View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18674_high_53 (Length: 350)
Name: NF18674_high_53
Description: NF18674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18674_high_53 |
 |  |
|
| [»] scaffold0454 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr4 (Bit Score: 279; Significance: 1e-156; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 33 - 331
Target Start/End: Original strand, 5613627 - 5613925
Alignment:
| Q |
33 |
ctgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaaaggcaacaaagc |
132 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
5613627 |
ctgataggttctctagttttgaaagggaagaatcaagaggtcctgatagattacagttagacatgctcagttcttgtaggtcgctcaaaggcaacaaagc |
5613726 |
T |
 |
| Q |
133 |
attgatccattcatgtccctgagatgttatacttataccatctagatacagtcgcctcatattgatgagattttggataagcttttgtaaatttgggatt |
232 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5613727 |
attgatccattcatgtccctgagatgttatacttataccatctagatacagttgcctcatattggtgagattttggataagcttttgtaaatttgggatt |
5613826 |
T |
 |
| Q |
233 |
ttaggttttgtgtcgacatcagaagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaattcattatatgac |
331 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5613827 |
ttaggttttgtgtcgacataagaagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaattcattatatgac |
5613925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 14 - 294
Target Start/End: Complemental strand, 5847837 - 5847557
Alignment:
| Q |
14 |
ttctcaccaagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggt |
113 |
Q |
| |
|
||||||||||||| |||||| | |||||||||||| ||| ||||||||| |||| || |||||||||| ||| | ||||||||||| | ||| |||| |
|
|
| T |
5847837 |
ttctcaccaagaacaatgaccgtcaggttctctagtcttgttagggaagaatcaaggggtcctgatagatcacaatcagacatgctcaacttttgcaggt |
5847738 |
T |
 |
| Q |
114 |
cgctcaaaggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacagtcgcctcatattgatgagattttggataag |
213 |
Q |
| |
|
| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||| |
|
|
| T |
5847737 |
cacgcaaaggcaacaaagcattgctccattcatgtccccgagatgttatacttataccatctagatacatttgcctaatattggtgagattttggataaa |
5847638 |
T |
 |
| Q |
214 |
cttttgtaaatttgggattttaggttttgtgtcgacatcagaagagagatcaagagtaaccaacctcgtgagctgggaaat |
294 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
5847637 |
cttttgtagatttgggattttaggttttgtgtcgacataagaagagagatcaagagtaaccaacctcgtgagttgtgaaat |
5847557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 22 - 318
Target Start/End: Complemental strand, 5894889 - 5894590
Alignment:
| Q |
22 |
aagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaaa |
121 |
Q |
| |
|
||||||||||||||| ||||||| |||| |||| ||||||||| |||| | ||||| | || ||| ||||||||||||| |||||||||||| | |||| |
|
|
| T |
5894889 |
aagaataatgactgacaggttctgtagtcttgatagggaagaatcaagggatcctgacaaatcacaattagacatgctcaattcttgtaggtcacgcaaa |
5894790 |
T |
 |
| Q |
122 |
ggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacagtcgcctcatattgatgagattttggataagcttttgta |
221 |
Q |
| |
|
|| | |||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||| |
|
|
| T |
5894789 |
ggtatcaaagcattgctccatttatgtctctgagatgttatagttataccatctagatacagttgcctaatattggtgagattttggataaacttttgta |
5894690 |
T |
 |
| Q |
222 |
aatttgggattttaggttttgtg---tcgacatcagaagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaa |
318 |
Q |
| |
|
|||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||| || || || |||||||| |||||||||||||||||||| |
|
|
| T |
5894689 |
aatttgggatattaggtttcgtgcgaacgacatcaaaagagagatcaagagtaaccaaccttgtaagttgtgaaatctcaattggaatctgccccacaaa |
5894590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 5886058 - 5885824
Alignment:
| Q |
8 |
aaattattctcaccaagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttctt |
107 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||| || ||||||||| |||||||| ||||||||| |||| |
|
|
| T |
5886058 |
aaattgttctcgccaagaataatgaccgataggttctctagttttgaaagggaggaatcaaggggtcctgatagactacagttatacatgctcaactctt |
5885959 |
T |
 |
| Q |
108 |
gtaggtcgctcaaaggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacagtcgcctcatattgatgagattttg |
207 |
Q |
| |
|
| | ||| | || || ||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||| |||||| | |||||||| |
|
|
| T |
5885958 |
gcaagtcacgcagcggtaacaaagcattactccattcatatcccggagatgttatacttataccatctagatacagttgcctaatattggtaagattttg |
5885859 |
T |
 |
| Q |
208 |
gataagcttttgtaaatttgggattttaggttttg |
242 |
Q |
| |
|
|||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
5885858 |
gataagcttttgtagatttgagattttaagttttg |
5885824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 218
Target Start/End: Original strand, 3749448 - 3749658
Alignment:
| Q |
8 |
aaattattctcaccaagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttctt |
107 |
Q |
| |
|
||||| ||| || ||||||||||||||||||||||||||||| ||| ||||||||| |||| || ||||||| || ||||| ||||||||||| ||||| |
|
|
| T |
3749448 |
aaattgttcccatcaagaataatgactgataggttctctagtcttgttagggaagaatcaaggggtcctgataaatcacagtaagacatgctcaattctt |
3749547 |
T |
 |
| Q |
108 |
gtaggtcgctcaaaggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacagtcgcctcatattgatgagattttg |
207 |
Q |
| |
|
| | ||| | ||| ||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||| ||| |||| |||||| |||||||||| |
|
|
| T |
3749548 |
gcaagtcacgcaacggcaacaaagcattgctcaattcatgtcctcgagatgttatacttatcccatctagatatagttgcctaatattggtgagattttg |
3749647 |
T |
 |
| Q |
208 |
gataagctttt |
218 |
Q |
| |
|
|| ||| |||| |
|
|
| T |
3749648 |
gacaagatttt |
3749658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 5858566 - 5858734
Alignment:
| Q |
14 |
ttctcaccaagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggt |
113 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| || ||| ||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
5858566 |
ttctcatcaagaataatgactgataggttctctagttttgttagggaagaatcaaggggacctaatagaccacaggaagacatgctcaattcttgtaggt |
5858665 |
T |
 |
| Q |
114 |
cgctcaaaggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagataca |
182 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||||| || || |||||||| || ||||||||||| |
|
|
| T |
5858666 |
ttcgcaacggcaacaaagcattgatccattcatgtcccttagctgatatacttacactatctagataca |
5858734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 5565296 - 5565468
Alignment:
| Q |
8 |
aaattattctcaccaagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttctt |
107 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||| |||| | ||||||| | ||||| |
|
|
| T |
5565296 |
aaattattgtcaccaagaataatgactgataggttctctagttttgaaagggaagaatcaaggggtcctgaaagaccacagcttgacatgcctaattctt |
5565395 |
T |
 |
| Q |
108 |
gtaggtcgctcaaaggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagata |
180 |
Q |
| |
|
||||||| | || ||||||||| | || ||||||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
5565396 |
gtaggtcacggaacggcaacaaaagactgctccattcatatccttgagatggtatacttataccatctagata |
5565468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 5553718 - 5553923
Alignment:
| Q |
21 |
caagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaa |
120 |
Q |
| |
|
||||||||||||| |||||||| | ||||||||| ||||||||| | || ||||||| ||||| ||||||| ||||||||| |||||||| || | || |
|
|
| T |
5553718 |
caagaataatgaccgataggttttttagttttgatagggaagaatctagtggccctgctagatcacagttatacatgctcaactcttgtagttcacacag |
5553817 |
T |
 |
| Q |
121 |
aggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacagtcgcctcatattgatgagattttggataagcttttgt |
220 |
Q |
| |
|
||||||||||||||| |||||||| |||||| |||||||| | ||||||| |||| ||||||| |||| || ||| | |||||||||| || ||||||| |
|
|
| T |
5553818 |
cggcaacaaagcattgctccattcaggtccctcagatgttagagttataccttctaaatacagttgcctaatcttggtaagattttggacaaacttttgt |
5553917 |
T |
 |
| Q |
221 |
aaattt |
226 |
Q |
| |
|
| |||| |
|
|
| T |
5553918 |
agattt |
5553923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 5852704 - 5852499
Alignment:
| Q |
21 |
caagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaa |
120 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||| |||| ||||||| ||||| ||| ||| ||| ||||| |||||| || | || |
|
|
| T |
5852704 |
caagaataatgactgataggttccttagttttgatagggaagaatcaagtggccctgctagatcacatttatacaagctcaacatttgtagttcacgcag |
5852605 |
T |
 |
| Q |
121 |
aggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacagtcgcctcatattgatgagattttggataagcttttgt |
220 |
Q |
| |
|
||||||||||||||| ||||||| || |||| |||||||| | ||||| | |||||||||||| |||| || ||| | |||||||||| || ||||||| |
|
|
| T |
5852604 |
tggcaacaaagcattgctccattcctgcccctcagatgttagagttatatcttctagatacagttgcctaatcttggtcagattttggacaaacttttgt |
5852505 |
T |
 |
| Q |
221 |
aaattt |
226 |
Q |
| |
|
| |||| |
|
|
| T |
5852504 |
agattt |
5852499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 5583041 - 5582866
Alignment:
| Q |
8 |
aaattattctcaccaagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttctt |
107 |
Q |
| |
|
||||| ||| || |||||||||||||||||||||||| |||| ||| ||||||||| |||| || |||||||||| ||| | |||||| |||| | ||| |
|
|
| T |
5583041 |
aaattgttcccatcaagaataatgactgataggttctttagtcttgttagggaagaatcaaggggacctgatagatcacaataagacatactcaatactt |
5582942 |
T |
 |
| Q |
108 |
gtaggtcgctcaaaggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacag |
183 |
Q |
| |
|
| |||| || |||||||||||||| ||||||| |||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
5582941 |
ggaggttaggcaggggcaacaaagcattcctccattcttgtccctgagcttttatacttacaccatctagatacag |
5582866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 183
Target Start/End: Complemental strand, 5570821 - 5570659
Alignment:
| Q |
21 |
caagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaa |
120 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||| |||||||||| ||| || |||||||||| ||| | |||||| |||| | |||| |||| | || |
|
|
| T |
5570821 |
caagaataatgactgataggttctttagtcttgttagggaagaagaaaggggtcctgatagatcacaataagacatactcaatacttggaggttacgcag |
5570722 |
T |
 |
| Q |
121 |
aggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagatacag |
183 |
Q |
| |
|
|| |||||||||| ||||||| |||||||||| | ||| ||||| ||||||||||||||| |
|
|
| T |
5570721 |
cggaaacaaagcatcactccattcttgtccctgagcttttaaacttacaccatctagatacag |
5570659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 5559765 - 5559830
Alignment:
| Q |
253 |
agaagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaa |
318 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
5559765 |
agaagagagatcaagagtaaccaaccttttgagctgagaaatctctacaggaatttgccccacaaa |
5559830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 5570568 - 5570503
Alignment:
| Q |
253 |
agaagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaa |
318 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||| ||||||||||| | ||| ||||||||||| |
|
|
| T |
5570568 |
agaagagagatcaagagtaaccaaccttgtaagctgagaaatctctatagaaatatgccccacaaa |
5570503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 5559518 - 5559679
Alignment:
| Q |
21 |
caagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaa |
120 |
Q |
| |
|
|||||||||||| |||| |||| |||| |||| || || ||| |||| || |||| || ||| |||||||||||| ||||||||| ||| | | ||| |
|
|
| T |
5559518 |
caagaataatgatcgataaattctttagtcttgacagagatgaatcaaggggtcctgttaaattgcagttagacatggtcagttcttctagaccacgcaa |
5559617 |
T |
 |
| Q |
121 |
aggcaacaaagcattgatccattcatgtccctgagatgttatacttataccatctagataca |
182 |
Q |
| |
|
||||||||||||||| |||||||||| || | | ||||||| ||| |||||| ||||||| |
|
|
| T |
5559618 |
cggcaacaaagcattgctccattcatgcccttttgctgttataattacaccatccagataca |
5559679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 5538956 - 5538832
Alignment:
| Q |
23 |
agaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaaag |
122 |
Q |
| |
|
|||||||||| ||||| ||||||||| |||| || || || ||||||| |||| || |||||||||||||||| ||||||||| ||| | || | |
|
|
| T |
5538956 |
agaataatgatcgatagattctctagtcttgacagagatgattcaagaggtcctgttaaattacagttagacatggtcagttcttctagaccatgtaacg |
5538857 |
T |
 |
| Q |
123 |
gcaacaaagcattgatccattcatg |
147 |
Q |
| |
|
|||||||||||||| |||||||||| |
|
|
| T |
5538856 |
gcaacaaagcattgctccattcatg |
5538832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 5582768 - 5582713
Alignment:
| Q |
263 |
tcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaa |
318 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||| ||||| ||||||||||| |
|
|
| T |
5582768 |
tcaagagtaaccaaccttgtaagctgagaaatctctataggaatttgccccacaaa |
5582713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 5858820 - 5858875
Alignment:
| Q |
253 |
agaagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatct |
308 |
Q |
| |
|
|||||||| |||||||||||||||||| | ||||||||||| ||||||||||||| |
|
|
| T |
5858820 |
agaagagatatcaagagtaaccaaccttataagctgggaaatttctattggaatct |
5858875 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 3749711 - 3749773
Alignment:
| Q |
256 |
agagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaa |
318 |
Q |
| |
|
||||||||||||| |||||||||| || ||||| |||||||| || ||||||||||| ||||| |
|
|
| T |
3749711 |
agagagatcaagaataaccaaccttgtaagctgcgaaatctcaatcggaatctgccctacaaa |
3749773 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 5885760 - 5885702
Alignment:
| Q |
255 |
aagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgcccc |
313 |
Q |
| |
|
|||||| |||||||||||||||||| || || ||||||||||| |||||||||| |||| |
|
|
| T |
5885760 |
aagagatatcaagagtaaccaaccttgtaagatgggaaatctcaattggaatctccccc |
5885702 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 318
Target Start/End: Complemental strand, 5538711 - 5538646
Alignment:
| Q |
253 |
agaagagagatcaagagtaaccaacctcgtgagctgggaaatctctattggaatctgccccacaaa |
318 |
Q |
| |
|
|||||||| ||| ||||| |||||||| || ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
5538711 |
agaagagatatctagagttaccaaccttgtaagctgagaaatctctaaaggaatctgccccacaaa |
5538646 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0454 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0454
Description:
Target: scaffold0454; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 945 - 1074
Alignment:
| Q |
21 |
caagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaa |
120 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||| ||| ||| || ||||||||| |||| || |||||||| |||| || || | || |
|
|
| T |
945 |
caagaataatgatggttaggttctctagttttgaaagggaggaatcaacgggtcctgatagactacaattgctcatgctcaacacttgcagctcacgcag |
1044 |
T |
 |
| Q |
121 |
aggcaacaaagcattgatccattcatgtcc |
150 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |
|
|
| T |
1045 |
cggcaacaaggcattgctccattcatgtcc |
1074 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 1485763 - 1485892
Alignment:
| Q |
21 |
caagaataatgactgataggttctctagttttgaaagggaagaagcaagaggccctgatagattacagttagacatgctcagttcttgtaggtcgctcaa |
120 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||| ||| ||| || ||||||||| |||| || |||||||| |||| || || | || |
|
|
| T |
1485763 |
caagaataatgatggttaggttctctagttttgaaagggaggaatcaacgggtcctgatagactacaattgctcatgctcaacacttgcagctcacgcag |
1485862 |
T |
 |
| Q |
121 |
aggcaacaaagcattgatccattcatgtcc |
150 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |
|
|
| T |
1485863 |
cggcaacaaggcattgctccattcatgtcc |
1485892 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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