View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18674_high_89 (Length: 234)
Name: NF18674_high_89
Description: NF18674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18674_high_89 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 32530917 - 32530696
Alignment:
| Q |
1 |
cggcacagttctccgcttagcgaaagatcttgctgagaataacaaaaatgcaagagttcttgttgtttgttctgaaatcactgcagttactttccgtggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32530917 |
cggcacagttctccgcttagcgaaagatcttgctgagaataacaaaaatgcaagagttcttgttgtttgttctgaaatcactgcagttactttccgtggt |
32530818 |
T |
|
| Q |
101 |
ccatcagatactcatttagattcacttgtaggacaggcgctcttcggtgatggagccgcagcaatgattattggtgcggatccagatttaaccgtggagc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32530817 |
ccatcagatactcatttagattcacttgtaggacaggcgctcttcggtgatggagccgcagcaatgattattggtgcggatccagatttaaccgtggagc |
32530718 |
T |
|
| Q |
201 |
gtccgatttttgagattgtctc |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
32530717 |
gtccgatttttgagattgtctc |
32530696 |
T |
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