View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18674_high_23 (Length: 448)

Name: NF18674_high_23
Description: NF18674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18674_high_23
NF18674_high_23
[»] chr4 (42 HSPs)
chr4 (19-448)||(1506212-1506660)
chr4 (103-448)||(5577931-5578274)
chr4 (19-448)||(13713341-13713794)
chr4 (19-323)||(4852825-4853118)
chr4 (19-313)||(14190734-14191036)
chr4 (363-448)||(1506145-1506230)
chr4 (353-448)||(14190520-14190614)
chr4 (367-448)||(1506012-1506093)
chr4 (363-448)||(5599884-5599968)
chr4 (367-448)||(13713141-13713222)
chr4 (31-162)||(2894141-2894272)
chr4 (363-448)||(1506079-1506163)
chr4 (363-448)||(5599818-5599902)
chr4 (363-448)||(13713275-13713359)
chr4 (363-448)||(31663380-31663465)
chr4 (353-448)||(5599950-5600044)
chr4 (363-448)||(31663312-31663398)
chr4 (367-448)||(5909095-5909175)
chr4 (359-448)||(5578252-5578340)
chr4 (363-448)||(31663514-31663599)
chr4 (19-100)||(5577088-5577169)
chr4 (363-444)||(31663447-31663528)
chr4 (198-306)||(5600176-5600284)
chr4 (363-418)||(5909058-5909113)
chr4 (363-418)||(14190483-14190538)
chr4 (353-418)||(4852566-4852631)
chr4 (367-448)||(13713208-13713289)
chr4 (358-418)||(4852635-4852695)
chr4 (363-418)||(1505975-1506030)
chr4 (363-417)||(5599782-5599836)
chr4 (359-418)||(5578318-5578377)
chr4 (363-418)||(5578452-5578507)
chr4 (363-418)||(13702611-13702666)
chr4 (363-418)||(13713104-13713159)
chr4 (364-448)||(31663244-31663330)
chr4 (367-418)||(31663585-31663636)
chr4 (353-448)||(6735309-6735402)
chr4 (358-423)||(6735379-6735444)
chr4 (353-406)||(4852717-4852770)
chr4 (273-338)||(31663134-31663200)
chr4 (271-338)||(6735218-6735286)
chr4 (308-338)||(14190632-14190662)
[»] chr7 (41 HSPs)
chr7 (19-334)||(4341509-4341824)
chr7 (31-306)||(42785494-42785768)
chr7 (176-306)||(21958251-21958381)
chr7 (353-448)||(4341382-4341476)
chr7 (363-448)||(4341315-4341400)
chr7 (31-174)||(19803497-19803640)
chr7 (363-448)||(4341249-4341333)
chr7 (363-448)||(48477915-48477999)
chr7 (365-448)||(34456401-34456484)
chr7 (353-448)||(42785897-42785991)
chr7 (363-448)||(48477981-48478065)
chr7 (363-448)||(48478047-48478131)
chr7 (363-448)||(48478243-48478327)
chr7 (19-139)||(21958072-21958192)
chr7 (364-448)||(21958491-21958575)
chr7 (363-446)||(48478179-48478261)
chr7 (353-448)||(48478309-48478403)
chr7 (367-448)||(3078512-3078593)
chr7 (198-306)||(48478535-48478643)
chr7 (363-418)||(4341212-4341267)
chr7 (374-445)||(15695391-15695462)
chr7 (374-445)||(15702371-15702442)
chr7 (363-448)||(48478113-48478195)
chr7 (363-448)||(21958423-21958508)
chr7 (364-417)||(34456334-34456387)
chr7 (363-428)||(34456466-34456531)
chr7 (358-417)||(3078570-3078629)
chr7 (363-418)||(42785973-42786028)
chr7 (368-448)||(3081365-3081445)
chr7 (363-418)||(21958557-21958612)
chr7 (358-418)||(3081329-3081388)
chr7 (363-423)||(15695447-15695507)
chr7 (363-423)||(15702427-15702487)
chr7 (364-423)||(33615957-33616016)
chr7 (367-416)||(3078728-3078777)
chr7 (355-416)||(3081124-3081185)
chr7 (355-406)||(3078647-3078698)
chr7 (367-418)||(3081191-3081242)
chr7 (272-338)||(34456240-34456307)
chr7 (355-418)||(3081260-3081323)
chr7 (387-441)||(21958380-21958434)
[»] chr6 (35 HSPs)
chr6 (19-448)||(26725872-26726314)
chr6 (19-448)||(26619959-26620401)
chr6 (157-448)||(28145249-28145541)
chr6 (85-276)||(5130574-5130766)
chr6 (19-286)||(5249545-5249811)
chr6 (31-306)||(29934141-29934415)
chr6 (31-306)||(34255047-34255321)
chr6 (20-204)||(28223000-28223184)
chr6 (19-286)||(8520057-8520323)
chr6 (19-319)||(33295713-33296014)
chr6 (353-448)||(34255452-34255546)
chr6 (43-128)||(28145540-28145625)
chr6 (363-445)||(28145118-28145200)
chr6 (353-448)||(29934543-29934637)
chr6 (366-448)||(26620386-26620468)
chr6 (366-448)||(26726365-26726447)
chr6 (358-448)||(28145182-28145272)
chr6 (363-448)||(26726296-26726380)
chr6 (367-448)||(34255598-34255678)
chr6 (363-448)||(34255528-34255612)
chr6 (353-441)||(6406571-6406658)
chr6 (353-448)||(5249934-5250029)
chr6 (363-418)||(29934619-29934674)
chr6 (368-448)||(5250016-5250098)
chr6 (272-448)||(31113057-31113240)
chr6 (363-418)||(26620450-26620505)
chr6 (363-418)||(26726429-26726484)
chr6 (363-418)||(28145078-28145133)
chr6 (363-417)||(34255660-34255714)
chr6 (354-417)||(5250071-5250134)
chr6 (373-448)||(6406495-6406570)
chr6 (189-236)||(28222810-28222857)
chr6 (367-407)||(33296087-33296127)
chr6 (368-418)||(31113227-31113277)
chr6 (19-52)||(28146253-28146286)
[»] chr1 (20 HSPs)
chr1 (19-448)||(51844451-51844893)
chr1 (19-323)||(14114329-14114622)
chr1 (359-448)||(51844384-51844473)
chr1 (272-448)||(15088603-15088787)
chr1 (272-448)||(22211211-22211395)
chr1 (355-448)||(22207797-22207890)
chr1 (367-448)||(22207933-22208014)
chr1 (355-448)||(22207661-22207754)
chr1 (367-448)||(22208067-22208148)
chr1 (353-448)||(14114680-14114777)
chr1 (353-418)||(14114749-14114814)
chr1 (359-428)||(51844337-51844406)
chr1 (366-418)||(22208030-22208082)
chr1 (363-418)||(22207896-22207951)
chr1 (358-417)||(15088567-15088626)
chr1 (363-418)||(22207760-22207815)
chr1 (358-417)||(22211175-22211234)
chr1 (353-418)||(14114818-14114883)
chr1 (364-417)||(22207625-22207678)
chr1 (367-418)||(14114903-14114954)
[»] chr8 (26 HSPs)
chr8 (49-297)||(20809986-20810234)
chr8 (31-306)||(5558212-5558484)
chr8 (308-448)||(20810286-20810423)
chr8 (363-448)||(5557790-5557874)
chr8 (363-448)||(5557724-5557808)
chr8 (363-448)||(25336636-25336721)
chr8 (367-448)||(5557856-5557936)
chr8 (367-448)||(25336569-25336650)
chr8 (353-448)||(5557989-5558083)
chr8 (363-448)||(5557922-5558007)
chr8 (368-448)||(3166007-3166087)
chr8 (367-448)||(3165806-3165887)
chr8 (368-417)||(25336472-25336521)
chr8 (367-418)||(20810409-20810460)
chr8 (363-417)||(5557688-5557742)
chr8 (358-443)||(3165864-3165949)
chr8 (369-418)||(3166075-3166124)
chr8 (363-423)||(26082094-26082154)
chr8 (365-412)||(26082037-26082084)
chr8 (358-448)||(3165931-3166020)
chr8 (363-448)||(25336508-25336587)
chr8 (366-444)||(4844047-4844124)
chr8 (372-406)||(21542084-21542118)
chr8 (366-417)||(21542145-21542197)
chr8 (275-332)||(25336771-25336829)
chr8 (365-418)||(4844112-4844165)
[»] chr2 (16 HSPs)
chr2 (34-306)||(2742916-2743187)
chr2 (353-448)||(2743310-2743404)
chr2 (363-448)||(2743386-2743470)
chr2 (363-448)||(2743452-2743536)
chr2 (367-448)||(31315018-31315099)
chr2 (363-448)||(31346953-31347038)
chr2 (363-448)||(31347020-31347105)
chr2 (363-428)||(31314971-31315036)
chr2 (272-448)||(31346754-31346918)
chr2 (364-448)||(31315155-31315240)
chr2 (363-418)||(2743518-2743573)
chr2 (363-412)||(31347087-31347136)
chr2 (365-423)||(11951280-11951338)
chr2 (367-417)||(31315119-31315169)
chr2 (364-398)||(31346901-31346935)
chr2 (411-448)||(31346934-31346971)
[»] scaffold0158 (1 HSPs)
scaffold0158 (31-306)||(26300-26574)
[»] scaffold0038 (2 HSPs)
scaffold0038 (20-204)||(23498-23682)
scaffold0038 (189-236)||(23308-23355)
[»] chr5 (8 HSPs)
chr5 (31-306)||(41528832-41529106)
chr5 (19-319)||(37368454-37368751)
chr5 (353-448)||(41528609-41528703)
chr5 (363-448)||(41528477-41528561)
chr5 (363-448)||(41528543-41528627)
chr5 (363-417)||(41528441-41528495)
chr5 (364-445)||(37368922-37369004)
chr5 (364-422)||(37368990-37369048)
[»] scaffold0046 (4 HSPs)
scaffold0046 (97-286)||(90843-91031)
scaffold0046 (353-448)||(90514-90609)
scaffold0046 (367-418)||(90477-90528)
scaffold0046 (367-418)||(90613-90663)
[»] chr3 (37 HSPs)
chr3 (364-448)||(5938891-5938975)
chr3 (363-448)||(5938824-5938909)
chr3 (363-448)||(18111544-18111629)
chr3 (31-174)||(14530182-14530325)
chr3 (368-448)||(14521046-14521125)
chr3 (363-448)||(5938958-5939043)
chr3 (363-448)||(18111477-18111562)
chr3 (363-448)||(19384174-19384258)
chr3 (363-448)||(5938757-5938842)
chr3 (375-448)||(19384302-19384375)
chr3 (367-448)||(19441089-19441170)
chr3 (363-448)||(28034763-28034847)
chr3 (364-444)||(2746785-2746865)
chr3 (363-443)||(19384064-19384144)
chr3 (365-428)||(18111430-18111493)
chr3 (363-418)||(5835618-5835673)
chr3 (363-418)||(14521107-14521162)
chr3 (367-421)||(28034656-28034710)
chr3 (367-448)||(28034696-28034777)
chr3 (366-418)||(29897056-29897108)
chr3 (364-423)||(19479989-19480048)
chr3 (367-418)||(29897111-29897162)
chr3 (366-448)||(28034829-28034906)
chr3 (363-448)||(19384240-19384320)
chr3 (368-448)||(45227234-45227314)
chr3 (367-418)||(5938720-5938771)
chr3 (363-418)||(19441052-19441107)
chr3 (358-417)||(45227291-45227351)
chr3 (272-332)||(2746672-2746733)
chr3 (363-407)||(19384148-19384192)
chr3 (358-418)||(29897166-29897226)
chr3 (272-342)||(5939081-5939152)
chr3 (367-417)||(19480059-19480110)
chr3 (272-339)||(5835714-5835782)
chr3 (366-417)||(19480125-19480177)
chr3 (272-338)||(18111677-18111744)
chr3 (273-334)||(19441229-19441291)
[»] scaffold0043 (3 HSPs)
scaffold0043 (367-448)||(69771-69852)
scaffold0043 (273-448)||(69608-69785)
scaffold0043 (363-418)||(69834-69889)
[»] scaffold0927 (3 HSPs)
scaffold0927 (367-448)||(3596-3677)
scaffold0927 (374-448)||(3663-3737)
scaffold0927 (363-417)||(3560-3614)
[»] scaffold0060 (2 HSPs)
scaffold0060 (353-448)||(39922-40016)
scaffold0060 (366-418)||(40001-40053)


Alignment Details
Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 19 - 448
Target Start/End: Complemental strand, 1506660 - 1506212
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||     
T  1506660 ctttggggatcaattataattatgttagattattgagataacatgaataattagaccatttttatgattacttgccgattgtgcaagcatgactatcata 1506561  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttat 218  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  1506560 ccatatgaatggtacatttgaaacagaatagatatgagatggtagaatgattatttctgaattaggtatccttatttgtttattctaaaatctcatttat 1506461  T
Q  219 gttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaagaaaattga--- 315  Q
     ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       
T  1506460 attaataaatatgtttatgctagtataaatgttggaggggaattctatcaacgcaattgatgtatataattatagtaatgatttgaaagaaaattgaaat 1506361  T
Q  316 -----------------aatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatctccgtttgctacaacgaagagataatgtagcctat 398  Q
                     ||||||||||||||||||||||||||||         ||||||||| ||  |||||| |||||||||||||||||||||||||    
T  1506360 gtggaaaaaaaaattgaaatgagtaacatgctcatagaaagaaagaaaaaaaaattgagaaaaactatgtttgcaacaacgaagagataatgtagcctat 1506261  T
Q  399 gaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1506260 gaggtacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 1506212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 103 - 448
Target Start/End: Original strand, 5577931 - 5578274
Alignment:
Q  103 aagcatgactatcatgccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttt-tgaattaggtattcttatttgtttat 201  Q
    ||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  5577931 aagcatgactatcatgccatatgaatggtacatgtgaaacaaaataaatatgagatagtagaataattattttttgaattaggaatctttatttgtttat 5578030  T
Q  202 tctaaaatctcatttatgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     ||||||| |||    
T  5578031 tctaaaatctcatttatgttaataagtatgtttatgctagtataaatgttggagggaagttctatcaacgcaattgatgtatat-----tagtaatgatt 5578125  T
Q  302 tgaaagaaaattgaaatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatctccgtttgctacaacgaagag--ataatgtagcctatg 399  Q
    |||||||||||||||||||||||||||||||||||||  ||          |||||||||||||||||| |||||||||||||  ||||||||| |||||    
T  5578126 tgaaagaaaattgaaatgagtaacatgctcatagaaaagaaaaaaaaaaacttgagaaaatctccgtttactacaacgaagagatataatgtagtctatg 5578225  T
Q  400 aggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  5578226 aggtatggctcatagtaacgaatgcgaaatctctgtttgctacaacgaa 5578274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 19 - 448
Target Start/End: Complemental strand, 13713794 - 13713341
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||| ||||| ||||||||||  ||||| |||||||||||||||||||||||||||     
T  13713794 ctttggggatcaattatgattatgttagattattgagataatatgaataattaaaccatttttatgattacctgccgattgtgcaagcatgactatcata 13713695  T
Q  119 ccata-----tgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctca 213  Q
    |||||     ||||||||||||||||| || |||| ||||||||||||| ||| ||||||| |||||||||||| ||||| |||||||||||||||||||    
T  13713694 ccataccatatgaatggtacatttgaaacaaaatagatatgagatagtaaaatgattatttctgaattaggtatccttatgtgtttattctaaaatctca 13713595  T
Q  214 tttatgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaagaaaatt 313  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||  |||| |||||||||    
T  13713594 tttatgttaataaatatgtttatgctagtataaatgttggaggggaattctatcaatgcaattgatgtatataatcatagtaatggtttgtaagaaaatt 13713495  T
Q  314 ga------------------aatgagtaacatgctcatagaaagaaag-nnnnnnnnnttgagaaaatctccgtttgctacaacgaagagataatgtagc 394  Q
    ||                  ||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||| |    
T  13713494 gaaatgtgtaaaaaaattgaaatgagtaacatgctcatagaaagaaagaaaaaaaaaattgagaaaaactccgtttgctacaacgaagagataatgtatc 13713395  T
Q  395 ctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||| | |||||| ||||||||  |||| |||||||||||||||||||    
T  13713394 ctatgaggtatgactcataataacgaattcgaaaactccgtttgctacaacgaa 13713341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 323
Target Start/End: Complemental strand, 4853118 - 4852825
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4853118 ctttggggatcaattatgattatgttagattattgagataacatgaataattagaccatttttatgattacttgccgattgtgcaagcatgactatcatg 4853019  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttat 218  Q
    ||| |||||||||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||     
T  4853018 cca-atgaatggtacatttgaaacagaattaatatgagatagtagaatgattatttctgaattaggtatccttatttgtttattctaaaatctcattta- 4852921  T
Q  219 gttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaagaaaattgaaat 318  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  4852920 ---------tatgtttatgctagtataaatgttggagggaaattctatcaacgcaattggtgtatataattatagtaatgatttgaaaggaaattgaaat 4852830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 19 - 313
Target Start/End: Complemental strand, 14191036 - 14190734
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||| |||| |||||||||||| ||  |||||||||||||||||| ||||||||||||||||  |||||| |||  |||||||||||||||||| |||    
T  14191036 ctttggagatcgattatgattatgctagattattgagataacatgaataattagaccatttttatgattactcgccttttgtgcaagcatgactattatg 14190937  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatag-tagaataattatttttgaattaggtattcttatttgtttattctaaaatctcattta 217  Q
    ||||||||||||||||||||||  ||||||||||| |||||| |||||| ||||||| |  |||||| |  |||| ||||||||||||||||| | ||||    
T  14190936 ccatatgaatggtacatttgaagtagaataaatataagatagttagaatgattatttcttgattaggcacccttacttgtttattctaaaatccctttta 14190837  T
Q  218 tgttaataagtat--gt---ttatgctagtataaatgttggagggaaattctatcaacgcaattga----tgtatataattatagtaataatttgaaaga 308  Q
    |||||||||||||  ||   ||||| | || ||||||||||||||||||  || ||||||||||||    | |||||| | |||| ||| ||||||||||    
T  14190836 tgttaataagtataagtatgttatgttcgtttaaatgttggagggaaat--taacaacgcaattgatatgtatatatactaatagaaatgatttgaaaga 14190739  T
Q  309 aaatt 313  Q
    |||||    
T  14190738 aaatt 14190734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 1506230 - 1506145
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  1506230 ctccgtttgctacaacgaagagataatgtagcctatgaggtatggctcatagtaacgaatgtgaaaactccgtttgctacaacgaa 1506145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 353 - 448
Target Start/End: Complemental strand, 14190614 - 14190520
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  14190614 ttgagaaaatctctgtttgctacaacgaagagataatgtagcctacgaggtacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 14190520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 1506093 - 1506012
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  1506093 gtttgctacaacgaagagataatgtagcctatgaggtaaggctcatagtaacgaatgtgaaaactccgtttgctacaacgaa 1506012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5599968 - 5599884
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  5599968 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 5599884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 13713222 - 13713141
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  13713222 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaatgaatgtgaaaactccgtttgctacaacgaa 13713141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 2894141 - 2894272
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| ||||||||||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||||     
T  2894141 attatgattatgttagattaatgagataacatgaataattagaccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatga 2894240  T
Q  131 tacatttgaatcagaataaatatgagatagta 162  Q
    |||||||||| ||||||| |||||||||||||    
T  2894241 tacatttgaaacagaatagatatgagatagta 2894272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 1506163 - 1506079
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  1506163 ctccgtttgctacaacgaagagataatatagcctatgaggtacggctcatagtaacgaatgtgaaa-ctcagtttgctacaacgaa 1506079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5599902 - 5599818
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  5599902 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaatgaatgtgaaa-ctccgtttgctacaacgaa 5599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 13713359 - 13713275
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  13713359 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaa-ctctgtttgctacgacgaa 13713275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 31663380 - 31663465
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||    
T  31663380 ctccgtttgctacaacgaagagataatgtagcctatgagatacggctcatagtaaaaaatgtgaaaactccgtttgctacaacgaa 31663465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 353 - 448
Target Start/End: Complemental strand, 5600044 - 5599950
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||    
T  5600044 ttgataaaaactccgtttgctacaacgaagagataatgtagcctatgatgaacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 5599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 31663312 - 31663398
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagt-aacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||    
T  31663312 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaaaaaaatgtgaaaactccgtttgctacaacgaa 31663398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 5909175 - 5909095
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  5909175 gtttgctacaacgaagagataatgtagcctatgaggaacgactcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 5909095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 359 - 448
Target Start/End: Original strand, 5578252 - 5578340
Alignment:
Q  359 aaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||  ||||||||| ||||||||||||||    
T  5578252 aaatctctgtttgctacaacgaagagataatgtagcctatgaggtacgacttatagtaacgaat-agaaatctccttttgctacaacgaa 5578340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 31663514 - 31663599
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||||| ||| |||||||||||||||    
T  31663514 ctccgtttgctacaatgaagagataatgtagcctataaggtacggctcaaagtaacaaatgtgaaaactctgtttgctacaacgaa 31663599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 5577088 - 5577169
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgt 100  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||    
T  5577088 ctttggggatcaattatgattatgttagattattgacataacatgaataattagaccatttttaggattacatgccgattgt 5577169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 31663447 - 31663528
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaa 444  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||  ||||||||| |||||||||||||||    
T  31663447 ctccgtttgctacaacgaagagataatgtagcctatgaggtgtagctcatagtaaaaaatgtgaaaactccgtttgctacaa 31663528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 5600284 - 5600176
Alignment:
Q  198 ttattctaaaatctcatttatgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaat 297  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| |||| ||||||||  ||||| ||||||  |||||||| | ||||||||| |||||    
T  5600284 ttattctaaaatctcttttatgttaataagtatgtttatgttagcataattgttggagtaaaattttatcaagacaattgatatgtataattatggtaat 5600185  T
Q  298 aatttgaaa 306  Q
     ||||||||    
T  5600184 gatttgaaa 5600176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 5909113 - 5909058
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5909113 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 5909058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 14190538 - 14190483
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14190538 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 14190483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 353 - 418
Target Start/End: Complemental strand, 4852631 - 4852566
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4852631 ttgagaaaaactctgtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaac 4852566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 13713289 - 13713208
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||  ||| ||||| ||| |||||||||||||||    
T  13713289 gtttgctacgacgaagagataatgtagcctatgaggtacgactcatagtaataaatttgaaaactctgtttgctacaacgaa 13713208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 4852695 - 4852635
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4852695 aaaaactctgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 4852635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 1506030 - 1505975
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1506030 ctccgtttgctacaacgaagagataatgtagcctatgaagtacggctcatagtaac 1505975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 5599836 - 5599782
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5599836 ctccgtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaa 5599782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 5578318 - 5578377
Alignment:
Q  359 aaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  5578318 aaatctccttttgctacaacgaagagataatgtagccaatgaggtatggctcatagtaac 5578377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 5578452 - 5578507
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  5578452 ctccgtttgctacaacgaagagataatgtagcctacgaggtacgactcatagtaac 5578507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 13702666 - 13702611
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  13702666 ctccgtttgctacaacgaagagataatgtagcctatgaggtaggactcatagtaac 13702611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 13713159 - 13713104
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  13713159 ctccgtttgctacaacgaagagataatgtagcctatgaggtaggactcatagtaac 13713104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 448
Target Start/End: Original strand, 31663244 - 31663330
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagt--aacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||| ||| |||||||||||||||||||||||  ||||||||  ||  ||||||||| |||||||||||||||||||    
T  31663244 tccgtttgctacaatgaatagataatgtagcctatgaggtacaactcatagtaaaaaaaatgtgaaaactccgtttgctacaacgaa 31663330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 31663585 - 31663636
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31663585 gtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaac 31663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 6735309 - 6735402
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgt-gaaatctccgtttgctacaacgaa 448  Q
    ||||||||| ||| |||||||||   |||||||||||||||| ||||||||||| ||||||||||| |||||  ||||||| |||||||||||||||    
T  6735309 ttgagaaaaactctgtttgctac---gaagagataatgtagcttatgaggtacgactcatagtaacaaatgtaaaaatctctgtttgctacaacgaa 6735402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 423
Target Start/End: Original strand, 6735379 - 6735444
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatg 423  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||||    
T  6735379 aaaatctctgtttgctacaacgaagagataatgtagcttatgagatacgactcatagtaacaaatg 6735444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 4852770 - 4852717
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacg 406  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  4852770 ttgagaaaatctttgtttgctacaccgaagagataatgtagcctatgaggtacg 4852717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 338
Target Start/End: Original strand, 31663134 - 31663200
Alignment:
Q  273 aattgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctcatagaaa 338  Q
    |||||||||||||| |||||  ||| ||||||||||||| ||||||||||||||||||||| |||||    
T  31663134 aattgatgtatatacttatataaattatttgaaagaaaaattgaaatgagtaacatgctcaaagaaa 31663200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 338
Target Start/End: Original strand, 6735218 - 6735286
Alignment:
Q  271 gcaattgatgtatataattatagtaataatttgaaag-aaaattgaaatgagtaacatgctcatagaaa 338  Q
    |||||||||||||||| |||||| ||  ||||||||| ||||||||||||||||||| ||||| |||||    
T  6735218 gcaattgatgtatatacttatagaaactatttgaaagaaaaattgaaatgagtaacaggctcaaagaaa 6735286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 338
Target Start/End: Complemental strand, 14190662 - 14190632
Alignment:
Q  308 aaaattgaaatgagtaacatgctcatagaaa 338  Q
    |||||||||||||||||||||||||||||||    
T  14190662 aaaattgaaatgagtaacatgctcatagaaa 14190632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 19 - 334
Target Start/End: Complemental strand, 4341824 - 4341509
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||||||||||||||||||||||||  |||||||||||| ||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4341824 ctttggggatcaattatgattatgttagattattgagataatatggataattagaccatttttatgattacttgccgattgtgcaagcatgactatcatg 4341725  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttat 218  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  4341724 ccatatgaatggtacatttgaaacagaataaatatgagatagtagaatgattatttctgaattaggtatccttatttgtttattctaaaatctcatttat 4341625  T
Q  219 gttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaagaaaattgaaat 318  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4341624 gttaataagtatgtttatgctagtataaatgttggaaggaaattctatcaacgcaattgatgtatataattatagtaatgatttgaaagaaaattgaaat 4341525  T
Q  319 gagtaacatgctcata 334  Q
    ||||||||||||||||    
T  4341524 gagtaacatgctcata 4341509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 31 - 306
Target Start/End: Original strand, 42785494 - 42785768
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| ||||||||||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||||     
T  42785494 attatgattatgttagattaatgagataacatgaataattagaccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatga 42785593  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtat 230  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| |||| ||||||   ||||| | ||||||||||||||| |||||||||||||||||    
T  42785594 tacatttgaaacagaatagatatgagatagtagaatgattatttctgaactaggtacaattattag-ttattctaaaatctcttttatgttaataagtat 42785692  T
Q  231 gtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaa 306  Q
    ||||||| ||| |||| ||||||||||||||| ||||||  |||||||| | ||||||||| ||||| ||||||||    
T  42785693 gtttatgttagcataattgttggagggaaattttatcaagacaattgatatgtataattatggtaatgatttgaaa 42785768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 176 - 306
Target Start/End: Original strand, 21958251 - 21958381
Alignment:
Q  176 tgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaat 275  Q
    |||||||||||   ||||| ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  21958251 tgaattaggtaccattattagtttattctaaaatctcttttatgttaataagtatgtatatgttagtataaatgttggagggaaattctatcaatgcaat 21958350  T
Q  276 tgatgtatataattatagtaataatttgaaa 306  Q
    |||||||||||||||||||||| ||||||||    
T  21958351 tgatgtatataattatagtaatgatttgaaa 21958381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 353 - 448
Target Start/End: Complemental strand, 4341476 - 4341382
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  4341476 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgcgaaa-ctccgtttgctacaacgaa 4341382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 4341400 - 4341315
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4341400 ctccgtttgctacaacgaagagataatgtagcttatgaggtacggctcatagtaacgaatgtgaaaactccgtttgctacaacgaa 4341315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 19803640 - 19803497
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| |||||| |||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||||     
T  19803640 attatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatga 19803541  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattattt 174  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||    
T  19803540 tacatttgaaacagaatagatatgagatagtagaatgattattt 19803497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 4341333 - 4341249
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  4341333 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 4341249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 48477999 - 48477915
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  48477999 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 48477915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 365 - 448
Target Start/End: Original strand, 34456401 - 34456484
Alignment:
Q  365 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  34456401 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaaaaaatgtgaaaactccgtttgctacaacgaa 34456484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 42785897 - 42785991
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  42785897 ttgataaaaactccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 42785991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 48478065 - 48477981
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  48478065 ctccgtttgctacaacgaagagataatgtagcctatgaggaacgggtcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 48477981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 48478131 - 48478047
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  48478131 ctccgtttgctacaacgaagagataatgtagcctatgaggaacgggtcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 48478047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 48478327 - 48478243
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  48478327 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgggaaa-ctccgtttgctacaacgaa 48478243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 21958072 - 21958192
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||| ||||||  ||| |||| |  |||||||||||||||||| |||    
T  21958072 ctttggggatcagttatgattatgttatattattgagataacatgaataattagaccttttttatgatttcttgtcttttgtgcaagcatgactattatg 21958171  T
Q  119 ccatatgaatggtacatttga 139  Q
    ||||||||| |||||||||||    
T  21958172 ccatatgaaaggtacatttga 21958192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 364 - 448
Target Start/End: Original strand, 21958491 - 21958575
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||||||||    
T  21958491 tccgtttgctacaacgaagagataatgtagcctatgaggtatggctcatagtaacaaatgcgaaaactccgtttgctacaacgaa 21958575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 48478261 - 48478179
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacg 446  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  48478261 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaatgaatgtgaaa-ctccgtttgctacaacg 48478179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 353 - 448
Target Start/End: Complemental strand, 48478403 - 48478309
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||    
T  48478403 ttgataaaaactccgtttgctacaacgaagagataatgtagcctatgatgaacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 48478309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 3078512 - 3078593
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||  ||| |||||||||||||||||||    
T  3078512 gtttgttacaacgaagagataatgtagtctatgaggtacgactcatagtaacgaatgcaaaaactccgtttgctacaacgaa 3078593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 48478643 - 48478535
Alignment:
Q  198 ttattctaaaatctcatttatgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaat 297  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| |||| ||||||||  ||||| ||||||  |||||||| | ||||||||| |||||    
T  48478643 ttattctaaaatctcttttatgttaataagtatgtttatgttagcataattgttggagtaaaattttatcaagacaattgatatgtataattatggtaat 48478544  T
Q  298 aatttgaaa 306  Q
     ||||||||    
T  48478543 gatttgaaa 48478535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 4341267 - 4341212
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4341267 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 4341212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 15695391 - 15695462
Alignment:
Q  374 acaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaac 445  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||    
T  15695391 acaacgaagagataatgtagcctatgaggtacagctcatagtaacaaatgcgaaaactccgtttgctacaac 15695462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 15702371 - 15702442
Alignment:
Q  374 acaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaac 445  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||    
T  15702371 acaacgaagagataatgtagcctatgaggtacagctcatagtaacaaatgcgaaaactccgtttgctacaac 15702442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 48478195 - 48478113
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  48478195 ctccgtttgctacaacg--gagataatgtagcctacgaggaacggctcatagtaacgaatctgaaa-ctccgtttgctacaacgaa 48478113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 21958423 - 21958508
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||| |||   ||||||||||||||||||    
T  21958423 ctccgtttgctaaaacaaagagataatgtaacctatgaggtacggctcatagtaacaaatgcgaagattccgtttgctacaacgaa 21958508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 34456334 - 34456387
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34456334 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 34456387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 363 - 428
Target Start/End: Original strand, 34456466 - 34456531
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaa 428  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  34456466 ctccgtttgctacaacgaagagataatgtagtctatgaagtacggctcatagtaacaaatgtgaaa 34456531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 3078570 - 3078629
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3078570 aaaaactccgtttgctacaacgaatagataatgtagcctatgaggtacggctcatagtaa 3078629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 42785973 - 42786028
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42785973 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctgatagtaac 42786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 368 - 448
Target Start/End: Complemental strand, 3081445 - 3081365
Alignment:
Q  368 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||| ||||| ||||||||||||||| |||||||||| ||||||||||| ||||  ||| |||||||||||||||||||    
T  3081445 tttgctgcaacggagagataatgtagccaatgaggtacgactcatagtaacaaatgcaaaaactccgtttgctacaacgaa 3081365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 21958557 - 21958612
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  21958557 ctccgtttgctacaacgaagagataatatagcctatgaggtacgactcatagtaac 21958612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 3081388 - 3081329
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  3081388 aaaaactccgtttgctacaacgaa-agataatgtagcctatgaggtacgactcatagtaac 3081329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 15695447 - 15695507
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatg 423  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||    
T  15695447 ctccgtttgctacaactaagagataatgtagcctatgaggtaaggcttatagtaacaaatg 15695507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 15702427 - 15702487
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatg 423  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||    
T  15702427 ctccgtttgctacaactaagagataatgtagcctatgaggtaaggcttatagtaacaaatg 15702487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 33615957 - 33616016
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatg 423  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  33615957 tccgtttgctacaacgaagagacaatgtagtctatgaggtacggctcatggtaacaaatg 33616016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 3078728 - 3078777
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagta 416  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  3078728 gtttgctacaacgaagagataacgtagcttatgaggtacggctcatagta 3078777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 416
Target Start/End: Complemental strand, 3081185 - 3081124
Alignment:
Q  355 gagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagta 416  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  3081185 gagaaaaactctatttgctacaacgaagagataacgtagcctatgaggtacgactcatagta 3081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 406
Target Start/End: Original strand, 3078647 - 3078698
Alignment:
Q  355 gagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacg 406  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  3078647 gagaaaaactctgtttgctacaacgatgagataatgtagcctatgaggtacg 3078698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 3081242 - 3081191
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  3081242 gtttgctacaacgatgagataatgcagcctatgaggtacgactcatagtaac 3081191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 338
Target Start/End: Original strand, 34456240 - 34456307
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaag-aaaattgaaatgagtaacatgctcatagaaa 338  Q
    |||||||||||||||||||||  ||| ||||||||| |||||||||||||||||| |||||| |||||    
T  34456240 caattgatgtatataattatataaattatttgaaagaaaaattgaaatgagtaacctgctcaaagaaa 34456307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 418
Target Start/End: Complemental strand, 3081323 - 3081260
Alignment:
Q  355 gagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||| ||| ||||||||||| || ||||||||| |||||||| |||||| |||||||||||    
T  3081323 gagaaaaactctgtttgctacaatgatgagataatgcagcctatggggtacgactcatagtaac 3081260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 21958380 - 21958434
Alignment:
Q  387 aatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgcta 441  Q
    |||||||||||||||||||||||||||||||| |||| | |  ||||||||||||    
T  21958380 aatgtagcctatgaggtacggctcatagtaacaaatgcgtagactccgtttgcta 21958434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 448
Target Start/End: Original strand, 26725872 - 26726314
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||     
T  26725872 ctttggggatcaattataattatgttagattattgagataacatgaataattagaccatttttatgattacttgccgattgtgcaagcatgactatcata 26725971  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttat 218  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26725972 ccatatgaatggtacatttgaaacagaatagatatgagattgtagaatgattatttttgaattaggtattcttatttttttattctaaaatctcatttat 26726071  T
Q  219 gttaat-aagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaag---------- 307  Q
    |||||| || ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| |||||||||              
T  26726072 gttaataaaatatgtttatgctagtataaatgttggatgggaattctatcaacgcaattgatgtaaataattatagtaatcatttgaaagaaaattgtaa 26726171  T
Q  308 ----------aaaattgaaatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatctccgtttgctacaacgaagagataatgtagccta 397  Q
              |||||||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||||||      
T  26726172 tgtgaaaaaaaaaattgaaatgagtaacatgctcatagaaagaaa-----aaaaattgagaaaaactccgtttgctacaacgaagagataatgtagcc-- 26726264  T
Q  398 tgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26726265 tgaggtacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 26726314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 19 - 448
Target Start/End: Original strand, 26619959 - 26620401
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||     
T  26619959 ctttggggatcaattataattatgttagattattgagataacatgaataattagaccatttttatgattacttgccgattgtgcaagcatgactatcata 26620058  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttat 218  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26620059 ccatatgaatggtacatttgaaacagaatagatatgagattgtagaatgattatttttgaattaggtattcttatttttttattctaaaatctcatttat 26620158  T
Q  219 gttaat-aagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaag---------- 307  Q
    |||||| || ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| |||||||||              
T  26620159 gttaataaaatatgtttatgctagtataaatgttggatgggaattctatcaacgcaattgatgtaaataattatagtaatcatttgaaagaaaattgtaa 26620258  T
Q  308 ----------aaaattgaaatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatctccgtttgctacaacgaagagataatgtagccta 397  Q
              |||||||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||||||||||||||      
T  26620259 tgtgaaaaaaaaaattgaaatgagtaacatgctcatagaaagaaa-----aaaaattgagaaaaactccgtttgctacaacgaagagataatgtagcc-- 26620351  T
Q  398 tgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  26620352 tgaggtacggctcatagtaacgaatgtgaaa-cttcgtttgctacaacgaa 26620401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 157 - 448
Target Start/End: Complemental strand, 28145541 - 28145249
Alignment:
Q  157 atagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtatgtttatgctagtataaatgttggagg 256  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28145541 atagtagaataattatttttgaattaggtatccttatttgtttattctaaaatctcattcatgttaataagtatgtttatgctagtataaatgttggagg 28145442  T
Q  257 gaaattctatcaacgcaattgatgtatataattatagtaataatttgaaagaaaattgaaatgagtaacatgctcatagaaagaaag-nnnnnnnnnttg 355  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||          |||    
T  28145441 gaaattctatcaacgcaattgatgtatataattatagtaatgatttgaaagaaaattgaaatgagtaacatgctcatagaaagaaagaaaaaaaaaattg 28145342  T
Q  356 agaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  28145341 agaaaatctccgtttgctacaacgaagagataatgtagtctatgaggtacggctcatagtaacgaatgcaaaatctccgtttgctacaacgaa 28145249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 85 - 276
Target Start/End: Original strand, 5130574 - 5130766
Alignment:
Q  85 attacttgccgattgtgcaagcatgactatcatgccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattagg 184  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||| |||||||||    
T  5130574 attacttgccgattgtgcaagcatgactatcataccatatgaatggtacatttgaaacagaattgatatgagatagtagaatgattatttctgaattagg 5130673  T
Q  185 tattcttatttgtttattctaaaatctcatttatgttaataagtatgtttatg-ctagtataaatgttggagggaaattctatcaacgcaatt 276  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  5130674 tatccttatttgtttattctaaaatctcatttatgttaataaatatgtttatgcctagtataaatgttggaggggaattctatcaacgcaatt 5130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 5249545 - 5249811
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    ||||||||||| ||||||| |||||||  ||||||||||||||| || ||||||||||||||||  |||||||| |  || ||||||||||||||| |||    
T  5249545 ctttggggatcgattatgaatatgttagattattgagataacatcaataattagaccatttttatgattacttgtcttttatgcaagcatgactattatg 5249644  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatag-tagaataattatttttgaattaggtattcttatttgtttattctaaaatctcattta 217  Q
    |||||||||||||||||||||| |||||||||||  |||||| |||| | ||||||| |  |||||| |  |||| ||||||||||||||||||| ||||    
T  5249645 ccatatgaatggtacatttgaaacagaataaatacaagatagttagagtgattatttcttgattaggcacccttacttgtttattctaaaatctctttta 5249744  T
Q  218 tgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatata 286  Q
    |||||||||||||||| ||| |||||||||||||||||||||||  || ||||||||||||||||||||    
T  5249745 tgttaataagtatgttgatgttagtataaatgttggagggaaat--tagcaacgcaattgatgtatata 5249811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 31 - 306
Target Start/End: Original strand, 29934141 - 29934415
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| ||||||||||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||||     
T  29934141 attatgattatgttagattaatgagataacatgaataattagaccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatga 29934240  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtat 230  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| |||| ||||||   ||||| | ||||||||||||||| |||||||||||||||||    
T  29934241 tacatttgaaacagaatagatatgagatagtagaatgattatttctgaactaggtacaattattag-ttattctaaaatctcttttatgttaataagtat 29934339  T
Q  231 gtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaa 306  Q
    ||||||| ||| |||| ||||||||||||||| ||||||  | |||||| | ||||||||| ||||| ||||||||    
T  29934340 gtttatgttagcataattgttggagggaaattttatcaagacgattgatatgtataattatggtaatgatttgaaa 29934415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 31 - 306
Target Start/End: Original strand, 34255047 - 34255321
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| |||||| |||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||||     
T  34255047 attatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatga 34255146  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtat 230  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| |||| ||||||   ||| || |||||||||||||||| |||||||||||||||||    
T  34255147 tacatttgaaacagaatagatatgagatagtagaatgattatttctgaactaggtacaatta-ttatttattctaaaatctcttttatgttaataagtat 34255245  T
Q  231 gtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaa 306  Q
    ||||||| ||| |||| ||||||||||||||| ||||||  |||||||| | ||||||||| ||||| ||||||||    
T  34255246 gtttatgttagcataattgttggagggaaattttatcaagacaattgatatgtataattatggtaatgatttgaaa 34255321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 28223184 - 28223000
Alignment:
Q  20 tttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgc 119  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||| |||||||||     
T  28223184 tttggggatcaattatgattatgttagattatcgagataacatgaataattagaccatttttatgattacttgccaattgtgcaagcataactatcatgt 28223085  T
Q  120 catatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattct 204  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||    
T  28223084 catatgaatggtatatttgaaacagaataaatatgagatagtagaatgattatttatgaattagatatccttatttgtttattct 28223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 286
Target Start/End: Complemental strand, 8520323 - 8520057
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    ||||||||||| |||||||||| ||||  ||||||||||||||| || ||||||||||||||||  |||  ||| |  |||||||||||||||||| |||    
T  8520323 ctttggggatcgattatgattaggttagattattgagataacataaataattagaccatttttatgattttttgacttttgtgcaagcatgactattatg 8520224  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagt-agaataattatttttgaattaggtattcttatttgtttattctaaaatctcattta 217  Q
    ||||||||||||||||||||||  ||||||||||| ||||||| ||||| ||||||| |  |||||| |  |||| |||||||||||| |||||| ||||    
T  8520223 ccatatgaatggtacatttgaagtagaataaatataagatagttagaatgattatttcttgattaggcacccttacttgtttattctacaatctctttta 8520124  T
Q  218 tgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatata 286  Q
    |||||||||||||||||| | |||||||||||||||||||||||  || |||  |||||||||||||||    
T  8520123 tgttaataagtatgtttacgttagtataaatgttggagggaaat--tagcaagacaattgatgtatata 8520057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 33295713 - 33296014
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||| |||| |||||||||||| ||| ||||| |||||||||||| ||||||||||||||  || |||||||||  |||| ||| |||| || | |||    
T  33295713 ctttggagatcgattatgattatgctacattattaagataacatgaataattagaccattttatga-ttacttgccttttgtacaaacatgtctgttatg 33295811  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagt-agaataattatttttgaattaggtattcttatttgtttattctaaaatctcattta 217  Q
    ||||||||||||||||||||||  ||||||||||| ||||||| || || ||||||| |  |||||| |  |||  ||||||||||||||||||  ||||    
T  33295812 ccatatgaatggtacatttgaagtagaataaatataagatagttaggatgattatttcttcattaggcacccttgcttgtttattctaaaatctatttta 33295911  T
Q  218 tgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatg--tatataattatagtaataatttgaaagaaaa-ttg 314  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||  || | || |||||||||  |||||| |||||| ||| ||||||||||||| |||    
T  33295912 tgttaataagtatgttgatgttagtataaatgtcggagggaaat--tagccacacaattgatgtatatatacttatagaaatgatttgaaagaaaagttg 33296009  T
Q  315 aaatg 319  Q
    |||||    
T  33296010 aaatg 33296014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 34255452 - 34255546
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  34255452 ttgataaaatctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 34255546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 28145625 - 28145540
Alignment:
Q  43 ttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaat 128  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28145625 ttactttattgagataacatgaataattagaccatttttagaattactcgccgattgtgcaagcatgactatcatgccatatgaat 28145540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 28145200 - 28145118
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaac 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  28145200 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacaaatgtgaaaactccgtttgctacaac 28145118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 29934543 - 29934637
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  29934543 ttgataaaatctccatttgctacaacgaagagataatgtagcctatgaggaaccgctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 29934637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 366 - 448
Target Start/End: Original strand, 26620386 - 26620468
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  26620386 cgtttgctacaacgaagagataatgtagcctatgaggtacggcttatagtaacgaatgcgaaaactccgtttgctacaacgaa 26620468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 366 - 448
Target Start/End: Original strand, 26726365 - 26726447
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  26726365 cgtttgctacaacgaagagataatgtagcctatgaggtacggcttatagtaacgaatgcgaaaactccgtttgctacaacgaa 26726447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 28145272 - 28145182
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||  |||||||||||||||||||    
T  28145272 aaaatctccgtttgctacaacgaagagataatgtagcctatgatgtacggctcatagtaacaaatgcgaagactccgtttgctacaacgaa 28145182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 26726296 - 26726380
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  26726296 ctccgtttgctacaacgaagagataatgtagcttatgaggtacggctcatagtaacgaatgtgaaa-cttcgtttgctacaacgaa 26726380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 34255598 - 34255678
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  34255598 gtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 34255678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 34255528 - 34255612
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||| ||| |||||||||||||||    
T  34255528 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcaaagtaacaaatgtgaaa-ctctgtttgctacaacgaa 34255612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 441
Target Start/End: Complemental strand, 6406658 - 6406571
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgcta 441  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||  |||||||||||    
T  6406658 ttgagaaaa-ctctgtttgctacaacgaagagataatgtagcctatgaggtacgactcataataacaaatgtgaaaaatccgtttgcta 6406571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 5249934 - 5250029
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||  || |||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||| |||  ||||||||||||||    
T  5249934 ttgagaaaaattctgtttgctacaacgaagagataatgtagtgtatgaggtacggctcatagtaacaaatgcgaaaactctatttgctacaacgaa 5250029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 29934619 - 29934674
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29934619 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 29934674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 368 - 448
Target Start/End: Original strand, 5250016 - 5250098
Alignment:
Q  368 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaa-tgtg-aaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| |||| ||||||||||||||    
T  5250016 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaactgagaaaaactccatttgctacaacgaa 5250098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 448
Target Start/End: Original strand, 31113057 - 31113240
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctcatagaaagaaagnnnnnnnnn------ttgagaaaatct 364  Q
    |||||||| |||||| |||||  ||| || |||||||||| |||||||||||||||||||||||||||||||                ||||||||| ||    
T  31113057 caattgatttatatacttataaaaatgatgtgaaagaaaaattgaaatgagtaacatgctcatagaaagaaaaataataataataaaattgagaaaa-ct 31113155  T
Q  365 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtg-aaatctccgtttgctacaacgaa 448  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| ||| |||  ||||||||||||||    
T  31113156 ctgtttgctacaacgaagagataatgtagcctatgaggtatagctcatagtaacaaatgtgaaaacctctatttgctacaacgaa 31113240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 26620450 - 26620505
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26620450 ctccgtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaac 26620505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 26726429 - 26726484
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26726429 ctccgtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaac 26726484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 28145133 - 28145078
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  28145133 ctccgtttgctacaacaaagagataatgtagcctatgaggtacagctcatagtaac 28145078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 34255660 - 34255714
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  34255660 ctccgtttgctacaacgaagagataatgtagcctatgaggaacgactcatagtaa 34255714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 354 - 417
Target Start/End: Original strand, 5250071 - 5250134
Alignment:
Q  354 tgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  5250071 tgagaaaaactccatttgctacaacgaagaaataatgtagcctatgaggtacaactcatagtaa 5250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 448
Target Start/End: Complemental strand, 6406570 - 6406495
Alignment:
Q  373 tacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||| |||| | |  ||||||||||||||    
T  6406570 tacaatgaagaaataatgtagcctatgaggtacggctcatagtaacaaatgcgaaaacactctttgctacaacgaa 6406495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 28222857 - 28222810
Alignment:
Q  189 cttatttgtttattctaaaatctcatttatgttaataagtatgtttat 236  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28222857 cttatttgtttattctataatctcatttatgttaataagtatgtttat 28222810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 407
Target Start/End: Original strand, 33296087 - 33296127
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacgg 407  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  33296087 gtttgctacaacgaagagataatgtagcctatgagatacgg 33296127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 31113227 - 31113277
Alignment:
Q  368 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||| ||||    
T  31113227 tttgctacaacgaagagataatgtagcttatgaggtatgactcatattaac 31113277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 28146286 - 28146253
Alignment:
Q  19 ctttggggatcaattatgattatgttactttatt 52  Q
    ||||||||||||||||||||||||||||||||||    
T  28146286 ctttggggatcaattatgattatgttactttatt 28146253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 19 - 448
Target Start/End: Complemental strand, 51844893 - 51844451
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| ||||||| | | ||||  ||||||||||||||||||||||||||||||||||    
T  51844893 ctttggggatcaattatgattatattagattattgagataacatgaataattagatcctctttatgattacttgccgattgtgcaagcatgactatcatg 51844794  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattct-aaaatctcattta 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||| |||||||||||||    
T  51844793 ccatatgaatggtacatttgaaacagaataaatatgagatagtagaatgattatttctgaattaggtatccttaattgtttattctaaaaatctcattta 51844694  T
Q  218 tgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaagaaaa------ 311  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||          
T  51844693 tgttaataagtatgtttatgctagtataaatgtgggagacaaattctatcaacgcaattgatgtatataatcatactaatgatttgaaagaaaattgaaa 51844594  T
Q  312 ------------ttgaaatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatctccgtttgctacaacgaagagataatgtagcctatg 399  Q
                |||||||||||||||||||||||||||||||          |||||||||||| |||||| || || |||||||||||||||||||||    
T  51844593 tgagtagaaaatttgaaatgagtaacatgctcatagaaagaaa------aaaattgagaaaatcttcgtttgttataatgaagagataatgtagcctatg 51844500  T
Q  400 aggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  51844499 aggtacgactcataataacgaatgcgaaatctccgtttgctacaacgaa 51844451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 323
Target Start/End: Original strand, 14114329 - 14114622
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  14114329 ctttggggatcaattatgattatgttagattattgagataacatgaacaattagaccatttttatgattactttccgattgtgcaagcatgactatcatg 14114428  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttat 218  Q
    ||| | |||||||||||||||| || ||| |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||     
T  14114429 cca-aggaatggtacatttgaaacaaaattaatatgagatagtagaatgattatttctgaattaggtatccttatttgtttattctaaaatctcattta- 14114526  T
Q  219 gttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaagaaaattgaaat 318  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14114527 ---------tatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaatgatttgaaagaaaattgaaat 14114617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 448
Target Start/End: Complemental strand, 51844473 - 51844384
Alignment:
Q  359 aaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  51844473 aaatctccgtttgctacaacgaagagataatgtagcttatgaggtacggctcatagtaacgaatgcgaaatctccgtttgctacagcgaa 51844384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 272 - 448
Target Start/End: Complemental strand, 15088787 - 15088603
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaagaa-aattgaaatgagtaacatgctcatagaaagaaagnnnnnnnnn-------ttgagaaaatc 363  Q
    ||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||                ||||||||||     
T  15088787 caattgatgtatatacttatagaaattatttgaaagaagaattgaaatgagtaacatgctcgtagaaagaaagaaaaagaaaaaaaaaattgagaaaata 15088688  T
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||  ||| |||||||||||| ||||||    
T  15088687 tccgtttgctacaatgaagagataatgtagtctatgaggtacggctcatagtaacaaatgcaaaaactccgtttgctaaaacgaa 15088603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 272 - 448
Target Start/End: Complemental strand, 22211395 - 22211211
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaagaa-aattgaaatgagtaacatgctcatagaaagaaagnnnnnnnnn-------ttgagaaaatc 363  Q
    ||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||                ||||||||||     
T  22211395 caattgatgtatatacttatagaaattatttgaaagaagaattgaaatgagtaacatgctcgtagaaagaaagaaaaagaaaaaaaaaattgagaaaata 22211296  T
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||  ||| |||||||||||| ||||||    
T  22211295 tccgtttgctacaatgaagagataatgtagtctatgaggtacggctcatagtaacaaatgcaaaaactccgtttgctaaaacgaa 22211211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 355 - 448
Target Start/End: Complemental strand, 22207890 - 22207797
Alignment:
Q  355 gagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||    
T  22207890 gagaaaaacttcgtttgctacaacgaagagataatgtagcctatgagttacggctcatagtaattaatgtgaaaactccgtttgctacaacgaa 22207797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 22208014 - 22207933
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  22208014 gtttgctacaaccaagagataatgtagcctatgaggtacggctcatagtaattaatgtgaaaactccgtttgctacaacgaa 22207933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 355 - 448
Target Start/End: Complemental strand, 22207754 - 22207661
Alignment:
Q  355 gagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||  |||||||| |||||||||    
T  22207754 gagaaaaacttcgtttgctacaacgaagagataatgtagcctatgagatacggctcatagtaataaatgtgaaaattccgtttgttacaacgaa 22207661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 22208148 - 22208067
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  | ||||||||||||||||    
T  22208148 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaataaatgtgaaaatttcgtttgctacaacgaa 22208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 14114680 - 14114777
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaa-tgtg-aaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| || || | ||| |||||||||||||||||||    
T  14114680 ttgagaaaatctccgtttgctacaatgaagagataatgtaacctatgaggtacgactcatagtaacaaattgagaaaaactccgtttgctacaacgaa 14114777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 353 - 418
Target Start/End: Original strand, 14114749 - 14114814
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  14114749 ttgagaaaaactccgtttgctacaacgaagagataatgtagcctataaggtacgactcatagtaac 14114814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 51844406 - 51844337
Alignment:
Q  359 aaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaa 428  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  51844406 aaatctccgtttgctacagcgaagagataatgtagcctatgaggtacgactcatagtaacaaatgcgaaa 51844337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 22208082 - 22208030
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22208082 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 22208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 22207951 - 22207896
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22207951 ctccgtttgctacaacgaagagataatgtaacctatgaggtacggctcatagtaac 22207896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 15088626 - 15088567
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  15088626 aaaaactccgtttgctaaaacgaagagataatgtagcatatgaggtacggctcatagtaa 15088567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 22207815 - 22207760
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  22207815 ctccgtttgctacaacgaagagataatgtagcctatgaggtacgacttatagtaac 22207760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 22211234 - 22211175
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  22211234 aaaaactccgtttgctaaaacgaagagataatgtagcatatgaggtacggctcatagtaa 22211175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 353 - 418
Target Start/End: Original strand, 14114818 - 14114883
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||| ||| |||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  14114818 ttgagaaaaactctgtttgctacaacgaagagataatgtagcttacgaggtacgactcatagtaac 14114883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 22207678 - 22207625
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  22207678 tccgtttgttacaacgaagagataatgtagcatatgaggtacggctcatagtaa 22207625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 14114903 - 14114954
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14114903 gtttgctacaacgaagagataatgtagcctacgaggtgcggctcatagtaac 14114954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 49 - 297
Target Start/End: Original strand, 20809986 - 20810234
Alignment:
Q  49 tattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatggtacatttgaatcagaata 148  Q
    ||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20809986 tattgagataacatgaataattagaccatttttatgattacctgccgattgtgcaagcatgactatcatgccatatgaatggtacatttgaaacagaata 20810085  T
Q  149 aatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtatgtttatgctagtataaat 248  Q
     |||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20810086 tatataagatagtagaatgattatttctgaattaggtatccttatttgtttattctaaaatctcatttatgttaataagtatgtttatgctagtataaat 20810185  T
Q  249 gttggagggaaattctatcaacgcaattgatgtatataattatagtaat 297  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20810186 gttggagggaaattctatcaacgcaactgatgtatataattatagtaat 20810234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 31 - 306
Target Start/End: Complemental strand, 5558484 - 5558212
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| |||||| |||||||||  ||| |||| |  |||||||||||||||||  ||| ||||||||||     
T  5558484 attatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtgcaagcatgactactatgtcatatgaatga 5558385  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtat 230  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| |||| ||||||   ||||| | ||||||||||||||  |||||||||||||||||    
T  5558384 tacatttgaaacagaatagatatgagatagtagaatgattatttctgaactaggtacaattattag-ttattctaaaatct--tttatgttaataagtat 5558288  T
Q  231 gtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaa 306  Q
    ||||||| ||| |||| ||||||||||||||| ||||||   ||||||| | ||||||||| ||||| ||||||||    
T  5558287 gtttatgttagcataattgttggagggaaattttatcaagataattgatatgtataattatggtaatgatttgaaa 5558212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 308 - 448
Target Start/End: Original strand, 20810286 - 20810423
Alignment:
Q  308 aaaattgaaatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacgg 407  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  20810286 aaaattgaaatgagtaacatgctcatagaaagaaagaaaaaa---ttgagaaaatatccgtttgctacaacgaagagataatgtagcctatgaggtatgg 20810382  T
Q  408 ctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
     ||||||||||||||||||||| || |||||||||||||||    
T  20810383 ttcatagtaacgaatgtgaaatatctgtttgctacaacgaa 20810423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5557874 - 5557790
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  5557874 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 5557790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5557808 - 5557724
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  5557808 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaatgaatgtgaaa-ctccgtttgctacaacgaa 5557724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 25336721 - 25336636
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  25336721 ctccgtttgctacaacgaaaagataatgtagcctatgaggtacggctcatagtaacaaatgtgaaaactctgtttgctacaacgaa 25336636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 5557936 - 5557856
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  5557936 gtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 5557856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 25336650 - 25336569
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||||||    
T  25336650 gtttgctacaacgaagagataatgtagcctatgaggtacaactcatagtaacaaatgtgaaaactccgtttgctacaacgaa 25336569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 353 - 448
Target Start/End: Complemental strand, 5558083 - 5557989
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| |||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||| |||||||||||||||||||    
T  5558083 ttgataaaaactccgtttgctacaacgaagagataatgtagccgatgaggaacgactcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 5557989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5558007 - 5557922
Alignment:
Q  363 ctccgtttgctacaacgaa-gagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||    
T  5558007 ctccgtttgctacaacgaaagagataatgtagcctatgaggaacggctcatagtaacaaatgtgaaa-ctctgtttgctacaacgaa 5557922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 368 - 448
Target Start/End: Original strand, 3166007 - 3166087
Alignment:
Q  368 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| | ||| |||||||||||||    
T  3166007 tttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaacaagtgtgaaaacaccgcttgctacaacgaa 3166087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 3165806 - 3165887
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||  ||| ||| |||||||||||||||    
T  3165806 gtttgctacaacgaagagataatgtagcttatgaggtacgtctcatagtaacaagtgcaaaaactctgtttgctacaacgaa 3165887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 25336521 - 25336472
Alignment:
Q  368 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25336521 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 25336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 20810409 - 20810460
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20810409 gtttgctacaacgaagagataatgtagcctatgaggtacgggtcatagtaac 20810460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 5557742 - 5557688
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  5557742 ctccgtttgctacaacgaagagataatgtagcctataaggtacagctcatagtaa 5557688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 358 - 443
Target Start/End: Original strand, 3165864 - 3165949
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctaca 443  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||  ||| ||| ||||||||||    
T  3165864 aaaaactctgtttgctacaacgaagagataatgtagcttatgaggtacgtctcatagtaacaattgcaaaaactctgtttgctaca 3165949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 369 - 418
Target Start/End: Original strand, 3166075 - 3166124
Alignment:
Q  369 ttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3166075 ttgctacaacgaagagataatgtagcctataaggtacggctcatagtaac 3166124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 26082154 - 26082094
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatg 423  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| ||||    
T  26082154 ctccgtttgctacaacggagagataatgtagcctatgaggtacgactcatattaacaaatg 26082094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 26082084 - 26082037
Alignment:
Q  365 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcat 412  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  26082084 ccgtttgctacaacgaagtgataatgtagcctatgaggtacggctcat 26082037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 3165931 - 3166020
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||||||| | || ||||  ||| ||||||||||||||    
T  3165931 aaaaactctgtttgctaca-cgaagagataatgcagcctatgaggtacgactcatagtaacaagtgcgaaaattccatttgctacaacgaa 3166020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 25336587 - 25336508
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||     |||||||||||||||| |||| |||| || | ||||||||||||||    
T  25336587 ctccgtttgctacaacgaagagataatgtagccta-----tacggctcatagtaacaaatgcgaaa-cttcatttgctacaacgaa 25336508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 4844047 - 4844124
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaa 444  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||| |||| |||| |||  | |||||||||||||    
T  4844047 cgtttgttacaacgaatagataatgtagcctatgaggtac-gctcataataacaaatgggaacacaccgtttgctacaa 4844124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 406
Target Start/End: Original strand, 21542084 - 21542118
Alignment:
Q  372 ctacaacgaagagataatgtagcctatgaggtacg 406  Q
    |||||||||||||||||||||||||||||||||||    
T  21542084 ctacaacgaagagataatgtagcctatgaggtacg 21542118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 21542145 - 21542197
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtac-ggctcatagtaa 417  Q
    ||||||||||||| ||||||||||||||| ||||||||||  |||||||||||    
T  21542145 cgtttgctacaacaaagagataatgtagcttatgaggtacatgctcatagtaa 21542197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 25336829 - 25336771
Alignment:
Q  275 ttgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctca 332  Q
    |||||||||||  |||||| ||| ||||||||||||| |||||||||||||||| ||||    
T  25336829 ttgatgtatattcttatagaaatgatttgaaagaaaaattgaaatgagtaacatactca 25336771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 4844112 - 4844165
Alignment:
Q  365 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||  |||||||||  |||||||  |||||||||||||||||||    
T  4844112 ccgtttgctacaaaaaagagataacatagcctacaaggtacggctcatagtaac 4844165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 5e-69; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 34 - 306
Target Start/End: Original strand, 2742916 - 2743187
Alignment:
Q  34 atgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatggtac 133  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||||  ||| |||| |  |||||||||||||||||  |||||||||||||| |||    
T  2742916 atgattatgttagtttaatgagataacatgaataattagaccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatgatac 2743015  T
Q  134 atttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtatgtt 233  Q
     |||||| ||||||| ||||||||||||||||| ||||||| |||| ||||||   ||||| | ||||||||||||||| ||||||||||||||||||||    
T  2743016 ttttgaaacagaatagatatgagatagtagaatgattatttctgaactaggtacaattattag-ttattctaaaatctcttttatgttaataagtatgtt 2743114  T
Q  234 tatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaa 306  Q
    |||| ||| |||| ||||||||||||||| ||||||  |||||||| | ||||||||| ||||| ||||||||    
T  2743115 tatgttagcataattgttggagggaaattttatcaagacaattgatatgtataattatggtaatgatttgaaa 2743187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 2743310 - 2743404
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  2743310 ttgataaaatctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 2743404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 2743386 - 2743470
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  2743386 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 2743470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 2743452 - 2743536
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  2743452 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 2743536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 31315099 - 31315018
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||    
T  31315099 gtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaaaaaatgtgaaaactccgtttgctacaacgaa 31315018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 31346953 - 31347038
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||||||    
T  31346953 ctccgtttgctacaacgaagagataatgtagcctataaggtacgactcatagtaaaaaatgtgaaaactccgtttgctacaacgaa 31347038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 31347020 - 31347105
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||| |||||||||||||||||||    
T  31347020 ctccgtttgctacaacgaagagataatgtagcatatgagatacggctcatagtaaaaaatgtgaaaactccgtttgctacaacgaa 31347105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 428
Target Start/End: Complemental strand, 31315036 - 31314971
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaa 428  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31315036 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacaaatgtgaaa 31314971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 448
Target Start/End: Original strand, 31346754 - 31346918
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatctccgttt 370  Q
    |||||||| |||||| |||||  ||| ||||||||||||| |||||||| ||||||||||||||| || |||           || ||||| ||| ||||    
T  31346754 caattgatttatatacttatataaattatttgaaagaaaaattgaaatgcgtaacatgctcatagtaaaaaa-----------tgtgaaaa-ctctgttt 31346841  T
Q  371 gctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||| ||||||||||    
T  31346842 gctacaacgaagagataatgtagcctatgaggtacgactcatagtaacaaatgtgaaa-atccgttttctacaacgaa 31346918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 31315240 - 31315155
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagt-aacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| ||| |||||||||||||||    
T  31315240 tccgtttgctacaacgaagagataatgtagcctatgaggtatggctcatagtaaaaaaatgtgaaaactctgtttgctacaacgaa 31315155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 2743518 - 2743573
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2743518 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 2743573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 412
Target Start/End: Original strand, 31347087 - 31347136
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcat 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31347087 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcat 31347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 423
Target Start/End: Original strand, 11951280 - 11951338
Alignment:
Q  365 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatg 423  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  11951280 ccgtttgctacaacgaagagataatgtagcctatgagatacgactcatagtaacaaatg 11951338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 417
Target Start/End: Complemental strand, 31315169 - 31315119
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31315169 gtttgctacaacgaagagataatgtagcctatgaggtactgctcatagtaa 31315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 398
Target Start/End: Original strand, 31346901 - 31346935
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctat 398  Q
    ||||||| |||||||||||||||||||||||||||    
T  31346901 tccgttttctacaacgaagagataatgtagcctat 31346935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 31346934 - 31346971
Alignment:
Q  411 atagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  31346934 atagtaacaaatgtgaaaactccgtttgctacaacgaa 31346971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 31 - 306
Target Start/End: Original strand, 26300 - 26574
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| |||||| |||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||||     
T  26300 attatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatga 26399  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtat 230  Q
    |||||||||| || |||| ||||||||||||||||| ||||||| |||| ||||||   ||||| | ||||||||||||||| |||||||||||||||||    
T  26400 tacatttgaaacaaaatagatatgagatagtagaatgattatttatgaactaggtacaattattag-ttattctaaaatctcttttatgttaataagtat 26498  T
Q  231 gtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaa 306  Q
    ||||||| ||| |||| ||||||||||||||| ||||||  |||||||| | ||||||||| ||||| ||||||||    
T  26499 gtttatgttagcataattgttggagggaaattttatcaagacaattgatatgtataattatggtaatgatttgaaa 26574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 23682 - 23498
Alignment:
Q  20 tttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgc 119  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||| |||||||||     
T  23682 tttggggatcaattatgattatgttagattatcgagataacatgaataattagaccatttttatgattacttgccaattgtgcaagcataactatcatgt 23583  T
Q  120 catatgaatggtacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattct 204  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||    
T  23582 catatgaatggtatatttgaaacagaataaatatgagatagtagaatgattatttatgaattagatatccttatttgtttattct 23498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 23355 - 23308
Alignment:
Q  189 cttatttgtttattctaaaatctcatttatgttaataagtatgtttat 236  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23355 cttatttgtttattctataatctcatttatgttaataagtatgtttat 23308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 1e-63; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 31 - 306
Target Start/End: Complemental strand, 41529106 - 41528832
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| |||||| |||||||||  ||| |||| |  |||||||||||||||||  ||| ||||||||||     
T  41529106 attatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtgcaagcatgactactatgtcatatgaatga 41529007  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattatttttgaattaggtattcttatttgtttattctaaaatctcatttatgttaataagtat 230  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||| |||| ||| ||   ||||| | ||||||||||||||| |||||||||||||||||    
T  41529006 tacatttgaaacagaatagatatgagatagtagaatgattatttctgaactagatacaattattag-ttattctaaaatctcttttatgttaataagtat 41528908  T
Q  231 gtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatataattatagtaataatttgaaa 306  Q
    ||||||| ||| |||| ||||||||||||||| ||||||  |||||||| | ||||||||| ||||| ||||||||    
T  41528907 gtttatgttagcataattgttggagggaaattttatcaagacaattgatatgtataattatggtaatgatttgaaa 41528832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 319
Target Start/End: Original strand, 37368454 - 37368751
Alignment:
Q  19 ctttggggatcaattatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatg 118  Q
    |||||| |||| |||||||||||| ||  ||||| |||||||||||| ||||||||||||||  || |||||||||  |||||||| | || || | |||    
T  37368454 ctttggagatcgattatgattatgctagattattaagataacatgaataattagaccattttatga-ttacttgccttttgtgcaaacgtgtctgttatg 37368552  T
Q  119 ccatatgaatggtacatttgaatcagaataaatatgagatagt-agaataattatttttgaattaggtattcttatttgtttattctaaaatctcattta 217  Q
    ||||||||||||||||||||||  ||||||||||  ||||||| ||||| ||||| | |  |||||| |  |||| |||||||||||||||||||  | |    
T  37368553 ccatatgaatggtacatttgaagtagaataaata--agatagttagaatgattatatcttgattaggcacccttacttgtttattctaaaatctc--tca 37368648  T
Q  218 tgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatg--tatataattatagtaataatttgaaagaaaa-ttg 314  Q
    |||||||||||||||| ||| |||||||||||||||||||||||  || ||||||||||||||  |||||| |||||| ||| ||||||||||||| |||    
T  37368649 tgttaataagtatgttgatgttagtataaatgttggagggaaat--tagcaacgcaattgatgtatatatacttatagaaatgatttgaaagaaaagttg 37368746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 353 - 448
Target Start/End: Complemental strand, 41528703 - 41528609
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  41528703 ttgataaaaactccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 41528609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 41528561 - 41528477
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  41528561 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 41528477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 41528627 - 41528543
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  41528627 ctccgtttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacaaatgtgaaa-ctccgtttgctacaacgaa 41528543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 41528495 - 41528441
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41528495 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 41528441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 37368922 - 37369004
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagt-aacgaatgtgaaatctccgtttgctacaac 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||| |||  ||||||| |||||||    
T  37368922 tccgtttgctacaacgaagagataatgtagcctatgaggtacggcttacagtaaacaaatgtaaaaaatccgtttactacaac 37369004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 37368990 - 37369048
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaat 422  Q
    ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37368990 tccgtttactacaacaaagagataatgtagcctatgaggtacgactcatagtaacgaat 37369048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 97 - 286
Target Start/End: Complemental strand, 91031 - 90843
Alignment:
Q  97 ttgtgcaagcatgactatcatgccatatgaatggtacatttgaatcagaataaatatgagatagt-agaataattatttttgaattaggtattcttattt 195  Q
    ||||||||||||  |||| ||||||||||||||||||||||||| |||||||| ||  ||||||| ||||| ||||||| |  |||||| |  |||| ||    
T  91031 ttgtgcaagcattcctattatgccatatgaatggtacatttgaaacagaataagtacaagatagttagaatgattatttcttgattaggcacccttactt 90932  T
Q  196 gtttattctaaaatctcatttatgttaataagtatgtttatgctagtataaatgttggagggaaattctatcaacgcaattgatgtatata 286  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||  || ||||||||||||| ||||||    
T  90931 gtttattctaaaatctcttttatgttaataagtatgttgatgttagtataaatgttggagggaaat--tagcaacgcaattgatctatata 90843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 448
Target Start/End: Complemental strand, 90609 - 90514
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||| | ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| |||| ||  |||||||||||||||    
T  90609 ttgagaagaactctgtttgctacaacgaagagataattttgcctatgaggtacggctcatagtaacaaatgcgaaaactttgtttgctacaacgaa 90514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 90528 - 90477
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90528 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 90477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 90663 - 90613
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  90663 gtttgctacaacgaatagataatgtagcctatga-gtacggctcatagtaac 90613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 5938975 - 5938891
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  5938975 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacaaatgtgaaaactccgtttgctacaacgaa 5938891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5938909 - 5938824
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  5938909 ctccgtttgctacaacgaagagatgatgtagcctatgaggtacggctcatagtaacaaatgtgaaaactccgtttgctacaacgaa 5938824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 18111629 - 18111544
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  18111629 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaaaaaatgtgaaaactccgtttgctacaacgaa 18111544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 174
Target Start/End: Original strand, 14530182 - 14530325
Alignment:
Q  31 attatgattatgttactttattgagataacatgaacaattagaccatttttagaattacttgccgattgtgcaagcatgactatcatgccatatgaatgg 130  Q
    |||||||||||||||  ||| |||||||||||||| |||||| |||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||||     
T  14530182 attatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtgcaagcatgactactatgccatatgaatga 14530281  T
Q  131 tacatttgaatcagaataaatatgagatagtagaataattattt 174  Q
    |||||||||| || |||| ||||||||||||||||| |||||||    
T  14530282 tacatttgaaacataatagatatgagatagtagaatgattattt 14530325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 368 - 448
Target Start/End: Original strand, 14521046 - 14521125
Alignment:
Q  368 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  14521046 tttgctacaacgaagagataatgtagcctatgaggaacggctcatagtaacgaatgtgaaa-ctccgtttgctacaacgaa 14521125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5939043 - 5938958
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||  ||||||||||||||||||    
T  5939043 ctccgtttgctacaacgaagagataatgtagtctatgaggtacggctcatagtaataaatgtgaaaattccgtttgctacaacgaa 5938958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 18111562 - 18111477
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | |||||||||||||||||    
T  18111562 ctccgtttgctacaacgaagagataatgtagcctatgaggtaccgctcataataacaaatgtgaaaaccccgtttgctacaacgaa 18111477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 19384258 - 19384174
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  19384258 ctccgtttgctacgacgaagagataatgtaacctatgaggtacggctcatagtaacgaatgtgaaa-ctccgtttgctacgacgaa 19384174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 5938842 - 5938757
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||| ||| |||||||||||||||    
T  5938842 ctccgtttgctacaacgaagagataatatagcctatgaggtacgactcatagtaacaaatgcgaaaactcagtttgctacaacgaa 5938757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 19384375 - 19384302
Alignment:
Q  375 caacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  19384375 caacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgcgaaaactccgtttgctacgacgaa 19384302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 19441170 - 19441089
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||||||| |||||    
T  19441170 gtttgctacaacgaagagataatgtagcctatgaggtacggctcgtagtaacaaatgcgaaaactccgtttgctacgacgaa 19441089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 28034847 - 28034763
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| ||| |||||||||||||||    
T  28034847 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa-taatttgaaaactctgtttgctacaacgaa 28034763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 364 - 444
Target Start/End: Original strand, 2746785 - 2746865
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaa 444  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  2746785 tccgtttgctacaacgaagagataataaagcctatgaggtacggctcatagtaaaaaatgtgaaaactccgtttgctacaa 2746865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 363 - 443
Target Start/End: Complemental strand, 19384144 - 19384064
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctaca 443  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  19384144 ctccatttgctacgacgaagagataatgtagcctatgaggtacgactcatagtaacgaatgcgaaaactccgtttgctaca 19384064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 365 - 428
Target Start/End: Complemental strand, 18111493 - 18111430
Alignment:
Q  365 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaa 428  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18111493 ccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacaaatgtgaaa 18111430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 5835673 - 5835618
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5835673 ctccgtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaac 5835618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 14521107 - 14521162
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14521107 ctccgtttgctacaacgaagagataatgtagcgtatgaggtacggctcatagtaac 14521162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 421
Target Start/End: Complemental strand, 28034710 - 28034656
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaa 421  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28034710 gtttgctacaacgaagaaataatgtagcctatgaggtacggctcatagtaacgaa 28034656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 28034777 - 28034696
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||  |||| ||  |||||||||||||||    
T  28034777 gtttgctacaacgaagagataatgtagcctatgaggtacaactcatagtaacaaatccgaaaactttgtttgctacaacgaa 28034696  T

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Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 29897108 - 29897056
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29897108 cgtttgctacaacgaagaaataatgtagcctatgaggtacggctcatagtaac 29897056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 19479989 - 19480048
Alignment:
Q  364 tccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatg 423  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  19479989 tccgtttgctacaacgaagagataatatagcctatgaggtacgactcatagtaacaaatg 19480048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 29897162 - 29897111
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29897162 gtttgctacaacaaagagataatgtagcctatgaggtacggctcatagtaac 29897111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 448
Target Start/End: Complemental strand, 28034906 - 28034829
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||    
T  28034906 cgtttgctacaacgaagagata-----gcctatgaggtacggctcatagtaataaatttgaaaactccgtttgctacaacgaa 28034829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 19384320 - 19384240
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||| ||||||||||||||||||||||||     | |||||||||||||||| |||| ||||||||||||| |||||    
T  19384320 ctccgtttgctacgacgaagagataatgtagcctatga-----gtctcatagtaacgaatgcgaaaactccgtttgctacgacgaa 19384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 448
Target Start/End: Original strand, 45227234 - 45227314
Alignment:
Q  368 tttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||| ||||||||||||||||| |||||||||| || |||||||  ||||| ||| ||| |||||||||||||||    
T  45227234 tttgctacaatgaagagataatgtagcccatgaggtacgacttatagtaagaaatgtaaaaactctgtttgctacaacgaa 45227314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 418
Target Start/End: Complemental strand, 5938771 - 5938720
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  5938771 gtttgctacaacgaagagataatgtagactatgaggtacgactcatagtaac 5938720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 19441107 - 19441052
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  19441107 ctccgtttgctacgacgaagagataatgtagtctatgaggtacgactcatagtaac 19441052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 45227291 - 45227351
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacg-gctcatagtaa 417  Q
    |||| ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  45227291 aaaaactctgtttgctacaacgaagagataatgtagcctatgtggtacgtgctcatagtaa 45227351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 2746672 - 2746733
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctca 332  Q
    ||||||||||||||| |||||| ||| |||||||| |||| |||||||||||||||||||||    
T  2746672 caattgatgtatatacttatagaaatgatttgaaataaaaattgaaatgagtaacatgctca 2746733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 19384192 - 19384148
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacgg 407  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  19384192 ctccgtttgctacgacgaagagataatgtaacctatgaggtacgg 19384148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 418
Target Start/End: Complemental strand, 29897226 - 29897166
Alignment:
Q  358 aaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    |||| ||| ||||||||||||||||||||||| |||  |||||||||||| ||||||||||    
T  29897226 aaaaactctgtttgctacaacgaagagataatatagtttatgaggtacggttcatagtaac 29897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 342
Target Start/End: Complemental strand, 5939152 - 5939081
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaag-aaaattgaaatgagtaacatgctcatagaaagaaa 342  Q
    |||| |||||||||| |||||| ||| ||||||||| |||| ||||||||||||||| |||| |||||||||    
T  5939152 caatggatgtatatacttatagaaatgatttgaaagaaaaactgaaatgagtaacatactcaaagaaagaaa 5939081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 417
Target Start/End: Original strand, 19480059 - 19480110
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacg-gctcatagtaa 417  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  19480059 gtttcctacaatgaagagataatgtagcctatgaggtacgtgctcatagtaa 19480110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 5835782 - 5835714
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaag-aaaattgaaatgagtaacatgctcatagaaag 339  Q
    |||| |||||||||| |||||| ||| ||||||||| |||||||||||||||||| | |||| ||||||    
T  5835782 caatggatgtatatacttatagaaatgatttgaaagaaaaattgaaatgagtaacctactcaaagaaag 5835714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 19480125 - 19480177
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtac-ggctcatagtaa 417  Q
    |||||||||||||||||||||||||||| || ||||||||  |||||||||||    
T  19480125 cgtttgctacaacgaagagataatgtagtctttgaggtacatgctcatagtaa 19480177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 18111744 - 18111677
Alignment:
Q  272 caattgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctcatagaaa 338  Q
    |||||||||||||||   |||  ||| ||||||||||||| ||||||||||||||||||||| |||||    
T  18111744 caattgatgtatatacaaatataaattatttgaaagaaaaattgaaatgagtaacatgctcaaagaaa 18111677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 334
Target Start/End: Complemental strand, 19441291 - 19441229
Alignment:
Q  273 aattgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctcata 334  Q
    |||||||||||||| |  ||| ||| ||||||||||||| ||||||||| |||||||||||||    
T  19441291 aattgatgtatatactcgtagaaatgatttgaaagaaaaattgaaatgattaacatgctcata 19441229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 69771 - 69852
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||||||    
T  69771 gtttgctacaacgaagagataatgtagcctatgaggtacaactcatagtaacaaatgtgaaaactccgtttgctacaacgaa 69852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 448
Target Start/End: Original strand, 69608 - 69785
Alignment:
Q  273 aattgatgtatataattatagtaataatttgaaagaaaa-ttgaaatgagtaacatgctcatagaaagaaagnnnnnnnnnttgagaaaatc-tccgttt 370  Q
    |||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||| ||||| |||             | ||||   || ||||    
T  69608 aattgatgtatatacttatagaaatgatttgaaagaaaaattgaaatgagtaacatgctcaaagaaaaaaaaaataaaaaaagaaaaaaaaaatctgttt 69707  T
Q  371 gctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||  |||  || |||||||||||||||    
T  69708 gctacaatgaagagataatgtagcctatgaggtacggctcatagtaacaaatgacaaaaatctgtttgctacaacgaa 69785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 69834 - 69889
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||| |||||||||| | ||| |||||||||||    
T  69834 ctccgtttgctacaacgaagagataatatagcctatgatgcacgactcatagtaac 69889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 367 - 448
Target Start/End: Complemental strand, 3677 - 3596
Alignment:
Q  367 gtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||  |||||||||    
T  3677 gtttgctacaacgaagagataatgtagcctatgaggtacgggtcatagtaacaaatgtgaaaactccgtttattacaacgaa 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 3737 - 3663
Alignment:
Q  374 acaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||    
T  3737 acaacgaagagataatgtagcctatgaggtacggctcatagtaacaaatgtgaaaactttgtttgctacaacgaa 3663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 3614 - 3560
Alignment:
Q  363 ctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaa 417  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  3614 ctccgtttattacaacgaagagataatgtagcctatgaggtaaggctcatagtaa 3560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 448
Target Start/End: Original strand, 39922 - 40016
Alignment:
Q  353 ttgagaaaatctccgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaacgaatgtgaaatctccgtttgctacaacgaa 448  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||  | ||||||| |  ||||||||||||||||    
T  39922 ttgagaaaat-tctgtttgctacaacgaagagataatgtagcctatgaggtatgactcatagtaaaaattgtgaaaacatcgtttgctacaacgaa 40016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 40001 - 40053
Alignment:
Q  366 cgtttgctacaacgaagagataatgtagcctatgaggtacggctcatagtaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40001 cgtttgctacaacgaagagataatgtagcctatgaggtacgactcatagtaac 40053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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