View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18674_high_33 (Length: 403)

Name: NF18674_high_33
Description: NF18674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18674_high_33
NF18674_high_33
[»] chr5 (56 HSPs)
chr5 (160-383)||(20517240-20517459)
chr5 (8-138)||(41410881-41411010)
chr5 (8-138)||(1831064-1831193)
chr5 (8-141)||(30352006-30352139)
chr5 (8-138)||(40316531-40316660)
chr5 (8-138)||(14639650-14639780)
chr5 (7-140)||(40365822-40365958)
chr5 (8-139)||(26802036-26802166)
chr5 (8-139)||(26809586-26809716)
chr5 (8-139)||(26824613-26824743)
chr5 (8-94)||(40797007-40797093)
chr5 (8-94)||(1098218-1098304)
chr5 (8-94)||(13548256-13548342)
chr5 (8-94)||(20022903-20022989)
chr5 (8-94)||(20040350-20040436)
chr5 (8-94)||(41263064-41263150)
chr5 (8-94)||(19344634-19344720)
chr5 (8-94)||(30211676-30211762)
chr5 (19-94)||(1781091-1781166)
chr5 (8-94)||(14057751-14057837)
chr5 (8-94)||(14633050-14633136)
chr5 (8-94)||(30721620-30721706)
chr5 (8-94)||(31191112-31191198)
chr5 (8-94)||(33402526-33402612)
chr5 (8-94)||(40316861-40316947)
chr5 (8-94)||(41410594-41410680)
chr5 (19-94)||(20502994-20503069)
chr5 (19-94)||(30788248-30788323)
chr5 (8-94)||(9936823-9936909)
chr5 (8-94)||(14607492-14607578)
chr5 (20-94)||(40080024-40080098)
chr5 (13-94)||(2551567-2551648)
chr5 (7-94)||(2799674-2799762)
chr5 (19-94)||(27674260-27674335)
chr5 (8-94)||(1831394-1831480)
chr5 (8-78)||(27477673-27477743)
chr5 (8-78)||(34169888-34169958)
chr5 (8-94)||(41042772-41042858)
chr5 (8-94)||(967235-967323)
chr5 (27-72)||(5985004-5985049)
chr5 (7-94)||(2805840-2805928)
chr5 (27-94)||(27675583-27675650)
chr5 (27-78)||(28142987-28143038)
chr5 (27-94)||(32473976-32474043)
chr5 (8-94)||(39925246-39925333)
chr5 (8-94)||(6734824-6734910)
chr5 (8-94)||(10465230-10465316)
chr5 (27-77)||(25946190-25946240)
chr5 (14-68)||(39104220-39104274)
chr5 (38-94)||(8627178-8627234)
chr5 (8-78)||(1918765-1918835)
chr5 (8-78)||(2864086-2864156)
chr5 (44-94)||(32110643-32110693)
chr5 (28-78)||(35641828-35641878)
chr5 (19-68)||(4152256-4152305)
chr5 (22-94)||(39035603-39035675)
[»] chr8 (57 HSPs)
chr8 (8-139)||(29708559-29708690)
chr8 (8-132)||(32909060-32909184)
chr8 (8-133)||(14511844-14511969)
chr8 (8-138)||(42150082-42150212)
chr8 (8-94)||(30464475-30464561)
chr8 (14-94)||(25691535-25691615)
chr8 (8-93)||(43184711-43184796)
chr8 (8-72)||(38036790-38036854)
chr8 (7-94)||(4960194-4960281)
chr8 (27-94)||(20671299-20671366)
chr8 (7-94)||(36632124-36632211)
chr8 (19-94)||(38842206-38842281)
chr8 (7-89)||(1645337-1645419)
chr8 (8-94)||(5777486-5777572)
chr8 (8-94)||(8496818-8496904)
chr8 (8-94)||(21132860-21132946)
chr8 (8-94)||(23437745-23437831)
chr8 (8-94)||(25009187-25009273)
chr8 (8-94)||(11756819-11756907)
chr8 (13-94)||(14378623-14378704)
chr8 (8-92)||(25118831-25118915)
chr8 (14-94)||(30653403-30653483)
chr8 (14-94)||(44887653-44887733)
chr8 (19-78)||(13888573-13888632)
chr8 (27-94)||(29917879-29917946)
chr8 (8-94)||(3466326-3466412)
chr8 (8-94)||(4327051-4327137)
chr8 (8-68)||(27301931-27301991)
chr8 (27-94)||(37094175-37094242)
chr8 (8-94)||(761593-761679)
chr8 (16-78)||(9615582-9615644)
chr8 (8-94)||(15870218-15870304)
chr8 (8-94)||(18419041-18419127)
chr8 (8-94)||(23547111-23547197)
chr8 (14-68)||(44039894-44039948)
chr8 (13-94)||(29616263-29616344)
chr8 (8-92)||(17523850-17523934)
chr8 (38-94)||(40645652-40645708)
chr8 (7-59)||(44871409-44871461)
chr8 (8-67)||(7431251-7431310)
chr8 (27-94)||(43049220-43049287)
chr8 (8-94)||(28583235-28583321)
chr8 (27-72)||(7603372-7603417)
chr8 (13-94)||(40035330-40035411)
chr8 (8-68)||(42786030-42786090)
chr8 (19-94)||(2026615-2026690)
chr8 (8-55)||(21133003-21133050)
chr8 (22-68)||(8058970-8059016)
chr8 (14-56)||(8123719-8123761)
chr8 (102-140)||(38036869-38036907)
chr8 (8-78)||(44361980-44362050)
chr8 (27-68)||(26627971-26628012)
chr8 (27-68)||(35584125-35584166)
chr8 (19-68)||(44947086-44947135)
chr8 (28-68)||(9459244-9459284)
chr8 (38-78)||(10535957-10535997)
chr8 (19-59)||(16345255-16345295)
[»] scaffold0172 (1 HSPs)
scaffold0172 (8-138)||(19670-19800)
[»] chr6 (33 HSPs)
chr6 (8-141)||(2912893-2913026)
chr6 (8-94)||(24825208-24825294)
chr6 (8-94)||(30699304-30699390)
chr6 (13-94)||(24798490-24798571)
chr6 (14-94)||(16661547-16661627)
chr6 (8-94)||(2141611-2141697)
chr6 (8-94)||(2397813-2397899)
chr6 (8-94)||(2656609-2656695)
chr6 (8-94)||(6142446-6142532)
chr6 (8-94)||(29514965-29515051)
chr6 (8-94)||(32541416-32541502)
chr6 (13-94)||(4890070-4890151)
chr6 (8-94)||(2667264-2667350)
chr6 (8-94)||(6188595-6188681)
chr6 (8-94)||(9022883-9022969)
chr6 (8-94)||(10105854-10105940)
chr6 (13-94)||(31708936-31709017)
chr6 (8-94)||(995606-995692)
chr6 (32-94)||(17496281-17496343)
chr6 (8-94)||(28483081-28483166)
chr6 (8-94)||(29795494-29795579)
chr6 (19-94)||(10109361-10109436)
chr6 (8-94)||(16969421-16969507)
chr6 (8-94)||(32673791-32673877)
chr6 (8-92)||(19788623-19788707)
chr6 (8-68)||(24693207-24693267)
chr6 (27-94)||(17417672-17417739)
chr6 (14-72)||(16120819-16120877)
chr6 (28-78)||(16434602-16434652)
chr6 (8-65)||(17179337-17179394)
chr6 (33-94)||(35117323-35117384)
chr6 (28-68)||(12869373-12869413)
chr6 (102-139)||(1870532-1870569)
[»] chr4 (50 HSPs)
chr4 (31-139)||(17492667-17492775)
chr4 (8-94)||(13848917-13849003)
chr4 (8-137)||(2806105-2806234)
chr4 (8-139)||(1615537-1615668)
chr4 (8-138)||(11260710-11260831)
chr4 (8-94)||(24505554-24505640)
chr4 (8-141)||(48079982-48080115)
chr4 (8-94)||(1613152-1613238)
chr4 (8-94)||(10384891-10384977)
chr4 (8-94)||(31152704-31152790)
chr4 (8-94)||(43447208-43447294)
chr4 (8-94)||(28914411-28914497)
chr4 (8-94)||(43047430-43047516)
chr4 (8-94)||(46608256-46608342)
chr4 (7-87)||(53987713-53987793)
chr4 (19-94)||(37164059-37164134)
chr4 (8-94)||(3708296-3708382)
chr4 (8-94)||(8525350-8525436)
chr4 (8-94)||(33394120-33394206)
chr4 (8-94)||(39171001-39171087)
chr4 (8-94)||(55631809-55631895)
chr4 (13-94)||(4271953-4272034)
chr4 (7-94)||(40411541-40411629)
chr4 (22-94)||(47834092-47834164)
chr4 (7-94)||(37667707-37667794)
chr4 (13-94)||(50684963-50685044)
chr4 (14-94)||(39260395-39260475)
chr4 (8-94)||(1981315-1981402)
chr4 (27-94)||(31657309-31657376)
chr4 (8-94)||(28909774-28909860)
chr4 (8-94)||(39332764-39332850)
chr4 (28-94)||(42185317-42185383)
chr4 (38-92)||(48380518-48380572)
chr4 (8-68)||(18881291-18881351)
chr4 (8-92)||(39195535-39195619)
chr4 (27-94)||(6520478-6520545)
chr4 (13-72)||(38715626-38715684)
chr4 (8-94)||(23605836-23605922)
chr4 (8-94)||(29821093-29821179)
chr4 (13-78)||(14958136-14958201)
chr4 (38-94)||(1377546-1377602)
chr4 (8-72)||(48336613-48336677)
chr4 (27-78)||(29844277-29844328)
chr4 (23-57)||(6234858-6234892)
chr4 (8-94)||(28899005-28899091)
chr4 (28-78)||(44210208-44210258)
chr4 (19-68)||(1348727-1348776)
chr4 (27-68)||(36662652-36662693)
chr4 (38-94)||(48336394-48336448)
chr4 (8-68)||(54802992-54803052)
[»] chr7 (48 HSPs)
chr7 (8-138)||(41844767-41844898)
chr7 (8-138)||(29247626-29247756)
chr7 (19-94)||(48448561-48448636)
chr7 (8-94)||(9173271-9173357)
chr7 (8-94)||(16807081-16807167)
chr7 (8-94)||(31496580-31496666)
chr7 (8-94)||(38069094-38069180)
chr7 (14-94)||(38850745-38850825)
chr7 (14-94)||(33376818-33376898)
chr7 (7-94)||(30462155-30462242)
chr7 (8-94)||(25273952-25274038)
chr7 (8-94)||(35693765-35693851)
chr7 (13-94)||(47713372-47713453)
chr7 (14-94)||(37100967-37101047)
chr7 (27-94)||(28016158-28016225)
chr7 (8-94)||(3124081-3124167)
chr7 (8-94)||(40231971-40232057)
chr7 (14-78)||(26651150-26651214)
chr7 (8-68)||(35265756-35265816)
chr7 (8-68)||(38353533-38353593)
chr7 (14-94)||(41007897-41007977)
chr7 (7-78)||(4088770-4088841)
chr7 (27-94)||(32222593-32222660)
chr7 (13-70)||(26190305-26190362)
chr7 (8-94)||(46242413-46242501)
chr7 (8-68)||(38198613-38198673)
chr7 (30-94)||(38441856-38441920)
chr7 (7-94)||(40818631-40818718)
chr7 (28-78)||(23348415-23348465)
chr7 (32-90)||(42493564-42493622)
chr7 (8-69)||(7460991-7461052)
chr7 (27-68)||(40348558-40348599)
chr7 (27-91)||(4033439-4033503)
chr7 (8-68)||(5842186-5842246)
chr7 (38-90)||(7314310-7314362)
chr7 (13-69)||(36404866-36404922)
chr7 (8-68)||(38498749-38498809)
chr7 (27-94)||(4620110-4620176)
chr7 (8-68)||(14201509-14201571)
chr7 (14-69)||(47080685-47080740)
chr7 (27-68)||(23734239-23734280)
chr7 (8-57)||(27621230-27621279)
chr7 (8-57)||(36819956-36820005)
chr7 (11-68)||(40089609-40089666)
chr7 (14-94)||(9136603-9136683)
chr7 (38-94)||(18756642-18756698)
chr7 (27-78)||(29255303-29255352)
chr7 (7-59)||(46074432-46074484)
[»] scaffold0195 (1 HSPs)
scaffold0195 (14-138)||(186-310)
[»] chr2 (45 HSPs)
chr2 (8-140)||(9273351-9273482)
chr2 (8-94)||(1749106-1749192)
chr2 (8-134)||(7601331-7601457)
chr2 (8-94)||(12209032-12209118)
chr2 (19-84)||(20917872-20917937)
chr2 (8-94)||(7724545-7724631)
chr2 (8-94)||(8373477-8373563)
chr2 (8-94)||(38963838-38963924)
chr2 (8-94)||(41436875-41436961)
chr2 (19-94)||(16126027-16126102)
chr2 (8-94)||(8896314-8896400)
chr2 (8-94)||(10333512-10333598)
chr2 (19-94)||(16127725-16127800)
chr2 (19-94)||(16333523-16333598)
chr2 (8-94)||(31603350-31603436)
chr2 (14-94)||(2831750-2831830)
chr2 (8-94)||(45036406-45036492)
chr2 (8-68)||(4137478-4137538)
chr2 (8-84)||(15177422-15177498)
chr2 (14-94)||(18504515-18504595)
chr2 (14-94)||(43328741-43328821)
chr2 (8-94)||(5096291-5096377)
chr2 (8-94)||(6730037-6730123)
chr2 (8-70)||(15771016-15771078)
chr2 (8-94)||(22718477-22718563)
chr2 (8-94)||(40471779-40471865)
chr2 (8-94)||(41575605-41575691)
chr2 (19-90)||(5861510-5861581)
chr2 (7-94)||(44022311-44022398)
chr2 (8-94)||(6075168-6075254)
chr2 (8-94)||(37316919-37317005)
chr2 (8-94)||(37987870-37987956)
chr2 (8-77)||(13399165-13399234)
chr2 (29-78)||(32776160-32776209)
chr2 (27-76)||(37806843-37806892)
chr2 (8-68)||(25762263-25762323)
chr2 (8-56)||(41319858-41319906)
chr2 (27-70)||(5030351-5030394)
chr2 (13-68)||(11383984-11384039)
chr2 (27-94)||(16646289-16646356)
chr2 (27-70)||(25277886-25277929)
chr2 (23-57)||(21271787-21271821)
chr2 (8-57)||(25766524-25766573)
chr2 (8-68)||(33046169-33046230)
chr2 (8-68)||(30708860-30708920)
[»] chr1 (48 HSPs)
chr1 (8-138)||(5117373-5117503)
chr1 (8-138)||(44963611-44963741)
chr1 (7-94)||(26476947-26477034)
chr1 (8-94)||(5606330-5606416)
chr1 (8-94)||(10100452-10100538)
chr1 (10-94)||(26543911-26543995)
chr1 (8-94)||(6017388-6017474)
chr1 (8-94)||(7075269-7075355)
chr1 (8-94)||(10124152-10124238)
chr1 (8-94)||(45299361-45299447)
chr1 (19-94)||(1821578-1821653)
chr1 (8-94)||(5945808-5945894)
chr1 (8-94)||(44741386-44741472)
chr1 (8-94)||(52749324-52749410)
chr1 (8-94)||(40058906-40058994)
chr1 (8-94)||(52688572-52688660)
chr1 (14-94)||(43453110-43453190)
chr1 (14-94)||(44452238-44452318)
chr1 (14-94)||(49903630-49903710)
chr1 (8-94)||(50014500-50014586)
chr1 (13-86)||(2138973-2139046)
chr1 (13-94)||(38786890-38786971)
chr1 (27-91)||(23337853-23337917)
chr1 (27-94)||(40883454-40883521)
chr1 (27-94)||(41855679-41855746)
chr1 (27-94)||(44240562-44240629)
chr1 (27-94)||(48389109-48389176)
chr1 (8-94)||(8048687-8048773)
chr1 (14-68)||(31651846-31651900)
chr1 (8-94)||(31932117-31932203)
chr1 (8-94)||(36035729-36035815)
chr1 (8-94)||(41414246-41414332)
chr1 (8-70)||(48312095-48312157)
chr1 (8-68)||(4489130-4489190)
chr1 (27-90)||(27990762-27990825)
chr1 (27-94)||(47912324-47912391)
chr1 (8-78)||(23393291-23393361)
chr1 (8-68)||(50295875-50295935)
chr1 (28-78)||(30005766-30005816)
chr1 (27-69)||(32968181-32968223)
chr1 (23-57)||(43590912-43590946)
chr1 (27-68)||(3555273-3555314)
chr1 (31-68)||(32495199-32495236)
chr1 (13-94)||(33526106-33526187)
chr1 (7-56)||(51924908-51924957)
chr1 (8-92)||(23391391-23391475)
chr1 (8-68)||(31971456-31971516)
chr1 (38-94)||(33730163-33730219)
[»] chr3 (68 HSPs)
chr3 (8-133)||(9997810-9997934)
chr3 (8-94)||(10232415-10232501)
chr3 (13-94)||(44821464-44821545)
chr3 (8-139)||(10228659-10228789)
chr3 (8-94)||(12250348-12250432)
chr3 (8-94)||(9484639-9484725)
chr3 (8-94)||(12948083-12948169)
chr3 (8-94)||(20144852-20144938)
chr3 (8-94)||(29455638-29455724)
chr3 (8-94)||(29793308-29793394)
chr3 (8-94)||(32961289-32961375)
chr3 (8-94)||(34263634-34263720)
chr3 (8-94)||(49076356-49076442)
chr3 (13-94)||(42098562-42098643)
chr3 (8-142)||(53019824-53019957)
chr3 (8-92)||(34555196-34555280)
chr3 (7-94)||(48927731-48927818)
chr3 (8-94)||(901018-901104)
chr3 (8-94)||(4945781-4945867)
chr3 (8-94)||(34669651-34669737)
chr3 (19-94)||(50673720-50673795)
chr3 (8-94)||(16434787-16434873)
chr3 (8-94)||(26759522-26759608)
chr3 (8-94)||(29720438-29720524)
chr3 (8-94)||(52094024-52094110)
chr3 (13-94)||(28958934-28959015)
chr3 (14-94)||(53055561-53055641)
chr3 (8-94)||(36179066-36179152)
chr3 (8-94)||(47340014-47340100)
chr3 (13-94)||(53274930-53275011)
chr3 (27-87)||(23631541-23631601)
chr3 (38-94)||(38833925-38833981)
chr3 (19-94)||(18013411-18013486)
chr3 (27-94)||(36364712-36364779)
chr3 (8-94)||(1778404-1778490)
chr3 (8-94)||(2643199-2643285)
chr3 (8-94)||(4229118-4229204)
chr3 (40-94)||(10107614-10107668)
chr3 (28-94)||(33462748-33462814)
chr3 (8-94)||(43370334-43370420)
chr3 (8-94)||(46866386-46866472)
chr3 (8-94)||(49818800-49818886)
chr3 (15-72)||(54684605-54684662)
chr3 (14-94)||(1334231-1334311)
chr3 (8-68)||(48690185-48690245)
chr3 (8-59)||(14750991-14751042)
chr3 (9-59)||(8440545-8440595)
chr3 (8-78)||(34680240-34680310)
chr3 (20-69)||(10819385-10819434)
chr3 (14-66)||(35322337-35322389)
chr3 (22-94)||(43394502-43394574)
chr3 (38-94)||(47069449-47069505)
chr3 (38-94)||(50035113-50035169)
chr3 (27-78)||(3086292-3086343)
chr3 (8-78)||(5030048-5030119)
chr3 (7-94)||(29809388-29809475)
chr3 (27-94)||(38878427-38878494)
chr3 (23-57)||(46763955-46763989)
chr3 (29-94)||(1325498-1325563)
chr3 (8-57)||(3817803-3817852)
chr3 (8-45)||(10106314-10106351)
chr3 (29-90)||(21489965-21490026)
chr3 (14-94)||(36594354-36594435)
chr3 (27-72)||(37166547-37166592)
chr3 (27-59)||(8437191-8437223)
chr3 (8-68)||(39099032-39099092)
chr3 (28-68)||(50888414-50888454)
chr3 (8-68)||(54673910-54673970)
[»] scaffold0221 (1 HSPs)
scaffold0221 (8-94)||(5419-5505)
[»] scaffold0001 (1 HSPs)
scaffold0001 (8-94)||(184009-184095)
[»] scaffold0500 (1 HSPs)
scaffold0500 (14-94)||(616-696)
[»] scaffold0069 (1 HSPs)
scaffold0069 (24-94)||(4484-4554)
[»] scaffold1248 (1 HSPs)
scaffold1248 (19-94)||(1402-1477)
[»] scaffold0952 (1 HSPs)
scaffold0952 (19-94)||(836-911)
[»] scaffold0281 (1 HSPs)
scaffold0281 (27-94)||(13147-13214)
[»] scaffold0687 (1 HSPs)
scaffold0687 (27-72)||(1054-1099)
[»] scaffold0204 (2 HSPs)
scaffold0204 (8-72)||(24135-24199)
scaffold0204 (38-94)||(23916-23970)
[»] scaffold0289 (1 HSPs)
scaffold0289 (14-65)||(9196-9247)
[»] scaffold0283 (1 HSPs)
scaffold0283 (19-68)||(3064-3113)
[»] scaffold0018 (1 HSPs)
scaffold0018 (31-68)||(145638-145675)
[»] scaffold0074 (1 HSPs)
scaffold0074 (28-68)||(45196-45236)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 6e-84; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 160 - 383
Target Start/End: Original strand, 20517240 - 20517459
Alignment:
Q  160 taattattacttatttattacccacattactcatgtatacgtaaaattattattcnnnnnnnnnnttatacgtaaaattagtatgggagaagggagtggt 259  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  20517240 taattattacttattcattaccca--ttactcatttatacgtaaaattattattcaaaaaaaat-ttatacgtaaaattagtatgggagaagggagtggt 20517336  T
Q  260 actggtagacaggtgaagaactatacttctaaggtttagggtagatgacaagtggtttttggtatctggtttgagaaagctaaactgaagaaatttagtt 359  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20517337 actggtagacaggtaaagaactatacttctaaggtttagggtagatgacaagtggtttttggtatctggtttgagaaagct-aactgaagaaatttagtt 20517435  T
Q  360 aaagctacaagcttgtcgatatct 383  Q
    ||||||||||||||||||||||||    
T  20517436 aaagctacaagcttgtcgatatct 20517459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 41410881 - 41411010
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||||||    
T  41410881 gagacgaatctaacgacatcttatatgatgctatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaaaatt-aaaaaattccaa 41410979  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||||||||||||||||||||||||| ||||    
T  41410980 atggatcaagtattaagggacggagggagta 41411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 1831193 - 1831064
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||       ||||||    
T  1831193 gagacgaatctaacgacatcttatatgatgctatttatctttgtatattagttgaaaaatacggtcaaaatcagttaggtcaaaatt-aaaaaattccaa 1831095  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||||||||||||||||||||||||| ||||    
T  1831094 atggatcaagtattaagggacggagggagta 1831064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 30352006 - 30352139
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||||||    
T  30352006 gagacgaatctaacgatatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaaaattaaaaaaattccaa 30352105  T
Q  108 atggatcaagtattaagggacggaggaagtatta 141  Q
    |||| |||  |||||||||||||||| |||||||    
T  30352106 atgggtcacttattaagggacggagggagtatta 30352139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 40316660 - 40316531
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||       ||||||    
T  40316660 gagacgaatctaacgacatcttatatgatgctatttatctttgtatattagttgaaaaatacggtcaaaatcagttaggtcaaaatt-aaaaaattccaa 40316562  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||||||||||||||||||||||||| ||||    
T  40316561 atggatcaagtattaagggacggagggagta 40316531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 14639650 - 14639780
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||       ||||||    
T  14639650 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagttagttaggtcaaaattaaaaaaattccaa 14639749  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||| ||||||||||||| | ||||| ||||    
T  14639750 atgggtcaagtattaaggcatggagggagta 14639780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 40365822 - 40365958
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgta---tattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnntt 103  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||||||   |||||||||||||||||||| ||||| |||||||||||||||       ||    
T  40365822 tgagacgaatctaacgacatcttatatgatgttatttatctttgtactatattagttgaaaaatacggtcaaagttagttaggtcaaaattaaaaaaatt 40365921  T
Q  104 ccaaatggatcaagtattaagggacggaggaagtatt 140  Q
    |||||||| |||| |||||||||||||||| ||||||    
T  40365922 ccaaatgggtcaaatattaagggacggagggagtatt 40365958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 26802036 - 26802166
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||       ||  ||    
T  26802036 gagacgaatctaacgaaaacttatatgatgttatttatctttgtatattagttgaaaaatatggtcaaagtcatttaggttaaaattaaaaaaatt-taa 26802134  T
Q  108 atggatcaagtattaagggacggaggaagtat 139  Q
    || | |||||||||||||||||||||||||||    
T  26802135 ataggtcaagtattaagggacggaggaagtat 26802166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 26809586 - 26809716
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||       ||  ||    
T  26809586 gagacgaatctaacgaaaacttatatgatgttatttatctttgtatattagttgaaaaatatggtcaaagtcatttaggttaaaattaaaaaaatt-taa 26809684  T
Q  108 atggatcaagtattaagggacggaggaagtat 139  Q
    || | |||||||||||||||||||||||||||    
T  26809685 ataggtcaagtattaagggacggaggaagtat 26809716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 26824613 - 26824743
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||       ||  ||    
T  26824613 gagacgaatctaacgaaaacttatatgatgttatttatctttgtatattagttgaaaaatatggtcaaagtcatttaggttaaaattaaaaaaatt-taa 26824711  T
Q  108 atggatcaagtattaagggacggaggaagtat 139  Q
    || | |||||||||||||||||||||||||||    
T  26824712 ataggtcaagtattaagggacggaggaagtat 26824743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 40797007 - 40797093
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  40797007 gagacgaatctaacgaaatcttatatgatgttatttatctttgtatattagttgaaaaatacgatcaaagttagttaggtcaaaatt 40797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 1098304 - 1098218
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  1098304 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 1098218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 13548342 - 13548256
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  13548342 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 13548256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 20022989 - 20022903
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  20022989 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 20022903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 20040350 - 20040436
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  20040350 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 20040436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 41263064 - 41263150
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  41263064 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 41263150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 19344634 - 19344720
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  19344634 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaatt 19344720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 30211676 - 30211762
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||| ||||||||    
T  30211676 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaatt 30211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 1781091 - 1781166
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  1781091 aacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaacttaggtcaaaatt 1781166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 14057837 - 14057751
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||| | |||||||| | | ||||| |||||||||||||||    
T  14057837 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatatgatcaaagtaagttaggtcaaaatt 14057751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 14633136 - 14633050
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||| ||| |||||||||| ||||||||||||||||||| || |||||||| ||| ||||| |||||||||||||||    
T  14633136 gagacgaatctaactacatcttatatgatattatttatctttgtatatttgtagaaaaatatggtcaaagtaagttaggtcaaaatt 14633050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 30721620 - 30721706
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||| | |||||||| ||| ||| | |||||||||||||||    
T  30721620 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaatt 30721706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 31191112 - 31191198
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||| | |||||||| ||| ||||| | |||||||||||||    
T  31191112 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaatt 31191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 33402526 - 33402612
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||| || |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  33402526 gagacgaatctaacggcatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 33402612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 40316947 - 40316861
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| |||  |||| | |||||||||||||    
T  40316947 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcgaagtaaattaggtcaaaatt 40316861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 41410594 - 41410680
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| |||  |||| | |||||||||||||    
T  41410594 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcgaagtaaattaggtcaaaatt 41410680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 20502994 - 20503069
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| ||||||||||||||||||| || |||||||| |||  |||| |||||||||||||||    
T  20502994 aacgacatcttatatgatattatttatctttgtatattggtagaaaaatatggtctaagtaagttaggtcaaaatt 20503069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 30788323 - 30788248
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||| ||| |||||||||||||||||||||| |||||||| ||| ||||| ||||| |||||||||    
T  30788323 aacgacatcttatacgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaatt 30788248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 9936823 - 9936909
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | | |||| ||||||||    
T  9936823 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataaattagatcaaaatt 9936909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 14607492 - 14607578
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||| |||||||||||||||||| |||||||| ||| ||| | | |||||||||||||    
T  14607492 gagacgaatctaacgacatcttatatgatattacttatctttgtatattagtagaaaaatatggtcaaattaaattaggtcaaaatt 14607578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 40080098 - 40080024
Alignment:
Q  20 acgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||| |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| |||||||| ||||||    
T  40080098 acgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggttaaaatt 40080024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 2551567 - 2551648
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||| ||| ||||||| || |||||||||||| ||||||||| |||||||| ||||||| | |||||||||||||||    
T  2551567 gaatctaacaacatcttatataatattatttatctttatatattagtagaaaaatatggttaaaataagttaggtcaaaatt 2551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 2799762 - 2799674
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt-tgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| | |||||||| ||||||||||||||||||||||   |||||||| || ||||| |||||||||||||||    
T  2799762 tgagacgaatctaacgacatcatatatgatattatttatctttgtatattagtaaaaaaaatacagtcaaagtaagttaggtcaaaatt 2799674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 27674335 - 27674260
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||| || ||||||||| | ||||||| |||  ||||||||    
T  27674335 aacgacatcttatatgatattatttatctttgtatattaattaaaaaatacgatcaaagtcaattaattcaaaatt 27674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 1831480 - 1831394
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||| ||||||||||||||||| |||||||| |||  |||| | ||| |||||||||    
T  1831480 gagacgaatctaacgacatcttatatgatattatatatctttgtatattagtagaaaaatatggtcgaagtaaattatgtcaaaatt 1831394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 27477673 - 27477743
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| |||||||  ||||||||| ||||||||||||||||||||||  ||||||||||| |||||    
T  27477673 gagacgaatccaacgacatattatatgatattatttatctttgtatattagtaaaaaaatacggtcaaagt 27477743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 34169958 - 34169888
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||| |||||||| ||| |||||    
T  34169958 gagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagt 34169888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 41042772 - 41042858
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||  ||||||||||| |||||||| ||| ||||| || ||| ||||||||    
T  41042772 gagacgaatctaacgacatcttatatgatattatttatcaatgtatattagtagaaaaatatggtcaaagtaagctagatcaaaatt 41042858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 967323 - 967235
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgt--tatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |  ||||||| ||||||||||| | ||||||||  |||||||| |||||||||||||||    
T  967323 gagacgaatctaacgacatcttatatgatatattatttatatttgtatattaatagaaaaatatagttaaagtaagttaggtcaaaatt 967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 5985049 - 5985004
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||    
T  5985049 cttatatgatattatttatctttgtatattagtagaaaaatacggt 5985004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 2805928 - 2805840
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt-tgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| | |||||||| ||||||||||||||||||||||   |||||||| || ||||| | |||||||||||||    
T  2805928 tgagacgaatctaacgacatcatatatgatattatttatctttgtatattagtaaaaaaaatacagtcaaagtaaattaggtcaaaatt 2805840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 27675650 - 27675583
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| | | ||||| || ||||||||||||    
T  27675650 cttatatgatattatttatctatgtatattagtagaaaaatatgatcaaagtaagctaggtcaaaatt 27675583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 28143038 - 28142987
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||| |||||    
T  28143038 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagt 28142987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 32473976 - 32474043
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | ||||| || ||||||    
T  32473976 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttatgttaaaatt 32474043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 39925333 - 39925246
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaa-aatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||| | ||| |||| ||| ||||| | || ||||||||||    
T  39925333 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaggtaaaataatatggtcaaagtaaatttggtcaaaatt 39925246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 6734910 - 6734824
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| ||||||||| ||||| || ||| ||| | |||| ||| ||||||    
T  6734910 gagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaattatggtcaaattaagttgggttaaaatt 6734824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 10465230 - 10465316
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||||||| | ||||||||||  |||||||| ||| ||||| || ||||||||||||    
T  10465230 gagacgaatctaacgatatcttatatgatattatttatatatgtatattagcagaaaaatatggtcaaagtaagataggtcaaaatt 10465316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 25946240 - 25946190
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaag 77  Q
    |||||||||| |||||||||||||||||| ||| |||||||| ||||||||    
T  25946240 cttatatgatattatttatctttgtatatcagtagaaaaatatggttaaag 25946190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 39104220 - 39104274
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| | |||||||||| |||||||||||||||||||||| ||||||||    
T  39104220 aatctaacgatatcttatatgatattatttatctttgtatattagtagaaaaata 39104274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 8627234 - 8627178
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||||||||||||||||||  ||||||| ||| ||||| |||||| ||||||||    
T  8627234 ttatttatctttgtatattagtaaaaaaatatggtcaaagtaagttagatcaaaatt 8627178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 1918765 - 1918835
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| || |||| |||||||||| ||||||||||||||||| ||||  ||||||| | |||||||    
T  1918765 gagacgaatctaaagacatcttatatgatattatttatctttgtatactagtaaaaaaatatgattaaagt 1918835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 2864086 - 2864156
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| ||| ||| |||||||||| ||||||||||||||  |||||| |||||||| ||| |||||    
T  2864086 gagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtgaaagt 2864156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 32110643 - 32110693
Alignment:
Q  44 atctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||||||||| |||||||||||| ||||| | |||| ||||||||    
T  32110643 atctttgtatattagtagaaaaatacggtcaaagtaaattagatcaaaatt 32110693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 35641878 - 35641828
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||||| |||||||||||| ||||||||| |||||||| ||| |||||    
T  35641878 ttatatgatattatttatctttatatattagtagaaaaatatggtcaaagt 35641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 4152256 - 4152305
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||| ||||||| || |||||||| ||||||||||||| ||||||||    
T  4152256 aacgacatcttatataatattatttatatttgtatattagtagaaaaata 4152305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 39035675 - 39035603
Alignment:
Q  22 gacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| || |||||||||||||||||||||| ||| |||| | ||||| | | |||| ||||||||    
T  39035675 gacatcttatattatattatttatctttgtatattagtagaataatatgattaaaataaattagatcaaaatt 39035603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 29708690 - 29708559
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||||||    
T  29708690 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaaaattaaaaaaattccaa 29708591  T
Q  108 atggatcaagtattaagggacggaggaagtat 139  Q
    |||| |||  |||||||||||||||| |||||    
T  29708590 atgggtcacttattaagggacggagggagtat 29708559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 32909184 - 32909060
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||       ||| ||    
T  32909184 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagttaattaggtcaaaattaaaaatattctaa 32909085  T
Q  108 atggatcaagtattaagggacggag 132  Q
    |||| ||||||||||||||||||||    
T  32909084 atgggtcaagtattaagggacggag 32909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 14511969 - 14511844
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||       || |||    
T  14511969 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaaattagttaggtcaaaattaaaaaaatttcaa 14511870  T
Q  108 atggatcaagtattaagggacggagg 133  Q
    ||| ||||| || |||||||||||||    
T  14511869 atgaatcaaatagtaagggacggagg 14511844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 42150082 - 42150212
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| || ||||||       ||| ||    
T  42150082 gagacgaatctaacgacatcttatatgatgttatttatctttttatattagttgaaaaatacggtcaaagtcagttaagttaaaattaaaaaaattctaa 42150181  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    || |||||  |||||||||||||||| ||||    
T  42150182 attgatcacttattaagggacggagggagta 42150212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 30464561 - 30464475
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  30464561 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 30464475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 25691535 - 25691615
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  25691535 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 25691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 43184711 - 43184796
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaat 93  Q
    |||| ||||| ||||||| |||||||||| |||||||| ||||||||||||| |||||||| ||| ||||| ||||||||||||||    
T  43184711 gagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaat 43184796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 38036790 - 38036854
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    |||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38036790 gagacgaatctaacaacatcttatatgatgttatttatctttgtatattagttgaaaaatacggt 38036854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 4960281 - 4960194
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  4960281 tgagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 4960194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 20671366 - 20671299
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  20671366 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 20671299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 36632124 - 36632211
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||| |||| |||||||||||||||||| |||||||||||| ||||||||| |||||||| ||| ||| | |||||| ||||||||    
T  36632124 tgagataaatctaacgacaacttatatgatattatttatctttttatattagtagaaaaatatggtcaaaataagttagatcaaaatt 36632211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 38842281 - 38842206
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  38842281 aacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 38842206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 1645337 - 1645419
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtca 89  Q
    ||||| ||||| ||||| | |||||||||| |||||||| ||||||||||||| |||||||||||| ||||| ||||||||||    
T  1645337 tgagacgaatctaacgatatcttatatgatattatttatttttgtatattagtagaaaaatacggtcaaagtaagttaggtca 1645419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5777486 - 5777572
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||| | || ||| ||||||||    
T  5777486 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggttaaaataagatagatcaaaatt 5777572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 8496818 - 8496904
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| ||||||||||||||||||| || |||||||| ||| ||||| |||||||||||||||    
T  8496818 gagacgaatctaacgatatcttatatgatattatttatctttgtatattcgtagaaaaatatggtcaaagtaagttaggtcaaaatt 8496904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 21132860 - 21132946
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||| ||||||||||||||| |||||||| ||| ||||| ||||| |||||||||    
T  21132860 gagacgaatctaacgacatcttatatgatattatttttctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaatt 21132946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 23437745 - 23437831
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||  | |||||||||||||    
T  23437745 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagcaaattaggtcaaaatt 23437831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 25009273 - 25009187
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| || |||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  25009273 gagacgaatctaatgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaatt 25009187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 11756907 - 11756819
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatat--tagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||| |||||||  ||||||||||||| ||| ||||| |||||||||||||||    
T  11756907 gagacgaatctaacgacatcttatatgatattatttatctatgtatatattagttgaaaaatatggtcaaagtaagttaggtcaaaatt 11756819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 14378623 - 14378704
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| |||||||||| |||||||||||| ||||||||| ||||||||  || ||||| |||||||||||||||    
T  14378623 gaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatagtcaaagtaagttaggtcaaaatt 14378704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 25118915 - 25118831
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa 92  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||||| | ||| ||| |  ||||||||||||    
T  25118915 gagatgaatccaacgacatcttatatgatattatttatctttgtatattagtagaaaaagaaggtcaaaatatgttaggtcaaaa 25118831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 30653483 - 30653403
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||| | ||||||    
T  30653483 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagattaaaatt 30653403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 44887653 - 44887733
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | ||| |||||||||||    
T  44887653 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagtcaggtcaaaatt 44887733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 13888573 - 13888632
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  13888573 aacgacatcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagt 13888632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 29917879 - 29917946
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  29917879 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaatt 29917946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 3466412 - 3466326
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| || |||| |||||||||| |||||||||||||||||||||| ||||||||   | ||||| |||||||||||||||    
T  3466412 gagacgaatctaaagacatcttatatgatattatttatctttgtatattagtagaaaaataaaatcaaagtaagttaggtcaaaatt 3466326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 4327051 - 4327137
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| || |||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||| ||||||||    
T  4327051 gagacgaatctaaagacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttagatcaaaatt 4327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 27301991 - 27301931
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  27301991 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 27301931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 37094242 - 37094175
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  37094242 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 37094175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 761679 - 761593
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||| ||| |||||||||| |||||||  ||||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  761679 gagacgaatctaacaacatcttatatgatattatttaaatttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaatt 761593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 9615644 - 9615582
Alignment:
Q  16 tcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||||||||| ||||||| || ||||||||||||||||||||||  ||||||||||| |||||    
T  9615644 tcgaacgacatcttatataatattatttatctttgtatattagtaaaaaaatacggtcaaagt 9615582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 15870304 - 15870218
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||| ||||||||||||| |||||||| | | ||||| | |||| ||||||||    
T  15870304 gagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaatatgatcaaagtaaattagatcaaaatt 15870218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 18419127 - 18419041
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||| ||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  18419127 gagacgaatctaacgatatcttatatgatattatctatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 18419041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 23547197 - 23547111
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||||| || |||||||||||||||||||||| ||||||||   | ||||| |||||| ||||||||    
T  23547197 gagacgaatctaacgacatcttatataatattatttatctttgtatattagtagaaaaatattatcaaagtaagttagatcaaaatt 23547111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 44039948 - 44039894
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  44039948 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 44039894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 29616263 - 29616344
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| || |||| |||||||||| |||||||||||||||||||||| || ||||| | | ||||| |||||| ||||||||    
T  29616263 gaatctaaagacatcttatatgatattatttatctttgtatattagtagacaaatatgatcaaagtaagttagatcaaaatt 29616344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 17523934 - 17523850
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa 92  Q
    |||| ||||| ||||| | |||||||||| |||||||||||||||||||||  |||||||| | | ||||| |||||||| ||||    
T  17523934 gagacgaatcaaacgatatcttatatgatattatttatctttgtatattagcagaaaaatatgatcaaagtaagttaggttaaaa 17523850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 40645708 - 40645652
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  40645708 ttatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 40645652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 44871461 - 44871409
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt 59  Q
    ||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  44871461 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagt 44871409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 7431251 - 7431310
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaat 67  Q
    |||| ||||| ||| ||| |||||||||| |||||||||||||||||||||| |||||||    
T  7431251 gagacgaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaat 7431310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 43049220 - 43049287
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||| ||||||||    
T  43049220 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagttagctagatcaaaatt 43049287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 28583235 - 28583321
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||||| || |||||||  |||||||||||| | |||||| |||||||| | | ||||| | |||||||||||||    
T  28583235 gagatgaatctaacgacatctcatatgatactatttatctttgaacattagtagaaaaatatgctcaaagtaaattaggtcaaaatt 28583321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 7603417 - 7603372
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||    
T  7603417 cttatatgatattatttatctttgtatattagtataaaaatacggt 7603372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 40035411 - 40035330
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| | |||||||||| |||||||| ||||||||||||| |||||||| | ||||| | | |||| ||||||||    
T  40035411 gaatctaacgatatcttatatgatattatttatttttgtatattagtagaaaaatatgattaaactaaattagatcaaaatt 40035330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 42786030 - 42786090
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| |||||||||| |||||||||||||||||||| | ||||||||    
T  42786030 gagacgaatccaacaacatcttatatgatattatttatctttgtatattaatagaaaaata 42786090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 2026690 - 2026615
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| ||||||| || ||||||||||||||||||||||  || || |  || ||||| |||||||||||||||    
T  2026690 aacgacatcttatataatattatttatctttgtatattagtaaaacaacatagtcaaagtaagttaggtcaaaatt 2026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 21133003 - 21133050
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatat 55  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||    
T  21133003 gagacgaatctaacgacatcttatatgatattatttatctttgtatat 21133050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 8058970 - 8059016
Alignment:
Q  22 gacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| |||||||||| ||||||||||||||||||||||  |||||||    
T  8058970 gacatcttatatgatattatttatctttgtatattagtaaaaaaata 8059016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 8123761 - 8123719
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatatt 56  Q
    |||| ||||||| |||||||||| |||||||||||||||||||    
T  8123761 aatctaacgacatcttatatgatattatttatctttgtatatt 8123719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 38036869 - 38036907
Alignment:
Q  102 ttccaaatggatcaagtattaagggacggaggaagtatt 140  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  38036869 ttccaaatgggtcaagtattaagggacggagggagtatt 38036907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 44362050 - 44361980
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| ||||||  |||||||||| |||||||||| ||||||||||| |||| ||| ||| |||||    
T  44362050 gagacgaatctaacgacgtcttatatgatattatttatctatgtatattagtagaaatatatggtcaaagt 44361980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 26628012 - 26627971
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||||||| |||||||||||||||||||| | ||||||||    
T  26628012 cttatatgatattatttatctttgtatattaatagaaaaata 26627971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 35584125 - 35584166
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||||||| |||||||||||||||||||| | ||||||||    
T  35584125 cttatatgatattatttatctttgtatattaatagaaaaata 35584166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 44947135 - 44947086
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||| |||||||||| ||||||||||| |||||||| | ||||||||    
T  44947135 aacgacatcttatatgatattatttatcttagtatattaatagaaaaata 44947086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 9459244 - 9459284
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||||| |||||||||||| ||||||||| ||||||||    
T  9459244 ttatatgatattatttatctttatatattagtagaaaaata 9459284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 10535997 - 10535957
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||||||||||||||||||  |||||||| ||||||||    
T  10535997 ttatttatctttgtatattagtataaaaatacagttaaagt 10535957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 16345295 - 16345255
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagt 59  Q
    ||||||| |||||||||| |||||||||||| |||||||||    
T  16345295 aacgacatcttatatgatattatttatctttatatattagt 16345255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 19670 - 19800
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||       ||||||    
T  19670 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatactgtcaaagtcaattaggtcaaaattaaaaatattccaa 19769  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||||||| ||||||||||||||||| ||||    
T  19770 atggatcaggtattaagggacggagggagta 19800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 2913026 - 2912893
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||| ||    
T  2913026 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaaaattaaaaaaattctaa 2912927  T
Q  108 atggatcaagtattaagggacggaggaagtatta 141  Q
    |||| |||  |||||||||||||||| |||||||    
T  2912926 atgggtcacttattaagggacggagggagtatta 2912893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 24825294 - 24825208
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  24825294 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 24825208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 30699390 - 30699304
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  30699390 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 30699304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 24798490 - 24798571
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  24798490 gaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 24798571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 16661547 - 16661627
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||    
T  16661547 aatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatacggtcaaagtaagttaggtcaaaatt 16661627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 2141697 - 2141611
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  2141697 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 2141611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 2397899 - 2397813
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  2397899 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaatt 2397813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 2656609 - 2656695
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||  || ||||| |||||||||||||||    
T  2656609 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaatt 2656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 6142446 - 6142532
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  6142446 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 6142532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 29514965 - 29515051
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  29514965 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 29515051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 32541416 - 32541502
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  32541416 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaatt 32541502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 4890070 - 4890151
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  4890070 gaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaatt 4890151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 2667264 - 2667350
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||| ||||||| ||||||||  || ||||| |||||||||||||||    
T  2667264 gagacgaatctaacgacatcttatatgatattatttatctttgtttattagtagaaaaatatagtcaaagtaagttaggtcaaaatt 2667350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 6188595 - 6188681
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||||| |||||||||| |||||||||||| |||||||||  ||||||| | | ||||| |||||||||||||||    
T  6188595 gagatgaatctaacgacatcttatatgatattatttatctttatatattagtaaaaaaatatgctcaaagtaagttaggtcaaaatt 6188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 9022969 - 9022883
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||| ||||||||||||| |||||||| ||| |||||  ||||||||||||||    
T  9022969 gagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaatt 9022883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 10105940 - 10105854
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| ||||||| | ||||| |||||||||    
T  10105940 gagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggttaaaataagttaagtcaaaatt 10105854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 31709017 - 31708936
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| | |||||||||| |||||||||||||||||||||| |||||||||||| ||||| | ||| |||||||||    
T  31709017 gaatctaacgatatcttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtaaattaagtcaaaatt 31708936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 995692 - 995606
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||  || ||||| | || ||||||||||    
T  995692 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaaatttggtcaaaatt 995606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 17496281 - 17496343
Alignment:
Q  32 atgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  17496281 atgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 17496343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 28483166 - 28483081
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||  |||||||| |||||||| ||||||||| |||||| ||||||||    
T  28483166 gagacgaatctaacgacatcttatatgatattatttatcttt-aatattagtagaaaaatatggttaaagtaagttagatcaaaatt 28483081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 29795579 - 29795494
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||  |||||||| |||||||| ||||||||| |||||| ||||||||    
T  29795579 gagacgaatctaacgacatcttatatgatattatttatcttt-aatattagtagaaaaatatggttaaagtaagttagatcaaaatt 29795494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 10109361 - 10109436
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| ||||||| || |||||||| ||||||||||||| ||||||||  || ||||| |||||||||||||||    
T  10109361 aacgacatcttatataatattatttatttttgtatattagtagaaaaataaagtcaaagtaagttaggtcaaaatt 10109436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 16969507 - 16969421
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||||||  ||||||||| |||||||| ||||||||||||| |||||||| ||| ||||| | ||| |||||||||    
T  16969507 gagacgaatctaacgacattttatatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaaattaagtcaaaatt 16969421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 32673877 - 32673791
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||| ||| ||||||||||| |||||||| ||| ||| | |||||| ||||||||    
T  32673877 gagacgaatctaacgacatcttatatgatattatttctctatgtatattagtagaaaaatatggtcaaaataagttagatcaaaatt 32673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 19788707 - 19788623
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa 92  Q
    |||| ||||| ||| ||| |||| ||||| |||||||| ||||||||||||| |||||||| |||||||||  || |||||||||    
T  19788707 gagacgaatccaacaacatcttacatgatattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaaaa 19788623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 24693267 - 24693207
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||||||| ||  ||| |||||||||| |||||||||||||||||||||| ||||||||    
T  24693267 gagatgaatccaaaaacatcttatatgatattatttatctttgtatattagtagaaaaata 24693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 17417672 - 17417739
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||||||||||||| |||||||| | ||||| |  ||| ||||||||||    
T  17417672 cttatatgatattatttatctttgtatattagtagaaaaatatgattaaattatgtttggtcaaaatt 17417739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 16120819 - 16120877
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    |||| |||||||  ||||||||| ||||||||||||||||||||||  |||||||||||    
T  16120819 aatctaacgacattttatatgatattatttatctttgtatattagtaaaaaaatacggt 16120877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 16434652 - 16434602
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||| |||||    
T  16434652 ttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagt 16434602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 17179337 - 17179394
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaa 65  Q
    |||| ||||| ||||||| ||||||| || |||||||||||||||||||||| |||||    
T  17179337 gagacgaatccaacgacatcttatataatattatttatctttgtatattagtagaaaa 17179394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 35117384 - 35117323
Alignment:
Q  33 tgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| |||||||||||||||||||||| |||||||| ||| ||||| ||||| || ||||||    
T  35117384 tgatattatttatctttgtatattagtggaaaaatatggtcaaagtaagttatgttaaaatt 35117323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 12869373 - 12869413
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  12869373 ttatatgatattatttatctttgtatattagtagaaaaata 12869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 1870569 - 1870532
Alignment:
Q  102 ttccaaatggatcaagtattaagggacggaggaagtat 139  Q
    |||||||| | |||||||||||||||||||||||||||    
T  1870569 ttccaaataggtcaagtattaagggacggaggaagtat 1870532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 17492775 - 17492667
Alignment:
Q  31 tatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaaatggatcaagtattaagggacgg 130  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       |||||||||| ||||||||||||||||||    
T  17492775 tatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaaaattaaaaatattccaaatgggtcaagtattaagggacgg 17492676  T
Q  131 aggaagtat 139  Q
    ||| |||||    
T  17492675 agggagtat 17492667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 13849003 - 13848917
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13849003 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggttaaaatcagttaggtcaaaatt 13848917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 2806105 - 2806234
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||       ||| ||    
T  2806105 gagacgaatctaacgacatcttataggatgttatttatctttgtatattagttgaaaaatacggtcaaagttaattagttcaaaattaaaaaaattctaa 2806204  T
Q  108 atggatcaagtattaagggacggaggaagt 137  Q
    |||||||||||||||| |||||||||||||    
T  2806205 atggatcaagtattaaaggacggaggaagt 2806234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 1615668 - 1615537
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||       ||||||    
T  1615668 gagacgaatctaacgacatcttatataatgttatttatctttgtatattagttgaaaaatacggtcaaagtcaattagatcaaaattaaaaaaattccaa 1615569  T
Q  108 atggatcaagtattaagggacggaggaagtat 139  Q
    ||| |||| ||||||||||| ||||| |||||    
T  1615568 atgaatcacgtattaagggatggagggagtat 1615537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 11260831 - 11260710
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||| ||||||         ||||||    
T  11260831 gagacgaatctaacgacatcttatatgatgttatttatctttatatattagttgaaaaatacggtcaaagttagttagatcaaaa---------ttccaa 11260741  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||||||||||||||||||||||||| ||||    
T  11260740 atggatcaagtattaagggacggagggagta 11260710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 24505640 - 24505554
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  24505640 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaaagtcagttaggtcaaaatt 24505554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 48079982 - 48080115
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||| || ||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||       ||| ||    
T  48079982 gagacgaatctaacgacatcttatataatattatttacctttgtatatcagttgaaaaatacggtcaaagtcagttagatcaaaattaaaaaaattctaa 48080081  T
Q  108 atggatcaagtattaagggacggaggaagtatta 141  Q
    |||| ||||||||||||||||| ||| |||||||    
T  48080082 atgggtcaagtattaagggacgaagggagtatta 48080115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 1613152 - 1613238
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  1613152 gagatgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaatt 1613238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 10384977 - 10384891
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||| | |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  10384977 gagacgaatctaacgacatcttatatgttattatttatctttgtatattagtagaaaaatatggttaaagtaagttaggtcaaaatt 10384891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 31152790 - 31152704
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  31152790 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 31152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 43447294 - 43447208
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  43447294 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 43447208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 28914497 - 28914411
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| ||| ||||| |||||||||||||||    
T  28914497 gagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 28914411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 43047516 - 43047430
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||| ||||||    
T  43047516 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggttaaaatt 43047430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 46608342 - 46608256
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||    
T  46608342 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaatt 46608256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 53987713 - 53987793
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggt 87  Q
    ||||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| ||||||||    
T  53987713 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggt 53987793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 37164134 - 37164059
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||||||||  || ||||| |||||||||||||||    
T  37164134 aacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaatt 37164059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 3708382 - 3708296
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||  |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  3708382 gagacgaatctaacgacgtcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 3708296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 8525350 - 8525436
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||| |||||||||||| |||||||| | | ||||| |||||||||||||||    
T  8525350 gagacgaatctaacgacatcttatatgatattatttatccttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 8525436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 33394206 - 33394120
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||  ||||||||||| |||||||||| |||||||| ||| ||||| |||||||||||||||    
T  33394206 gagacgaatctaacgacatcttatatgagattatttatcttcgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 33394120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 39171087 - 39171001
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||||| || |||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  39171087 gagacgaatctaacgacatcttatattatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaatt 39171001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 55631809 - 55631895
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||  ||||||| ||| ||| | |||||||||||||||    
T  55631809 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaatt 55631895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 4271953 - 4272034
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| |||||||||| |||||||||||| ||||||| | ||||||||| || ||||| |||||||||||||||    
T  4271953 gaatcaaacgacatcttatatgatattatttatctttatatattaatagaaaaatacagtcaaagtaagttaggtcaaaatt 4272034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 40411541 - 40411629
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt-tgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||   ||||||| ||| ||||| |||||||||||||||    
T  40411541 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaaatatggtcaaagtaagttaggtcaaaatt 40411629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 47834092 - 47834164
Alignment:
Q  22 gacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| ||||| |||||||||    
T  47834092 gacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaatt 47834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 37667707 - 37667794
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| ||||| |||| |||||||||||||||||||| | |||||||| ||| ||||| | |||||||||||||    
T  37667707 tgagacgaatctaacgacatcttatttgatattatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaatt 37667794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 50685044 - 50684963
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| | | ||||| |||||| ||||||||    
T  50685044 gaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatgatcaaagtaagttagatcaaaatt 50684963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 39260475 - 39260395
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||  || ||| | | |||||||||||||    
T  39260475 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatattgtcaaaataaattaggtcaaaatt 39260395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 1981315 - 1981402
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt-tgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||   ||||||| ||| ||||| |||||| ||||||||    
T  1981315 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaaatatggtcaaagtaagttagatcaaaatt 1981402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 31657309 - 31657376
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  31657309 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 31657376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 28909774 - 28909860
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||  |||||||||| |||||||||||||||| ||||| |||||||| ||| ||||| | ||| |||||||||    
T  28909774 gagacgaatctaacgacgtcttatatgatattatttatctttgtattttagtagaaaaatatggtcaaagtaatttaagtcaaaatt 28909860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 39332764 - 39332850
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||| ||| |||||||||| |||||||  ||||||||||||| |||||||| ||| ||||| |||||| ||||||||    
T  39332764 gagacgaatctaacaacatcttatatgatattatttacttttgtatattagtagaaaaatatggtcaaagtaagttagttcaaaatt 39332850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 42185383 - 42185317
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||| ||| | | |||||||||||||    
T  42185383 ttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaaattaggtcaaaatt 42185317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 48380572 - 48380518
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa 92  Q
    |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||    
T  48380572 ttatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 48380518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 18881291 - 18881351
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| || |||| |||||||||| |||||||||||||||||||||| ||||||||    
T  18881291 gagacgaatctaatgacatcttatatgatattatttatctttgtatattagtagaaaaata 18881351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 39195619 - 39195535
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa 92  Q
    |||| ||||| ||| ||| |||||||||| ||||||||||||||||||||||  ||||||| ||| |||||  || |||||||||    
T  39195619 gagacgaatccaacaacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaaaa 39195535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 6520545 - 6520478
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| ||||||||  || ||||| || ||||||||||||    
T  6520545 cttatatgatattatttatctatgtatattagtagaaaaatatagtcaaagtaagctaggtcaaaatt 6520478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 38715684 - 38715626
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    ||||| ||||||| |||||||||| ||||||||| |||||||||||| ||||||||||||    
T  38715684 gaatccaacgacatcttatatgatattatttatc-ttgtatattagtagaaaaatacggt 38715626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 23605836 - 23605922
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||||||||| ||||| ||||| |||||||| | | ||||| || ||||||||||||    
T  23605836 gagacgaatctaacgatatcttatatgatattatttatctatgtatgttagtagaaaaatatgatcaaagtaagctaggtcaaaatt 23605922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 29821179 - 29821093
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| || |||| || ||||||  ||| |||||||||||||||||| |||||||| ||| ||||| |||||| ||||||||    
T  29821179 gagacgaatctaatgacatctaatatgaaattacttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaatt 29821093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 14958136 - 14958201
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||| ||| ||| |||||||||| |||||||| ||||||||||||| |||||||| ||| |||||    
T  14958136 gaatccaacaacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagt 14958201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 1377602 - 1377546
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  1377602 ttatttatctatgtatattagtagaaaaatatggtcaaagtaagataggtcaaaatt 1377546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 48336613 - 48336677
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    |||| ||||||||||| | ||| ||| || |||| ||||||||||||||||| ||||||||||||    
T  48336613 gagacgaatcgaacgatatcttgtataatattatctatctttgtatattagtagaaaaatacggt 48336677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 29844277 - 29844328
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||| || |||||||||||| ||||||| | ||||||||||||||||||    
T  29844277 cttatataatattatttatctttatatattaatagaaaaatacggttaaagt 29844328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 6234892 - 6234858
Alignment:
Q  23 acaacttatatgatgttatttatctttgtatatta 57  Q
    |||||||||||||| ||||||||||||||||||||    
T  6234892 acaacttatatgatattatttatctttgtatatta 6234858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 28899005 - 28899091
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||   ||||||||| ||||||||||| |||| ||| ||| ||||| |  ||||||||||||    
T  28899005 gagacgaatctaacgacatcttatatgaatatatttatctatgtatattagtagaaatatatggtcaaagtaaactaggtcaaaatt 28899091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 44210258 - 44210208
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||||| |||||||||| ||||||||||| |||||||| ||| |||||    
T  44210258 ttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagt 44210208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 1348727 - 1348776
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||| ||||||| || |||||||| ||||||||||||| ||||||||    
T  1348727 aacgacatcttatataatattatttatatttgtatattagtagaaaaata 1348776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 36662652 - 36662693
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||||||| |||||||||||| ||||||||| ||||||||    
T  36662652 cttatatgatattatttatctttatatattagtagaaaaata 36662693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 48336394 - 48336448
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||||||||  |||||||| |||||||||| | ||||| |||||||||||||||    
T  48336394 ttatttatcttt--atattagtagaaaaatacgatcaaagtaagttaggtcaaaatt 48336448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 54802992 - 54803052
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||| |||| ||| ||| |||||||||| |||||||| ||||||||||| | ||||||||    
T  54802992 gagataaatctaacaacatcttatatgatattatttatttttgtatattaatagaaaaata 54803052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 41844898 - 41844767
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa-ttnnnnnnnttcca 106  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||       |||||    
T  41844898 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttaaaaaatacggtcaaagttagttaggtcaaaatttaaaaaaattcca 41844799  T
Q  107 aatggatcaagtattaagggacggaggaagta 138  Q
    |||| |||||||||||||||||||||||||||    
T  41844798 aatgaatcaagtattaagggacggaggaagta 41844767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 29247756 - 29247626
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||       ||||||    
T  29247756 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagttaaaaaatacggtcaaagtcagttaggtcaaaattaaaaatattccaa 29247657  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||| |||| |||||||||| ||||| ||||    
T  29247656 atgggtcaaatattaagggaaggagggagta 29247626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 48448636 - 48448561
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  48448636 aacgacatcttatatgatattatttatctttgtatattagtggaaaaatatggttaaagtaagttaggtcaaaatt 48448561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 9173271 - 9173357
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  9173271 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 9173357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 16807081 - 16807167
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  16807081 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 16807167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 31496580 - 31496666
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  31496580 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatacggtcaaagtaagttaggtcaaaatt 31496666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 38069180 - 38069094
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  38069180 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 38069094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 38850825 - 38850745
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  38850825 aatctaacgacatcttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagtaagttaggtcaaaatt 38850745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 33376898 - 33376818
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||| ||||||||||||| | |||||||||||| ||||| |||||||||||||||    
T  33376898 aatctaacgacatcttatatgatattatttttctttgtatattaatagaaaaatacggtcaaagtaagttaggtcaaaatt 33376818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 30462155 - 30462242
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| |||||||||| ||||||||||||||||||||||  ||||||| ||| ||||| ||||| |||||||||    
T  30462155 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaaaatt 30462242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 25273952 - 25274038
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||||| || |||||||||||||||||||||| ||||| || ||| ||||| |||||||||||||||    
T  25273952 gagacgaatctaacgacatcttatataatattatttatctttgtatattagtagaaaattatggtcaaagtaagttaggtcaaaatt 25274038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 35693765 - 35693851
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||| ||||||||||||| |||||||| |||  |||| |||||||||||||||    
T  35693765 gagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcgaagtaagttaggtcaaaatt 35693851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 47713372 - 47713453
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| | |||||||||| |||||||||||||||||||||   ||||||||||| ||||| |||||||||||||||    
T  47713372 gaatctaacgatatcttatatgatattatttatctttgtatattagcaaaaaaatacggtcaaagtaagttaggtcaaaatt 47713453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 37100967 - 37101047
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||| ||||||||||||| | |||||||| ||| ||||| |||||||||||||||    
T  37100967 aatctaacgacatcttatatgatattatttttctttgtatattaatagaaaaatatggtcaaagtaagttaggtcaaaatt 37101047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 28016225 - 28016158
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||| ||||||||    
T  28016225 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaatt 28016158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 3124081 - 3124167
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||||||  ||||||||| |||||||| ||||||||||||| ||||||||| || ||||||| |||| ||||||||    
T  3124081 gagacgaatctaacgacattttatatgatattatttatttttgtatattagtagaaaaatacagtcaaagtcaattagatcaaaatt 3124167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 40232057 - 40231971
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| ||| ||| | | |||||||||||||    
T  40232057 gagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaaataaattaggtcaaaatt 40231971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 26651150 - 26651214
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| |||||    
T  26651150 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagt 26651214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 35265756 - 35265816
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  35265756 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 35265816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 38353533 - 38353593
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  38353533 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 38353593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 41007897 - 41007977
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| ||||||||   ||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  41007897 aatctaacgacatcttatatgatattatttattgctgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 41007977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 4088770 - 4088841
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||| ||||| ||||||| |||||||||| |||||||||||||||||||| | ||||||||| || |||||    
T  4088770 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatacagtcaaagt 4088841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 32222660 - 32222593
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||||||||||| | |||||||||| ||||||| | |||| ||||||||    
T  32222660 cttatatgatattatttatctttgtatattaatagaaaaatacgattaaagtaaattagatcaaaatt 32222593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 26190305 - 26190362
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacg 70  Q
    ||||| ||||||| |||||||||  |||||||||||||||||||||| ||||||||||    
T  26190305 gaatccaacgacatcttatatgaaattatttatctttgtatattagtagaaaaatacg 26190362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 46242413 - 46242501
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt--tgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||||||  ||||||||| ||||||||||||||||||||||    ||||||| ||| ||||| |||||||||||||||    
T  46242413 gagacgaatctaacgacattttatatgatattatttatctttgtatattagtaaaaaaaaatatggtcaaagtaagttaggtcaaaatt 46242501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 38198613 - 38198673
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| |||||||||| |||||||||||||||||||||| ||||||||    
T  38198613 gagacgaatccaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 38198673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 38441920 - 38441856
Alignment:
Q  30 atatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| ||||| |||||||||||||||| |||||||| ||| ||||| |||||||| ||||||    
T  38441920 atatgatattattcatctttgtatattagtagaaaaatatggtcaaagtaagttaggtaaaaatt 38441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 40818631 - 40818718
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| ||| ||| |  |||||||||||||||||||||| |||||||| ||| | ||| |||||| ||||||||    
T  40818631 tgagacgaatctaacgacatcttctataagattatttatctttgtatattagtagaaaaatatggtcagagtaagttagatcaaaatt 40818718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 23348465 - 23348415
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||| |||||    
T  23348465 ttatatgatgttatttatctttgtatattagtaaaaaaatatggtcaaagt 23348415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 42493622 - 42493564
Alignment:
Q  32 atgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaa 90  Q
    ||||| |||||||||||||||||||||| |||||||| ||| |||||  ||||||||||    
T  42493622 atgatattatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaa 42493564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 7460991 - 7461052
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatac 69  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| |||||||||  ||||||||    
T  7460991 gagacgaatccaacgacatcttatatgatattatttatctttttatattagtgaaaaaatac 7461052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 40348558 - 40348599
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  40348558 cttatatgatattatttatctttgtatattagtagaaaaata 40348599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 4033439 - 4033503
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaa 91  Q
    ||||||| || ||||||||||||||||||||||  ||||||||||| |||||  || ||||||||    
T  4033439 cttatataatattatttatctttgtatattagtataaaaatacggtcaaagtacgtcaggtcaaa 4033503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 5842246 - 5842186
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| |||||||||  |||||||    
T  5842246 gagacgaatctaacgacatcttatatgatattatttatctttatatattagtataaaaata 5842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 7314310 - 7314362
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaa 90  Q
    |||||||||||||||||||||| |||||||| ||| |||||  ||||||||||    
T  7314310 ttatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaa 7314362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 36404866 - 36404922
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatac 69  Q
    ||||| ||||||| ||||||| || |||||||||||| ||||||||| |||||||||    
T  36404866 gaatctaacgacatcttatataatattatttatctttctatattagtagaaaaatac 36404922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 38498749 - 38498809
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||||||| ||| ||| ||||| |||| |||||||| ||||||||||||| ||||||||    
T  38498749 gagatgaatccaacaacatcttatttgatattatttatttttgtatattagtagaaaaata 38498809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 4620176 - 4620110
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| || ||||||||||||||||||||  | ||||||| ||| ||||| |||||||||||||||    
T  4620176 cttatataatattatttatctttgtatatta-ataaaaaatatggtcaaagtaagttaggtcaaaatt 4620110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 14201509 - 14201571
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgt--tatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| ||||||||||||  ||||||||||||||||||||| ||||||||    
T  14201509 gagacgaatccaacaacatcttatatgatgtattatttatctttgtatattagtagaaaaata 14201571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 47080740 - 47080685
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatac 69  Q
    |||| |||||||  |||||| || |||||||||||||||||||||| |||||||||    
T  47080740 aatccaacgacatattatataatattatttatctttgtatattagtagaaaaatac 47080685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 23734280 - 23734239
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||||||| ||||||||||| |||||||||| ||||||||    
T  23734280 cttatatgatattatttatcttcgtatattagtagaaaaata 23734239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 27621230 - 27621279
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatatta 57  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| |||||||    
T  27621230 gagacgaatctaacgacatcttatatgattttatttatctttatatatta 27621279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 36820005 - 36819956
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatatta 57  Q
    |||| ||||| ||||||| |||||||| | ||||||||||||||||||||    
T  36820005 gagacgaatctaacgacatcttatatggtattatttatctttgtatatta 36819956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 40089666 - 40089609
Alignment:
Q  11 atgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||| |||||||  ||||||||| |||||||| ||||||||||| | ||||||||    
T  40089666 atgaatcaaacgacatattatatgatattatttatatttgtatattaatagaaaaata 40089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 9136603 - 9136683
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||| | |||||||||||||| ||||| | |||||||| ||| ||| | |  ||||||||||||    
T  9136603 aatctaacgacatcttatatgctattatttatctttgtctattaatagaaaaatatggtcaaaataaactaggtcaaaatt 9136683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 18756698 - 18756642
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||||| ||||||||| ||||||||  || ||||| || ||||||||||||    
T  18756698 ttatttatctttatatattagtagaaaaatatagtcaaagtaagataggtcaaaatt 18756642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 29255352 - 29255303
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||||||||| ||||||||||||  |||||||||||||||||  ||||||||    
T  29255352 cttatatgatattatttatcttt--atattagttgaaaaatatagttaaagt 29255303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 46074484 - 46074432
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt 59  Q
    |||| |||||| ||| ||| |||||||||| |||||||||||| |||||||||    
T  46074484 tgaggtgaatccaacaacatcttatatgatattatttatctttatatattagt 46074432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 138
Target Start/End: Original strand, 186 - 310
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaaatggat 113  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||       |||||||||  |    
T  186 aatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaaagccagttaggtcaaaattaaaaatattccaaatgcgt 285  T
Q  114 caagtattaagggacggaggaagta 138  Q
    |||||||||||||||||||| ||||    
T  286 caagtattaagggacggagggagta 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 9273482 - 9273351
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||       ||||||    
T  9273482 gagaagaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaagtcaaaattaaaaaaattccaa 9273383  T
Q  108 atggatcaagtattaagggacggaggaagtatt 140  Q
    |||  |||||| |||||||||||||| ||||||    
T  9273382 atgagtcaagt-ttaagggacggagggagtatt 9273351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 1749106 - 1749192
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1749106 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaaaatt 1749192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 7601331 - 7601457
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||  ||||||||       ||||||    
T  7601331 gagatgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacgatcaaaatcagttaaatcaaaattaaaaaaattccaa 7601430  T
Q  108 atggatcaagtattaagggacggagga 134  Q
    ||| ||| |||||||||||||||||||    
T  7601431 atgaatctagtattaagggacggagga 7601457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 12209118 - 12209032
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  12209118 gagatgaatccaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 12209032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 20917872 - 20917937
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagtta 84  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20917872 aacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagtta 20917937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 7724545 - 7724631
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  7724545 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 7724631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 8373563 - 8373477
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  8373563 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 8373477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 38963924 - 38963838
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  38963924 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 38963838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 41436961 - 41436875
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  41436961 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 41436875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 16126027 - 16126102
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  16126027 aacgacatcttatatgatattatttatctttgtatattagtggaaaaatatggtcaaagtaagttaggtcaaaatt 16126102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 8896400 - 8896314
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||| |||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  8896400 gagacgaatctaacgacatcttatgtgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 8896314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 10333512 - 10333598
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  10333512 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaatt 10333598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 16127725 - 16127800
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  16127725 aacgacatcttatatgatattatttatctttgtatattagtggaaaaatatgatcaaagtaagttaggtcaaaatt 16127800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 16333598 - 16333523
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||| ||| |||||||| ||| ||||| |||||||||||||||    
T  16333598 aacgacatcttatatgatattatttatctttgtatatcagtggaaaaatatggtcaaagtaagttaggtcaaaatt 16333523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 31603350 - 31603436
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||| | |||||||||| |||||||| ||||||||||||| ||||||||  || ||||| |||||||||||||||    
T  31603350 gagatgaatctaacgatatcttatatgatattatttatatttgtatattagtagaaaaatattgtcaaagtaagttaggtcaaaatt 31603436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 2831830 - 2831750
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||| ||||| |||||||| ||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  2831830 aatctaacgacatcttacatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 2831750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 45036492 - 45036406
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| |  || ||||| |||||||||    
T  45036492 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcagcgtaagttaagtcaaaatt 45036406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 4137538 - 4137478
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  4137538 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 4137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 15177498 - 15177422
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagtta 84  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||  ||||||| ||| ||||| |||||    
T  15177498 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagtta 15177422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 18504595 - 18504515
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| ||||| |||||||||||||||| |||||||| ||| ||| | ||||| |||||||||    
T  18504595 aatctaacgacatcttatatgatattattgatctttgtatattagtagaaaaatatggtcaaaataagttacgtcaaaatt 18504515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 43328741 - 43328821
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| | ||||||| || |||||||||||||||||||||| |||||||| ||| ||||| |||||| ||||||||    
T  43328741 aatctaacgatatcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaatt 43328821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 5096377 - 5096291
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| | | ||| | ||||| |||||||||    
T  5096377 gagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatgatcaaaataagttatgtcaaaatt 5096291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 6730037 - 6730123
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||||||||| ||||||||||| |||||||| ||| || || || ||||||||||||    
T  6730037 gagacgaatccaacgatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaatgtaagctaggtcaaaatt 6730123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 15771016 - 15771078
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacg 70  Q
    |||||||||| ||||||| |||||||||| |||||||||||| ||||||| | ||||||||||    
T  15771016 gagatgaatcaaacgacatcttatatgatattatttatctttatatattaatagaaaaatacg 15771078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 22718477 - 22718563
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||||||||| | ||||||||| |||||||| ||| ||||| || ||||||||||||    
T  22718477 gagacgaatctaacgatatcttatatgatattatttatctatatatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 22718563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 40471865 - 40471779
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||  ||||||| | | ||| | ||||| |||||||||    
T  40471865 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaatatgatcaaaataagttaagtcaaaatt 40471779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 41575691 - 41575605
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||| | ||||||||||| |||||||| | | ||||| || ||||||||||||    
T  41575691 gagacgaatctaacgacatcttatatgatattatttatatatgtatattagtagaaaaatatgatcaaagtaagctaggtcaaaatt 41575605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 5861510 - 5861581
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaa 90  Q
    ||||||| |||||||||| |||||||| | ||||||||||| |||||||||||| ||||   ||||||||||    
T  5861510 aacgacatcttatatgatattatttatttgtgtatattagtggaaaaatacggtcaaagcatgttaggtcaa 5861581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 44022398 - 44022311
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| | ||||| ||||||| || ||| |||||||||||||||||| ||||||||  || ||||| |||||||| ||||||    
T  44022398 tgagacgaatctagcgacatcttatataattttaattatctttgtatattagtagaaaaatatagtcaaagtaagttaggttaaaatt 44022311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 6075254 - 6075168
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| | |||||||  |||||||||||||||||||| | |||||||| ||| ||||| |||||  ||||||||    
T  6075254 gagacgaatctaacgacatcgtatatgacattatttatctttgtatattaatagaaaaatatggtcaaagtaagttaaatcaaaatt 6075168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 37317005 - 37316919
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||| |||| ||| ||| ||||| |   |||||||||||    
T  37317005 gagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaatatatggtcaaagtaaaccaggtcaaaatt 37316919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 37987870 - 37987956
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| || |||| |||||||||| ||||||||||||||||||||||  ||||||| | | ||||| | |||| ||||||||    
T  37987870 gagacgaatctaatgacatcttatatgatattatttatctttgtatattagtaaaaaaatatgatcaaagtaacttagatcaaaatt 37987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 13399234 - 13399165
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaag 77  Q
    |||| ||||| ||| ||| |||| ||||| ||||||||||||||| |||||| |||||||| ||||||||    
T  13399234 gagacgaatccaacaacagcttacatgatattatttatctttgtaaattagtagaaaaatatggttaaag 13399165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 32776160 - 32776209
Alignment:
Q  29 tatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||||||| |||||||||||||||||||||| |||||||| || ||||||    
T  32776160 tatatgatattatttatctttgtatattagtagaaaaatatggctaaagt 32776209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 37806892 - 37806843
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaa 76  Q
    ||||||| || |||||||||||||||||||||| |||||||| |||||||    
T  37806892 cttatataatattatttatctttgtatattagtagaaaaatatggttaaa 37806843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 25762323 - 25762263
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| || |||| |||||||||| |||||||||||||||||||| | ||||||||    
T  25762323 gagacgaatccaatgacatcttatatgatattatttatctttgtatattaatagaaaaata 25762263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 41319858 - 41319906
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatatt 56  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||    
T  41319858 gagacgaatctaacgacatcttatatgatattatttatctttgtatatt 41319906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 5030394 - 5030351
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacg 70  Q
    |||||||||| ||||||||||||||||||||||  |||||||||    
T  5030394 cttatatgatattatttatctttgtatattagtataaaaatacg 5030351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 11383984 - 11384039
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||| ||||||| |||| ||||| |||||||||||| ||||||||| ||||||||    
T  11383984 gaatctaacgacatcttacatgatattatttatctttatatattagtagaaaaata 11384039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 16646356 - 16646289
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||| | |||||||||| || |||||||| |||||||| ||| ||||| || ||||||||||||    
T  16646356 cttatatggtattatttatctatgaatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 16646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 25277886 - 25277929
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacg 70  Q
    |||||||||| ||||||||||||||||||||||  |||||||||    
T  25277886 cttatatgatattatttatctttgtatattagtataaaaatacg 25277929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 21271821 - 21271787
Alignment:
Q  23 acaacttatatgatgttatttatctttgtatatta 57  Q
    |||||||||||||| ||||||||||||||||||||    
T  21271821 acaacttatatgatattatttatctttgtatatta 21271787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 25766573 - 25766524
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatatta 57  Q
    |||| ||||| || |||| |||||||||| ||||||||||||||||||||    
T  25766573 gagacgaatccaatgacatcttatatgatattatttatctttgtatatta 25766524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 33046169 - 33046230
Alignment:
Q  8 gagatgaatcgaacgacaacttatatga-tgttatttatctttgtatattagttgaaaaata 68  Q
    ||||| |||| ||||||| ||||||| | | |||||||||||||||||||||| ||||||||    
T  33046169 gagataaatccaacgacatcttatataagtattatttatctttgtatattagtagaaaaata 33046230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30708860 - 30708920
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| |||| ||||| ||||||||||||||| |||||| ||||||||    
T  30708860 gagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaata 30708920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 5117373 - 5117503
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||| ||||||||       || |||    
T  5117373 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaaagtcaattagatcaaaattaaaaaaatttcaa 5117472  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    |||  ||||||||||||||||||||||||||    
T  5117473 atgagtcaagtattaagggacggaggaagta 5117503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 44963611 - 44963741
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||       ||| ||    
T  44963611 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaaatcagttaggtcaaaattaaaaaaattctaa 44963710  T
Q  108 atggatcaagtattaagggacggaggaagta 138  Q
    || | ||||||||||| ||||||||| ||||    
T  44963711 attggtcaagtattaaaggacggagggagta 44963741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 26476947 - 26477034
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  26476947 tgagacgaatctaacgacatcttatatggtgttatttatctttgtatattagttgaaaaatacggtcaaaatcagttatgtcaaaatt 26477034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5606330 - 5606416
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||    
T  5606330 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggttaaagtaagttagatcaaaatt 5606416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 10100452 - 10100538
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  10100452 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 10100538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 26543995 - 26543911
Alignment:
Q  10 gatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||| ||||||| ||||||| || |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  26543995 gatgaatctaacgacatcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 26543911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 6017388 - 6017474
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||| ||||||||    
T  6017388 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaatt 6017474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 7075269 - 7075355
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||| ||||||||    
T  7075269 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaatt 7075355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 10124238 - 10124152
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||||| || |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  10124238 gagacgaatctaacgacatcttatataatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 10124152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 45299447 - 45299361
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||    
T  45299447 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaatt 45299361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 1821578 - 1821653
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||| | |||||||| ||| ||||| |||||||||||||||    
T  1821578 aacgacatcttatatgatattatttatctttgtatattaatggaaaaatatggtcaaagtaagttaggtcaaaatt 1821653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 5945894 - 5945808
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||| | | ||| |||||||||    
T  5945894 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggttaaaataaattatgtcaaaatt 5945808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 44741472 - 44741386
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||| ||||||||    
T  44741472 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttagatcaaaatt 44741386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 52749410 - 52749324
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||||| ||||||    
T  52749410 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtaaaaatt 52749324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 40058906 - 40058994
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttg--tatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||  ||||||||| |||||||||||| ||||| |||||| ||||||||    
T  40058906 gagacgaatctaacgacatcttatatgatattatttatctttgtatatattagtagaaaaatacggtcaaagtaagttagatcaaaatt 40058994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 52688660 - 52688572
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatat--tagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||  |||| ||||||||| || ||||| |||||||||||||||    
T  52688660 gagacgaatctaacgacatcttatatgatattatttatctttgtatattatagtagaaaaatacagtcaaagtaagttaggtcaaaatt 52688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 43453110 - 43453190
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| | |||||||| ||| ||| | |||||||||||||||    
T  43453110 aatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaatt 43453190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 44452318 - 44452238
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| ||||| |||||||||| ||||| |||||||| ||| ||||| |||||||||||||||    
T  44452318 aatctaacgacatcttatatgatattattcatctttgtatgttagtagaaaaatatggtcaaagtaagttaggtcaaaatt 44452238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 49903630 - 49903710
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| | |||||||||||||    
T  49903630 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattaggtcaaaatt 49903710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 50014500 - 50014586
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||| ||||||||    
T  50014500 gagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctagatcaaaatt 50014586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 2138973 - 2139046
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttagg 86  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||    
T  2138973 gaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttagg 2139046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 38786890 - 38786971
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||| ||| |||||||||| ||||||||||||||||||||||||||||||| | | ||||| |||||  ||||||||    
T  38786890 gaatctaacaacatcttatatgatattatttatctttgtatattagttgaaaaatatgatcaaagtaagttatatcaaaatt 38786971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 23337917 - 23337853
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaa 91  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | ||||||||||||    
T  23337917 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaaa 23337853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 40883521 - 40883454
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||||||  ||||||| |||||||||||||||||||||| | | ||||| |||||||||||||||    
T  40883521 cttatatgatactatttatatttgtatattagttgaaaaatatgatcaaagtaagttaggtcaaaatt 40883454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 41855679 - 41855746
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  41855679 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 41855746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 44240629 - 44240562
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  44240629 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 44240562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 48389176 - 48389109
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  48389176 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 48389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 8048687 - 8048773
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||||||||| ||||||||||| |||||||| ||| ||| | || ||||||||||||    
T  8048687 gagacgaatctaacgatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaaataagctaggtcaaaatt 8048773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 31651846 - 31651900
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  31651846 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 31651900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 31932117 - 31932203
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||| || |||||||||| |||||||| ||||||||||||| |||||||| ||| ||||| |  ||||||||||||    
T  31932117 gagacgaatctaacggcatcttatatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaaactaggtcaaaatt 31932203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 36035815 - 36035729
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||||||  ||||||||| |||||||||||||||||||||| |||||||| | | ||||| | |||| ||||||||    
T  36035815 gagacgaatctaacgacattttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattagatcaaaatt 36035729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 41414332 - 41414246
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | | |||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  41414332 gagacgaatctaacgatatcatatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 41414246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 48312157 - 48312095
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacg 70  Q
    |||| ||||| ||||||| ||||||| || |||||||||||||||||||||| ||||||||||    
T  48312157 gagacgaatctaacgacaccttatataatattatttatctttgtatattagtagaaaaatacg 48312095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 4489190 - 4489130
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||| ||||||||    
T  4489190 gagacgaatctaacgacatcttatatgatattatttatctgtgtatattagtagaaaaata 4489130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 27990825 - 27990762
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaa 90  Q
    |||| |||||||||||||| ||||||||||||| |||||||| ||| |||||  ||||||||||    
T  27990825 cttacatgatgttatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaa 27990762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 47912391 - 47912324
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | | ||| |||||||||    
T  47912391 cttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaataaattatgtcaaaatt 47912324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 23393361 - 23393291
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| ||||||| |||||||||| |||||||| |||||||||||||  ||||||| ||| |||||    
T  23393361 gagacgaatctaacgacatcttatatgatattatttatatttgtatattagtataaaaatatggtcaaagt 23393291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 50295875 - 50295935
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| |||||||||| |||||||||||||||||||||  ||||||||    
T  50295875 gagacgaatctaacaacatcttatatgatattatttatctttgtatattagcagaaaaata 50295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 30005766 - 30005816
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    ||||||||| |||||||| ||||||||||||| |||||||| | |||||||    
T  30005766 ttatatgatattatttatttttgtatattagtagaaaaatatgattaaagt 30005816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 32968223 - 32968181
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatac 69  Q
    |||||||||| ||||||||||||||||||||||  ||||||||    
T  32968223 cttatatgatattatttatctttgtatattagtataaaaatac 32968181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 43590946 - 43590912
Alignment:
Q  23 acaacttatatgatgttatttatctttgtatatta 57  Q
    |||||||||||||| ||||||||||||||||||||    
T  43590946 acaacttatatgatattatttatctttgtatatta 43590912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 3555314 - 3555273
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  3555314 cttataagatattatttatctttgtatattagtagaaaaata 3555273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 32495199 - 32495236
Alignment:
Q  31 tatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  32495199 tatgatattatttatctttgtatattagtcgaaaaata 32495236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 33526106 - 33526187
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| || |||| |||||||||  |||||||| ||||||||||||| ||||||||  || ||||| | |||| ||||||||    
T  33526106 gaatctaatgacatcttatatgaaattatttatttttgtatattagtagaaaaatatagtcaaagtaaattagatcaaaatt 33526187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 51924908 - 51924957
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatatt 56  Q
    ||||| ||||| ||| ||| |||||||||| |||||||||||||||||||    
T  51924908 tgagacgaatccaacaacatcttatatgatattatttatctttgtatatt 51924957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 23391391 - 23391475
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa 92  Q
    |||||||||| ||| ||  |||||||||| ||||||||  || |||||||||  ||||||||||| |||||  ||||| ||||||    
T  23391391 gagatgaatccaacaacttcttatatgatattatttattattatatattagtataaaaatacggtcaaagtatgttagatcaaaa 23391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 31971516 - 31971456
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| |||||||||| ||||||||||||||  |||||| ||||||||    
T  31971516 gagacgaatccaacaacatcttatatgatattatttatctttgttaattagtagaaaaata 31971456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 33730163 - 33730219
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||||| ||||||||   ||||||| ||||||||| ||||| |||||||||    
T  33730163 ttatttatctttatatattagcataaaaatatggttaaagtaagttatgtcaaaatt 33730219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 7e-31; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 9997810 - 9997934
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||       ||  ||    
T  9997810 gagacgaatctaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcatttaggttaaaattaaaaaaatt-taa 9997908  T
Q  108 atggatcaagtattaagggacggagg 133  Q
    || |||||||||||||||||||||||    
T  9997909 atagatcaagtattaagggacggagg 9997934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 10232415 - 10232501
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  10232415 gagacgaatctaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcatttaggttaaaatt 10232501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 44821464 - 44821545
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44821464 gaatctaacgacatctcatatgatgttatttatctttgtatattagttgaaaaatacggtcaaagtcagttaggtcaaaatt 44821545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 10228659 - 10228789
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||       ||  ||    
T  10228659 gagacgaatctaacgaaaacttatatgatgttatttatctttgtatattagttgaaaaatatggtcaaagtcatttaggttaaaattaaaaaaatt-taa 10228757  T
Q  108 atggatcaagtattaagggacggaggaagtat 139  Q
    || | |||||||||||||||||||||||||||    
T  10228758 ataggtcaagtattaagggacggaggaagtat 10228789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 12250432 - 12250348
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  12250432 gagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacggt--cagtcagttaggtcaaaatt 12250348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 9484725 - 9484639
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  9484725 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 9484639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 12948169 - 12948083
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  12948169 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 12948083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 20144852 - 20144938
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||| ||||||||    
T  20144852 gagacgaatctaacgacatcttatatgatgttatttatctttatatattagttgaaaaatacggtcaaaatcaattagttcaaaatt 20144938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 29455638 - 29455724
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  29455638 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 29455724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 29793308 - 29793394
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  29793308 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 29793394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 32961375 - 32961289
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  32961375 gagacgaatctaacgacaacttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaaaatt 32961289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 34263634 - 34263720
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  34263634 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 34263720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 49076356 - 49076442
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  49076356 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 49076442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 42098562 - 42098643
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  42098562 gaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 42098643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 53019957 - 53019824
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaattnnnnnnnttccaa 107  Q
    |||| ||||| ||||| | ||||||| |||||||||||||||| |||||||||||||||||| || |||  || |||||||||||||       ||||||    
T  53019957 gagacgaatctaacgatatcttatataatgttatttatctttgcatattagttgaaaaatacagtcaaaaccaattaggtcaaaattaaaaatattccaa 53019858  T
Q  108 atggatcaagtattaagggacggaggaagtattat 142  Q
    |||||| ||||||||||||||||| | ||||||||    
T  53019857 atggat-aagtattaagggacggaaggagtattat 53019824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 34555280 - 34555196
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaa 92  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||    
T  34555280 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaa 34555196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 48927731 - 48927818
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||| ||||||    
T  48927731 tgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtaaaaatt 48927818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 901018 - 901104
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  901018 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 901104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 4945781 - 4945867
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||| | |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  4945781 gagatgaatctaacgatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 4945867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 34669737 - 34669651
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| |||||||||||||||    
T  34669737 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaatt 34669651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 50673795 - 50673720
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| ||||| |||||||||    
T  50673795 aacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaatt 50673720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 16434787 - 16434873
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||  ||||||| ||| ||| | |||||||||||||||    
T  16434787 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaatt 16434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 26759608 - 26759522
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  26759608 gagacgaatctaacgatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 26759522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 29720524 - 29720438
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| | | ||||| |||||||||||||||    
T  29720524 gagacgaatccaacgacatcttatatgatattatttatctttatatattagtggaaaaataggatcaaagtaagttaggtcaaaatt 29720438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 52094024 - 52094110
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||| ||||||||    
T  52094024 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaattaagttagatcaaaatt 52094110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 28958934 - 28959015
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| ||| ||||| || ||||||||||||    
T  28958934 gaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 28959015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 53055561 - 53055641
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||| ||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  53055561 aatctaacgacatcttaaatgatattatttatctttgtatattagtagaaaaatatggtcaaaattagttaggtcaaaatt 53055641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 36179066 - 36179152
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| | ||| |||||||||    
T  36179066 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattaagtcaaaatt 36179152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 47340014 - 47340100
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| ||||||| |||||||||| |||||||||||| ||||||||| |||||||| | | ||||| | |||| ||||||||    
T  47340014 gagatgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatgatcaaagtaaattagatcaaaatt 47340100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 53274930 - 53275011
Alignment:
Q  13 gaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||| ||| |||||||||| |||||||||||||||||||||| |||||||| | | ||| | |||||||||||||||    
T  53274930 gaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaaataagttaggtcaaaatt 53275011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 23631541 - 23631601
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggt 87  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| |||||  |||||||    
T  23631541 cttatatgatattatttatctttgtatattagtagaaaaatacggtcaaagtatgttaggt 23631601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 38833925 - 38833981
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  38833925 ttatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 38833981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 18013411 - 18013486
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| | | ||||| | ||| |||||||||    
T  18013411 aacgacatcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaaattatgtcaaaatt 18013486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 36364712 - 36364779
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  36364712 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaaataagttaggtcaaaatt 36364779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 1778490 - 1778404
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || || |||||||||    
T  1778490 gagacgaatctaacgatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaagtcaaaatt 1778404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 2643199 - 2643285
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| |||| || |||||||||| |||||||| ||||||||||||| |||||||| ||| ||||| |  ||||||||||||    
T  2643199 gagacgaatctaacggcatcttatatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaaactaggtcaaaatt 2643285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 4229118 - 4229204
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||| |||||||||||  ||||||| | | ||||| || ||||||||||||    
T  4229118 gagacgaatctaacgacatcttatatgatattatttatctatgtatattagtaaaaaaatatgatcaaagtaagctaggtcaaaatt 4229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 10107614 - 10107668
Alignment:
Q  40 atttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||| |||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  10107614 atttatatttgtatattagttgaaaaatacggtcaaagtcatttaggttaaaatt 10107668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 33462814 - 33462748
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||||| |||||||||||||||||||||| ||||| ||  |||||||| |||||| ||||||||    
T  33462814 ttatatgatattatttatctttgtatattagtagaaaagtatagttaaagtaagttagatcaaaatt 33462748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 43370420 - 43370334
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| ||||| | || ||||||||||||||||||||||  ||||||||| | ||||| ||||| |||||||||    
T  43370420 gagacgaatctaacgacatcttatgtaatattatttatctttgtatattagtataaaaatacgatcaaagtaagttatgtcaaaatt 43370334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 46866472 - 46866386
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||| ||| |||||||||| |||||||||||||||||||||| ||||||||  |  ||| | |||||||||||||||    
T  46866472 gagacgaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaatattgccaaaataagttaggtcaaaatt 46866386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 49818886 - 49818800
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||| | || ||||||| |||||||||| ||||||||||| |||||||| ||| ||||| | |||||||||||||    
T  49818886 gagacgaatctaacgatatctaatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaatt 49818800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 54684605 - 54684662
Alignment:
Q  15 atcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    ||||||| ||| ||||||| || |||||||||||||||||||||| ||||||||||||    
T  54684605 atcgaacaacatcttatataatattatttatctttgtatattagtagaaaaatacggt 54684662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 1334231 - 1334311
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||  ||||||| ||| ||| | |||||| ||||||||    
T  1334231 aatctaacgacatcttatatgatatcatttatctttgtatattagtaaaaaaatatggtaaaattaagttagatcaaaatt 1334311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 48690185 - 48690245
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| |||||||||| |||||||||||||||||||||| ||||||||    
T  48690185 gagacgaatccaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 48690245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 14750991 - 14751042
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt 59  Q
    |||| ||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  14750991 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagt 14751042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 8440595 - 8440545
Alignment:
Q  9 agatgaatcgaacgacaacttatatgatgttatttatctttgtatattagt 59  Q
    ||||||||| ||| ||| |||||||||| ||||||||||||||||||||||    
T  8440595 agatgaatccaacaacatcttatatgatattatttatctttgtatattagt 8440545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 34680310 - 34680240
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| ||||| | |||||||||| |||||||||| ||||||||||| |||||||| ||| |||||    
T  34680310 gagacgaatctaacgatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagt 34680240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 10819385 - 10819434
Alignment:
Q  20 acgacaacttatatgatgttatttatctttgtatattagttgaaaaatac 69  Q
    |||||| |||||||||| |||||||||| ||||||||||| |||||||||    
T  10819385 acgacatcttatatgatattatttatctgtgtatattagtagaaaaatac 10819434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 35322337 - 35322389
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaa 66  Q
    |||| ||| ||| |||||||||| ||||||||||||||||||||||| |||||    
T  35322337 aatccaacaacatcttatatgatattatttatctttgtatattagttaaaaaa 35322389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 43394502 - 43394574
Alignment:
Q  22 gacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| |||||||||| |||||||||||||| ||||||| |||||||| ||| ||| | |||||| ||| ||||    
T  43394502 gacatcttatatgatattatttatctttgtttattagtagaaaaatatggtcaaaataagttagatcagaatt 43394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 47069505 - 47069449
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||||||||||| ||| ||||||||| || |||||  ||||||||||||||    
T  47069505 ttatttatctttgtatatcagtagaaaaatacagtcaaagtaggttaggtcaaaatt 47069449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 50035169 - 50035113
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||||||||||||||||||  ||||| | ||| ||||| |||||||||||||||    
T  50035169 ttatttatctttgtatattagtataaaaacatggtcaaagtaagttaggtcaaaatt 50035113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 3086292 - 3086343
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||||||||| ||||||||||||||||||||||  ||||||| ||| |||||    
T  3086292 cttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagt 3086343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 5030119 - 5030048
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatg-ttatttatctttgtatattagttgaaaaatacggttaaagt 78  Q
    |||| ||||| ||| ||| ||||||||||  |||||||||||||||||||||| ||||| |||||| |||||    
T  5030119 gagacgaatccaacaacatcttatatgataattatttatctttgtatattagtagaaaagtacggtcaaagt 5030048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 29809475 - 29809388
Alignment:
Q  7 tgagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||| ||||| ||||| | |||||||||  |||||||||||||||||||| | |||||||| |||  |||| || ||| ||||||||    
T  29809475 tgagacgaatctaacgatatcttatatgacattatttatctttgtatattaatagaaaaatatggtcgaagtaagctagatcaaaatt 29809388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 38878427 - 38878494
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||||| ||||||||| |||||||| ||| ||| | | ||| |||||||||    
T  38878427 cttatatgatattatttatctttttatattagtagaaaaatatggtcaaaataatttatgtcaaaatt 38878494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 46763989 - 46763955
Alignment:
Q  23 acaacttatatgatgttatttatctttgtatatta 57  Q
    |||||||||||||| ||||||||||||||||||||    
T  46763989 acaacttatatgatattatttatctttgtatatta 46763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 1325498 - 1325563
Alignment:
Q  29 tatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||| |||||||||||| ||||||||| ||||||||   | ||||| |||||||| ||||||    
T  1325498 tatatgatattatttatctttatatattagtagaaaaatataatcaaagtaagttaggttaaaatt 1325563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 3817852 - 3817803
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatatta 57  Q
    |||| ||||| ||||||| |||||||||| |||||||||||| |||||||    
T  3817852 gagacgaatctaacgacatcttatatgatattatttatctttatatatta 3817803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 10106314 - 10106351
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttat 45  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  10106314 gagacgaatctaacgacaacttatatgatgttatttat 10106351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 21490026 - 21489965
Alignment:
Q  29 tatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaa 90  Q
    ||||| || |||||||||||||||||||| |  ||||||||||| |||||  ||||||||||    
T  21490026 tatatcatattatttatctttgtatattaataaaaaaatacggtcaaagtatgttaggtcaa 21489965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 36594354 - 36594435
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttg-aaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||| ||||||| | | ||||||| | | ||| | |||||||||||||||    
T  36594354 aatctaacgacatcttatatgatattatttatctttatatattaatagaaaaaatatgatcaaaataagttaggtcaaaatt 36594435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 37166592 - 37166547
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    ||||||| || |||||||||||| ||||||||| ||||||||||||    
T  37166592 cttatataatattatttatctttttatattagtggaaaaatacggt 37166547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 8437223 - 8437191
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagt 59  Q
    |||||||||| ||||||||||||||||||||||    
T  8437223 cttatatgatattatttatctttgtatattagt 8437191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 39099092 - 39099032
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| || ||||||| |||||||||||||||||||| | ||||||||    
T  39099092 gagacgaatctaacaacatctaatatgatattatttatctttgtatattaatagaaaaata 39099032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 50888454 - 50888414
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||||| |||||||||||||||||||||  ||||||||    
T  50888454 ttatatgatattatttatctttgtatattagcagaaaaata 50888414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 54673910 - 54673970
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||| ||||| ||| ||| |||||||||| ||||||||||||||  |||||| ||||||||    
T  54673910 gagaagaatccaacaacatcttatatgatattatttatctttgttaattagtagaaaaata 54673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 5505 - 5419
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  5505 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 5419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 184095 - 184009
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||    
T  184095 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaatt 184009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 616 - 696
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||| | |||||||||||||||    
T  616 aatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaaaatt 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 4554 - 4484
Alignment:
Q  24 caacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| || ||||||||||||| |||||||| |||||||||||| ||| | |||||||||||||||    
T  4554 caacttatataatattatttatctttgcatattagtagaaaaatacggtcaaaataagttaggtcaaaatt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 1402 - 1477
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||  ||||||||| |||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||    
T  1402 aacgacatattatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaatt 1477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 911 - 836
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||  ||||||||| |||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||||||||    
T  911 aacgacatattatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaatt 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 13214 - 13147
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| || ||||||||||||    
T  13214 cttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaatt 13147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 1099 - 1054
Alignment:
Q  27 cttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||    
T  1099 cttatatgatattatttatctttgtatattagtataaaaatacggt 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 24135 - 24199
Alignment:
Q  8 gagatgaatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaaatacggt 72  Q
    |||| ||||||||||| | ||| ||| || |||| ||||||||||||||||| ||||||||||||    
T  24135 gagacgaatcgaacgatatcttgtataatattatctatctttgtatattagtagaaaaatacggt 24199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 23916 - 23970
Alignment:
Q  38 ttatttatctttgtatattagttgaaaaatacggttaaagtcagttaggtcaaaatt 94  Q
    ||||||||||||  |||||||| |||||||||| | ||||| |||||||||||||||    
T  23916 ttatttatcttt--atattagtagaaaaatacgatcaaagtaagttaggtcaaaatt 23970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 9247 - 9196
Alignment:
Q  14 aatcgaacgacaacttatatgatgttatttatctttgtatattagttgaaaa 65  Q
    |||| ||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  9247 aatctaacgacatcttatatgatattatttatctttgtatgttagtagaaaa 9196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 3113 - 3064
Alignment:
Q  19 aacgacaacttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||| |||||||||| ||||||||||| |||||||| | ||||||||    
T  3113 aacgacatcttatatgatattatttatcttagtatattaatagaaaaata 3064  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 145675 - 145638
Alignment:
Q  31 tatgatgttatttatctttgtatattagttgaaaaata 68  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  145675 tatgatattatttatctttgtatattagtagaaaaata 145638  T

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Target: scaffold0074 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 45236 - 45196
Alignment:
Q  28 ttatatgatgttatttatctttgtatattagttgaaaaata 68  Q
    ||||||||| |||||||||||||||||| ||| ||||||||    
T  45236 ttatatgatattatttatctttgtatataagtagaaaaata 45196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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