
Target Start/End: Complemental strand, 16324667 - 16324256
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtgg---------ttgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    ||||||| || |||||||||||||||||| |||||||||||||| ||||||||         |||| | ||| |||| ||||||||    ||||||||||    
T  16324667 gtagtcaaagttgttatcttgtactactgtagacatgaggagtgaagtagtggagatagtggttgtacgattgtactgtgtcctttcc--tgcgctcttc 16324570  T
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattta 211  Q
    | |||||||| || ||||||||||||||||||||||||||||||||| | |||||||| | || |||| |||| ||||||||||| ||||||||| |||     
T  16324569 aatggataagcatacaatgccttctaattcctctgaaatagtcgttgtttcaggcttcaaatccttctacaatgatatgcattcagaataacaacttttg 16324470  T
Q  212 actaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgata 311  Q
    ||||| |||||| ||||||||||||| ||| |||||||| | ||| ||||| |||||||||||||| ||||| |||  || |||||| |||   |||||     
T  16324469 actaatttcagcatccagtcttcagattctgatgaactccaacttttgaggttcttcagactctctaatgacatcagcttttggtaggcagcagctgatg 16324370  T
Q  312 gttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    || |||||||||||||||| ||||||||||||||| | |||||||| |||||||||||||  |  ||||  |||| |||||||||||||| || |||| |    
T  16324369 gtcttcagatgctctttgtcttcagactctgtcttcattcttgcaacacaagcttcctttgag--aatttcattgctctcatttgttctttcaaaaccaa 16324272  T
Q  412 aacttgaactaaagac 427  Q
     | ||||| |||||||    
T  16324271 tatttgaattaaagac 16324256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 21 - 347
Target Start/End: Complemental strand, 14357282 - 14356949
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtg--------gagtagtggttgttcaattatactatgtcctttttgttgcgctcttca 112  Q
    |||| |||| |||||||||||| ||||| |||||||||||||||        ||||||||||||| ||| | ||| || |||||||  | |||||||| |    
T  14357282 gtagacacatctgttatcttgttctactacagacatgaggagtgaagtagtggagtagtggttgtacaaatgtaccatatccttttcct-gcgctcttta 14357184  T
Q  113 gtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaa 212  Q
    ||||||||  |||||||||||||||||||||||||||||| | |||||||||||||| |||| || |||||| || ||  |||| ||||||||| |||||    
T  14357183 gtggataaccatccaatgccttctaattcctctgaaatagacattgctccaggcttctattccttttgcaatgatgtgtcttcagaataacaacttttaa 14357084  T
Q  213 ctaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatag 312  Q
    |||||||||| ||||| |||| |||||||  ||||||  ||||| |||||||||||||| |||||||||||||||| |||||| || ||| |||| ||      
T  14357083 ctaacttcagtttccaatctttagactctgttgaacttcagcttttgaggctcttcagattctctgatgacgtcaacttctggcagtcagcttctaatga 14356984  T
Q  313 ttttcagatgctctttgttttcagactctgtcttg 347  Q
    | |||| |  ||||| |||||||||||||||||||    
T  14356983 tcttcacactctcttagttttcagactctgtcttg 14356949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 20571102 - 20570925
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||||||||||||| ||||| ||||||||||||||| | | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  20571102 agtggagtagtggttgtacaattgtactatgtcctttttct-gtgctcttcagtggataagcatcaaatgccttctaattcctctgaaatagtcgttgct 20571004  T
Q  161 ccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagact 239  Q
    |||| |||| |||| |||| |||| || ||  |||| ||||||||| ||||||||||| ||||||||||||| ||||||    
T  20571003 ccagacttctattccttctacaattatgtgacttcagaataacaacctttaactaactgcagcttccagtctccagact 20570925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 2651789 - 2651987
Alignment:
Q  41 gtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaatt 140  Q
    |||||| |||||||||||| ||||||||||||||||| ||||| ||||||||||||||  |  |||||||||||||||||| || |||||||||||||||    
T  2651789 gtactattgcagacatgag-agtggagtagtggttgtacaattgtactatgtccttttccta-cgctcttcagtggataagcattcaatgccttctaatt 2651886  T
Q  141 cctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactc 240  Q
    ||||||||||||||||| ||||| ||||| |||| || |||||| || ||  |||| ||||||||  ||||||||||| || |||| |||||||||||||    
T  2651887 cctctgaaatagtcgttactccaagcttctattccttttgcaatgatgtgtcttcagaataacaaactttaactaactgcaacttctagtcttcagactc 2651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 32 - 214
Target Start/End: Original strand, 18774028 - 18774209
Alignment:
Q  32 tgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgc 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| | ||||  ||||||||| |||||||||| ||| |||||    
T  18774028 tgttatcttgtactactgcagacatgaagagtggagtagtggttgtacaattgtattatgttc-ttttcctgcgctcttaagtggataagcatctaatgc 18774126  T
Q  132 cttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaact 214  Q
    |||||||||||||  ||||||| ||||||| |||| || |||| ||||||||| || |   |||||||||||||| |||||||    
T  18774127 cttctaattcctcctaaatagttgttgctctaggcatctattccttctgcaatgatgtttcttcataataacaacttttaact 18774209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 38 - 241
Target Start/End: Complemental strand, 14902584 - 14902385
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttcta 137  Q
    ||||||||| |||||| |||| |||||||||||||||||| ||||| ||||||||| ||||    |||||||| |||||| ||| || || |||||||||    
T  14902584 cttgtactattgcagatatgaagagtggagtagtggttgtacaattgtactatgtcattttca--gcgctctttagtggagaagcattcactgccttcta 14902487  T
Q  138 attcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcaga 237  Q
    |||||||| ||||||||||||||||| ||||| |||| ||||||||| |||||  |  | ||||||||   ||||||||||||||||||  ||||||| |    
T  14902486 attcctctaaaatagtcgttgctccaagcttctattccttctgcaatgatatg--tcaagaataacaaacattaactaacttcagcttcttgtcttcata 14902389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 20577293 - 20577414
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||||||||||||| ||||| |||||| |||  |||   || ||||||| |||||||| |||||||||||||||||| ||||||||||| | |||||    
T  20577293 agtggagtagtggttgtgcaattgtactatttcccatttaccgcactcttcattggataagaatccaatgccttctaatttctctgaaatagccattgct 20577392  T
Q  161 ccaggcttccattctttctgca 182  Q
     |||||||| |||  |||||||    
T  20577393 tcaggcttctatttcttctgca 20577414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 18394543 - 18394665
Alignment:
Q  63 tggagtagtggttgttcaattatactat--gtcctttttgttgcgctc-ttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    ||||||||||||||| ||||| ||||||  ||||||| | | |||||| |||||||||||||  || |||||||| ||||||||||||||| ||||||||    
T  18394543 tggagtagtggttgtacaattgtactatttgtcctttctct-gcgctccttcagtggataagcctcaaatgccttataattcctctgaaatggtcgttgc 18394641  T
Q  160 tccaggcttccattctttctgcaa 183  Q
    ||||| |||| |||| || |||||    
T  18394642 tccagacttctattccttatgcaa 18394665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 17812351 - 17812296
Alignment:
Q  108 cttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctcca 163  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  17812351 cttcagcggataagcatccaatgccttctaattcctctgaaatagccgttgctcca 17812296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 19889145 - 19889020
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagta---------gtggttgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||         |||||||| ||||  |||||||||| ||||  |||||||| |    
T  19889145 gtagtcacaactgttatcttgtactaatggagacatgaggagtggagtagtggaggtagtggttgtacaatcgtactatgtcc-ttttcctgcgctctcc 19889047  T
Q  112 agtggataagtatccaatgccttctaa 138  Q
    |||||||||  ||||||||||||||||    
T  19889046 agtggataaacatccaatgccttctaa 19889020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 11901529 - 11901580
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  11901529 caagcttcctttttgttaattccattgttctcatttgttcttccagaaccta 11901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 10250126 - 10250184
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacc 409  Q
    |||||||  |||||||||||||| ||||||| |||| ||||||||||||||| ||||||    
T  10250126 cttgcaactcaagcttcctttttttaaattccattgctctcatttgttcttctagaacc 10250184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 12810994 - 12810941
Alignment:
Q  358 tacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    ||||||||||||||||||  |||| |||| |||| |||||||||||||||||||    
T  12810994 tacaagcttcctttttgttgattccattgctctcttttgttcttccagaaccta 12810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 21350517 - 21350476
Alignment:
Q  246 aactctagcttctgaggctcttcagactctctgatgacgtca 287  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  21350517 aactccagcttctaaggctcttcagactctctgatgacgtca 21350476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Original strand, 17540732 - 17540783
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    ||||||||||| ||||  |||| |||| ||||||||||||||||||||||||    
T  17540732 caagcttccttcttgttgattccattgctctcatttgttcttccagaaccta 17540783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 18776147 - 18776216
Alignment:
Q  210 taactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctga 279  Q
    ||||||||| ||||||||| |||||||||||| ||||| |  ||||||||| | | || |||||||||||    
T  18776147 taactaactgcagcttccaatcttcagactctaatgaatttcagcttctgatgatttttagactctctga 18776216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 6641994 - 6642050
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaactt 416  Q
    ||||||||||| ||||  | || |||| |||||||||||||||||||||||| ||||    
T  6641994 caagcttccttcttgttgactccattgctctcatttgttcttccagaacctatactt 6642050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 16632752 - 16632804
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  |||| |||| |||| |||||| |||||||||||||    
T  16632752 caagcttcctttttgttgattccattgctctcttttgtttttccagaacctaa 16632804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 7e-90; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 21 - 429
Target Start/End: Complemental strand, 23006229 - 23005815
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataa 120  Q
    ||||||||| ||||| |||||||||| ||||||||  |||||||||||||||||||| ||||| ||||||||| ||||| |||| ||||||| |||||||    
T  23006229 gtagtcacatctgttgtcttgtactattgcagacacaaggagtggagtagtggttgtacaattgtactatgtc-tttttcttgcactcttcaatggataa 23006131  T
Q  121 gtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttc 220  Q
    | ||| ||||||||||||||||||||||||||||||| ||| |||||||||| | || |||||||||||||||||| |||||||||||||||||||||||    
T  23006130 gcatctaatgccttctaattcctctgaaatagtcgttcctctaggcttccataccttttgcaatcatatgcattcagaataacaacatttaactaacttc 23006031  T
Q  221 agcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcag 319  Q
    |||||| |||||  ||||||   ||||||| ||||| ||| || | || ||||||| |||||||||||  ||||||| ||||  |||||||||| |||||    
T  23006030 agcttctagtctctagactc---tgaactccagcttttgatggttatttagactctttgatgacgtcagcttctggtcgacaacttctgatagtgttcag 23005934  T
Q  320 atgctctttgttttcagactctg---tcttga------atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
    |  ||| |||| |||||||||||   |||| |      ||||||||| |||||||| |||||||||||||| |||| |||||| |||||||||||| |||    
T  23005933 acactccttgtcttcagactctgccttcttcaaactctatcttgcaacacaagctttctttttgtaaattccattgctctcatgtgttcttccagatcct 23005834  T
Q  411 aaacttgaactaaagacat 429  Q
    | ||||||| |||||||||    
T  23005833 atacttgaattaaagacat 23005815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 21 - 429
Target Start/End: Original strand, 23782137 - 23782551
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataa 120  Q
    ||||||||| ||||| |||||||||| ||||||||  |||||||||||||||||||| ||||| ||||||||| ||||| |||| ||||||| |||||||    
T  23782137 gtagtcacatctgttgtcttgtactattgcagacacaaggagtggagtagtggttgtacaattgtactatgtc-tttttcttgcactcttcaatggataa 23782235  T
Q  121 gtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttc 220  Q
    | ||| ||||||||||||||||||||||||||||||| ||| |||||||||| | || |||||||||||||||||| |||||||||||||||||||||||    
T  23782236 gcatctaatgccttctaattcctctgaaatagtcgttcctctaggcttccataccttttgcaatcatatgcattcagaataacaacatttaactaacttc 23782335  T
Q  221 agcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcag 319  Q
    |||||| |||||  ||||||   ||||||| ||||| ||| || | || ||||||| |||||||||||  ||||||| ||||  |||||||||| |||||    
T  23782336 agcttctagtctctagactc---tgaactccagcttttgatggttatttagactctttgatgacgtcagcttctggtcgacaacttctgatagtgttcag 23782432  T
Q  320 atgctctttgttttcagactctg---tcttga------atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
    |  ||| |||| |||||||||||   |||| |      ||||||||| |||||||| |||||||||||||| |||| |||||| |||||||||||| |||    
T  23782433 acactccttgtcttcagactctgccttcttcaaactctatcttgcaacacaagctttctttttgtaaattccattgctctcatgtgttcttccagatcct 23782532  T
Q  411 aaacttgaactaaagacat 429  Q
    | ||||||| |||||||||    
T  23782533 atacttgaattaaagacat 23782551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 67 - 429
Target Start/End: Complemental strand, 18172160 - 18171793
Alignment:
Q  67 gtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggc 166  Q
    ||||||||||| ||||| ||||||||||||||  | ||  |||||| |||||||| ||  |||| |||||||||||||||||||||||||||||| ||||    
T  18172160 gtagtggttgtacaattgtactatgtccttttcct-gcagtcttcaatggataagcatttaatgtcttctaattcctctgaaatagtcgttgctctaggc 18172062  T
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctc 265  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||| ||| |||||||| ||||| ||| || |     
T  18172061 ttccataccttctgcaatcatatgcattcagaataacaacatttaactaacttcagctttcagtctccagattctaatgaactccagcttttgatggtta 18171962  T
Q  266 ttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttcagactctg---tcttga------atcttgca 356  Q
    |||| |||||||||||||||||  |||| |||||||  ||||||||    ||||| | ||||||| |||||||||||   |||| |      || || ||    
T  18171961 ttcacactctctgatgacgtcagcttctagtagacaacttctgata----tcagacgttctttgtcttcagactctgccttcttcagactctatatttca 18171866  T
Q  357 atacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacat 429  Q
    | |||||||| |||||||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  18171865 acacaagcttgctttttgtaaattccattgctcttatttgttcttccagaacctatacttgaattaaagacat 18171793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 429
Target Start/End: Complemental strand, 24718924 - 24718528
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggt---------tgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||||||||          ||| ||||| ||||||||||||||  | || ||||||    
T  24718924 gtagtcacaactgttgtcttgtactattgcagacatgaggagtggagtagtggaggtagtggctgtacaattgtactatgtccttttcct-gcactcttc 24718826  T
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattta 211  Q
    |||||||||| ||||||||||||||||||  | |||||||| || ||| | ||||||||||||  || ||||||||||||||||| || || ||||||||    
T  24718825 agtggataagcatccaatgccttctaattattttgaaatagccgctgcactaggcttccattccatcagcaatcatatgcattcagaaaaagaacattta 24718726  T
Q  212 actaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgat 310  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| | || |||||||||||||||||||||||||               |||||||    
T  24718725 actaacttcagcttacagtcttcagactctgatgaactccagcttctaatggttcttcagactctctgatgacgtcaa--------------cttctgat 24718640  T
Q  311 agttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacct 410  Q
     |||||| || | | ||||| |||| |||||       ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  24718639 ggttttctgacgttgtttgtcttcatactct-------atcttgcaacacaagcttcctttttgtaaattttattgctctcatttgttcttccagaacct 24718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 21 - 294
Target Start/End: Complemental strand, 24728728 - 24728465
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataa 120  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| ||||  ||| |||||||||||||||    
T  24728728 gtagtcacaactgttgtcttgtactattgcagacatgaggagtggagtagtggttgtacaattgtactatgtcc-ttttcctgcactcttcagtggataa 24728630  T
Q  121 gtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttc 220  Q
    | |||||||||||||||||||||||||||||| | |||| | ||| |||||||| |||          |||||||| || || |||||||||||||||||    
T  24728629 gcatccaatgccttctaattcctctgaaatagccattgcactaggtttccattccttc----------tgcattcagaaaaagaacatttaactaacttc 24728540  T
Q  221 agcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctg 294  Q
    ||||||||||||||||||||| |||||||| ||||||||| || |||| |||||||||||||||||||| |||||    
T  24728539 agcttccagtcttcagactctgatgaactccagcttctgatggttcttgagactctctgatgacgtcaacttctg 24728465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 38 - 294
Target Start/End: Complemental strand, 10704706 - 10704462
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttcta 137  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||| |||||||  | |||||||| ||||||||| || ||||| ||||||    
T  10704706 cttgtactattgcagacatgaagagtggagtagtggttgtacaattgtactatgccctttttcctacgctcttcggtggataagcattcaatgtcttcta 10704607  T
Q  138 attcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcaga 237  Q
    |||||| | ||||||||||||||| ||||||| |||| |            ||  |||| ||||||||  ||||||||||| ||||||||||||||||||    
T  10704606 attcctttaaaatagtcgttgctctaggcttctattcct------------tgtcttcaaaataacaaactttaactaactgcagcttccagtcttcaga 10704519  T
Q  238 ctctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctg 294  Q
    || | |||||||  |||||||| || |||||||||||||||||||||||| ||||||    
T  10704518 ctttgatgaacttcagcttctggggatcttcagactctctgatgacgtcagtttctg 10704462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 25 - 226
Target Start/End: Original strand, 19875804 - 19876013
Alignment:
Q  25 tcacagctgttatcttgtactactgcagacatgaggagtggagtag---------tggttgttcaattatactatgtcctttttgttgcgctcttcagtg 115  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||         ||||||| ||||| |||||| ||||||||   |||||||| ||||    
T  19875804 tcacacctgttgtcttgtactactgcagacatgaggagtggagtagtggaggtagtggttgtacaattgtactatatcctttttcgagcgctctttagtg 19875903  T
Q  116 gataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaacta 215  Q
    |||||| ||||| |||||| ||||||||||||||||| | || |||||| ||||| ||| ||||||||||||||||||| | ||||||||||||||||||    
T  19875904 gataagcatccattgccttgtaattcctctgaaatagccattactccagacttccgttccttctgcaatcatatgcatt-agaataacaacatttaacta 19876002  T
Q  216 acttcagcttc 226  Q
    |||||||||||    
T  19876003 acttcagcttc 19876013  T

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Target: chr6; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 25 - 235
Target Start/End: Complemental strand, 16462828 - 16462610
Alignment:
Q  25 tcacagctgttatcttgtactactgcagacatgaggagtggagta---------gtggttgttcaattatactatgtcctttttgttgcgctcttcagtg 115  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||         |||||||| ||||| ||||||||||||||  | ||||||| |||||    
T  16462828 tcacaactgttgtcttgtactattgcagacatgaggagtggagtattggatgtagtggttgtacaattgtactatgtccttttcct-gcgctctccagtg 16462730  T
Q  116 gataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaacta 215  Q
    |||||| ||||||||||||| |||||||||||  ||| |||| ||||||||||| |||| ||||| ||| || | |||||| |||||||| |||||||||    
T  16462729 gataagcatccaatgccttcaaattcctctgatttagccgtttctccaggcttctattccttctgtaatgatgtccattcagaataacaaaatttaacta 16462630  T
Q  216 acttcagcttccagtcttca 235  Q
    ||||||||||||| ||||||    
T  16462629 acttcagcttccaatcttca 16462610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 51 - 233
Target Start/End: Original strand, 32335826 - 32336007
Alignment:
Q  51 agacatgaggagtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaa 149  Q
    |||||||  |||||||||||||||||| ||||| |||||| ||||| ||    | ||||||||||||||||| ||| ||| ||||| ||||| |||||||    
T  32335826 agacatggtgagtggagtagtggttgtacaattgtactatcgtcctattcca-gagctcttcagtggataagcatctaatcccttcaaattcttctgaaa 32335924  T
Q  150 tagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtctt 233  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| | |||| ||||||||||||||||| |||||| ||||||    
T  32335925 tagtcgttgctccaggcttccattccttctgcaatcataagcatt-agaatatcaacatttaactaacttgagcttctagtctt 32336007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 14325413 - 14325283
Alignment:
Q  158 gctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttc 257  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||| |||||||    
T  14325413 gctccaggcttccattcattctgcaatcatatgtattcagaataacaacatttaactaacttcagcttctagtcttcagactttgatgaactttagcttc 14325314  T
Q  258 tga-ggctcttcagactctctgatgacgtca 287  Q
    ||| || |||| ||||| |||||||| ||||    
T  14325313 tgatggttctttagactttctgatgatgtca 14325283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 14418423 - 14418293
Alignment:
Q  158 gctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttc 257  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||| |||||||    
T  14418423 gctccaggcttccattcattctgcaatcatatgtattcagaataacaacatttaactaacttcagcttctagtcttcagactttgatgaactttagcttc 14418324  T
Q  258 tga-ggctcttcagactctctgatgacgtca 287  Q
    ||| || |||| ||||| |||||||| ||||    
T  14418323 tgatggttctttagactttctgatgatgtca 14418293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 17445758 - 17445620
Alignment:
Q  95 tttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcatt 194  Q
    ||||| |||| |||||||| |||| || || ||||| ||||||||||||||||||||||||||||||||||||  ||||| |||| |||| ||  |||||    
T  17445758 ttttttttgcactcttcagcggatcagcattcaatgtcttctaattcctctgaaatagtcgttgctccaggctctcattccttctccaatgatgagcatt 17445659  T
Q  195 cataataacaacatttaactaacttcagcttccagtctt 233  Q
    || ||||||||||||||||||||||||||||||||||||    
T  17445658 caaaataacaacatttaactaacttcagcttccagtctt 17445620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 226
Target Start/End: Original strand, 24398652 - 24398838
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttcta 137  Q
    ||||| ||| |||||||||||| ||||||||||||||||| ||| | |||||| |||||||  | |||||| |||||||||||| |||||||||||||||    
T  24398652 cttgtgctattgcagacatgag-agtggagtagtggttgtacaactgtactatatccttttcat-gcgctcatcagtggataagcatccaatgccttcta 24398749  T
Q  138 attcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttc 226  Q
    |||||| | ||||||||||||||||||||||| || | ||||||||| || ||  || | ||||||||  ||||||||||| |||||||    
T  24398750 attcctttaaaatagtcgttgctccaggcttctataccttctgcaatgatgtgtcttgagaataacaaactttaactaactgcagcttc 24398838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 51 - 347
Target Start/End: Original strand, 13145137 - 13145433
Alignment:
Q  51 agacatgaggagtggagtagtggttgttcaattatactat--gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaa 148  Q
    |||||||| |||| ||||||||||||| ||||| ||||||  ||||||||  |  | ||||| |||||||||| || |||||||||||||||| ||||||    
T  13145137 agacatgaagagtagagtagtggttgtacaattgtactatatgtccttttctt--ctctctttagtggataagcattcaatgccttctaattcatctgaa 13145234  T
Q  149 atagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccag-tcttcagactctcatgaa 247  Q
    |||||||||||  |||||||| |||| ||||||||| || ||  || | |  |||||  ||||| ||||  |||||||||| |||||||||||| |||||    
T  13145235 atagtcgttgcatcaggcttctattccttctgcaatgatgtgtctttagagaaacaaactttaagtaacagcagcttccagttcttcagactctaatgaa 13145334  T
Q  248 ctctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttcagactctgtcttg 347  Q
    ||  ||||||||||| |||| |||| || |||||||||||  |||||| || ||| ||||||| || |||| |  || || || ||||||||||||||||    
T  13145335 cttcagcttctgaggatctttagacgct-tgatgacgtcagcttctggcagtcagcttctgatggtcttcaaactctgttagtcttcagactctgtcttg 13145433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 17867539 - 17867661
Alignment:
Q  20 agtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggata 119  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||||| ||||  ||||| |||||||||| |||   ||||||||||||||||||    
T  17867539 agtagacacagttgttatcttgtactactgccgacatgaggagtggagtagtagttgcacaattgtactatgtcc-tttccctgcgctcttcagtggata 17867637  T
Q  120 agtatccaatgccttctaattcct 143  Q
    || |||||||||||||||||||||    
T  17867638 agcatccaatgccttctaattcct 17867661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 17877322 - 17877444
Alignment:
Q  20 agtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggata 119  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||||| ||||  ||||| |||||||||| |||   ||||||||||||||||||    
T  17877322 agtagacacagttgttatcttgtactactgccgacatgaggagtggagtagtagttgcacaattgtactatgtcc-tttccctgcgctcttcagtggata 17877420  T
Q  120 agtatccaatgccttctaattcct 143  Q
    || |||||||||||||||||||||    
T  17877421 agcatccaatgccttctaattcct 17877444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 18026895 - 18026778
Alignment:
Q  67 gtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccagg 165  Q
    ||||||||||| ||||| |||||| ||||||| | |  |  ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  18026895 gtagtggttgtacaattgtactattgtcctttctttgtccatcttcagtggataagcatccaatgccttctaattcctctgaaatagttgttgctccagg 18026796  T
Q  166 cttccattctttctgcaa 183  Q
    |||| | || ||||||||    
T  18026795 cttctactccttctgcaa 18026778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 218
Target Start/End: Original strand, 21035011 - 21035167
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||| ||||||||| ||||| |||| |  || ||||  |||| |||| |||| ||||| ||||||||| ||| ||||||| |||| |||||||||||    
T  21035011 agtggagcagtggttgtacaattgtactgttacccttttcctgcgttctttagtgaataagcatccaatgctttcaaattcctatgaattagtcgttgct 21035110  T
Q  161 ccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaact 218  Q
    ||| |||||||||| ||||||||||||| ||| | | |||||||||||||||| ||||    
T  21035111 ccaagcttccattccttctgcaatcataagca-tgagaataacaacatttaacaaact 21035167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 429
Target Start/End: Complemental strand, 24728407 - 24728327
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacat 429  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||| |||||||||    
T  24728407 atcttgcaacacaagcttcctttttgtaaattttattgctctcatttgttcttccacaacctatacttgaattaaagacat 24728327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 247
Target Start/End: Complemental strand, 31127467 - 31127290
Alignment:
Q  69 agtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggctt 168  Q
    ||||||||| |||||||||||| |  | |||  ||||||||||||||| |||| |||||||||||| ||||||||||||||||  ||||| |||||||||    
T  31127467 agtggttgtacaattatactat-tgttctttcatgcgctcttcagtggttaagcatccaatgccttataattcctctgaaatatacgttgttccaggctt 31127369  T
Q  169 ccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaa 247  Q
    | |||| || ||||||||| ||  |||| |||||| |  ||||||||||| ||| |||  | ||||| ||||| |||||    
T  31127368 ctattccttttgcaatcatgtgtcttcaaaataaccaactttaactaactccagattcttgacttcatactctgatgaa 31127290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 425
Target Start/End: Original strand, 9192688 - 9192871
Alignment:
Q  252 agcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttcagactctgtctt---- 346  Q
    ||||||||| || |||| |||||||||||||||||||  |||||||| |||| ||||||| || |||||| ||||||||| |||||||| ||||||        
T  9192688 agcttctgatggttctttagactctctgatgacgtcagcttctggtacacagcttctgatggtcttcagacgctctttgtcttcagactttgtcttcttc 9192787  T
Q  347 -ga----atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaag 425  Q
     ||    ||||| ||| ||||| ||||||||||||||||  |||| |||||||||||| | || |||||| ||||||| |||||    
T  9192788 agattctatcttacaacacaagtttcctttttgtaaatttcattgctctcatttgttccttcaaaacctatacttgaattaaag 9192871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 38 - 308
Target Start/End: Original strand, 23231170 - 23231443
Alignment:
Q  38 cttgtactactgcagacatgaggagtggagtagtgg----ttg-ttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgcc 132  Q
    ||||||||| ||||||||||| || |||||||||||    ||| ||  ||| ||||||||||||||  | ||||||||| ||||||||| ||||||||||    
T  23231170 cttgtactattgcagacatgaagaatggagtagtggagtattgattggattgtactatgtccttttcct-gcgctcttccgtggataagcatccaatgcc 23231268  T
Q  133 ttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtct 232  Q
    |||||||| ||||||||||    ||||| |||||||  |||| |||| |  | |||||  || | ||||||||  ||||||||||| || ||   |||||    
T  23231269 ttctaatttctctgaaatatcaattgcttcaggcttttattcattctacggtgatatgtctttagaataacaaactttaactaactacaactattagtct 23231368  T
Q  233 tcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctg 308  Q
    ||||||||| |||||||  ||||||| ||  ||||||||| || |||||||||||  |||||| || ||| |||||    
T  23231369 tcagactctgatgaacttcagcttcttagaatcttcagacgct-tgatgacgtcagcttctggcagtcagcttctg 23231443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 17445544 - 17445464
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaa-ttctattgatctcatttgttcttccagaacctaaacttgaactaaagacat 429  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||  |||||| | |||||||    
T  17445544 tcttgcaacacaagcttcctttttgtaaaattctattgctctcatttgttcttccagaacatatgcttgaattcaagacat 17445464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 7812072 - 7812202
Alignment:
Q  106 ctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaa 205  Q
    |||||| ||| ||||| ||||||||||||  |||||||||||| |||||||||||| | ||||| |||| ||||||| | ||    | ||| ||| ||||    
T  7812072 ctcttcggtgaataagcatccaatgcctttaaattcctctgaattagtcgttgctcaaagcttctattccttctgcatttatgcaaaatcagaatgacaa 7812171  T
Q  206 catttaactaacttcagcttccagtcttcag 236  Q
    |||||||||||||| || ||||| |||||||    
T  7812172 catttaactaactttagtttccattcttcag 7812202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 30451669 - 30451556
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    ||||||||| |||||||  |||| |||||| || |||||| | ||||||||||||||||||| ||||||||||||| |||| || |||||||  |||| |    
T  30451669 agtggagtactggttgtataattgtactattgttctttttct-gcgctcttcagtggataagcatccaatgccttcaaatttctatgaaataaccgttac 30451571  T
Q  160 tccaggcttccattc 174  Q
    | |||||||||||||    
T  30451570 ttcaggcttccattc 30451556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 7812304 - 7812365
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| |||||||||||||||||| |||| |||| | ||||||||||||||||||||||    
T  7812304 tcttgcaacacaagcttcctttttgtagattcaattgctttcatttgttcttccagaaccta 7812365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 25930533 - 25930622
Alignment:
Q  104 cgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcat 193  Q
    |||||||||  | ||||| |||||||| |||| |||||||||||| ||| |||||||||||||||| |||| ||||||||| ||| ||||    
T  25930533 cgctcttcaaggaataagcatccaatgacttcaaattcctctgaattagccgttgctccaggcttctattccttctgcaatgataggcat 25930622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 14325221 - 14325149
Alignment:
Q  332 ttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttcca 404  Q
    ||||||||||||||| | |||||||| || |||||||||||| ||||||| |||| ||||||||| |||||||    
T  14325221 ttcagactctgtcttcattcttgcaacactagcttcctttttttaaattccattgctctcatttgatcttcca 14325149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 14418231 - 14418159
Alignment:
Q  332 ttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttcca 404  Q
    ||||||||||||||| | |||||||| || |||||||||||| ||||||| |||| ||||||||| |||||||    
T  14418231 ttcagactctgtcttcattcttgcaacactagcttcctttttttaaattccattgctctcatttgatcttcca 14418159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 411
Target Start/End: Complemental strand, 16462493 - 16462431
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||| || || |||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  16462493 atcttgtaacacgagcttcctttttgtaaattccattcctctcatttgttcttccagaaccta 16462431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 25592828 - 25592886
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaac 408  Q
    |||| ||| |||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  25592828 tctttcaacacaagcttcctttttgtagattccattgctctcatttgttcttccagaac 25592886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 426
Target Start/End: Original strand, 32336081 - 32336155
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaaga 426  Q
    |||||||| |||||||||||||  |||||||| |||| |||||||| |||||||||||||||  ||||| |||||||    
T  32336081 tcttgcaacacaagcttccttt--gtaaattccattgctctcattttttcttccagaacctatgcttgatctaaaga 32336155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 26185727 - 26185829
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    |||||| |||||||||| ||||  |||||| ||||||||| | || ||||| |||||||||| ||| ||||||||||||||| |||||||||| |||||     
T  26185727 agtggaatagtggttgtacaatg-tactattgtcctttttct-gcactctttagtggataagcatctaatgccttctaattcatctgaaatagccgttgt 26185824  T
Q  160 tccag 164  Q
    |||||    
T  26185825 tccag 26185829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 21035312 - 21035363
Alignment:
Q  358 tacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacc 409  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||| ||||    
T  21035312 tacaagctccctttttgtaaattctattgctctcgtttgttcttccaaaacc 21035363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 23298019 - 23298120
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaa 216  Q
    ||||| ||| |||| |||| ||||||| |||||||| | ||||||||| |||  |||| ||||||||| ||| ||||  |||||||||||||||||| ||    
T  23298019 ataagaatcaaatgtcttccaattcctatgaaatagccattgctccagacttttattccttctgcaatgataggcata-ataataacaacatttaacaaa 23298117  T
Q  217 ctt 219  Q
    |||    
T  23298118 ctt 23298120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 25595953 - 25596018
Alignment:
Q  118 taagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    |||| ||| ||||| ||||||||||| |||||||||||||||||||| |||| |||| || |||||    
T  25595953 taagcatcaaatgcattctaattcctttgaaatagtcgttgctccagacttctattccttatgcaa 25596018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 17928108 - 17928167
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    ||||||| |||||||||||||||||  | ||||||| |||||||||||||| |||||||||    
T  17928108 cttgcaacacaagcttcctttttgttgaatctattgctctcatttgttctt-cagaaccta 17928167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 23298251 - 23298310
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||  ||||||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  23298251 cttgcaactcaagcttcctttttgtagattccattgctctcatttgttctt-cagaaccta 23298310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 14100302 - 14100251
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    ||||||||||||||||  |||| |||| |||| |||||||||||||||||||    
T  14100302 caagcttcctttttgttgattccattgctctcttttgttcttccagaaccta 14100251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 19625881 - 19625940
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctt 176  Q
    ||||| || |||||||||| ||||||||| | |||| |||||||||| ||||||||||||    
T  19625881 ataagcattcaatgccttcaaattcctctaatatagccgttgctccaagcttccattctt 19625940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 19876095 - 19876154
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaac 408  Q
    ||||||||| | |||||||||| ||||||| || |||  |||||||||||||||||||||    
T  19876095 atcttgcaacagaagcttccttcttgtaaaatccatttctctcatttgttcttccagaac 19876154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 12348165 - 12348243
Alignment:
Q  115 ggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcat 193  Q
    ||||||| |||||||| |||| ||||||| |||| ||| | |||||||||||||| |||| || |||||| ||| ||||    
T  12348165 ggataagcatccaatgacttcaaattcctatgaattagccattgctccaggcttctattccttttgcaatgataggcat 12348243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 428
Target Start/End: Original strand, 12348426 - 12348503
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagaca 428  Q
    |||||||  |||||||||||||| || |||  |||| ||||||||||||||| ||||||||  |||||  ||||||||    
T  12348426 cttgcaactcaagcttcctttttctagatttcattgctctcatttgttcttcgagaacctatgcttgatttaaagaca 12348503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 17927862 - 17927957
Alignment:
Q  117 ataagtatccaatgccttctaa-ttcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaac 213  Q
    ||||| ||||||||||||| || ||| | |||| ||| ||||||| ||||||||||||| ||||||||| ||| ||  | ||||||||||||||||||    
T  17927862 ataagcatccaatgccttcaaaattcttttgaattagccgttgcttcaggcttccattc-ttctgcaatgataggc-gtgataataacaacatttaac 17927957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 21 - 418
Target Start/End: Complemental strand, 17917015 - 17916611
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtgg---------ttgttcaattatactatgtcctttttgttgcgctcttc 111  Q
    ||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||         |||| ||||| ||||||||| ||||  | | ||||||     
T  17917015 gtagtcacaactgatatcttgtattactgcagacaagaggagtggagtagtggaggcagtgattgtacaattgtactatgtcattttcct-gtgctcttt 17916917  T
Q  112 agtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattta 211  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| || | |||| | ||||||||| ||||    
T  17916916 agtggataagcttccaatgccttctaattcctctaaaatagtcgttgctccaggcttccattccttctgcaatgatttacattaagaataacaactttta 17916817  T
Q  212 actaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagacagtttctgata 311  Q
    ||||| | || |||||| |||||||||||| |||||||| ||||||||| | |||| |||||||||||||||||||  ||||||||||||  |||||||     
T  17916816 actaattccaacttccaatcttcagactctgatgaactccagcttctgacggtctttagactctctgatgacgtcagcttctggtagacaacttctgatg 17916717  T
Q  312 gttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    || |||||| ||||||||| | || |||||||||| | |||||||  |||||||||| |||||||||||  |||| |||||||||||||| |||||| ||    
T  17916716 gtcttcagacgctctttgtctccatactctgtcttcattcttgcagcacaagcttcc-ttttgtaaatttcattgctctcatttgttctttcagaacata 17916618  T
Q  412 aacttga 418  Q
     ||||||    
T  17916617 tacttga 17916611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 18558039 - 18558203
Alignment:
Q  71 tggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttcc 170  Q
    ||||||| ||||| ||||||||||||||  | || |||||||||||||||  |||||||||||||||||| |||||| ||||||||||||| ||||||      
T  18558039 tggttgtacaattgtactatgtccttttcct-gcactcttcagtggataaacatccaatgccttctaatttctctgatatagtcgttgctctaggcttat 18558137  T
Q  171 attctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcag 236  Q
    |||| ||||||||| || |||| ||| ||  || | ||||||||||||||||||||||||||||||    
T  18558138 attccttctgcaatgatgtgcaatcaaaaggacgatatttaactaacttcagcttccagtcttcag 18558203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 12193951 - 12194118
Alignment:
Q  102 tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataata 201  Q
    ||||||||||| |||| ||| ||||||||||||| ||||| ||||||||||| |||| |||||||||| ||||  ||| |||| || ||  |||| ||||    
T  12193951 tgcgctcttcaatggacaagcatccaatgccttccaattcttctgaaatagttgttgttccaggcttctattccctctacaatgatgtgtcttcagaata 12194050  T
Q  202 acaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttca 269  Q
    ||||  |||||||||||  || |||||||||||| ||||| |||||||  ||||||||||| ||||||    
T  12194051 acaaactttaactaactgtagtttccagtcttcaaactctgatgaacttcagcttctgaggatcttca 12194118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 12438379 - 12438546
Alignment:
Q  102 tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataata 201  Q
    ||||||||||| |||| ||| ||||||||||||| ||||| ||||||||||| |||| |||||||||| ||||  ||| |||| || ||  |||| ||||    
T  12438379 tgcgctcttcaatggacaagcatccaatgccttccaattcttctgaaatagttgttgttccaggcttctattccctctacaatgatgtgtcttcagaata 12438478  T
Q  202 acaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttca 269  Q
    ||||  |||||||||||  || |||||||||||| ||||| |||||||  ||||||||||| ||||||    
T  12438479 acaaactttaactaactgtagtttccagtcttcaaactctgatgaacttcagcttctgaggatcttca 12438546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 26833350 - 26833429
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacat 429  Q
    |||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||  |||||| |||||||||    
T  26833350 tcttgcaacacaagcctcctttttgtagattctattgctctcatttgttcttccagaacctatgcttgaattaaagacat 26833429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 19505584 - 19505463
Alignment:
Q  61 agtggagtagtggttgttcaattatactat-gtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    ||||||||||||||||| ||||| |||||| |||||||    || |||||  ||||| |||| || ||||||||||||||||||||||||||| ||||||    
T  19505584 agtggagtagtggttgtacaattgtactattgtcctttca--tgagctctatagtgggtaagcattcaatgccttctaattcctctgaaatagccgttgc 19505487  T
Q  160 tccaggcttccattctttctgcaa 183  Q
    || ||| ||| |||| ||||||||    
T  19505486 tcgaggattctattccttctgcaa 19505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 12541699 - 12541759
Alignment:
Q  123 atccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||  ||||||||    
T  12541699 atccaatgccttctaattcctctaaaatagtcgtttctccaggcttctatttcttctgcaa 12541759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 18772685 - 18772744
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctt 176  Q
    ||||| ||||||||||||| |||||||||||  ||||||||||||||||| |||||||||    
T  18772685 ataagcatccaatgccttcaaattcctctgatttagtcgttgctccaggcatccattctt 18772744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 23772669 - 23772729
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| |||||||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  23772669 tcttgcaacacaagcttcctttttgtagattccattgctctcatttgttctt-cagaaccta 23772729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 241
Target Start/End: Complemental strand, 1208708 - 1208590
Alignment:
Q  123 atccaatgccttctaattcctctgaaatagtcgtt-gctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttca 221  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||| |||| |||| ||| | | ||  |||| |||||| | |||||||||||| ||    
T  1208708 atccaatgccttcaaattcctctgaaatagtcgttggccccaggcttctattccttctacaaacttgtgtcttca-aataaccaaatttaactaactcca 1208610  T
Q  222 gcttccagtcttcagactct 241  Q
    | |||  | |||||||||||    
T  1208609 ggttcttgacttcagactct 1208590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 23772455 - 23772499
Alignment:
Q  137 aattcctctgaaatagtcgttgctccaggcttccattctttctgc 181  Q
    |||||||||||| |||||||||||||||||||| |||| ||||||    
T  23772455 aattcctctgaattagtcgttgctccaggcttcaattccttctgc 23772499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 17267783 - 17267835
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  ||||  ||| |||| ||||||||||||||||||||    
T  17267783 caagcttcctttttgttgattcctttgctctcttttgttcttccagaacctaa 17267835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 19707814 - 19707870
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaactt 416  Q
    ||||||||||||||||  |||| ||||  |||||||||||||||| |||||| ||||    
T  19707814 caagcttcctttttgttgattccattgccctcatttgttcttccataacctatactt 19707870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 157; Significance: 3e-83; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 67 - 441
Target Start/End: Complemental strand, 969 - 609
Alignment:
Q  67 gtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggc 166  Q
    ||||||||||| ||||| ||||||| ||||||  | | ||||||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||| ||    
T  969 gtagtggttgtacaattgtactatgcccttttcat-gtgctcttcagtggataagcatccaatgtcttctaaatcctctgaaatagttgttgctccaagc 871  T
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctc 265  Q
    |||||||| || |||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||| || ||    
T  870 ttccattccttatgcaatgatatgcatacagaataacaacatttaactaacttcagcttccagtcttcagactcttatgaactccaacttctgatggttc 771  T
Q  266 ttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagct 365  Q
    |||| |||||||||||||||              ||| ||||||| || ||| || ||||||||| |||||||||||||||||||||||||| | |||||    
T  770 ttcaaactctctgatgacgt--------------cagcttctgatggtcttccgacgctctttgtcttcagactctgtcttgaatcttgcaacataagct 685  T
Q  366 tcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagacatacaaccttttat 441  Q
    |||||||| ||||||  |||| |||| |||||||||||||||| || ||||||| ||| |||||||||| ||||||    
T  684 tcctttttataaattacattgctctcttttgttcttccagaacatatacttgaattaacgacatacaactttttat 609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 1024 - 972
Alignment:
Q  21 gtagtcacagctgttatcttgtactactgcagacatgaggagtggagtagtgg 73  Q
    ||||||||| || ||||| |||||||||| ||||||||  |||||||||||||    
T  1024 gtagtcacaactattatcctgtactactgtagacatgataagtggagtagtgg 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 155; Significance: 4e-82; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 102 - 408
Target Start/End: Original strand, 7379 - 7685
Alignment:
Q  102 tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataata 201  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||| || || |||||||||||| ||||||||||||||| ||||| ||||    
T  7379 tgcgctcttcaatggataagcatccaatgctttctaattcttctgaaatagtcgctgttctaggcttccattccttctgcaatcatatgaattcaaaata 7478  T
Q  202 acaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctgaggctcttcagactctctgatgacgtcaatttctggtagaca 301  Q
    ||||| |||||||||||  ||||||||||||| |||||||  ||||||  ||||||||||||||||||||||||||||||||  ||  |||| |||| ||    
T  7479 acaacttttaactaactctagcttccagtctttagactctgttgaacttcagcttctgaggctcttcagactctctgatgacaccagcttctagtagcca 7578  T
Q  302 gtttctgatagttttcagatgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttctt 401  Q
    | || |||| || |||||| ||||||| | |||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  7579 gcttttgatggtgttcagacgctctttttcttcagactttgtcttcaatattgcaacacaagcttcctttttgtaaattctattgccctcatttgttctt 7678  T
Q  402 ccagaac 408  Q
     ||||||    
T  7679 tcagaac 7685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 154; Significance: 2e-81; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 31 - 430
Target Start/End: Complemental strand, 10540 - 10145
Alignment:
Q  31 ctgttatcttgtactactgcagacatgaggagtggagtagtgg---------ttgttcaattatactatgtcctttttgttgcgctcttcagtggataag 121  Q
    |||||||||||||||||||||||||||||||||||||||||||         |||| ||||| |||||| |||||||  | ||||| ||||||||||||     
T  10540 ctgttatcttgtactactgcagacatgaggagtggagtagtggaggtagtggttgtacaattgtactatatccttttcct-gcgcttttcagtggataaa 10442  T
Q  122 tatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttca 221  Q
     |||||||||||||||||| ||||||||||||||||||||  ||||| ||||| ||| ||||| ||||||||| | ||||||||||||||||||||||||    
T  10441 catccaatgccttctaatttctctgaaatagtcgttgctctcggcttgcattccttccgcaatgatatgcattaagaataacaacatttaactaacttca 10342  T
Q  222 gcttccagtcttcagactctcatgaactctagcttctga-ggctcttcagactctctgatgacgtcaatttctggtagacagtttctgatagttttcaga 320  Q
    |||||||||||| ||||||| |||||||| ||||||| | || ||||||||||||| ||||||||||  ||||||||||||| ||||||| || ||||||    
T  10341 gcttccagtctttagactctgatgaactccagcttctaatggttcttcagactctccgatgacgtcagcttctggtagacagcttctgatggtcttcaga 10242  T
Q  321 tgctctttgttttcagactctgtcttgaatcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaac 420  Q
     ||| ||| | ||||| ||||||||||             ||||||||||||||||| ||| |||| |||  |||||||||||| |||||| |||||||     
T  10241 cgctttttatcttcagtctctgtcttg-------------aagcttcctttttgtaatttccattgctcttttttgttcttccaaaacctatacttgaat 10155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 6309 - 6365
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaactt 416  Q
    ||||||||||| ||||  |||| |||| ||||||||||||||| |||||||| ||||    
T  6309 caagcttccttcttgttgattccattgctctcatttgttcttctagaacctatactt 6365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 31 - 264
Target Start/End: Original strand, 20045 - 20285
Alignment:
Q  31 ctgttatcttgtactactgcagacatgaggagtggagtagtgg--------ttgttcaattatactatgtcctttttgttgcgctcttcagtggataagt 122  Q
    ||||||||||||||||||||| || ||||||||||||||||||        |||| ||||| ||||||||||||||  | |||||||||| ||||||||     
T  20045 ctgttatcttgtactactgcaaacttgaggagtggagtagtggagaagtggttgtacaattgtactatgtccttttcct-gcgctcttcaatggataagc 20143  T
Q  123 atccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcag 222  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||  |||| ||||||||| ||||||||||| |||    
T  20144 atccaatgctttctaattcttctgaaatagtcgttgctctaggcttccattccttctgcaatcatatgagttcaaaataacaacttttaactaactccag 20243  T
Q  223 cttccagtcttcagactctcatgaactctagcttctgaggct 264  Q
    |||||||||||||||||||  ||||||  |||||||||||||    
T  20244 cttccagtcttcagactctattgaacttcagcttctgaggct 20285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 67 - 236
Target Start/End: Original strand, 59579 - 59746
Alignment:
Q  67 gtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggc 166  Q
    ||||||||||| || |||||||||||||||||| |  ||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  59579 gtagtggttgtacacttatactatgtcctttttcta-cgctcttcattggataaccatccaatgccttctaattcctctaaaatagtcgttgctccaggc 59677  T
Q  167 ttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcag 236  Q
    |||||||| |||| |||||||||||||| | ||||||| |||||||||||||||| |||| |||||||||    
T  59678 ttccattccttctacaatcatatgcatt-agaataacatcatttaactaacttcatcttctagtcttcag 59746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 406
Target Start/End: Original strand, 59831 - 59888
Alignment:
Q  349 atcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccaga 406  Q
    ||||||||| ||||||||||||||||||||||   ||| ||| ||||||| |||||||    
T  59831 atcttgcaacacaagcttcctttttgtaaattacgttgctcttatttgttattccaga 59888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 70 - 287
Target Start/End: Original strand, 2991 - 3208
Alignment:
Q  70 gtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttc 169  Q
    |||||||| |||||  |||||||||||||  ||| |||||| |||||||||| ||||||||| ||||||||||||| ||| |||||||||| || |||||    
T  2991 gtggttgtacaattgcactatgtccttttc-ttgagctctttagtggataagcatccaatgcattctaattcctctaaaacagtcgttgcttcaagcttc 3089  T
Q  170 cattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaactctagcttctga-ggctcttc 268  Q
    ||| | |||| |||| ||  |  |||| ||||||||| || |||| | ||||||||||| |||||||||||| ||||||||||||| |||| || |||||    
T  3090 cataccttctacaatgatcagacttcagaataacaactttgaactgatttcagcttccaatcttcagactctgatgaactctagctcctgatggttcttc 3189  T
Q  269 agactctctgatgacgtca 287  Q
    |||||||||| ||||||||    
T  3190 agactctctgctgacgtca 3208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 31638 - 31803
Alignment:
Q  60 gagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    |||||||||||||||||| ||||| |||||| |||||||  | ||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||    
T  31638 gagtggagtagtggttgtacaattgtactatatccttttcat-gcgctcttcagtggataagcatccaattccttctaattcctttaaaatagtcgttgc 31736  T
Q  160 tccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttc 226  Q
    |||||||||| |||| ||||||||| || ||  || | ||||||||  ||||||||||||| |||||    
T  31737 tccaggcttctattccttctgcaatgatgtgtcttgacaataacaaactttaactaacttcggcttc 31803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 61 - 249
Target Start/End: Original strand, 4284 - 4471
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    ||||||||||||||||| ||||| ||||||   | ||||  |||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  4284 agtggagtagtggttgtacaattgtactattgtcattttcctgcgttcttcagtggataagcatcaaatgccttctaattcctctgaaatagtcgttgct 4383  T
Q  161 ccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatgaact 249  Q
    ||||||||  |||| ||||| |||| | ||  |||| |||||| |  ||||||||||| |||||||  | ||||||||||| |||||||    
T  4384 ccaggcttttattccttctgaaatcttgtgttttca-aataaccaactttaactaactccagcttcttgacttcagactctgatgaact 4471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 249
Target Start/End: Complemental strand, 4136 - 3930
Alignment:
Q  41 gtactactgcagacatgaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaatt 140  Q
    |||||| |||||||||| | ||||||||||||||||| ||||| ||||||||||||||| | ||||||||||  ||||||  ||| ||| ||||||||||    
T  4136 gtactattgcagacatg-gtagtggagtagtggttgtacaattgtactatgtcctttttct-gcgctcttcaaaggataaacatcaaattccttctaatt 4039  T
Q  141 cctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactc 240  Q
    ||| |||||||| |||| |||||  |||| |||| |||||||||| | ||  ||||||||||| |  ||||||||||| || ||||  | |||| |||||    
T  4038 cctatgaaatagccgttcctccaaacttctattccttctgcaatcttgtgtcttcataataactaactttaactaactgcaacttcttgacttccgactc 3939  T
Q  241 tcatgaact 249  Q
    | |||||||    
T  3938 tgatgaact 3930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 1296 - 1244
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||| ||||  ||| | ||| |||||||||||||||||||||||||    
T  1296 caagcttccttcttgttgattatgttgctctcatttgttcttccagaacctaa 1244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 57 - 246
Target Start/End: Original strand, 112218 - 112403
Alignment:
Q  57 gaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgt 156  Q
    |||||||||||||||||||||  |||| ||||||||||||||  | |||||||||||||||   | |||||||||||||||||||||| ||||||  |||    
T  112218 gaggagtggagtagtggttgtaaaattgtactatgtccttttcct-gcgctcttcagtgga---gcatccaatgccttctaattcctcagaaatatccgt 112313  T
Q  157 tgctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtcttcagactctcatga 246  Q
    ||||  ||||||  |||| |||||||||| | ||  ||||||||||| |  ||||||||||| || ||||  | ||||||||||||||||    
T  112314 tgctttaggcttttattccttctgcaatcttgtgtcttcataataactaactttaactaactgcaacttcttgacttcagactctcatga 112403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 228
Target Start/End: Complemental strand, 3498 - 3332
Alignment:
Q  61 agtggagtagtggttgttcaattatactatgtcctttt--tgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttg 158  Q
    ||||||||||||||||| ||||| |||||||| |||||  |||| |   ||| |||||||||| ||| |||||||||||||||||||||||||| | |||    
T  3498 agtggagtagtggttgtacaattgtactatgttcttttcctgttcc---ctttagtggataagcatcgaatgccttctaattcctctgaaatagccattg 3402  T
Q  159 ctccaggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttcca 228  Q
    ||| ||||||| |||| |||| | || ||   ||  || ||| | |||||||||||||||||||||||||    
T  3401 ctctaggcttctattccttcttctatgatgcacaaacagaatgataacatttaactaacttcagcttcca 3332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 2730 - 2797
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaat 184  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  2730 ataagtatccaatgccttccaattcctctaaaatagtcgttgctccaggcttttattctttctgcaat 2797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 57 - 185
Target Start/End: Complemental strand, 9352 - 9228
Alignment:
Q  57 gaggagtggagtagtggttgttcaattatactatgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgt 156  Q
    |||||||||||||||||||||  |||| ||||||||||||||  | |||||||||||||||   | |||||||||||||||||||||| ||||||  |||    
T  9352 gaggagtggagtagtggttgtaaaattgtactatgtccttttcct-gcgctcttcagtgga---gcatccaatgccttctaattcctcagaaatatccgt 9257  T
Q  157 tgctccaggcttccattctttctgcaatc 185  Q
    ||||  ||||||  |||| ||||||||||    
T  9256 tgctttaggcttttattccttctgcaatc 9228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 87020 - 87091
Alignment:
Q  162 caggcttccattctttctgcaatcatatgcattcataataacaacatttaactaacttcagcttccagtctt 233  Q
    ||||||||||||| ||||||||||||||| ||||| ||||| ||| ||||||||||| ||||||||||||||    
T  87020 caggcttccattccttctgcaatcatatgaattcagaataaaaacttttaactaactccagcttccagtctt 87091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 431 - 497
Alignment:
Q  102 tgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggctt 168  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  431 tgcgctctttagtgaataagtattcaatgccttctaattcctctgaaattgtcgttgctctaggctt 497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 8098 - 8198
Alignment:
Q  61 agtggagtagtggttgttcaattatactatg-tcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgc 159  Q
    ||||||||||||||||| ||||||||||||  |||||| | |  |  ||| ||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  8098 agtggagtagtggttgtacaattatactattatcctttctatgaccttctccagtggataatcatccaatgccttctaattcctctgaaataatcgttgc 8197  T
Q  160 t 160  Q
    |    
T  8198 t 8198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 1936 - 1841
Alignment:
Q  59 ggagtggagtagtggttgttcaattatacta-tgtcctttttgttgcgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtc 154  Q
    ||||||||||||||||| | ||| | ||||| |||||||||  | |||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  1936 ggagtggagtagtggttatacaaatgtactagtgtccttttcat-gcgctctttagtggataagtatctaatgccttctatttcctctgaaatagtc 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 3355 - 3280
Alignment:
Q  108 cttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||| |||  |||| ||||||||    
T  3355 cttctgtggataagcatccaatgccttcaaattcctctgaaatagtcattgctccagacttttattccttctgcaa 3280  T

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Target: scaffold0388 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 5439 - 5514
Alignment:
Q  108 cttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaa 183  Q
    ||||| ||||||| |||||||||||||| |||||||||||| ||| |||||||||||||||| ||||  |||||||    
T  5439 cttcactggataaatatccaatgccttcaaattcctctgaattagccgttgctccaggcttctattccatctgcaa 5514  T

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Target: scaffold0388; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 4720 - 4797
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagac 427  Q
    |||||||| | | ||||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||| |||||||    
T  4720 tcttgcaacatatgcttcctttttgtattttccattgctctcatttgttcttccagaacctatacttgaattaaagac 4797  T

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Target: scaffold1107 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1107
Description:

Target: scaffold1107; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 2410 - 2357
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgct 160  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  2410 tcttcagtgggtaagcatccaatgccttctaattcctctaaaatagtcgttgct 2357  T

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Target: scaffold0035 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 29867 - 29958
Alignment:
Q  117 ataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttctgcaatcatatgcattcataataacaacattt 210  Q
    ||||| ||||||||||||| ||||| |||||| |||||||||||||||||||| |||| ||||||||| ||| ||  | |||||||||||||||    
T  29867 ataagcatccaatgccttccaattcatctgaattagtcgttgctccaggcttctattc-ttctgcaatgataggc-gtgataataacaacattt 29958  T

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Target: scaffold0067 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 16470 - 16403
Alignment:
Q  107 tcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattc 174  Q
    |||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||| |||| ||||    
T  16470 tcttcagtgggtaagcatccaatgccttctaatttctctaaaatagtcgttgcttcagtcttctattc 16403  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 206
Target Start/End: Original strand, 760 - 862
Alignment:
Q  104 cgctcttcagtggataagtatccaatgccttctaattcctctgaaatagtcgttgctccaggcttc-cattctttctgcaatcatatgcattcataataa 202  Q
    |||||||||  | ||||| ||||||||||||  |||| ||||||||||||||||||||||||||||  |||| ||||||||| ||| ||| | |||||||    
T  760 cgctcttcaaagaataagcatccaatgcctttcaatttctctgaaatagtcgttgctccaggcttcttattccttctgcaatgataggca-tgataataa 858  T
Q  203 caac 206  Q
    ||||    
T  859 caac 862  T

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Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 416083 - 416028
Alignment:
Q  124 tccaatgccttctaattcctctgaaatagtcgttgctccaggcttccattctttct 179  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| |||| ||||    
T  416083 tccaatgccttctaattcatttgaaatagtcgttgctccaggcttctattccttct 416028  T

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Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 428
Target Start/End: Original strand, 1030 - 1107
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagaca 428  Q
    ||||||| |||||| ||||||||||| |||  |||| ||| ||||||||||||||||||||  |||||  ||||||||    
T  1030 cttgcaacacaagcatcctttttgtagattacattgctcttatttgttcttccagaacctatgcttgatttaaagaca 1107  T

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Target: scaffold0003; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 1524 - 1566
Alignment:
Q  137 aattcctctgaaatagtcgttgctccaggcttccattctttct 179  Q
    |||||||||||||||||||||||||| |||||| |||| ||||    
T  1524 aattcctctgaaatagtcgttgctcctggcttctattccttct 1566  T

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Target: scaffold0916 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 2446 - 2369
Alignment:
Q  351 cttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaacttgaactaaagaca 428  Q
    |||||||  ||||||| ||||||||| |||  |||| ||||||||||||||||||||||||  |||||| ||||||||    
T  2446 cttgcaactcaagcttactttttgtagatttcattgctctcatttgttcttccagaacctatgcttgaattaaagaca 2369  T

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Target: scaffold0201 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 411
Target Start/End: Original strand, 19349 - 19410
Alignment:
Q  350 tcttgcaatacaagcttcctttttgtaaattctattgatctcatttgttcttccagaaccta 411  Q
    |||||||| |||||||||||||||||| |||| |||  ||||||||||||||||| ||||||    
T  19349 tcttgcaacacaagcttcctttttgtagattcaatttctctcatttgttcttccataaccta 19410  T

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Target: scaffold0081 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 412
Target Start/End: Original strand, 40968 - 41016
Alignment:
Q  364 cttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  40968 cttcctttttgttgattccattgctctcatttgttcttccagaacctaa 41016  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 402
Target Start/End: Original strand, 269042 - 269085
Alignment:
Q  359 acaagcttcctttttgtaaattctattgatctcatttgttcttc 402  Q
    ||||||||||||||| || ||||||||| |||||||||||||||    
T  269042 acaagcttcctttttctagattctattgctctcatttgttcttc 269085  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 35956 - 35923
Alignment:
Q  378 attctattgatctcatttgttcttccagaaccta 411  Q
    ||||||||| ||||||||||||||||||||||||    
T  35956 attctattgctctcatttgttcttccagaaccta 35923  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 9928 - 9880
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaac 408  Q
    ||||||||||||||||  |||| |||| |||| ||||||||||||||||    
T  9928 caagcttcctttttgttgattccattgctctcttttgttcttccagaac 9880  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000006; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 39731 - 39783
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  ||||  ||| |||| ||||||||||||||||||||    
T  39731 caagcttcctttttgttgattcctttgctctcttttgttcttccagaacctaa 39783  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Original strand, 137791 - 137843
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaa 412  Q
    ||||||||||||||||  ||||  ||| |||| ||||||||||||||||||||    
T  137791 caagcttcctttttgttgattcctttgctctcttttgttcttccagaacctaa 137843  T

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Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 159387 - 159443
Alignment:
Q  360 caagcttcctttttgtaaattctattgatctcatttgttcttccagaacctaaactt 416  Q
    |||||||| || ||||  |||| |||| |||||||||||||||||||||||| ||||    
T  159387 caagcttctttcttgttgattccattgctctcatttgttcttccagaacctatactt 159443  T

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